Clc03G03190 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc03G03190
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	formin-like protein 5
Location	ClcChr03: 3248960 .. 3250001 (-)
RNA-Seq Expression	Clc03G03190
Synteny	Clc03G03190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTCAATTAGTTCTAATGTGTTTTTTGGAGCATCTGCTCTCATACTCCTCGGGTTGTACTTTGGAATCCATCAAACAAATGCTAAAAATGATTTCGTAGTTGATAAAGACATGTCTGTTCTGGAAAATGAATTGAGAGATCACATCATAAAGCATCCAAAAAGTCATATCCATTTCTCTATCCTAAAACACAAGAGAATACTTGACTTAGCTCCACCTTTCAGCTTGGGAATACTATCGAAAGACGTACGTACTCCATCATTTGAGCCGAGTCAAAGAACTTCAGACAATCCACCTCCCCCACTGCATGTTTTATCTAGGATTAACTTCGGAATATTACCAAAAGGTGTTCATATTCCTCAGTCTACGCCAAGTCAAAGAACTTCAGAGTCTCCACTTCTCCCACCGCATGTCCCATCTAGGATTACCTTTGGAATTTTACCAAAAGGTGTTCGTATTCCTTCGTCTGGACCGAGTCAAAGAACTTCAGACAATCCACCTCCCCCACTGCATGTTCCATCTAGGATTAACTTCAGAATATTACCAAACGGTGTTCATATTCCTCCGTCTGGGCCAAGTCAAAGAACTTCAAACTCTCCACTTCTCCCACCGCATGTCTCATCTAGGATTACCTTTGGAATATTACCAAAAGGTGTTCGTATTCCTCCATCTGGACCGAGTCAAAGAACTTCAGACTATCCACCTCCCCCACAACATCTCACCTCCTTCATTCTACATAAAGAATCGAGCATCAACTTTGGGATATTACCAAAAGGTATGCGTATTCCTCCATCTGGGCCGAGTACAAGAACCTCAGATTATCCACCTCCTCCACCGCATGCTCCTATTATATGAAAAAAAAATCTAAATTTAATTTTGCGATGTATCCTGAAGCACCTATTATTCACTCTCTACTTCAACTAGAAAGATCCCATCATGAGGACCTCATCAACCCCAATTTTCATCGCAATCTCGGTCTTGTTATTGCTTTTAAAACAAGTGTTGTGACTATATTTTAAGTCAACCTAGTCCAATTTCG

mRNA sequence

ATGGTGTCAATTAGTTCTAATGTGTTTTTTGGAGCATCTGCTCTCATACTCCTCGGGTTGTACTTTGGAATCCATCAAACAAATGCTAAAAATGATTTCGTAGTTGATAAAGACATGTCTGTTCTGGAAAATGAATTGAGAGATCACATCATAAAGCATCCAAAAAGTCATATCCATTTCTCTATCCTAAAACACAAGAGAATACTTGACTTAGCTCCACCTTTCAGCTTGGGAATACTATCGAAAGACGTACGTACTCCATCATTTGAGCCGAGTCAAAGAACTTCAGACAATCCACCTCCCCCACTGCATGTTTTATCTAGGATTAACTTCGGAATATTACCAAAAGGTGTTCATATTCCTCAGTCTACGCCAAGTCAAAGAACTTCAGAGTCTCCACTTCTCCCACCGCATGTCCCATCTAGGATTACCTTTGGAATTTTACCAAAAGGTGTTCGTATTCCTTCGTCTGGACCGAGTCAAAGAACTTCAGACAATCCACCTCCCCCACTGCATGTTCCATCTAGGATTAACTTCAGAATATTACCAAACGGTGTTCATATTCCTCCGTCTGGGCCAAGTCAAAGAACTTCAAACTCTCCACTTCTCCCACCGCATGTCTCATCTAGGATTACCTTTGGAATATTACCAAAAGGTGTTCGTATTCCTCCATCTGGACCGAGTCAAAGAACTTCAGACTATCCACCTCCCCCACAACATCTCACCTCCTTCATTCTACATAAAGAATCGAGCATCAACTTTGGGATATTACCAAAAGGTATGCGTATTCCTCCATCTGGGCCGAGTACAAGAACCTCAGATTATCCACCTCCTCCACCGCATGCTCCTATTATATGAAAAAAAAATCTAAATTTAATTTTGCGATGTATCCTGAAGCACCTATTATTCACTCTCTACTTCAACTAGAAAGATCCCATCATGAGGACCTCATCAACCCCAATTTTCATCGCAATCTCGGTCTTGTTATTGCTTTTAAAACAAGTGTTGTGACTATATTTTAAGTCAACCTAGTCCAATTTCG

Coding sequence (CDS)

ATGGTGTCAATTAGTTCTAATGTGTTTTTTGGAGCATCTGCTCTCATACTCCTCGGGTTGTACTTTGGAATCCATCAAACAAATGCTAAAAATGATTTCGTAGTTGATAAAGACATGTCTGTTCTGGAAAATGAATTGAGAGATCACATCATAAAGCATCCAAAAAGTCATATCCATTTCTCTATCCTAAAACACAAGAGAATACTTGACTTAGCTCCACCTTTCAGCTTGGGAATACTATCGAAAGACGTACGTACTCCATCATTTGAGCCGAGTCAAAGAACTTCAGACAATCCACCTCCCCCACTGCATGTTTTATCTAGGATTAACTTCGGAATATTACCAAAAGGTGTTCATATTCCTCAGTCTACGCCAAGTCAAAGAACTTCAGAGTCTCCACTTCTCCCACCGCATGTCCCATCTAGGATTACCTTTGGAATTTTACCAAAAGGTGTTCGTATTCCTTCGTCTGGACCGAGTCAAAGAACTTCAGACAATCCACCTCCCCCACTGCATGTTCCATCTAGGATTAACTTCAGAATATTACCAAACGGTGTTCATATTCCTCCGTCTGGGCCAAGTCAAAGAACTTCAAACTCTCCACTTCTCCCACCGCATGTCTCATCTAGGATTACCTTTGGAATATTACCAAAAGGTGTTCGTATTCCTCCATCTGGACCGAGTCAAAGAACTTCAGACTATCCACCTCCCCCACAACATCTCACCTCCTTCATTCTACATAAAGAATCGAGCATCAACTTTGGGATATTACCAAAAGGTATGCGTATTCCTCCATCTGGGCCGAGTACAAGAACCTCAGATTATCCACCTCCTCCACCGCATGCTCCTATTATATGA

Protein sequence

MVSISSNVFFGASALILLGLYFGIHQTNAKNDFVVDKDMSVLENELRDHIIKHPKSHIHFSILKHKRILDLAPPFSLGILSKDVRTPSFEPSQRTSDNPPPPLHVLSRINFGILPKGVHIPQSTPSQRTSESPLLPPHVPSRITFGILPKGVRIPSSGPSQRTSDNPPPPLHVPSRINFRILPNGVHIPPSGPSQRTSNSPLLPPHVSSRITFGILPKGVRIPPSGPSQRTSDYPPPPQHLTSFILHKESSINFGILPKGMRIPPSGPSTRTSDYPPPPPHAPII

Homology

[Close]

BLAST of Clc03G03190 vs. NCBI nr
Match: KAG6603169.1 (hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 275.4 bits (703), Expect = 5.5e-70
Identity = 160/290 (55.17%), Postives = 189/290 (65.17%), Query Frame = 0


Query: 24  IHQTNAKNDFVVDKDMSVLENELRDHIIKHPKS-HIHFSILKHKRILDLA--PPFSLGIL 83
           +++T+AK    VD   ++ E EL D ++KHPK   I  S    + +  L   PP  L +L
Sbjct: 25  VYETDAKKVVEVDVYDTIREEELTDQMVKHPKGISISSSRSSQRTLFHLTPPPPVVLRML 84

Query: 84  SKDVRTPSFEPSQRTSDNPPPP-------LHVLSRINFGILPKGVHIPQSTPSQRTSESP 143
            K V      PSQRTSD PPPP       L   S+INFG+LPKGV IP S PSQRTS+ P
Sbjct: 85  PKGVPISPSGPSQRTSDYPPPPPRASSVILSKQSKINFGMLPKGVPIPPSGPSQRTSDYP 144

Query: 144 LLPPHV-------PSRITFGILPKGVRIPSSGPSQRTSDNPPPP--------LHVPSRIN 203
             PP          S+I FG+LPKGV IP SGPSQRTS+ PPPP        L+  S+IN
Sbjct: 145 PPPPRASSVILNKQSKINFGMLPKGVPIPPSGPSQRTSNYPPPPPLHASSVILNTQSKIN 204

Query: 204 FRILPNGVHIPPSGPSQRTSNSPLLPPHVS-------SRITFGILPKGVRIPPSGPSQRT 263
           F +LP GV IPPSGPSQRTS+ P  PPH S       S+I FG+LPKGV IPPSGPSQRT
Sbjct: 205 FGMLPKGVPIPPSGPSQRTSDYPPPPPHASSFILNTQSKINFGMLPKGVPIPPSGPSQRT 264

Query: 264 SDYPPPPQHLTSFILHKESSINFGILPKGMRIPPSGPSTRTSDYPPPPPH 282
           SDYPPPP H +S IL+ +S INFG+LPKG+ IPPSGPS RTS+YPPPPPH
Sbjct: 265 SDYPPPPPHASSVILNTQSKINFGMLPKGVPIPPSGPSQRTSNYPPPPPH 314

[Close]

BLAST of Clc03G03190 vs. NCBI nr
Match: XP_031744003.1 (abl interactor homolog [Cucumis sativus])

HSP 1 Score: 270.8 bits (691), Expect = 1.4e-68
Identity = 164/289 (56.75%), Postives = 188/289 (65.05%), Query Frame = 0


Query: 10  FGASALILLGLYFGIHQTNAKNDFVVDKDMSVLENELRDHIIKHPKSHIHFSILKHKRIL 69
           F    L+LLGL   ++QTN  N F V++D SV ENE + H+I HPK HI FS  K KRI 
Sbjct: 3   FRTCVLVLLGL---LYQTNGINLFEVNEDNSVFENEFKAHVIIHPKQHIRFSRTKSKRIP 62

Query: 70  DLAPPFSLGILSKDVRTPSFEPSQRTSDNPPPP---LHVLSRINFGILPKGVHIPQSTPS 129
           D       GILSKD+R P F PSQR+SD+ PPP   LH  SR+NFGIL KGV    S  S
Sbjct: 63  DFDTHSGFGILSKDIRIPPFGPSQRSSDSTPPPSIVLHKESRMNFGILLKGVRTHSSGSS 122

Query: 130 QRTSESPLLPP-----HVPSRITFGILPKGVRIPSSGPSQRTSDNPPPP-----LHVPSR 189
           QR S+SP  PP     H   RI FGILPKGV   SSGPS+R SD+PPPP     LH  SR
Sbjct: 123 QRFSDSPPSPPPSIVLHKEPRIKFGILPKGVPTHSSGPSRRFSDSPPPPPPSIVLHKESR 182

Query: 190 INFRILPNGVHIPPSGPSQRTSNSPLLPP-----HVSSRITFGILPKGVRIPPSGPSQRT 249
           +NF ILP GV    SGPS+R S+SP LPP     H  S I+FGIL KGV I  SGPS+R 
Sbjct: 183 MNFGILPKGVSTHSSGPSRRFSDSPPLPPPSIVLHKKSGISFGILSKGVHILSSGPSERF 242

Query: 250 SDYPPPPQHLTSFILHKESSINFGILPKGMRIPPSGPSTRTSDYPPPPP 281
           SD PPPP    S +LHK+S I+FGILPKG+RIPPSGPS R +D PP  P
Sbjct: 243 SDSPPPPP--PSIVLHKKSGISFGILPKGVRIPPSGPSPRFADSPPSNP 286

[Close]

BLAST of Clc03G03190 vs. NCBI nr
Match: XP_031744042.1 (proline-rich receptor-like protein kinase PERK9 [Cucumis sativus])

HSP 1 Score: 258.5 bits (659), Expect = 7.0e-65
Identity = 160/294 (54.42%), Postives = 187/294 (63.61%), Query Frame = 0


Query: 10  FGASALILLGLYFGIHQTNAKNDFVVDKDMSVLENELRDHIIKHPKSHIHFSILKHKRIL 69
           F    L+LLGL   ++QTN  N F V+++ SVLENE + H+I HPK HI FS  K KRI 
Sbjct: 3   FRTCVLVLLGL---LYQTNGINLFEVNEENSVLENEFKAHVIIHPKQHIRFSRTKSKRIP 62

Query: 70  DLAPPFSLGILSKDVRTPSFEPSQRTSDNPPPP---LHVLSRINFGILPKGVHIPQSTPS 129
           D       GILSK +R P   PSQR+SD+ PPP   LH  S +NFGILPKGV    S PS
Sbjct: 63  DFDTHSGFGILSKAIRIPPSGPSQRSSDSTPPPSIVLHKESMMNFGILPKGVPTHSSGPS 122

Query: 130 QRTSESPLLPP-----HVPSRITFGILPKGVRIPSSGPSQRTSDNPPPP-----LHVPSR 189
           QR S+SP  PP     H  SRI FGILPKGV   SSGPS+R SD+PPPP     LH  SR
Sbjct: 123 QRFSDSPPSPPPSIVLHKESRIKFGILPKGVPTHSSGPSRRFSDSPPPPPPSIVLHKESR 182

Query: 190 INFRILPNGVHIPPSGPSQRTSNSPLLPP-----HVSSRITFGILPKGVRIPPSGPSQRT 249
           INF IL  GV    SGPS+R S+SP  PP     H  SR+ FGILPKGV    SGPS+R 
Sbjct: 183 INFGILSKGVRTHSSGPSRRFSDSPPPPPPSIVLHKESRMNFGILPKGVPTHSSGPSRRF 242

Query: 250 SDYPPPPQHLTSFILHKESSINFGILPKGMRIPPSGPSTRTSDYPPPPPHAPII 286
           SD PP P    S +LHK+S I+FGIL +G+ I  SGPS R SD PPPPP + ++
Sbjct: 243 SDSPPLPP--PSIVLHKKSGISFGILSEGVHILSSGPSERFSDSPPPPPPSIVL 291

[Close]

BLAST of Clc03G03190 vs. NCBI nr
Match: XP_022967687.1 (actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima])

HSP 1 Score: 249.6 bits (636), Expect = 3.2e-62
Identity = 152/289 (52.60%), Postives = 179/289 (61.94%), Query Frame = 0


Query: 24  IHQTNAKNDFVVDKDMSVLENELRDHIIKHPKSHIHFSILKHKRIL---DLAPPFSLGIL 83
           I++T+AKN   VD D ++ E EL D I+++PK     S    +R L     +P    G+L
Sbjct: 185 IYETDAKNVVEVDVDDNIREAELTDLIVQNPKGISISSSRSSQRTLFHRTPSPSLVFGML 244

Query: 84  SKDVRTPSFEPSQRTSDNPPPP-------LHVLSRINFGILPKGVHIPQSTPSQRTSESP 143
            K V  P   PSQRTSD PPPP       L+  S+IN G+LP+GV IP S PSQRTS+ P
Sbjct: 245 PKGVPIPPSRPSQRTSDYPPPPPRASSIILNKHSKINLGMLPRGVPIPPSGPSQRTSDYP 304

Query: 144 LLPPHV-------PSRITFGILPKGVRIPSSGPSQRTSDNPPPP-------LHVPSRINF 203
             PPH         S+I FG+LPKGV IP SGPSQRTS  PPPP       L+  S+I  
Sbjct: 305 PPPPHASSVILNKQSKINFGMLPKGVPIPPSGPSQRTSXYPPPPPRASSVILNKQSKIYL 364

Query: 204 RILPNGVHIPPSGPSQRTSNSPLLPPHVS-------SRITFGILPKGVRIPPSGPSQRTS 263
            +LP GV IPP G SQRTS+ P  PPH S       S+I FG+LPKGV IPPSGPS RTS
Sbjct: 365 GMLPRGVPIPPPGLSQRTSDYPHPPPHASSVILNKQSKINFGMLPKGVPIPPSGPSHRTS 424

Query: 264 DYPPPPQHLTSFILHKESSINFGILPKGMRIPPSGPSTRTSDYPPPPPH 282
           DYPPPP H+          INFG+LPK + IPPSGPS RTSDYPPPPPH
Sbjct: 425 DYPPPPPHVL------WPKINFGMLPKDVPIPPSGPSQRTSDYPPPPPH 467

[Close]

BLAST of Clc03G03190 vs. NCBI nr
Match: XP_038882352.1 (uncharacterized protein LOC120073615 [Benincasa hispida])

HSP 1 Score: 206.8 bits (525), Expect = 2.4e-49
Identity = 133/286 (46.50%), Postives = 148/286 (51.75%), Query Frame = 0


Query: 1   MVSIS-SNVFFGASALILLGLYFGIHQTNAKNDFVVDKDMSVLENELRDHIIKHPKSHIH 60
           MVSIS SNVFFGA A I LGL+  I+QT+AKN FVV+K  S +ENEL D  IKHPK HIH
Sbjct: 1   MVSISYSNVFFGACAFIFLGLHSTIYQTDAKNVFVVEKGDSTIENELSDENIKHPKRHIH 60

Query: 61  FSILKHKRILDLAPPFSLGILSKDVRTPSFEPSQRTSDNPPPPLHVLSRINFGILPKGVH 120
           FS+ K+KRI DLAPPF+LGILSK+ R P    SQ TSDNPPPP HV+S I          
Sbjct: 61  FSLGKYKRIPDLAPPFNLGILSKEERVPPSGLSQSTSDNPPPPPHVISII---------- 120

Query: 121 IPQSTPSQRTSESPLLPPHVPSRITFGILPKGVRIPSSGPSQRTSDNPPPPLHVPSRINF 180
                                                              LH  SRINF
Sbjct: 121 ---------------------------------------------------LHKESRINF 180

Query: 181 RILPNGVHIPPSGPSQRTSNSPLLPPHVSSRITFGILPKGVRIPPSGPSQRTSDYPPPPQ 240
           R                                  +L KG RIPPSGPSQRTS+ PPPP 
Sbjct: 181 R----------------------------------VLSKGNRIPPSGPSQRTSESPPPPP 191

Query: 241 HLTSFILHKESSINFGILPKGMRIPPSGPSTRTSDYPPPPPHAPII 286
           H  S ILHK+  INFGILPK M IPPSGPS R S+YP PP HAP +
Sbjct: 241 HALSVILHKKPGINFGILPKSMHIPPSGPSKRFSNYPSPPTHAPSV 191

[Close]

BLAST of Clc03G03190 vs. ExPASy Swiss-Prot
Match: Q9SX31 (Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana OX=3702 GN=PERK9 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.1e-04
Identity = 65/211 (30.81%), Postives = 73/211 (34.60%), Query Frame = 0


Query: 87  PSFEPSQRTSDNPPPPLHVLSRINFGILPKGVHIPQSTPSQRTSESPLLPPHVPSRITFG 146
           PS  P  R    PPP       +  G  P  +      P    S SP   P +PS     
Sbjct: 41  PSAPPPNRAPPPPPPVTTSPPPVANGAPPPPL------PKPPESSSPPPQPVIPSPPPST 100

Query: 147 ILPKGVRIPSSGPSQR--------TSDNPPPPLHVPSRINFRILPNGVHIPPSGPSQRTS 206
             P    IPS  PS             +PPPP  VP        P  V  PP  PS R  
Sbjct: 101 SPPPQPVIPSPPPSASPPPALVPPLPSSPPPPASVPPPRPSPSPPILVRSPP--PSVRPI 160

Query: 207 NSPLLPPHVSSRITFGILP---------KGVRIPPSGPSQRTSDYPPPPQHLTSFILHKE 266
            SP  PP  S R T    P         +  + PPS PS+R +  PPPP           
Sbjct: 161 QSP--PPPPSDRPTQSPPPPSPPSPPSERPTQSPPSPPSERPTQSPPPPS---------- 217

Query: 267 SSINFGILPKGMRIPPSGPSTRTSDYPPPPP 281
                         PPS PS R S  PPPPP
Sbjct: 221 --------------PPSPPSDRPSQSPPPPP 217

[Close]

BLAST of Clc03G03190 vs. ExPASy Swiss-Prot
Match: Q9SN46 (Leucine-rich repeat extensin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=LRX5 PE=2 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 5.5e-04
Identity = 64/207 (30.92%), Postives = 79/207 (38.16%), Query Frame = 0


Query: 91  PSQRTSDNP--PPPLHVLSRINFGILPKGVHIPQ---STPSQRTSESPLL----PPHVPS 150
           PS  T+  P   PP    +    G  P     P    S PS   S SP +    PP  P+
Sbjct: 482 PSSPTTPTPGGSPPSSPTTPTPGGSPPSSPTTPSPGGSPPSPSISPSPPITVPSPPSTPT 541

Query: 151 RITFGILPKGVRIPSSGPSQRTSDNPPPPLHVPSRINFRILPNGVHIPPSGPSQRTSNSP 210
                  P      S  PS  T   PP P+  P + +  I+P+    P +GPS  +S SP
Sbjct: 542 SPGSPPSPSSPTPSSPIPSPPTPSTPPTPIS-PGQNSPPIIPSP---PFTGPSPPSSPSP 601

Query: 211 LLPPHVSSRITFGILPKGVRIPPSGPSQRTSDYP-----PPPQHLTSFILHKESSINFGI 270
            LPP + S    G  P     PPS P+   S  P     PPP   T +            
Sbjct: 602 PLPPVIPSPPIVGPTPSSP--PPSTPTPVYSPPPPSTGYPPPPPFTGYSPPSPPPPPPPT 661

Query: 271 LPKGMRIPPSGPSTRTSDYPPPPPHAP 284
                 IPP  P T  S +PPPPP  P
Sbjct: 662 FSPSPSIPPPPPQT-YSPFPPPPPPPP 681

[Close]

BLAST of Clc03G03190 vs. ExPASy TrEMBL
Match: A0A6J1HRH7 (actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3661 GN=LOC111467141 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 1.6e-62
Identity = 152/289 (52.60%), Postives = 179/289 (61.94%), Query Frame = 0


Query: 24  IHQTNAKNDFVVDKDMSVLENELRDHIIKHPKSHIHFSILKHKRIL---DLAPPFSLGIL 83
           I++T+AKN   VD D ++ E EL D I+++PK     S    +R L     +P    G+L
Sbjct: 185 IYETDAKNVVEVDVDDNIREAELTDLIVQNPKGISISSSRSSQRTLFHRTPSPSLVFGML 244

Query: 84  SKDVRTPSFEPSQRTSDNPPPP-------LHVLSRINFGILPKGVHIPQSTPSQRTSESP 143
            K V  P   PSQRTSD PPPP       L+  S+IN G+LP+GV IP S PSQRTS+ P
Sbjct: 245 PKGVPIPPSRPSQRTSDYPPPPPRASSIILNKHSKINLGMLPRGVPIPPSGPSQRTSDYP 304

Query: 144 LLPPHV-------PSRITFGILPKGVRIPSSGPSQRTSDNPPPP-------LHVPSRINF 203
             PPH         S+I FG+LPKGV IP SGPSQRTS  PPPP       L+  S+I  
Sbjct: 305 PPPPHASSVILNKQSKINFGMLPKGVPIPPSGPSQRTSXYPPPPPRASSVILNKQSKIYL 364

Query: 204 RILPNGVHIPPSGPSQRTSNSPLLPPHVS-------SRITFGILPKGVRIPPSGPSQRTS 263
            +LP GV IPP G SQRTS+ P  PPH S       S+I FG+LPKGV IPPSGPS RTS
Sbjct: 365 GMLPRGVPIPPPGLSQRTSDYPHPPPHASSVILNKQSKINFGMLPKGVPIPPSGPSHRTS 424

Query: 264 DYPPPPQHLTSFILHKESSINFGILPKGMRIPPSGPSTRTSDYPPPPPH 282
           DYPPPP H+          INFG+LPK + IPPSGPS RTSDYPPPPPH
Sbjct: 425 DYPPPPPHVL------WPKINFGMLPKDVPIPPSGPSQRTSDYPPPPPH 467

[Close]

BLAST of Clc03G03190 vs. ExPASy TrEMBL
Match: A0A5D3CGG1 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00020 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.3e-45
Identity = 116/192 (60.42%), Postives = 130/192 (67.71%), Query Frame = 0


Query: 1   MVSISSNVFFGASALILLGLYFGIHQTNAKNDFVVDKDMSVLENELRDHIIKHPKSHIHF 60
           MVS+ +N+FF A ALI LGL+F I+ TNAK  FVVD+D S LEN LR  II HPK   HF
Sbjct: 1   MVSVGTNIFFRACALIFLGLHFEIYLTNAKRSFVVDEDNSSLENVLRGDIINHPKKVAHF 60

Query: 61  SILKHKRILDLAPPFSLGILSKDVRTPSFEPSQRTSDNPPPP------LHVLSRINFGIL 120
           S  K K+I DLAPPFSLGILSK +RTP    SQ TS+NPP P      LH  S +NFGIL
Sbjct: 61  SWPKPKKIPDLAPPFSLGILSKGIRTPPSGLSQGTSNNPPSPHVAPIILHKESMVNFGIL 120

Query: 121 PKGVHIPQSTPSQRTSESPLLPP------HVPSRITFGILPKGVRIPSSGPSQRTSDNPP 178
           PKGV IP S PS+RTS+ P  PP         SRI +GILPKGVRIP SGPS+R SD  P
Sbjct: 121 PKGVRIPPSGPSRRTSDPP--PPLSNFHSIKESRIKYGILPKGVRIPPSGPSKRNSDYYP 180

[Close]

BLAST of Clc03G03190 vs. ExPASy TrEMBL
Match: A0A5D3BP86 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold109G00050 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 3.9e-45
Identity = 107/183 (58.47%), Postives = 127/183 (69.40%), Query Frame = 0


Query: 1   MVSISSNVFFGASALILLGLYFGIHQTNAKNDFVVDKDMSVLENELRDHIIKHPKSHIHF 60
           M+SISSN+ F   A++LLGL+FGI+QTN +N F V +D SV ENEL+ + I HPK +IHF
Sbjct: 1   MMSISSNMTFKTCAIVLLGLHFGIYQTNGRNLFEVKEDNSVFENELKANSIIHPKQYIHF 60

Query: 61  SILKHKRILDLAPPFSLGILSKDVRTPSFEPSQRTSDNPPPPLHVL---SRINFGILPKG 120
           S+ K K   +    F  GI SKDVR P   PSQR+SD+PP P  +L   SRINFGILPKG
Sbjct: 61  SLTKSKGKPEFDTHFRFGIFSKDVRIPPSGPSQRSSDSPPSPSMILPKESRINFGILPKG 120

Query: 121 VHIPQSTPSQRTSESPLLPP---HVPSRITFGILPKGVRIPSSGPSQRTSDNPPPPLHVP 178
             IP S PSQR S+SPL P    H  S + FG+LPKG  IP SGPS+RTSDNPPPP H P
Sbjct: 121 SRIPPSGPSQRFSDSPLPPSTFLHKGSNMIFGMLPKGHHIPPSGPSKRTSDNPPPPPHSP 180

[Close]

BLAST of Clc03G03190 vs. ExPASy TrEMBL
Match: A0A5A7T8R0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001740 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 7.8e-38
Identity = 118/273 (43.22%), Postives = 144/273 (52.75%), Query Frame = 0


Query: 1   MVSISSNVFFGASALILLGLYFGIHQTNAKNDFVVDKDMSVLENELRDHIIKHPKSHIHF 60
           M+S SSNV FG  ALILLGL+F  +  +A++  V  +   V+EN+L DH+I+HPK HI F
Sbjct: 8   MMSTSSNVLFGTCALILLGLHFETYHIDARSFSVFGEGNYVIENQLTDHVIEHPKRHIRF 67

Query: 61  SILKHKRILDLAPPFSLGILSKDVRTPSFEPSQRTSDNPPPPLHVLSRINFG-ILPKGVH 120
           S  K KR+ DLAPPFSLGIL+KD+ TP  E      DN     H  S I F  + PK   
Sbjct: 68  SWPKPKRVPDLAPPFSLGILTKDILTPPSE--NELGDNIVK--HPKSHIRFSWVWPKPKR 127

Query: 121 IPQSTPSQRTSESPLLPPHVPSRITFGILPKGVRIPSSGPSQRTSDNPPPPLHVPSRINF 180
           +P            L PP      + GIL   +R P S      S    P  H+  R ++
Sbjct: 128 VPD-----------LAPP-----FSLGILNNHLRNPPSENELGHSITKHPKNHI--RFSW 187

Query: 181 RILPNGVHIPPSGPSQRTSNSPLLPPHVSSRITFGILPKGVRIPPSGPSQRTSDYPPPPQ 240
              P    +P            L PP      + GIL K VR PP G SQRT D P PP 
Sbjct: 188 ---PKPKRVP-----------DLAPP-----FSLGILLKDVRTPPFGSSQRTLDNPSPPP 239

Query: 241 HLTSFILHKESSINFGILPKGMRIPPSGPSTRT 273
           H    ILHK+S I FGILPKG+R+PPSGPS RT
Sbjct: 248 HAVPIILHKKSKIKFGILPKGVRVPPSGPSVRT 239

[Close]

BLAST of Clc03G03190 vs. ExPASy TrEMBL
Match: A0A438DWZ1 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_074658 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.7e-37
Identity = 103/179 (57.54%), Postives = 117/179 (65.36%), Query Frame = 0


Query: 109 INFGILPKGVHIPQSTPSQRTSESPLLPPHVPSR---ITFGILPKGVRIPSSGPSQRTSD 168
           +NF +LPKG  IP S PS R SE+P  PPH  +R   + FG+LPKGV IP SGPSQRTSD
Sbjct: 36  MNFVMLPKGDPIPPSGPSHRGSETP-PPPHSFARGPTLRFGMLPKGVPIPPSGPSQRTSD 95

Query: 169 NPPP--PLHVPSRINFRILPNGVHIPPSGPSQRTSNSPLLPPHVSSR---ITFGILPKGV 228
            PPP  P    S   F +LP G  IPPSGPS R S +P  PPH  +R   + FG+LPKG 
Sbjct: 96  PPPPPQPFARASVFRFGMLPKGDPIPPSGPSHRGSETP-PPPHSFARGPTLRFGMLPKGD 155

Query: 229 RIPPSGPSQRTSDYPPPPQHLTSFILHKESSINFGILPKGMRIPPSGPSTRTSDYPPPP 280
            IPPSGPSQRTSD PPPPQ        + S   FG+LPKG  IPPSGPS R S+ PPPP
Sbjct: 156 PIPPSGPSQRTSDPPPPPQPFA-----RASVFRFGMLPKGDPIPPSGPSHRGSETPPPP 207

[Close]

BLAST of Clc03G03190 vs. TAIR 10
Match: AT1G68690.1 (Protein kinase superfamily protein )

HSP 1 Score: 48.9 bits (115), Expect = 7.8e-06
Identity = 65/211 (30.81%), Postives = 73/211 (34.60%), Query Frame = 0


Query: 87  PSFEPSQRTSDNPPPPLHVLSRINFGILPKGVHIPQSTPSQRTSESPLLPPHVPSRITFG 146
           PS  P  R    PPP       +  G  P  +      P    S SP   P +PS     
Sbjct: 41  PSAPPPNRAPPPPPPVTTSPPPVANGAPPPPL------PKPPESSSPPPQPVIPSPPPST 100

Query: 147 ILPKGVRIPSSGPSQR--------TSDNPPPPLHVPSRINFRILPNGVHIPPSGPSQRTS 206
             P    IPS  PS             +PPPP  VP        P  V  PP  PS R  
Sbjct: 101 SPPPQPVIPSPPPSASPPPALVPPLPSSPPPPASVPPPRPSPSPPILVRSPP--PSVRPI 160

Query: 207 NSPLLPPHVSSRITFGILP---------KGVRIPPSGPSQRTSDYPPPPQHLTSFILHKE 266
            SP  PP  S R T    P         +  + PPS PS+R +  PPPP           
Sbjct: 161 QSP--PPPPSDRPTQSPPPPSPPSPPSERPTQSPPSPPSERPTQSPPPPS---------- 217

Query: 267 SSINFGILPKGMRIPPSGPSTRTSDYPPPPP 281
                         PPS PS R S  PPPPP
Sbjct: 221 --------------PPSPPSDRPSQSPPPPP 217

[Close]

BLAST of Clc03G03190 vs. TAIR 10
Match: AT4G18670.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 46.6 bits (109), Expect = 3.9e-05
Identity = 64/207 (30.92%), Postives = 79/207 (38.16%), Query Frame = 0


Query: 91  PSQRTSDNP--PPPLHVLSRINFGILPKGVHIPQ---STPSQRTSESPLL----PPHVPS 150
           PS  T+  P   PP    +    G  P     P    S PS   S SP +    PP  P+
Sbjct: 482 PSSPTTPTPGGSPPSSPTTPTPGGSPPSSPTTPSPGGSPPSPSISPSPPITVPSPPSTPT 541

Query: 151 RITFGILPKGVRIPSSGPSQRTSDNPPPPLHVPSRINFRILPNGVHIPPSGPSQRTSNSP 210
                  P      S  PS  T   PP P+  P + +  I+P+    P +GPS  +S SP
Sbjct: 542 SPGSPPSPSSPTPSSPIPSPPTPSTPPTPIS-PGQNSPPIIPSP---PFTGPSPPSSPSP 601

Query: 211 LLPPHVSSRITFGILPKGVRIPPSGPSQRTSDYP-----PPPQHLTSFILHKESSINFGI 270
            LPP + S    G  P     PPS P+   S  P     PPP   T +            
Sbjct: 602 PLPPVIPSPPIVGPTPSSP--PPSTPTPVYSPPPPSTGYPPPPPFTGYSPPSPPPPPPPT 661

Query: 271 LPKGMRIPPSGPSTRTSDYPPPPPHAP 284
                 IPP  P T  S +PPPPP  P
Sbjct: 662 FSPSPSIPPPPPQT-YSPFPPPPPPPP 681

The following BLAST results are available for this feature:

BLAST of Clc03G03190 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6603169.1	5.5e-70	55.17	hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_031744003.1	1.4e-68	56.75	abl interactor homolog [Cucumis sativus]	[more]
XP_031744042.1	7.0e-65	54.42	proline-rich receptor-like protein kinase PERK9 [Cucumis sativus]	[more]
XP_022967687.1	3.2e-62	52.60	actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima]	[more]
XP_038882352.1	2.4e-49	46.50	uncharacterized protein LOC120073615 [Benincasa hispida]	[more]

BLAST of Clc03G03190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SX31	1.1e-04	30.81	Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SN46	5.5e-04	30.92	Leucine-rich repeat extensin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]

BLAST of Clc03G03190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HRH7	1.6e-62	52.60	actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3...	[more]
A0A5D3CGG1	1.3e-45	60.42	Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A5D3BP86	3.9e-45	58.47	Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A5A7T8R0	7.8e-38	43.22	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A438DWZ1	1.7e-37	57.54	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_074658 PE=4 SV=1	[more]

BLAST of Clc03G03190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68690.1	7.8e-06	30.81	Protein kinase superfamily protein	[more]
AT4G18670.1	3.9e-05	30.92	Leucine-rich repeat (LRR) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..238
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 270..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 257..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..176
None	No IPR available	PANTHER	PTHR33599:SF13	FORMIN-LIKE PROTEIN 20	coord: 142..252
None	No IPR available	PANTHER	PTHR33599:SF13	FORMIN-LIKE PROTEIN 20	coord: 108..201
None	No IPR available	PANTHER	PTHR33599:SF13	FORMIN-LIKE PROTEIN 20	coord: 176..278
None	No IPR available	PANTHER	PTHR33599:SF13	FORMIN-LIKE PROTEIN 20	coord: 59..143
IPR039639	Protein IDA-like	PANTHER	PTHR33599	PROTEIN IDA-LIKE 5	coord: 176..278
IPR039639	Protein IDA-like	PANTHER	PTHR33599	PROTEIN IDA-LIKE 5	coord: 142..252
IPR039639	Protein IDA-like	PANTHER	PTHR33599	PROTEIN IDA-LIKE 5	coord: 59..143 coord: 108..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc03G03190.1	Clc03G03190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010227	floral organ abscission
cellular_component	GO:0110165	cellular anatomical entity