Clc03G03540 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc03G03540
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Pectate lyase
Location	ClcChr03: 3592539 .. 3595168 (+)
RNA-Seq Expression	Clc03G03540
Synteny	Clc03G03540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

cgaaatcaacccccaacacttgagggtcccacatgtttagtttaattcttgtttagtttaatcacacaattaatccctccttcttctcaccttaatctctttatatactccttcttcttcctctgttttttctcacatctctcactccttcattttttccactcacaaatggcaccgcctacagtccctctctctctcctctccctcttcctcttctccgtctctctatccgccgctctctccgctgcccctgccgccgttcccaaccctgaactcgtcgtacaagaagtacacaggtaaaaaacacacacacaaacattcccattactctgttttttttttttttttccgttcttgttttgaaaatgtgcgtgtcattttggatttacagaagcataatcaatgcgacgaagaggaggaatttagggtatctctcatgtgggactggaaatccaatcgacgattgctggcggtgcgatcccaattgggagaaaaatcgtcagagactagccgactgtgggattggattcggcaaaaacgccattggcggtcgcgacggccaaatctacgtcgtcactgactccggcgacgatgatccagttaaccctaaaccaggaactctccgttacgccgtaatccaagatgaacccctctggatcatcttcgctcgcgatatggtgattcgattgaaagaagaactgattatgaattccttcaaaaccatcgacggccgtggcgctagcgtccatatcgccggtgggccttgcattaccattcagtacgtgacaaacattataatccatggtctcaacattcacgactgtaagccagggggaaacacggacgtgagagattcccctcgacatttcggattcagaaccatatcggacggggacggcgtttcgatcttcggcggcagccatgtttgggttgatcattgctctttatcaaactgtaacgatggattgatcgacgccattcatgggtctactgcgattacgatttcgaacaattacatgacgcatcatgataaagtgatgttgttggggcacagtgattcgtacactcaggacaagaatatgcaagttaccattgctttcaaccattttggtgaaggtcttgttcaaagaatgcccaggtaaatttatgaacaaaatattcgaatctcattttctctgtgtttgtttgttgtgttcttgaaattgagattggaattttgggggattttgttttgatttgcagatgcagacatgggtattttcatgtggtgaacaacgactatacgcattgggaaatgtacgccattggaggaagtgctgctccaactatcaacagtcaagggaacagatttgttgcaccggatgacagattcagcaaagaggtaagaagataaataatacacaaacaatacgcaatacctttttttaagggttgatttgtgtttatttgatatttttaaaatattgtttaattacttctcgaacttttcgttaaatctacgtagagccagaattttatagattaaaaggatttttatgagattttatctaacatttgtaattttacattaacttttaattttttgtttaatcaatcatgaattttcaattttatatggaatgtatcacttaattttttaaatatttctaaaatctattagatatttttagggttcaaatatcaaataaacatagatatgaggagatgtttagtgaaagaagtaggagttggagagtaaaattgttttgtttgaagcgtttgttgaccatatgactataaaacatcacttggtaaggttagacaatgtgatagagttgaggtgctaaaagttcaaatagaaaaaaagttgagggactaagtttgtaattccattatttgattgtgataggtaaaacgtagggttatattgtggatttgtgatgtttatggattttggtgaatggcaggtgacaaaatatgaggatgcaccggagagtgagtggaagaattggcattggagatcagaaggagatctgatgctaaacggtgcatttttcactgcctccggcgccggagcgtcgtcaagttacgctagagcatcgagtttaggggcgagaccgtcgtcgctcgtcggtacaattacaacaaatgcgggtgcactgaactgcaggaagggctcccgctgctgattattactcctacccaatttgaaacgaagaaaaaaatgaactgaaatttgaaagtctagtagctagttctagttggttggttgattttcataaaagttaaaaattattgattttatgaaatggtaatttgagggaaaatcagtaggaaatggagggaaagtaaaaagaggaagaaaaagaaaagagagctgagaaaagacactgaaccaatagggtcagtcaatctgcttctatcagtattatctttttttagccttttctttttctccttccattttattttttgttttttttttgttggttttgggttgtttttataattattacaatgtacaacctccgcatgtaattcttgaaaccattggggctttccttttaagaaccttaatggtctcaaatcaagtcaaatgcagaagagttgatatttgatatactaattcctctctctttacttccattcta

mRNA sequence

cgaaatcaacccccaacacttgagggtcccacatgtttagtttaattcttgtttagtttaatcacacaattaatccctccttcttctcaccttaatctctttatatactccttcttcttcctctgttttttctcacatctctcactccttcattttttccactcacaaatggcaccgcctacagtccctctctctctcctctccctcttcctcttctccgtctctctatccgccgctctctccgctgcccctgccgccgttcccaaccctgaactcgtcgtacaagaagtacacagaagcataatcaatgcgacgaagaggaggaatttagggtatctctcatgtgggactggaaatccaatcgacgattgctggcggtgcgatcccaattgggagaaaaatcgtcagagactagccgactgtgggattggattcggcaaaaacgccattggcggtcgcgacggccaaatctacgtcgtcactgactccggcgacgatgatccagttaaccctaaaccaggaactctccgttacgccgtaatccaagatgaacccctctggatcatcttcgctcgcgatatggtgattcgattgaaagaagaactgattatgaattccttcaaaaccatcgacggccgtggcgctagcgtccatatcgccggtgggccttgcattaccattcagtacgtgacaaacattataatccatggtctcaacattcacgactgtaagccagggggaaacacggacgtgagagattcccctcgacatttcggattcagaaccatatcggacggggacggcgtttcgatcttcggcggcagccatgtttgggttgatcattgctctttatcaaactgtaacgatggattgatcgacgccattcatgggtctactgcgattacgatttcgaacaattacatgacgcatcatgataaagtgatgttgttggggcacagtgattcgtacactcaggacaagaatatgcaagttaccattgctttcaaccattttggtgaaggtcttgttcaaagaatgcccagatgcagacatgggtattttcatgtggtgaacaacgactatacgcattgggaaatgtacgccattggaggaagtgctgctccaactatcaacagtcaagggaacagatttgttgcaccggatgacagattcagcaaagaggtgacaaaatatgaggatgcaccggagagtgagtggaagaattggcattggagatcagaaggagatctgatgctaaacggtgcatttttcactgcctccggcgccggagcgtcgtcaagttacgctagagcatcgagtttaggggcgagaccgtcgtcgctcgtcggtacaattacaacaaatgcgggtgcactgaactgcaggaagggctcccgctgctgattattactcctacccaatttgaaacgaagaaaaaaatgaactgaaatttgaaagtctagtagctagttctagttggttggttgattttcataaaagttaaaaattattgattttatgaaatggtaatttgagggaaaatcagtaggaaatggagggaaagtaaaaagaggaagaaaaagaaaagagagctgagaaaagacactgaaccaatagggtcagtcaatctgcttctatcagtattatctttttttagccttttctttttctccttccattttattttttgttttttttttgttggttttgggttgtttttataattattacaatgtacaacctccgcatgtaattcttgaaaccattggggctttccttttaagaaccttaatggtctcaaatcaagtcaaatgcagaagagttgatatttgatatactaattcctctctctttacttccattcta

Coding sequence (CDS)

atggcaccgcctacagtccctctctctctcctctccctcttcctcttctccgtctctctatccgccgctctctccgctgcccctgccgccgttcccaaccctgaactcgtcgtacaagaagtacacagaagcataatcaatgcgacgaagaggaggaatttagggtatctctcatgtgggactggaaatccaatcgacgattgctggcggtgcgatcccaattgggagaaaaatcgtcagagactagccgactgtgggattggattcggcaaaaacgccattggcggtcgcgacggccaaatctacgtcgtcactgactccggcgacgatgatccagttaaccctaaaccaggaactctccgttacgccgtaatccaagatgaacccctctggatcatcttcgctcgcgatatggtgattcgattgaaagaagaactgattatgaattccttcaaaaccatcgacggccgtggcgctagcgtccatatcgccggtgggccttgcattaccattcagtacgtgacaaacattataatccatggtctcaacattcacgactgtaagccagggggaaacacggacgtgagagattcccctcgacatttcggattcagaaccatatcggacggggacggcgtttcgatcttcggcggcagccatgtttgggttgatcattgctctttatcaaactgtaacgatggattgatcgacgccattcatgggtctactgcgattacgatttcgaacaattacatgacgcatcatgataaagtgatgttgttggggcacagtgattcgtacactcaggacaagaatatgcaagttaccattgctttcaaccattttggtgaaggtcttgttcaaagaatgcccagatgcagacatgggtattttcatgtggtgaacaacgactatacgcattgggaaatgtacgccattggaggaagtgctgctccaactatcaacagtcaagggaacagatttgttgcaccggatgacagattcagcaaagaggtgacaaaatatgaggatgcaccggagagtgagtggaagaattggcattggagatcagaaggagatctgatgctaaacggtgcatttttcactgcctccggcgccggagcgtcgtcaagttacgctagagcatcgagtttaggggcgagaccgtcgtcgctcgtcggtacaattacaacaaatgcgggtgcactgaactgcaggaagggctcccgctgctga

Protein sequence

MAPPTVPLSLLSLFLFSVSLSAALSAAPAAVPNPELVVQEVHRSIINATKRRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC

Homology

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BLAST of Clc03G03540 vs. NCBI nr
Match: XP_038895410.1 (probable pectate lyase 22 [Benincasa hispida])

HSP 1 Score: 838.6 bits (2165), Expect = 2.4e-239
Identity = 402/411 (97.81%), Postives = 408/411 (99.27%), Query Frame = 0


Query: 1   MAPPTVPLSLLSLFLFSVSLSAALSAAPAAVPNPELVVQEVHRSIINATKRRNLGYLSCG 60
           MAPPTVPLSLLSLFLFSVSLSAA+SAAPAAVPNPELVV EVHRSIINATKRRNLGYLSCG
Sbjct: 1   MAPPTVPLSLLSLFLFSVSLSAAISAAPAAVPNPELVVDEVHRSIINATKRRNLGYLSCG 60

Query: 61  TGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTL 120
           TGNPIDDCWRCD NW KNRQRLADCGIGFGKNAIGGRDGQIYVVTD+GDDDPVNPKPGTL
Sbjct: 61  TGNPIDDCWRCDSNWVKNRQRLADCGIGFGKNAIGGRDGQIYVVTDAGDDDPVNPKPGTL 120

Query: 121 RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180
           RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH
Sbjct: 121 RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180

Query: 181 GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240
           GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDG+SIFGGSHVWVDHCSLSNCNDGLIDAIH
Sbjct: 181 GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGISIFGGSHVWVDHCSLSNCNDGLIDAIH 240

Query: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300
           GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV
Sbjct: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300

Query: 301 VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGD 360
           VNNDYTHWEMYAIGGSAAPTINSQGNRFVAP+DRFSKEVTKYEDAPESEW+NWHWRSEGD
Sbjct: 301 VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWRNWHWRSEGD 360

Query: 361 LMLNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           LMLNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNC+KGSRC
Sbjct: 361 LMLNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCKKGSRC 411

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BLAST of Clc03G03540 vs. NCBI nr
Match: XP_008439105.1 (PREDICTED: probable pectate lyase 22 [Cucumis melo] >KAA0055290.1 putative pectate lyase 22 [Cucumis melo var. makuwa] >TYJ99213.1 putative pectate lyase 22 [Cucumis melo var. makuwa])

HSP 1 Score: 837.4 bits (2162), Expect = 5.2e-239
Identity = 402/411 (97.81%), Postives = 409/411 (99.51%), Query Frame = 0


Query: 1   MAPPTVPLSLLSLFLFSVSLSAALSAAPAAVPNPELVVQEVHRSIINATKRRNLGYLSCG 60
           MAPPTVPLSLLSLFLFS+SLSAALS+APAAV +PELVVQEVHRSIINATKRRNLGYLSCG
Sbjct: 1   MAPPTVPLSLLSLFLFSISLSAALSSAPAAVSDPELVVQEVHRSIINATKRRNLGYLSCG 60

Query: 61  TGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTL 120
           TGNPIDDCWRCD NWEKNRQRLADCGIGFGKNAIGGRDG+IYVVTD+GDDDPVNPKPGTL
Sbjct: 61  TGNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDAGDDDPVNPKPGTL 120

Query: 121 RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180
           RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH
Sbjct: 121 RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180

Query: 181 GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240
           GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH
Sbjct: 181 GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240

Query: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300
           GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV
Sbjct: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300

Query: 301 VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGD 360
           VNNDYTHWEMYAIGGSAAPTINSQGNRFVAP+DRFSKEVTKYEDAPESEWKNWHWRSEGD
Sbjct: 301 VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWHWRSEGD 360

Query: 361 LMLNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           LMLNGAFFT+SGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC
Sbjct: 361 LMLNGAFFTSSGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 411

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BLAST of Clc03G03540 vs. NCBI nr
Match: XP_004152502.1 (probable pectate lyase 5 [Cucumis sativus] >KGN64357.1 hypothetical protein Csa_014078 [Cucumis sativus])

HSP 1 Score: 826.2 bits (2133), Expect = 1.2e-235
Identity = 400/413 (96.85%), Postives = 405/413 (98.06%), Query Frame = 0


Query: 1   MAPPTVPLSLLS--LFLFSVSLSAALSAAPAAVPNPELVVQEVHRSIINATKRRNLGYLS 60
           MAPP +PLSLLS  LFLFS+SLSAALS  PAAV NPELVVQEVHRSIINATKRRNLGYLS
Sbjct: 1   MAPPALPLSLLSLFLFLFSISLSAALSPNPAAVSNPELVVQEVHRSIINATKRRNLGYLS 60

Query: 61  CGTGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPG 120
           CGTGNPIDDCWRCD NWEKNRQRLADCGIGFGKNAIGGRDG+IYVVTDSGDDDPVNPKPG
Sbjct: 61  CGTGNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG 120

Query: 121 TLRYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNII 180
           TLRYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNII
Sbjct: 121 TLRYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNII 180

Query: 181 IHGLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDA 240
           IHGLNIHDCK GGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDA
Sbjct: 181 IHGLNIHDCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDA 240

Query: 241 IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF 300
           IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF
Sbjct: 241 IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF 300

Query: 301 HVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSE 360
           HVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAP+DRFSKEVTKYEDAPESEWKNWHWRSE
Sbjct: 301 HVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWHWRSE 360

Query: 361 GDLMLNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           GDLMLNGA+FTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC
Sbjct: 361 GDLMLNGAYFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 413

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BLAST of Clc03G03540 vs. NCBI nr
Match: XP_023519230.1 (probable pectate lyase 22 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 823.5 bits (2126), Expect = 7.8e-235
Identity = 397/411 (96.59%), Postives = 405/411 (98.54%), Query Frame = 0


Query: 1   MAPPTVPLSLLSLFLFSVSLSAALSAAPAAVPNPELVVQEVHRSIINATKRRNLGYLSCG 60
           MA PTV LSLLSLF  SVSLSAALSA+PAAVPNPELVV+EVHRSIINATKRRNLGYLSCG
Sbjct: 1   MALPTVVLSLLSLFFLSVSLSAALSASPAAVPNPELVVEEVHRSIINATKRRNLGYLSCG 60

Query: 61  TGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTL 120
           TGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTD+GDDDPVNPKPGTL
Sbjct: 61  TGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDAGDDDPVNPKPGTL 120

Query: 121 RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180
           RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH
Sbjct: 121 RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180

Query: 181 GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240
           GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH
Sbjct: 181 GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240

Query: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300
           GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV
Sbjct: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300

Query: 301 VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGD 360
           VNNDYTHWEMYAIGGSAAPTINSQGNRFVAP+DRFSKEVTKYEDAPESEWKNW+WRS GD
Sbjct: 301 VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWNWRSVGD 360

Query: 361 LMLNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           LM+NGAFFTASGA +SSSYARASSLGARPSSLVGTITTNAGAL+CRKGSRC
Sbjct: 361 LMVNGAFFTASGAESSSSYARASSLGARPSSLVGTITTNAGALSCRKGSRC 411

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BLAST of Clc03G03540 vs. NCBI nr
Match: XP_023001263.1 (probable pectate lyase 5 [Cucurbita maxima] >XP_023001264.1 probable pectate lyase 5 [Cucurbita maxima])

HSP 1 Score: 823.2 bits (2125), Expect = 1.0e-234
Identity = 395/411 (96.11%), Postives = 404/411 (98.30%), Query Frame = 0


Query: 1   MAPPTVPLSLLSLFLFSVSLSAALSAAPAAVPNPELVVQEVHRSIINATKRRNLGYLSCG 60
           MAPPT+ LSLLSLF  S SLSAALSA PAAVPNPELVVQEVHRSI+NATKRRNLGYLSCG
Sbjct: 1   MAPPTLTLSLLSLFFLSDSLSAALSAYPAAVPNPELVVQEVHRSIVNATKRRNLGYLSCG 60

Query: 61  TGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTL 120
           TGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTD+GDDDPVNPKPGTL
Sbjct: 61  TGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDAGDDDPVNPKPGTL 120

Query: 121 RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180
           RYAVIQDEPLW+IFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH
Sbjct: 121 RYAVIQDEPLWVIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180

Query: 181 GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240
           GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH
Sbjct: 181 GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240

Query: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300
           GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV
Sbjct: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300

Query: 301 VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGD 360
           VNNDYTHWEMYAIGGSAAPTINSQGNRFVAP+DRFSKEVTKYEDAPESEWKNW+WRS GD
Sbjct: 301 VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWNWRSVGD 360

Query: 361 LMLNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           LM+NGAFFTASGA +SSSYARASSLGARPSSLVGTITTNAGAL+CRKGSRC
Sbjct: 361 LMVNGAFFTASGAESSSSYARASSLGARPSSLVGTITTNAGALSCRKGSRC 411

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BLAST of Clc03G03540 vs. ExPASy Swiss-Prot
Match: Q93Z25 (Probable pectate lyase 22 OS=Arabidopsis thaliana OX=3702 GN=At5g63180 PE=2 SV=1)

HSP 1 Score: 690.3 bits (1780), Expect = 1.4e-197
Identity = 328/406 (80.79%), Postives = 362/406 (89.16%), Query Frame = 0


Query: 8   LSLLSLFLFSVSLSAALSAAPAAVPNPELVVQEVHRSIINATKRRNLGYLSCGTGNPIDD 67
           LS   +F   +  SA  S+ P  V +PELVV+EVHR I  +  RR LG+ SCG+GNPIDD
Sbjct: 29  LSFALIFFCCILFSALASSLP--VSDPELVVEEVHRKINESISRRKLGFFSCGSGNPIDD 88

Query: 68  CWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTLRYAVIQD 127
           CWRCD +WEKNR+RLADCGIGFGKNAIGGRDG+IYVVTD G+DDPVNP+PGTLRYAVIQD
Sbjct: 89  CWRCDKDWEKNRKRLADCGIGFGKNAIGGRDGEIYVVTDPGNDDPVNPRPGTLRYAVIQD 148

Query: 128 EPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDC 187
           EPLWIIF RDM I+LKEELIMNSFKT+DGRGASVHI+GGPCITIQYVTNIIIHGL+IHDC
Sbjct: 149 EPLWIIFKRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYVTNIIIHGLHIHDC 208

Query: 188 KPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITI 247
           K GGNT VRDSP H+G+RT+SDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAI GSTAITI
Sbjct: 209 KQGGNTYVRDSPEHYGYRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIRGSTAITI 268

Query: 248 SNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH 307
           SNNY+THH+KVMLLGHSD+Y QDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
Sbjct: 269 SNNYLTHHNKVMLLGHSDTYEQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH 328

Query: 308 WEMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAF 367
           WEMYAIGGSA PTINSQGNRF+APDD  SKEVTK+EDAPE EW+NW+WRSEGDL+LNGAF
Sbjct: 329 WEMYAIGGSANPTINSQGNRFLAPDDSSSKEVTKHEDAPEDEWRNWNWRSEGDLLLNGAF 388

Query: 368 FTASGAG--ASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           FT SGAG   SSSY++ASSL ARPSS VG IT  +GAL+C++GS C
Sbjct: 389 FTYSGAGPAKSSSYSKASSLAARPSSHVGEITIASGALSCKRGSHC 432

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BLAST of Clc03G03540 vs. ExPASy Swiss-Prot
Match: Q9C5M8 (Probable pectate lyase 18 OS=Arabidopsis thaliana OX=3702 GN=At4g24780 PE=2 SV=2)

HSP 1 Score: 689.1 bits (1777), Expect = 3.0e-197
Identity = 322/382 (84.29%), Postives = 355/382 (92.93%), Query Frame = 0


Query: 31  VPNPELVVQEVHRSI-INATKRRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCGIGF 90
           VP+PE VV+EVH+SI  +   RR LGYLSC TGNPIDDCWRCDP+WE++RQRLADC IGF
Sbjct: 27  VPDPESVVEEVHKSINASVAGRRKLGYLSCTTGNPIDDCWRCDPHWEQHRQRLADCAIGF 86

Query: 91  GKNAIGGRDGQIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVIRLKEELIMN 150
           GKNAIGGRDG+IYVVTDSG+D+PV+PKPGTLR+AV+QDEPLWIIF RDM I+LKEELIMN
Sbjct: 87  GKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEPLWIIFQRDMTIQLKEELIMN 146

Query: 151 SFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKPGGNTDVRDSPRHFGFRTISD 210
           SFKTIDGRGASVHI+GGPCITIQYVTNIIIHG++IHDCK GGN  VR SPRHFG+RTISD
Sbjct: 147 SFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHDCKQGGNAMVRSSPRHFGWRTISD 206

Query: 211 GDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQ 270
           GDGVSIFGGSHVWVDHCS SNC DGLIDAI GSTAIT+SNN+MTHHDKVMLLGHSD+Y++
Sbjct: 207 GDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSNNHMTHHDKVMLLGHSDTYSR 266

Query: 271 DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFV 330
           DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA PTINSQGNRF+
Sbjct: 267 DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFL 326

Query: 331 APDDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAFFTASGAGASSSYARASSLGARP 390
           AP+ RFSKEVTK+EDAPESEWK W+WRS GDL+LNGAFFT SG  ASSSYA+ASSLGA+P
Sbjct: 327 APNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGAFFTPSGGAASSSYAKASSLGAKP 386

Query: 391 SSLVGTITTNAGALNCRKGSRC 412
           SSLVG +T+ +GALNCRKGSRC
Sbjct: 387 SSLVGPLTSTSGALNCRKGSRC 408

[Close]

BLAST of Clc03G03540 vs. ExPASy Swiss-Prot
Match: Q9FXD8 (Probable pectate lyase 5 OS=Arabidopsis thaliana OX=3702 GN=At1g67750 PE=2 SV=2)

HSP 1 Score: 683.3 bits (1762), Expect = 1.7e-195
Identity = 334/403 (82.88%), Postives = 358/403 (88.83%), Query Frame = 0


Query: 11  LSLFLFSVSLSAALSAAPAAVP--NPELVVQEVHRSIINATKRRNLGYLSCGTGNPIDDC 70
           LSL LFS  L        A+ P   PELVVQEV+   INA+ RRNLG LSCGTGNPIDDC
Sbjct: 8   LSLSLFSCLLLVLSPTFIASTPVSEPELVVQEVNEK-INAS-RRNLGVLSCGTGNPIDDC 67

Query: 71  WRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTLRYAVIQDE 130
           WRCDP WEKNRQRLADC IGFGK+AIGGRDG+IYVVTDS D D VNPKPGTLR+AVIQDE
Sbjct: 68  WRCDPKWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSSDKDVVNPKPGTLRHAVIQDE 127

Query: 131 PLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCK 190
           PLWIIFARDMVI+LKEELIMNSFKTIDGRGASVHIAGG CIT+QYVTNIIIHG+NIHDCK
Sbjct: 128 PLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGACITVQYVTNIIIHGVNIHDCK 187

Query: 191 PGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITIS 250
             GN  VRDSP H+G+RT SDGD VSIFGGSHVWVDHCSLSNC DGLIDAIHGSTAITIS
Sbjct: 188 RKGNAYVRDSPSHYGWRTASDGDAVSIFGGSHVWVDHCSLSNCADGLIDAIHGSTAITIS 247

Query: 251 NNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 310
           NNY++HH+KVMLLGHSDSYT+DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW
Sbjct: 248 NNYLSHHNKVMLLGHSDSYTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 307

Query: 311 EMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAFF 370
           +MYAIGGSAAPTINSQGNRF+AP+D   KEVTKYEDAP S+WK W+WRSEGDL LNGAFF
Sbjct: 308 QMYAIGGSAAPTINSQGNRFLAPNDHVFKEVTKYEDAPRSKWKKWNWRSEGDLFLNGAFF 367

Query: 371 TASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           T SG GASSSYA+ASSL ARPSSLV ++T+NAGAL CRKGSRC
Sbjct: 368 TPSGGGASSSYAKASSLSARPSSLVASVTSNAGALFCRKGSRC 408

[Close]

BLAST of Clc03G03540 vs. ExPASy Swiss-Prot
Match: Q9LTZ0 (Putative pectate lyase 11 OS=Arabidopsis thaliana OX=3702 GN=At3g27400 PE=3 SV=2)

HSP 1 Score: 651.0 bits (1678), Expect = 9.1e-186
Identity = 306/400 (76.50%), Postives = 349/400 (87.25%), Query Frame = 0


Query: 13  LFLFSVSLSAALSAA-PAAVPNPELVVQEVHRSIINATKRRNLGYLSCGTGNPIDDCWRC 72
           L L ++  + A S++ P  V +P LVV +V+RS+ NA+ RR+L YLSC TGNPIDDCWRC
Sbjct: 14  LLLLTIGNTLAFSSSLPDHVQDPNLVVDDVNRSVFNAS-RRSLAYLSCRTGNPIDDCWRC 73

Query: 73  DPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLW 132
           DPNWE NRQRLADC IGFGKNAIGGR G+IYVVTD  +DDPVNP+PGTLRYAV Q+EPLW
Sbjct: 74  DPNWETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNPRPGTLRYAVTQEEPLW 133

Query: 133 IIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKPGG 192
           IIF RDMVIRLK+ELI+ SFKTIDGRG+SVHI  GPC+ I Y TNIIIHG+NIHDCKPG 
Sbjct: 134 IIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIIIHGINIHDCKPGS 193

Query: 193 NTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNY 252
              ++D P H G+   SDGD V+IFGG HVW+DHCSLSNC+DGLIDAIHGSTAITISNN+
Sbjct: 194 GGMIKDGPHHTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGLIDAIHGSTAITISNNH 253

Query: 253 MTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY 312
           MTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY
Sbjct: 254 MTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY 313

Query: 313 AIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAFFTAS 372
           AIGGSA+PTI SQGNRF+AP+ RF+KEVTK+EDAPES+W++W+WRSEGD++LNGA+F  S
Sbjct: 314 AIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNWRSEGDMLLNGAYFRES 373

Query: 373 GAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           GA A S+YARASSL ARPSSLVG+ITT AG L+CR+G RC
Sbjct: 374 GAEAPSTYARASSLSARPSSLVGSITTTAGTLSCRRGRRC 412

[Close]

BLAST of Clc03G03540 vs. ExPASy Swiss-Prot
Match: O24554 (Pectate lyase OS=Zinnia violacea OX=34245 PE=1 SV=1)

HSP 1 Score: 647.5 bits (1669), Expect = 1.0e-184
Identity = 310/403 (76.92%), Postives = 353/403 (87.59%), Query Frame = 0


Query: 9   SLLSLFLFSVSLSAALSAAPAAVPNPELVVQEVHRSIINATKRRNLGYLSCGTGNPIDDC 68
           ++L L LF  SL+ A S++P+  P+   +V EVH+S INA+ RRNLGYLSCGTGNPIDDC
Sbjct: 4   TILPLILFISSLAIA-SSSPSRTPH--AIVNEVHKS-INAS-RRNLGYLSCGTGNPIDDC 63

Query: 69  WRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTLRYAVIQDE 128
           WRCDPNW  NRQRLADC IGFGKNA+GGR+G+IYVVTD G+DDPVNP PGTLRYAVIQDE
Sbjct: 64  WRCDPNWANNRQRLADCAIGFGKNAMGGRNGRIYVVTDPGNDDPVNPVPGTLRYAVIQDE 123

Query: 129 PLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCK 188
           PLWIIF RDMVI+L++EL+MNS KTIDGRG +VHI  GPCITI Y +NIIIHG++IHDCK
Sbjct: 124 PLWIIFKRDMVIQLRQELVMNSHKTIDGRGVNVHIGNGPCITIHYASNIIIHGIHIHDCK 183

Query: 189 PGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITIS 248
             GN ++R+SP H G+ T SDGDG+SIF    +W+DH SLSNC+DGLIDAIHGSTAITIS
Sbjct: 184 QAGNGNIRNSPHHSGWWTQSDGDGISIFASKDIWIDHNSLSNCHDGLIDAIHGSTAITIS 243

Query: 249 NNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 308
           NNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW
Sbjct: 244 NNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 303

Query: 309 EMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAFF 368
           EMYAIGGSA+PTI SQGNRF+AP+ RF KEVTK+E+APESEWKNW+WRSEGDLMLNGA+F
Sbjct: 304 EMYAIGGSASPTIYSQGNRFLAPNTRFDKEVTKHENAPESEWKNWNWRSEGDLMLNGAYF 363

Query: 369 TASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
             SG  A+SS+ARASSL  RPS+LV ++T +AGAL CRKGSRC
Sbjct: 364 RESGGRAASSFARASSLSGRPSTLVASMTRSAGALVCRKGSRC 401

[Close]

BLAST of Clc03G03540 vs. ExPASy TrEMBL
Match: A0A5A7UJC7 (Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004230 PE=3 SV=1)

HSP 1 Score: 837.4 bits (2162), Expect = 2.5e-239
Identity = 402/411 (97.81%), Postives = 409/411 (99.51%), Query Frame = 0


Query: 1   MAPPTVPLSLLSLFLFSVSLSAALSAAPAAVPNPELVVQEVHRSIINATKRRNLGYLSCG 60
           MAPPTVPLSLLSLFLFS+SLSAALS+APAAV +PELVVQEVHRSIINATKRRNLGYLSCG
Sbjct: 1   MAPPTVPLSLLSLFLFSISLSAALSSAPAAVSDPELVVQEVHRSIINATKRRNLGYLSCG 60

Query: 61  TGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTL 120
           TGNPIDDCWRCD NWEKNRQRLADCGIGFGKNAIGGRDG+IYVVTD+GDDDPVNPKPGTL
Sbjct: 61  TGNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDAGDDDPVNPKPGTL 120

Query: 121 RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180
           RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH
Sbjct: 121 RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180

Query: 181 GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240
           GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH
Sbjct: 181 GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240

Query: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300
           GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV
Sbjct: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300

Query: 301 VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGD 360
           VNNDYTHWEMYAIGGSAAPTINSQGNRFVAP+DRFSKEVTKYEDAPESEWKNWHWRSEGD
Sbjct: 301 VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWHWRSEGD 360

Query: 361 LMLNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           LMLNGAFFT+SGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC
Sbjct: 361 LMLNGAFFTSSGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 411

[Close]

BLAST of Clc03G03540 vs. ExPASy TrEMBL
Match: A0A1S3AY03 (Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103483993 PE=3 SV=1)

HSP 1 Score: 837.4 bits (2162), Expect = 2.5e-239
Identity = 402/411 (97.81%), Postives = 409/411 (99.51%), Query Frame = 0


Query: 1   MAPPTVPLSLLSLFLFSVSLSAALSAAPAAVPNPELVVQEVHRSIINATKRRNLGYLSCG 60
           MAPPTVPLSLLSLFLFS+SLSAALS+APAAV +PELVVQEVHRSIINATKRRNLGYLSCG
Sbjct: 1   MAPPTVPLSLLSLFLFSISLSAALSSAPAAVSDPELVVQEVHRSIINATKRRNLGYLSCG 60

Query: 61  TGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTL 120
           TGNPIDDCWRCD NWEKNRQRLADCGIGFGKNAIGGRDG+IYVVTD+GDDDPVNPKPGTL
Sbjct: 61  TGNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDAGDDDPVNPKPGTL 120

Query: 121 RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180
           RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH
Sbjct: 121 RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180

Query: 181 GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240
           GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH
Sbjct: 181 GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240

Query: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300
           GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV
Sbjct: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300

Query: 301 VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGD 360
           VNNDYTHWEMYAIGGSAAPTINSQGNRFVAP+DRFSKEVTKYEDAPESEWKNWHWRSEGD
Sbjct: 301 VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWHWRSEGD 360

Query: 361 LMLNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           LMLNGAFFT+SGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC
Sbjct: 361 LMLNGAFFTSSGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 411

[Close]

BLAST of Clc03G03540 vs. ExPASy TrEMBL
Match: A0A0A0LU82 (Pectate lyase OS=Cucumis sativus OX=3659 GN=Csa_1G049960 PE=3 SV=1)

HSP 1 Score: 826.2 bits (2133), Expect = 5.9e-236
Identity = 400/413 (96.85%), Postives = 405/413 (98.06%), Query Frame = 0


Query: 1   MAPPTVPLSLLS--LFLFSVSLSAALSAAPAAVPNPELVVQEVHRSIINATKRRNLGYLS 60
           MAPP +PLSLLS  LFLFS+SLSAALS  PAAV NPELVVQEVHRSIINATKRRNLGYLS
Sbjct: 1   MAPPALPLSLLSLFLFLFSISLSAALSPNPAAVSNPELVVQEVHRSIINATKRRNLGYLS 60

Query: 61  CGTGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPG 120
           CGTGNPIDDCWRCD NWEKNRQRLADCGIGFGKNAIGGRDG+IYVVTDSGDDDPVNPKPG
Sbjct: 61  CGTGNPIDDCWRCDSNWEKNRQRLADCGIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPG 120

Query: 121 TLRYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNII 180
           TLRYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNII
Sbjct: 121 TLRYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNII 180

Query: 181 IHGLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDA 240
           IHGLNIHDCK GGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDA
Sbjct: 181 IHGLNIHDCKQGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDA 240

Query: 241 IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF 300
           IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF
Sbjct: 241 IHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYF 300

Query: 301 HVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSE 360
           HVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAP+DRFSKEVTKYEDAPESEWKNWHWRSE
Sbjct: 301 HVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWHWRSE 360

Query: 361 GDLMLNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           GDLMLNGA+FTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC
Sbjct: 361 GDLMLNGAYFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 413

[Close]

BLAST of Clc03G03540 vs. ExPASy TrEMBL
Match: A0A6J1KM89 (Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111495447 PE=3 SV=1)

HSP 1 Score: 823.2 bits (2125), Expect = 5.0e-235
Identity = 395/411 (96.11%), Postives = 404/411 (98.30%), Query Frame = 0


Query: 1   MAPPTVPLSLLSLFLFSVSLSAALSAAPAAVPNPELVVQEVHRSIINATKRRNLGYLSCG 60
           MAPPT+ LSLLSLF  S SLSAALSA PAAVPNPELVVQEVHRSI+NATKRRNLGYLSCG
Sbjct: 1   MAPPTLTLSLLSLFFLSDSLSAALSAYPAAVPNPELVVQEVHRSIVNATKRRNLGYLSCG 60

Query: 61  TGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTL 120
           TGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTD+GDDDPVNPKPGTL
Sbjct: 61  TGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDAGDDDPVNPKPGTL 120

Query: 121 RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180
           RYAVIQDEPLW+IFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH
Sbjct: 121 RYAVIQDEPLWVIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180

Query: 181 GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240
           GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH
Sbjct: 181 GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240

Query: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300
           GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV
Sbjct: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300

Query: 301 VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGD 360
           VNNDYTHWEMYAIGGSAAPTINSQGNRFVAP+DRFSKEVTKYEDAPESEWKNW+WRS GD
Sbjct: 301 VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWNWRSVGD 360

Query: 361 LMLNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           LM+NGAFFTASGA +SSSYARASSLGARPSSLVGTITTNAGAL+CRKGSRC
Sbjct: 361 LMVNGAFFTASGAESSSSYARASSLGARPSSLVGTITTNAGALSCRKGSRC 411

[Close]

BLAST of Clc03G03540 vs. ExPASy TrEMBL
Match: A0A6J1EDH2 (Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111431534 PE=3 SV=1)

HSP 1 Score: 823.2 bits (2125), Expect = 5.0e-235
Identity = 395/411 (96.11%), Postives = 405/411 (98.54%), Query Frame = 0


Query: 1   MAPPTVPLSLLSLFLFSVSLSAALSAAPAAVPNPELVVQEVHRSIINATKRRNLGYLSCG 60
           MAPPTV LSLLSLF  SVSLSAALSA+PAAVPNPE+VV+EVHRSIINATKRRNLGYLSCG
Sbjct: 1   MAPPTVVLSLLSLFFLSVSLSAALSASPAAVPNPEIVVEEVHRSIINATKRRNLGYLSCG 60

Query: 61  TGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTL 120
           TGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDG+IYVVTD+GDDDPVNPKPGTL
Sbjct: 61  TGNPIDDCWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGRIYVVTDAGDDDPVNPKPGTL 120

Query: 121 RYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180
           RYAVIQDEPLWI FARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH
Sbjct: 121 RYAVIQDEPLWITFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIH 180

Query: 181 GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240
           GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH
Sbjct: 181 GLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIH 240

Query: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300
           GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV
Sbjct: 241 GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV 300

Query: 301 VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGD 360
           VNNDYTHWEMYAIGGSAAPTINSQGNRFVAP+DRFSKEVTKYEDAPESEWKNW+WRS GD
Sbjct: 301 VNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWKNWNWRSVGD 360

Query: 361 LMLNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           LM+NGAFFTASGA +SSSYARASSLGARPSSLVGTITTNAGAL+CRKGSRC
Sbjct: 361 LMVNGAFFTASGAESSSSYARASSLGARPSSLVGTITTNAGALSCRKGSRC 411

[Close]

BLAST of Clc03G03540 vs. TAIR 10
Match: AT5G63180.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 690.3 bits (1780), Expect = 9.7e-199
Identity = 328/406 (80.79%), Postives = 362/406 (89.16%), Query Frame = 0


Query: 8   LSLLSLFLFSVSLSAALSAAPAAVPNPELVVQEVHRSIINATKRRNLGYLSCGTGNPIDD 67
           LS   +F   +  SA  S+ P  V +PELVV+EVHR I  +  RR LG+ SCG+GNPIDD
Sbjct: 29  LSFALIFFCCILFSALASSLP--VSDPELVVEEVHRKINESISRRKLGFFSCGSGNPIDD 88

Query: 68  CWRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTLRYAVIQD 127
           CWRCD +WEKNR+RLADCGIGFGKNAIGGRDG+IYVVTD G+DDPVNP+PGTLRYAVIQD
Sbjct: 89  CWRCDKDWEKNRKRLADCGIGFGKNAIGGRDGEIYVVTDPGNDDPVNPRPGTLRYAVIQD 148

Query: 128 EPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDC 187
           EPLWIIF RDM I+LKEELIMNSFKT+DGRGASVHI+GGPCITIQYVTNIIIHGL+IHDC
Sbjct: 149 EPLWIIFKRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYVTNIIIHGLHIHDC 208

Query: 188 KPGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITI 247
           K GGNT VRDSP H+G+RT+SDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAI GSTAITI
Sbjct: 209 KQGGNTYVRDSPEHYGYRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIRGSTAITI 268

Query: 248 SNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH 307
           SNNY+THH+KVMLLGHSD+Y QDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
Sbjct: 269 SNNYLTHHNKVMLLGHSDTYEQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH 328

Query: 308 WEMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAF 367
           WEMYAIGGSA PTINSQGNRF+APDD  SKEVTK+EDAPE EW+NW+WRSEGDL+LNGAF
Sbjct: 329 WEMYAIGGSANPTINSQGNRFLAPDDSSSKEVTKHEDAPEDEWRNWNWRSEGDLLLNGAF 388

Query: 368 FTASGAG--ASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           FT SGAG   SSSY++ASSL ARPSS VG IT  +GAL+C++GS C
Sbjct: 389 FTYSGAGPAKSSSYSKASSLAARPSSHVGEITIASGALSCKRGSHC 432

[Close]

BLAST of Clc03G03540 vs. TAIR 10
Match: AT4G24780.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 689.1 bits (1777), Expect = 2.2e-198
Identity = 322/382 (84.29%), Postives = 355/382 (92.93%), Query Frame = 0


Query: 31  VPNPELVVQEVHRSI-INATKRRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCGIGF 90
           VP+PE VV+EVH+SI  +   RR LGYLSC TGNPIDDCWRCDP+WE++RQRLADC IGF
Sbjct: 27  VPDPESVVEEVHKSINASVAGRRKLGYLSCTTGNPIDDCWRCDPHWEQHRQRLADCAIGF 86

Query: 91  GKNAIGGRDGQIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVIRLKEELIMN 150
           GKNAIGGRDG+IYVVTDSG+D+PV+PKPGTLR+AV+QDEPLWIIF RDM I+LKEELIMN
Sbjct: 87  GKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEPLWIIFQRDMTIQLKEELIMN 146

Query: 151 SFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKPGGNTDVRDSPRHFGFRTISD 210
           SFKTIDGRGASVHI+GGPCITIQYVTNIIIHG++IHDCK GGN  VR SPRHFG+RTISD
Sbjct: 147 SFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHDCKQGGNAMVRSSPRHFGWRTISD 206

Query: 211 GDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQ 270
           GDGVSIFGGSHVWVDHCS SNC DGLIDAI GSTAIT+SNN+MTHHDKVMLLGHSD+Y++
Sbjct: 207 GDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSNNHMTHHDKVMLLGHSDTYSR 266

Query: 271 DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFV 330
           DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA PTINSQGNRF+
Sbjct: 267 DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFL 326

Query: 331 APDDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAFFTASGAGASSSYARASSLGARP 390
           AP+ RFSKEVTK+EDAPESEWK W+WRS GDL+LNGAFFT SG  ASSSYA+ASSLGA+P
Sbjct: 327 APNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGAFFTPSGGAASSSYAKASSLGAKP 386

Query: 391 SSLVGTITTNAGALNCRKGSRC 412
           SSLVG +T+ +GALNCRKGSRC
Sbjct: 387 SSLVGPLTSTSGALNCRKGSRC 408

[Close]

BLAST of Clc03G03540 vs. TAIR 10
Match: AT4G24780.2 (Pectin lyase-like superfamily protein )

HSP 1 Score: 689.1 bits (1777), Expect = 2.2e-198
Identity = 322/382 (84.29%), Postives = 355/382 (92.93%), Query Frame = 0


Query: 31  VPNPELVVQEVHRSI-INATKRRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCGIGF 90
           VP+PE VV+EVH+SI  +   RR LGYLSC TGNPIDDCWRCDP+WE++RQRLADC IGF
Sbjct: 27  VPDPESVVEEVHKSINASVAGRRKLGYLSCTTGNPIDDCWRCDPHWEQHRQRLADCAIGF 86

Query: 91  GKNAIGGRDGQIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVIRLKEELIMN 150
           GKNAIGGRDG+IYVVTDSG+D+PV+PKPGTLR+AV+QDEPLWIIF RDM I+LKEELIMN
Sbjct: 87  GKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEPLWIIFQRDMTIQLKEELIMN 146

Query: 151 SFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKPGGNTDVRDSPRHFGFRTISD 210
           SFKTIDGRGASVHI+GGPCITIQYVTNIIIHG++IHDCK GGN  VR SPRHFG+RTISD
Sbjct: 147 SFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHDCKQGGNAMVRSSPRHFGWRTISD 206

Query: 211 GDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQ 270
           GDGVSIFGGSHVWVDHCS SNC DGLIDAI GSTAIT+SNN+MTHHDKVMLLGHSD+Y++
Sbjct: 207 GDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSNNHMTHHDKVMLLGHSDTYSR 266

Query: 271 DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFV 330
           DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSA PTINSQGNRF+
Sbjct: 267 DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFL 326

Query: 331 APDDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAFFTASGAGASSSYARASSLGARP 390
           AP+ RFSKEVTK+EDAPESEWK W+WRS GDL+LNGAFFT SG  ASSSYA+ASSLGA+P
Sbjct: 327 APNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGAFFTPSGGAASSSYAKASSLGAKP 386

Query: 391 SSLVGTITTNAGALNCRKGSRC 412
           SSLVG +T+ +GALNCRKGSRC
Sbjct: 387 SSLVGPLTSTSGALNCRKGSRC 408

[Close]

BLAST of Clc03G03540 vs. TAIR 10
Match: AT1G67750.1 (Pectate lyase family protein )

HSP 1 Score: 683.3 bits (1762), Expect = 1.2e-196
Identity = 334/403 (82.88%), Postives = 358/403 (88.83%), Query Frame = 0


Query: 11  LSLFLFSVSLSAALSAAPAAVP--NPELVVQEVHRSIINATKRRNLGYLSCGTGNPIDDC 70
           LSL LFS  L        A+ P   PELVVQEV+   INA+ RRNLG LSCGTGNPIDDC
Sbjct: 8   LSLSLFSCLLLVLSPTFIASTPVSEPELVVQEVNEK-INAS-RRNLGVLSCGTGNPIDDC 67

Query: 71  WRCDPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTLRYAVIQDE 130
           WRCDP WEKNRQRLADC IGFGK+AIGGRDG+IYVVTDS D D VNPKPGTLR+AVIQDE
Sbjct: 68  WRCDPKWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSSDKDVVNPKPGTLRHAVIQDE 127

Query: 131 PLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCK 190
           PLWIIFARDMVI+LKEELIMNSFKTIDGRGASVHIAGG CIT+QYVTNIIIHG+NIHDCK
Sbjct: 128 PLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGACITVQYVTNIIIHGVNIHDCK 187

Query: 191 PGGNTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITIS 250
             GN  VRDSP H+G+RT SDGD VSIFGGSHVWVDHCSLSNC DGLIDAIHGSTAITIS
Sbjct: 188 RKGNAYVRDSPSHYGWRTASDGDAVSIFGGSHVWVDHCSLSNCADGLIDAIHGSTAITIS 247

Query: 251 NNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 310
           NNY++HH+KVMLLGHSDSYT+DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW
Sbjct: 248 NNYLSHHNKVMLLGHSDSYTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 307

Query: 311 EMYAIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAFF 370
           +MYAIGGSAAPTINSQGNRF+AP+D   KEVTKYEDAP S+WK W+WRSEGDL LNGAFF
Sbjct: 308 QMYAIGGSAAPTINSQGNRFLAPNDHVFKEVTKYEDAPRSKWKKWNWRSEGDLFLNGAFF 367

Query: 371 TASGAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           T SG GASSSYA+ASSL ARPSSLV ++T+NAGAL CRKGSRC
Sbjct: 368 TPSGGGASSSYAKASSLSARPSSLVASVTSNAGALFCRKGSRC 408

[Close]

BLAST of Clc03G03540 vs. TAIR 10
Match: AT3G27400.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 651.0 bits (1678), Expect = 6.5e-187
Identity = 306/400 (76.50%), Postives = 349/400 (87.25%), Query Frame = 0


Query: 13  LFLFSVSLSAALSAA-PAAVPNPELVVQEVHRSIINATKRRNLGYLSCGTGNPIDDCWRC 72
           L L ++  + A S++ P  V +P LVV +V+RS+ NA+ RR+L YLSC TGNPIDDCWRC
Sbjct: 14  LLLLTIGNTLAFSSSLPDHVQDPNLVVDDVNRSVFNAS-RRSLAYLSCRTGNPIDDCWRC 73

Query: 73  DPNWEKNRQRLADCGIGFGKNAIGGRDGQIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLW 132
           DPNWE NRQRLADC IGFGKNAIGGR G+IYVVTD  +DDPVNP+PGTLRYAV Q+EPLW
Sbjct: 74  DPNWETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNPRPGTLRYAVTQEEPLW 133

Query: 133 IIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKPGG 192
           IIF RDMVIRLK+ELI+ SFKTIDGRG+SVHI  GPC+ I Y TNIIIHG+NIHDCKPG 
Sbjct: 134 IIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIIIHGINIHDCKPGS 193

Query: 193 NTDVRDSPRHFGFRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNY 252
              ++D P H G+   SDGD V+IFGG HVW+DHCSLSNC+DGLIDAIHGSTAITISNN+
Sbjct: 194 GGMIKDGPHHTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGLIDAIHGSTAITISNNH 253

Query: 253 MTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY 312
           MTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY
Sbjct: 254 MTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY 313

Query: 313 AIGGSAAPTINSQGNRFVAPDDRFSKEVTKYEDAPESEWKNWHWRSEGDLMLNGAFFTAS 372
           AIGGSA+PTI SQGNRF+AP+ RF+KEVTK+EDAPES+W++W+WRSEGD++LNGA+F  S
Sbjct: 314 AIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNWRSEGDMLLNGAYFRES 373

Query: 373 GAGASSSYARASSLGARPSSLVGTITTNAGALNCRKGSRC 412
           GA A S+YARASSL ARPSSLVG+ITT AG L+CR+G RC
Sbjct: 374 GAEAPSTYARASSLSARPSSLVGSITTTAGTLSCRRGRRC 412

The following BLAST results are available for this feature:

BLAST of Clc03G03540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895410.1	2.4e-239	97.81	probable pectate lyase 22 [Benincasa hispida]	[more]
XP_008439105.1	5.2e-239	97.81	PREDICTED: probable pectate lyase 22 [Cucumis melo] >KAA0055290.1 putative pecta...	[more]
XP_004152502.1	1.2e-235	96.85	probable pectate lyase 5 [Cucumis sativus] >KGN64357.1 hypothetical protein Csa_...	[more]
XP_023519230.1	7.8e-235	96.59	probable pectate lyase 22 [Cucurbita pepo subsp. pepo]	[more]
XP_023001263.1	1.0e-234	96.11	probable pectate lyase 5 [Cucurbita maxima] >XP_023001264.1 probable pectate lya...	[more]

BLAST of Clc03G03540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93Z25	1.4e-197	80.79	Probable pectate lyase 22 OS=Arabidopsis thaliana OX=3702 GN=At5g63180 PE=2 SV=1	[more]
Q9C5M8	3.0e-197	84.29	Probable pectate lyase 18 OS=Arabidopsis thaliana OX=3702 GN=At4g24780 PE=2 SV=2	[more]
Q9FXD8	1.7e-195	82.88	Probable pectate lyase 5 OS=Arabidopsis thaliana OX=3702 GN=At1g67750 PE=2 SV=2	[more]
Q9LTZ0	9.1e-186	76.50	Putative pectate lyase 11 OS=Arabidopsis thaliana OX=3702 GN=At3g27400 PE=3 SV=2	[more]
O24554	1.0e-184	76.92	Pectate lyase OS=Zinnia violacea OX=34245 PE=1 SV=1	[more]

BLAST of Clc03G03540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UJC7	2.5e-239	97.81	Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004230...	[more]
A0A1S3AY03	2.5e-239	97.81	Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103483993 PE=3 SV=1	[more]
A0A0A0LU82	5.9e-236	96.85	Pectate lyase OS=Cucumis sativus OX=3659 GN=Csa_1G049960 PE=3 SV=1	[more]
A0A6J1KM89	5.0e-235	96.11	Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111495447 PE=3 SV=1	[more]
A0A6J1EDH2	5.0e-235	96.11	Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111431534 PE=3 SV=1	[more]

BLAST of Clc03G03540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G63180.1	9.7e-199	80.79	Pectin lyase-like superfamily protein	[more]
AT4G24780.1	2.2e-198	84.29	Pectin lyase-like superfamily protein	[more]
AT4G24780.2	2.2e-198	84.29	Pectin lyase-like superfamily protein	[more]
AT1G67750.1	1.2e-196	82.88	Pectate lyase family protein	[more]
AT3G27400.1	6.5e-187	76.50	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018082	AmbAllergen	PRINTS	PR00807	AMBALLERGEN	coord: 85..102 score: 56.61 coord: 382..405 score: 40.48 coord: 289..308 score: 78.1 coord: 353..377 score: 51.43 coord: 209..230 score: 56.71 coord: 311..330 score: 78.57 coord: 109..134 score: 72.71 coord: 145..161 score: 71.99
IPR002022	Pectate lyase	SMART	SM00656	amb_all	coord: 137..334 e-value: 8.6E-103 score: 357.5
IPR002022	Pectate lyase	PFAM	PF00544	Pectate_lyase_4	coord: 147..328 e-value: 5.2E-21 score: 75.2
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 62..404 e-value: 2.4E-119 score: 400.4
None	No IPR available	PANTHER	PTHR31683:SF165	PECTATE LYASE	coord: 13..408
IPR045032	Pectin lyase family	PANTHER	PTHR31683	PECTATE LYASE 18-RELATED	coord: 13..408
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 38..406

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc03G03540.1	Clc03G03540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045490	pectin catabolic process
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0030570	pectate lyase activity