Clc03G02780 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc03G02780
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Nodulin-like / Major Facilitator Superfamily protein
Location	ClcChr03: 2731392 .. 2732258 (+)
RNA-Seq Expression	Clc03G02780
Synteny	Clc03G02780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTGCTTTTAATCCCTCTCTTCATCGCCATCAGAGAAGAAATTGTTCAATGGAATCTTAACAAAATCACCAAACTAAAGAAATCTCAAACACTCCCTCCTCAAATTTCAATTTCTGCTCCAACGTTAAATCCATCATCCCAAACCAATTCTTTTTTCCAAAACATTTTCAACAAACCCGAAAGAGGAGAAGACTACACAATTCTTCAAGCAATTTTGAGTATTGATATGCTTATTTTATACCTAACAATGATAATTGGGATTGGTTCAAGCTTTACAGCCATGGACAATCTTGGCCAAATCGGTGAATCTCAAGGCTACTCAACTGAATCCATCGATTCCATCATCTCAATCGTTAGCATTTTCAACTTCTCCGGTAGAATCTTTTCTGGGTTTGCTTCAGAAATCTTGCTAGAGAAACTCAAATTCCCTAGACCATTGATGCTCACTTTCACTCTTTTGATCTCTTGTATTGGACATATCTTAGTAGCTTTTCCCTTCCATCAATCTCTTTACATTGCATCAATCATAATGGGGTTTTGTTTGGGTTCTCAAATTCCATTGTATTTCGCTATGATTTCAGAGATTTTTGGTCTCAAACATTACTCCATGTTGTACAATTTCGGCCAACTCTCTTGCCCTGTTGGGACTTGTGTTCTCAATGTATTGGTGGCCGGGAAATTCTACGACGAGGAAGCGAAGTCGAGTGTTAATTCAACCCAATTTAAATGCGAAGGGGAACTATGTTATAGAAATTCTTTTGCGATTTTGACTGGGATGTCGTTGTTAGGAGCTGCAATTTCATTGATTTTGGTTAGAAGAATGAGCGAGTTTTTACAGAGGAGATATACACAAGAAGTTTAG

mRNA sequence

ATGGGTTTGCTTTTAATCCCTCTCTTCATCGCCATCAGAGAAGAAATTGTTCAATGGAATCTTAACAAAATCACCAAACTAAAGAAATCTCAAACACTCCCTCCTCAAATTTCAATTTCTGCTCCAACGTTAAATCCATCATCCCAAACCAATTCTTTTTTCCAAAACATTTTCAACAAACCCGAAAGAGGAGAAGACTACACAATTCTTCAAGCAATTTTGAGTATTGATATGCTTATTTTATACCTAACAATGATAATTGGGATTGGTTCAAGCTTTACAGCCATGGACAATCTTGGCCAAATCGGTGAATCTCAAGGCTACTCAACTGAATCCATCGATTCCATCATCTCAATCGTTAGCATTTTCAACTTCTCCGGTAGAATCTTTTCTGGGTTTGCTTCAGAAATCTTGCTAGAGAAACTCAAATTCCCTAGACCATTGATGCTCACTTTCACTCTTTTGATCTCTTGTATTGGACATATCTTAGTAGCTTTTCCCTTCCATCAATCTCTTTACATTGCATCAATCATAATGGGGTTTTGTTTGGGTTCTCAAATTCCATTGTATTTCGCTATGATTTCAGAGATTTTTGGTCTCAAACATTACTCCATGTTGTACAATTTCGGCCAACTCTCTTGCCCTGTTGGGACTTGTGTTCTCAATGTATTGGTGGCCGGGAAATTCTACGACGAGGAAGCGAAGTCGAGTGTTAATTCAACCCAATTTAAATGCGAAGGGGAACTATGTTATAGAAATTCTTTTGCGATTTTGACTGGGATGTCGTTGTTAGGAGCTGCAATTTCATTGATTTTGGTTAGAAGAATGAGCGAGTTTTTACAGAGGAGATATACACAAGAAGTTTAG

Coding sequence (CDS)

ATGGGTTTGCTTTTAATCCCTCTCTTCATCGCCATCAGAGAAGAAATTGTTCAATGGAATCTTAACAAAATCACCAAACTAAAGAAATCTCAAACACTCCCTCCTCAAATTTCAATTTCTGCTCCAACGTTAAATCCATCATCCCAAACCAATTCTTTTTTCCAAAACATTTTCAACAAACCCGAAAGAGGAGAAGACTACACAATTCTTCAAGCAATTTTGAGTATTGATATGCTTATTTTATACCTAACAATGATAATTGGGATTGGTTCAAGCTTTACAGCCATGGACAATCTTGGCCAAATCGGTGAATCTCAAGGCTACTCAACTGAATCCATCGATTCCATCATCTCAATCGTTAGCATTTTCAACTTCTCCGGTAGAATCTTTTCTGGGTTTGCTTCAGAAATCTTGCTAGAGAAACTCAAATTCCCTAGACCATTGATGCTCACTTTCACTCTTTTGATCTCTTGTATTGGACATATCTTAGTAGCTTTTCCCTTCCATCAATCTCTTTACATTGCATCAATCATAATGGGGTTTTGTTTGGGTTCTCAAATTCCATTGTATTTCGCTATGATTTCAGAGATTTTTGGTCTCAAACATTACTCCATGTTGTACAATTTCGGCCAACTCTCTTGCCCTGTTGGGACTTGTGTTCTCAATGTATTGGTGGCCGGGAAATTCTACGACGAGGAAGCGAAGTCGAGTGTTAATTCAACCCAATTTAAATGCGAAGGGGAACTATGTTATAGAAATTCTTTTGCGATTTTGACTGGGATGTCGTTGTTAGGAGCTGCAATTTCATTGATTTTGGTTAGAAGAATGAGCGAGTTTTTACAGAGGAGATATACACAAGAAGTTTAG

Protein sequence

MGLLLIPLFIAIREEIVQWNLNKITKLKKSQTLPPQISISAPTLNPSSQTNSFFQNIFNKPERGEDYTILQAILSIDMLILYLTMIIGIGSSFTAMDNLGQIGESQGYSTESIDSIISIVSIFNFSGRIFSGFASEILLEKLKFPRPLMLTFTLLISCIGHILVAFPFHQSLYIASIIMGFCLGSQIPLYFAMISEIFGLKHYSMLYNFGQLSCPVGTCVLNVLVAGKFYDEEAKSSVNSTQFKCEGELCYRNSFAILTGMSLLGAAISLILVRRMSEFLQRRYTQEV

Homology

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BLAST of Clc03G02780 vs. NCBI nr
Match: XP_038895749.1 (uncharacterized protein LOC120083913 [Benincasa hispida])

HSP 1 Score: 468.0 bits (1203), Expect = 5.9e-128
Identity = 247/280 (88.21%), Postives = 261/280 (93.21%), Query Frame = 0


Query: 1   MGLLLIPLFIAIREEIVQWNLNKITKLKKSQTLPPQISISAPTL-NPSSQTNSFFQNIFN 60
           MGLLL+PL IAIREE+VQWNLNKITKL+KS TL PQISISAP L NPS QT+SFFQNIFN
Sbjct: 264 MGLLLLPLLIAIREELVQWNLNKITKLRKSLTL-PQISISAPKLNNPSFQTDSFFQNIFN 323

Query: 61  KPERGEDYTILQAILSIDMLILYLTMIIGIGSSFTAMDNLGQIGESQGYSTESIDSIISI 120
           KP+RGEDYT+LQAILSIDMLILY+TMIIGIGSSFTAMDN GQIGESQGYS ES+DSIISI
Sbjct: 324 KPKRGEDYTVLQAILSIDMLILYMTMIIGIGSSFTAMDNFGQIGESQGYSNESLDSIISI 383

Query: 121 VSIFNFSGRIFSGFASEILLEKLKFPRPLMLTFTLLISCIGHILVAFPFHQSLYIASIIM 180
           VSIFNF GRIFSGFASEILLEK KFPRPLMLTFTLLISCIGHILVAFPFH SLYIASII 
Sbjct: 384 VSIFNFCGRIFSGFASEILLEKFKFPRPLMLTFTLLISCIGHILVAFPFHHSLYIASIIT 443

Query: 181 GFCLGSQIPLYFAMISEIFGLKHYSMLYNFGQLSCPVGTCVLNVLVAGKFYDEEAKSSVN 240
           GF LGSQIPLY+AMISEIFGLKHYS LYNFGQLSCP+GT VLNVLVAGKFYD+EAK+S  
Sbjct: 444 GFALGSQIPLYYAMISEIFGLKHYSFLYNFGQLSCPIGTYVLNVLVAGKFYDQEAKTSAY 503

Query: 241 STQFKCEGELCYRNSFAILTGMSLLGAAISLILVRRMSEF 280
           S+QFKCEGELCYRNSF ILTG+SLLGAAISLILVRR SEF
Sbjct: 504 SSQFKCEGELCYRNSFVILTGISLLGAAISLILVRRTSEF 542

[Close]

BLAST of Clc03G02780 vs. NCBI nr
Match: KAA0051892.1 (Nodulin-like domain-containing protein [Cucumis melo var. makuwa] >TYK17143.1 Nodulin-like domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 427.9 bits (1099), Expect = 6.7e-116
Identity = 230/281 (81.85%), Postives = 246/281 (87.54%), Query Frame = 0


Query: 1   MGLLLIPLFIAIREEIVQWNLNKITKLKKSQTLP-PQISISAPTLNPSSQTNSFFQNIFN 60
           MGLLLIPLFIAIREE+VQWNL +IT+  KSQT+      IS P   P +   SFF+N+FN
Sbjct: 1   MGLLLIPLFIAIREELVQWNLTRITRFVKSQTVTIHNRFISTPLPTPKT---SFFENVFN 60

Query: 61  KPERGEDYTILQAILSIDMLILYLTMIIGIGSSFTAMDNLGQIGESQGYSTESIDSIISI 120
           KPERGEDYT LQAILSIDM ILYLTMIIGIGSSFTA+DNL QIGES GYSTESID IISI
Sbjct: 61  KPERGEDYTFLQAILSIDMFILYLTMIIGIGSSFTAIDNLAQIGESHGYSTESIDLIISI 120

Query: 121 VSIFNFSGRIFSGFASEILLEKLKFPRPLMLTFTLLISCIGHILVAFPFHQSLYIASIIM 180
           VSIFNF GRIFSGFASEILLEK KFPRPLMLTFTLLISCIGHILVAFPFH SLYIAS+I+
Sbjct: 121 VSIFNFFGRIFSGFASEILLEKFKFPRPLMLTFTLLISCIGHILVAFPFHHSLYIASVII 180

Query: 181 GFCLGSQIPLYFAMISEIFGLKHYSMLYNFGQLSCPVGTCVLNVLVAGKFYDEEAKS-SV 240
           GFCLGSQIPLYFAMISEIFGLKHYS+LYNFGQLSCPVG+ VLNVLVAG+FYDEEAK    
Sbjct: 181 GFCLGSQIPLYFAMISEIFGLKHYSLLYNFGQLSCPVGSYVLNVLVAGRFYDEEAKMVGN 240

Query: 241 NSTQFKCEGELCYRNSFAILTGMSLLGAAISLILVRRMSEF 280
           NS  F C+GELCYRNSFAILTGMSLLGA ISLILV+R +EF
Sbjct: 241 NSIGFTCKGELCYRNSFAILTGMSLLGAVISLILVKRTNEF 278

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BLAST of Clc03G02780 vs. NCBI nr
Match: XP_004147304.1 (uncharacterized protein LOC101203173 [Cucumis sativus] >KAE8652743.1 hypothetical protein Csa_013832 [Cucumis sativus])

HSP 1 Score: 421.0 bits (1081), Expect = 8.2e-114
Identity = 223/282 (79.08%), Postives = 248/282 (87.94%), Query Frame = 0


Query: 1   MGLLLIPLFIAIREEIVQWNLNKITKLKKSQTLPPQ--ISISAPTLNPSSQTNSFFQNIF 60
           MGLLL PLFIAIREE+VQWNL KIT+L KSQT+  +   SIS PT     +T SFF+NIF
Sbjct: 266 MGLLLTPLFIAIREELVQWNLTKITQLVKSQTITQKRLTSISPPT----PKTTSFFENIF 325

Query: 61  NKPERGEDYTILQAILSIDMLILYLTMIIGIGSSFTAMDNLGQIGESQGYSTESIDSIIS 120
           +KPERGEDYT LQA++SIDM ILYLTMIIGIGSSFTAMDNL QIGESQ YSTESID IIS
Sbjct: 326 DKPERGEDYTFLQAVMSIDMFILYLTMIIGIGSSFTAMDNLAQIGESQRYSTESIDLIIS 385

Query: 121 IVSIFNFSGRIFSGFASEILLEKLKFPRPLMLTFTLLISCIGHILVAFPFHQSLYIASII 180
           + SIFNF GRIFSGFASEILLEK KFPRPLMLTFTLL+SCIG+ILVAFPFH SLY+ASI+
Sbjct: 386 MASIFNFLGRIFSGFASEILLEKFKFPRPLMLTFTLLVSCIGNILVAFPFHHSLYVASIL 445

Query: 181 MGFCLGSQIPLYFAMISEIFGLKHYSMLYNFGQLSCPVGTCVLNVLVAGKFYDEEAKS-S 240
           +GFCLGSQIPLYFAMISEIFGLKHYS+LYNFGQLSCPVG+ +LNVLVAG+FYDEEAK+ +
Sbjct: 446 IGFCLGSQIPLYFAMISEIFGLKHYSLLYNFGQLSCPVGSYILNVLVAGRFYDEEAKTIN 505

Query: 241 VNSTQFKCEGELCYRNSFAILTGMSLLGAAISLILVRRMSEF 280
            NS    C+GE CYRNSFAILTGMSL+GA ISLILV+R +EF
Sbjct: 506 GNSIYLTCKGEFCYRNSFAILTGMSLVGAVISLILVKRTNEF 543

[Close]

BLAST of Clc03G02780 vs. NCBI nr
Match: XP_023521066.1 (uncharacterized protein LOC111784665 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 381.3 bits (978), Expect = 7.2e-102
Identity = 198/279 (70.97%), Postives = 233/279 (83.51%), Query Frame = 0


Query: 1   MGLLLIPLFIAIREEIVQWNLNKITKLKKSQTLPPQISISAPTLNPSSQTNSFFQNIFNK 60
           MGLL++PLFIAIREE+V WNLNK+TK +K QT    IS S+ TL  S   NS+  NIFNK
Sbjct: 263 MGLLILPLFIAIREEMVHWNLNKMTKFEKCQTSASIISYSSSTLQHS--RNSYLSNIFNK 322

Query: 61  PERGEDYTILQAILSIDMLILYLTMIIGIGSSFTAMDNLGQIGESQGYSTESIDSIISIV 120
           PERG+DYTILQ I SIDML++ LTM IGIGSS TAMDNLGQIGESQGYS +SI++I+SI+
Sbjct: 323 PERGDDYTILQGIFSIDMLLICLTMSIGIGSSLTAMDNLGQIGESQGYSAQSINAIVSII 382

Query: 121 SIFNFSGRIFSGFASEILLEKLKFPRPLMLTFTLLISCIGHILVAFPFHQSLYIASIIMG 180
           SIFNF GRIFSGF SEILLE+ KFPRPLMLT TLL+SCIG++LVAFPF+ SLYIASI++G
Sbjct: 383 SIFNFIGRIFSGFVSEILLEQYKFPRPLMLTLTLLVSCIGYLLVAFPFYNSLYIASILIG 442

Query: 181 FCLGSQIPLYFAMISEIFGLKHYSMLYNFGQLSCPVGTCVLNVLVAGKFYDEEAKSSVNS 240
           F  GSQ+ L   +ISEIFGLKHY++ YN  QLSCP+GT VLNVLVAGK YD+E K+ + S
Sbjct: 443 FAFGSQVLLDITIISEIFGLKHYAIFYNIAQLSCPIGTYVLNVLVAGKLYDKEVKTWIAS 502

Query: 241 TQFKCEGELCYRNSFAILTGMSLLGAAISLILVRRMSEF 280
           +++KC GE CYR+SF ILTGMSLLGAAISLILV+R  EF
Sbjct: 503 SEYKCHGEQCYRDSFTILTGMSLLGAAISLILVKRTREF 539

[Close]

BLAST of Clc03G02780 vs. NCBI nr
Match: XP_022964763.1 (uncharacterized protein LOC111464764 [Cucurbita moschata])

HSP 1 Score: 377.5 bits (968), Expect = 1.0e-100
Identity = 196/279 (70.25%), Postives = 233/279 (83.51%), Query Frame = 0


Query: 1   MGLLLIPLFIAIREEIVQWNLNKITKLKKSQTLPPQISISAPTLNPSSQTNSFFQNIFNK 60
           MGLL++PLFIAIREE+V+WNLNK+TK +K QT    IS S+ TL  S   NS   NIFNK
Sbjct: 263 MGLLILPLFIAIREEMVRWNLNKMTKFEKCQTSASIISYSSSTLQHS--RNSDLSNIFNK 322

Query: 61  PERGEDYTILQAILSIDMLILYLTMIIGIGSSFTAMDNLGQIGESQGYSTESIDSIISIV 120
           PERG+DYTILQ   SIDML++ LTM IGIGSS TAMDNLGQIGESQGYS ESI++I++I+
Sbjct: 323 PERGDDYTILQGFFSIDMLLICLTMSIGIGSSLTAMDNLGQIGESQGYSAESINAIVTII 382

Query: 121 SIFNFSGRIFSGFASEILLEKLKFPRPLMLTFTLLISCIGHILVAFPFHQSLYIASIIMG 180
           SIFNF GRIFSGF SEILLE+ KFPRPLMLT TLL+SCIG++LVAFPF+ SLYIASI++G
Sbjct: 383 SIFNFLGRIFSGFVSEILLEQYKFPRPLMLTLTLLVSCIGYLLVAFPFNNSLYIASILIG 442

Query: 181 FCLGSQIPLYFAMISEIFGLKHYSMLYNFGQLSCPVGTCVLNVLVAGKFYDEEAKSSVNS 240
           F  GSQ+ L   +ISEIFGLKHY++ YN  QLSCP+GT VLNVLVAGK YD+E K+ ++S
Sbjct: 443 FAFGSQVLLDITVISEIFGLKHYAIFYNIAQLSCPIGTYVLNVLVAGKLYDKEVKTWIDS 502

Query: 241 TQFKCEGELCYRNSFAILTGMSLLGAAISLILVRRMSEF 280
           +++KC GE CY++SF ILTGMSLLGAAISLILV+R  EF
Sbjct: 503 SEYKCHGEQCYKDSFTILTGMSLLGAAISLILVKRTREF 539

[Close]

BLAST of Clc03G02780 vs. ExPASy Swiss-Prot
Match: F4I9E1 (Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana OX=3702 GN=NFD4 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.1e-07
Identity = 55/229 (24.02%), Postives = 100/229 (43.67%), Query Frame = 0


Query: 59  NKPERGEDYTILQAILSIDMLILYLTMIIGIGSSFTAMDNLGQIGESQGYSTESIDSIIS 118
           N    G++++    I  ++  + Y+    G        +NLGQI +S G   ++  ++++
Sbjct: 341 NTVRLGDEHSFRLLISRLEFWLYYIAYFCGGTIGLVYSNNLGQIAQSLG---QNSTTLVT 400

Query: 119 IVSIFNFSGRIFSGFASEILLEKLKFPRPLMLTFTLLISCIGHILVAFPFHQ--SLYIAS 178
           I S F+F GR+ S  A + + ++ +  R       LL + I   L+A    Q  +L  A+
Sbjct: 401 IYSSFSFFGRLLSA-APDFMHKRFRLTRTGWFAIALLPTPIAFFLLAVSSSQQTALQTAT 460

Query: 179 IIMGFCLGSQIPLYFAMISEIFGLKHYSMLYNFGQLSCPVGTCVLNVLVAGKFYDEEAKS 238
            ++G   G       ++ S++FG     + +N    + P+G+ +L   +A   Y+  A  
Sbjct: 461 ALIGLSSGFIFAAAVSITSDLFGPNSVGVNHNILITNIPIGS-LLYGYIAASIYEANASP 520

Query: 239 SVN---STQFKCEGELCYRNSFAILTGMSLLGAAISLILVRRMSEFLQR 283
            +    S    C G  CY  +F     +S+LG   SL L  R      R
Sbjct: 521 DITPIVSDSIVCIGRDCYFKTFVFWGCLSILGVVSSLSLYIRTKPVYHR 564

[Close]

BLAST of Clc03G02780 vs. ExPASy TrEMBL
Match: A0A5D3CYZ8 (Nodulin-like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2273G00010 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 3.3e-116
Identity = 230/281 (81.85%), Postives = 246/281 (87.54%), Query Frame = 0


Query: 1   MGLLLIPLFIAIREEIVQWNLNKITKLKKSQTLP-PQISISAPTLNPSSQTNSFFQNIFN 60
           MGLLLIPLFIAIREE+VQWNL +IT+  KSQT+      IS P   P +   SFF+N+FN
Sbjct: 1   MGLLLIPLFIAIREELVQWNLTRITRFVKSQTVTIHNRFISTPLPTPKT---SFFENVFN 60

Query: 61  KPERGEDYTILQAILSIDMLILYLTMIIGIGSSFTAMDNLGQIGESQGYSTESIDSIISI 120
           KPERGEDYT LQAILSIDM ILYLTMIIGIGSSFTA+DNL QIGES GYSTESID IISI
Sbjct: 61  KPERGEDYTFLQAILSIDMFILYLTMIIGIGSSFTAIDNLAQIGESHGYSTESIDLIISI 120

Query: 121 VSIFNFSGRIFSGFASEILLEKLKFPRPLMLTFTLLISCIGHILVAFPFHQSLYIASIIM 180
           VSIFNF GRIFSGFASEILLEK KFPRPLMLTFTLLISCIGHILVAFPFH SLYIAS+I+
Sbjct: 121 VSIFNFFGRIFSGFASEILLEKFKFPRPLMLTFTLLISCIGHILVAFPFHHSLYIASVII 180

Query: 181 GFCLGSQIPLYFAMISEIFGLKHYSMLYNFGQLSCPVGTCVLNVLVAGKFYDEEAKS-SV 240
           GFCLGSQIPLYFAMISEIFGLKHYS+LYNFGQLSCPVG+ VLNVLVAG+FYDEEAK    
Sbjct: 181 GFCLGSQIPLYFAMISEIFGLKHYSLLYNFGQLSCPVGSYVLNVLVAGRFYDEEAKMVGN 240

Query: 241 NSTQFKCEGELCYRNSFAILTGMSLLGAAISLILVRRMSEF 280
           NS  F C+GELCYRNSFAILTGMSLLGA ISLILV+R +EF
Sbjct: 241 NSIGFTCKGELCYRNSFAILTGMSLLGAVISLILVKRTNEF 278

[Close]

BLAST of Clc03G02780 vs. ExPASy TrEMBL
Match: A0A0A0LUU0 (Nodulin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G096040 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 4.0e-114
Identity = 223/282 (79.08%), Postives = 248/282 (87.94%), Query Frame = 0


Query: 1   MGLLLIPLFIAIREEIVQWNLNKITKLKKSQTLPPQ--ISISAPTLNPSSQTNSFFQNIF 60
           MGLLL PLFIAIREE+VQWNL KIT+L KSQT+  +   SIS PT     +T SFF+NIF
Sbjct: 166 MGLLLTPLFIAIREELVQWNLTKITQLVKSQTITQKRLTSISPPT----PKTTSFFENIF 225

Query: 61  NKPERGEDYTILQAILSIDMLILYLTMIIGIGSSFTAMDNLGQIGESQGYSTESIDSIIS 120
           +KPERGEDYT LQA++SIDM ILYLTMIIGIGSSFTAMDNL QIGESQ YSTESID IIS
Sbjct: 226 DKPERGEDYTFLQAVMSIDMFILYLTMIIGIGSSFTAMDNLAQIGESQRYSTESIDLIIS 285

Query: 121 IVSIFNFSGRIFSGFASEILLEKLKFPRPLMLTFTLLISCIGHILVAFPFHQSLYIASII 180
           + SIFNF GRIFSGFASEILLEK KFPRPLMLTFTLL+SCIG+ILVAFPFH SLY+ASI+
Sbjct: 286 MASIFNFLGRIFSGFASEILLEKFKFPRPLMLTFTLLVSCIGNILVAFPFHHSLYVASIL 345

Query: 181 MGFCLGSQIPLYFAMISEIFGLKHYSMLYNFGQLSCPVGTCVLNVLVAGKFYDEEAKS-S 240
           +GFCLGSQIPLYFAMISEIFGLKHYS+LYNFGQLSCPVG+ +LNVLVAG+FYDEEAK+ +
Sbjct: 346 IGFCLGSQIPLYFAMISEIFGLKHYSLLYNFGQLSCPVGSYILNVLVAGRFYDEEAKTIN 405

Query: 241 VNSTQFKCEGELCYRNSFAILTGMSLLGAAISLILVRRMSEF 280
            NS    C+GE CYRNSFAILTGMSL+GA ISLILV+R +EF
Sbjct: 406 GNSIYLTCKGEFCYRNSFAILTGMSLVGAVISLILVKRTNEF 443

[Close]

BLAST of Clc03G02780 vs. ExPASy TrEMBL
Match: A0A6J1HLV5 (uncharacterized protein LOC111464764 OS=Cucurbita moschata OX=3662 GN=LOC111464764 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 5.0e-101
Identity = 196/279 (70.25%), Postives = 233/279 (83.51%), Query Frame = 0


Query: 1   MGLLLIPLFIAIREEIVQWNLNKITKLKKSQTLPPQISISAPTLNPSSQTNSFFQNIFNK 60
           MGLL++PLFIAIREE+V+WNLNK+TK +K QT    IS S+ TL  S   NS   NIFNK
Sbjct: 263 MGLLILPLFIAIREEMVRWNLNKMTKFEKCQTSASIISYSSSTLQHS--RNSDLSNIFNK 322

Query: 61  PERGEDYTILQAILSIDMLILYLTMIIGIGSSFTAMDNLGQIGESQGYSTESIDSIISIV 120
           PERG+DYTILQ   SIDML++ LTM IGIGSS TAMDNLGQIGESQGYS ESI++I++I+
Sbjct: 323 PERGDDYTILQGFFSIDMLLICLTMSIGIGSSLTAMDNLGQIGESQGYSAESINAIVTII 382

Query: 121 SIFNFSGRIFSGFASEILLEKLKFPRPLMLTFTLLISCIGHILVAFPFHQSLYIASIIMG 180
           SIFNF GRIFSGF SEILLE+ KFPRPLMLT TLL+SCIG++LVAFPF+ SLYIASI++G
Sbjct: 383 SIFNFLGRIFSGFVSEILLEQYKFPRPLMLTLTLLVSCIGYLLVAFPFNNSLYIASILIG 442

Query: 181 FCLGSQIPLYFAMISEIFGLKHYSMLYNFGQLSCPVGTCVLNVLVAGKFYDEEAKSSVNS 240
           F  GSQ+ L   +ISEIFGLKHY++ YN  QLSCP+GT VLNVLVAGK YD+E K+ ++S
Sbjct: 443 FAFGSQVLLDITVISEIFGLKHYAIFYNIAQLSCPIGTYVLNVLVAGKLYDKEVKTWIDS 502

Query: 241 TQFKCEGELCYRNSFAILTGMSLLGAAISLILVRRMSEF 280
           +++KC GE CY++SF ILTGMSLLGAAISLILV+R  EF
Sbjct: 503 SEYKCHGEQCYKDSFTILTGMSLLGAAISLILVKRTREF 539

[Close]

BLAST of Clc03G02780 vs. ExPASy TrEMBL
Match: A0A6J1I2R1 (uncharacterized protein LOC111469395 OS=Cucurbita maxima OX=3661 GN=LOC111469395 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 1.6e-99
Identity = 195/282 (69.15%), Postives = 227/282 (80.50%), Query Frame = 0


Query: 1   MGLLLIPLFIAIREEIVQWNLNKITKLKKSQTLPPQISISAPTLNPSSQTNSFFQNIFNK 60
           MGLL++PLFIAIREE+V WNLNK+TK +K QT    IS S+ TL  S   NS+  NIFNK
Sbjct: 1   MGLLILPLFIAIREEMVHWNLNKMTKFEKCQTSASIISYSSSTLQHS--RNSYLSNIFNK 60

Query: 61  PERGEDYTILQAILSIDMLILYLTMIIGIGSSFTAMDNLGQIGESQGYSTESIDSIISIV 120
           PERG+DYTILQ I SIDML++ L M IG GSS TAMDNLGQIGESQGYSTES+++++SI+
Sbjct: 61  PERGDDYTILQGIFSIDMLLICLAMSIGTGSSLTAMDNLGQIGESQGYSTESVNAMVSII 120

Query: 121 SIFNFSGRIFSGFASEILLEKLKFPRPLMLTFTLLISCIGHILVAFPFHQSLYIASIIMG 180
           SIFNF GRIFSGF SEILLEK KFPRPLMLT TLL+SCIG +LVAFPFH SLYIASI++G
Sbjct: 121 SIFNFLGRIFSGFVSEILLEKYKFPRPLMLTLTLLVSCIGFLLVAFPFHNSLYIASILIG 180

Query: 181 FCLGSQIPLYFAMISEIFGLKHYSMLYNFGQLSCPVGTCVLNVLVAGKFYDEEAKSSVNS 240
           F  GSQ+ L   MISE FGL+HY+M YN  QL+CP+GT VL VLVAGK YDEE K+  +S
Sbjct: 181 FAFGSQVLLDITMISEFFGLEHYAMFYNVAQLACPIGTYVLKVLVAGKLYDEEVKTWSDS 240

Query: 241 TQFKCEGELCYRNSFAILTGMSLLGAAISLILVRRMSEFLQR 283
            ++ C GE CYRNSF  LT MSLLGAAISLILV+R  EF ++
Sbjct: 241 PEYICHGEQCYRNSFTFLTEMSLLGAAISLILVKRTREFYRQ 280

[Close]

BLAST of Clc03G02780 vs. ExPASy TrEMBL
Match: A0A6J1I3Q6 (uncharacterized protein LOC111469393 OS=Cucurbita maxima OX=3661 GN=LOC111469393 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 5.8e-97
Identity = 192/282 (68.09%), Postives = 229/282 (81.21%), Query Frame = 0


Query: 1   MGLLLIPLFIAIREEIVQWNLNKITKLKKSQTLPPQISISAPTLNPSSQTNSFFQNIFNK 60
           +GLL++PLFIAIREE+VQ NLN +TK +KS++  PQI I A + N  +  NS++ NIFNK
Sbjct: 251 IGLLILPLFIAIREEMVQLNLNNMTKFEKSRS-KPQIPIHAISHN-QNHGNSYYSNIFNK 310

Query: 61  PERGEDYTILQAILSIDMLILYLTMIIGIGSSFTAMDNLGQIGESQGYSTESIDSIISIV 120
           PERG+DYTILQ I SIDML++ L M IG GSS TAMDNLGQIGESQGYSTES+++++SI+
Sbjct: 311 PERGDDYTILQGIFSIDMLLICLAMSIGTGSSLTAMDNLGQIGESQGYSTESVNAMVSII 370

Query: 121 SIFNFSGRIFSGFASEILLEKLKFPRPLMLTFTLLISCIGHILVAFPFHQSLYIASIIMG 180
           SIFNF GRIFSGF SEILLEK KFPRPLMLT TLL+SCIG +LVAFPFH SLYIASI++G
Sbjct: 371 SIFNFLGRIFSGFVSEILLEKYKFPRPLMLTLTLLVSCIGFLLVAFPFHNSLYIASILIG 430

Query: 181 FCLGSQIPLYFAMISEIFGLKHYSMLYNFGQLSCPVGTCVLNVLVAGKFYDEEAKSSVNS 240
           F  GSQ+ L   MISE FGL+HY+M YN  QL+CP+GT VL VLVAGK YDEE K+  +S
Sbjct: 431 FAFGSQVLLDITMISEFFGLEHYAMFYNVAQLACPIGTYVLKVLVAGKLYDEEVKTWSDS 490

Query: 241 TQFKCEGELCYRNSFAILTGMSLLGAAISLILVRRMSEFLQR 283
            ++ C GE CYRNSF  LT MSLLGAAISLILV+R  EF ++
Sbjct: 491 PEYICHGEQCYRNSFTFLTEMSLLGAAISLILVKRTREFYRQ 530

[Close]

BLAST of Clc03G02780 vs. TAIR 10
Match: AT2G28120.1 (Major facilitator superfamily protein )

HSP 1 Score: 256.9 bits (655), Expect = 1.9e-68
Identity = 139/293 (47.44%), Postives = 191/293 (65.19%), Query Frame = 0


Query: 3   LLLIPLFIAIREEIVQWNLNKI-------TKLKK-SQTLPPQISISAPTLNPSSQTNSFF 62
           LL +PL +++++E+  WN+ K+        K++K  + L      +A       +T S F
Sbjct: 253 LLFVPLTVSVKQELEVWNMMKLPIEEPSEVKVEKPKKELDLDQDKAAKVNGEEKETKSCF 312

Query: 63  QNIFNKPERGEDYTILQAILSIDMLILYLTMIIGIGSSFTAMDNLGQIGESQGYSTESID 122
             +F+ P RGEDYTILQA+LS DM+IL++    G+GSS TA+DNLGQIGES GY   ++ 
Sbjct: 313 STVFSPPPRGEDYTILQALLSTDMIILFVATFCGLGSSLTAVDNLGQIGESLGYPNHTVS 372

Query: 123 SIISIVSIFNFSGRIFSGFASEILLEKLKFPRPLMLTFTLLISCIGHILVAFPFHQSLYI 182
           S +S+VSI+N+ GR+FSGF SE LL K K PRPLM+T  LL+SC GH+L+AFP   S+YI
Sbjct: 373 SFVSLVSIWNYFGRVFSGFVSEYLLAKYKLPRPLMMTLVLLLSCAGHLLIAFPVPGSVYI 432

Query: 183 ASIIMGFCLGSQIPLYFAMISEIFGLKHYSMLYNFGQLSCPVGTCVLNVLVAGKFYDEEA 242
           ASI+MGF  G+Q+PL FA+ISE+FGLK+YS L+N GQL+ P+G+ +LNV V G  YD+EA
Sbjct: 433 ASILMGFSFGAQLPLLFAIISELFGLKYYSTLFNCGQLASPLGSYILNVRVTGMLYDKEA 492

Query: 243 KSSVNS--------TQFKCEGELCYRNSFAILTGMSLLGAAISLILVRRMSEF 280
              + +            C G  CY+  F IL  ++  GA +SL L  R  EF
Sbjct: 493 LKQLTARGLTRKDVKDLTCLGSQCYKLPFLILAAVTFFGALVSLGLAIRTREF 545

[Close]

BLAST of Clc03G02780 vs. TAIR 10
Match: AT2G39210.1 (Major facilitator superfamily protein )

HSP 1 Score: 250.4 bits (638), Expect = 1.8e-66
Identity = 139/301 (46.18%), Postives = 188/301 (62.46%), Query Frame = 0


Query: 3   LLLIPLFIAIREEIVQWNLNKITKLKKSQTLPPQISISAPTLNPSS-------------- 62
           LLL+P+ + I EE   W   K  ++  +   P  +    P L+ S               
Sbjct: 257 LLLLPIIVVILEEKKLW---KEKQVALNDPAPINVVTEKPKLDSSEFKDDDGEESKEVVE 316

Query: 63  --QTNSFFQNIFNKPERGEDYTILQAILSIDMLILYLTMIIGIGSSFTAMDNLGQIGESQ 122
             +T S +  +FN PERG+DYTILQA+ S+DMLIL+L  I G+G + TA+DNLGQIG S 
Sbjct: 317 KVKTPSCWTTVFNPPERGDDYTILQALFSVDMLILFLATICGVGGTLTAIDNLGQIGNSL 376

Query: 123 GYSTESIDSIISIVSIFNFSGRIFSGFASEILLEKLKFPRPLMLTFTLLISCIGHILVAF 182
           GY   S+ + +S+VSI+N+ GR+ SG  SEI L K KFPRPLMLT  LL+SC GH+L+AF
Sbjct: 377 GYPKRSVSTFVSLVSIWNYYGRVVSGVVSEIFLIKYKFPRPLMLTMVLLLSCAGHLLIAF 436

Query: 183 PFHQSLYIASIIMGFCLGSQIPLYFAMISEIFGLKHYSMLYNFGQLSCPVGTCVLNVLVA 242
                LY+AS+I+GFC G+Q PL FA+ISEIFGLK+YS LYNFG ++ P+G+ +LNV VA
Sbjct: 437 NVPGGLYVASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGSVASPIGSYLLNVRVA 496

Query: 243 GKFYDEEA--------KSSVNSTQFKCEGELCYRNSFAILTGMSLLGAAISLILVRRMSE 280
           G  YD EA        K+ V      C G  C++ SF I+  ++L G  +S++LV R  +
Sbjct: 497 GYLYDVEAGKQYKALGKTRVEGQDLNCIGTSCFKLSFIIIAAVTLFGVLVSMVLVIRTKK 554

[Close]

BLAST of Clc03G02780 vs. TAIR 10
Match: AT2G34355.1 (Major facilitator superfamily protein )

HSP 1 Score: 159.5 bits (402), Expect = 4.2e-39
Identity = 100/279 (35.84%), Postives = 158/279 (56.63%), Query Frame = 0


Query: 3   LLLIPLFIAIREEIVQWNLNKITKLKKSQTLPPQISISAPTLNPSSQTNSFFQNIFNKPE 62
           LL  PL +A+R              +K QTL    S+  P L+ S+  +    NIF   +
Sbjct: 252 LLASPLLVAVR-----------ALREKRQTLS---SLDGPVLDTSALLDPPSSNIFPDGD 311

Query: 63  R--GEDYTILQAILSIDMLILYLTMIIGIGSSFTAMDNLGQIGESQGYSTESIDSIISIV 122
               ED  IL+A+ +++  +L+L M+ G+GS F  ++N+ QIGES  YS+  ++S++S+ 
Sbjct: 312 HLVAEDSNILEAMSTVNFWLLFLAMLCGMGSGFATVNNMRQIGESLRYSSVQLNSLVSLW 371

Query: 123 SIFNFSGRIFSGFASEILLEKLKFPRPLMLTFTLLISCIGHILVAFPFHQSLYIASIIMG 182
           SI+NF GR  +G+ S+  L K  +PRP+ +  TL +  IGHI+VA     SLY  S+++G
Sbjct: 372 SIWNFLGRFGAGYVSDTFLHKHSWPRPIFMAITLGVMAIGHIIVASGVQGSLYAGSVLIG 431

Query: 183 FCLGSQIPLYFAMISEIFGLKHYSMLYNFGQLSCPVGTCVLNVLVAGKFYDEEAKSSVNS 242
              GSQ  L   + SEIFG++H   +Y    ++ P+G+ +L+V V G FYD+ A    NS
Sbjct: 432 MAYGSQWSLMPTITSEIFGIRHMGTIYFTISIAGPIGSYILSVKVIGYFYDKVASEDDNS 491

Query: 243 TQFKCEGELCYRNSFAILTGMSLLGAAISLILVRRMSEF 280
               C G  C+R SF I+  ++L G+ ++ +L  R  +F
Sbjct: 492 ----CFGSQCFRTSFMIMASVALFGSLVASVLFFRTHKF 512

[Close]

BLAST of Clc03G02780 vs. TAIR 10
Match: AT3G01930.1 (Major facilitator superfamily protein )

HSP 1 Score: 156.0 bits (393), Expect = 4.6e-38
Identity = 79/221 (35.75%), Postives = 135/221 (61.09%), Query Frame = 0


Query: 61  PERGEDYTILQAILSIDMLILYLTMIIGIGSSFTAMDNLGQIGESQGYSTESIDSIISIV 120
           P RGED+T+ QA++  D  +++ ++++G GS  T +DNLGQ+ +S GY    +   +S++
Sbjct: 239 PHRGEDFTLTQALVKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTHV--FVSMI 298

Query: 121 SIFNFSGRIFSGFASEILLEKLKFPRPLMLTFTLLISCIGHILVAFPFHQSLYIASIIMG 180
           SI+NF GRI  G+ SE+++    +PRP+ +    L+  +GHI  A+ +  +++I ++++G
Sbjct: 299 SIWNFLGRIGGGYFSELIVRDYAYPRPVAIAVAQLVMSVGHIFFAYGWPGAMHIGTLLIG 358

Query: 181 FCLGSQIPLYFAMISEIFGLKHYSMLYNFGQLSCPVGTCVLNVLVAGKFYDEEAKSSVNS 240
              G+   +  A  SE+FGLK +  LYNF  L+ P G+ V + L+A   YD EA+     
Sbjct: 359 LGYGAHWAIVPATASELFGLKKFGALYNFLTLANPAGSLVFSGLIASSIYDREAERQAQG 418

Query: 241 TQF------KCEGELCYRNSFAILTGMSLLGAAISLILVRR 276
           + F      +C G +CY  +  I++G  L+ AA+S+ILV+R
Sbjct: 419 SLFNPDDVLRCRGSICYFLTSLIMSGFCLIAAALSMILVQR 457

[Close]

BLAST of Clc03G02780 vs. TAIR 10
Match: AT3G01930.2 (Major facilitator superfamily protein )

HSP 1 Score: 156.0 bits (393), Expect = 4.6e-38
Identity = 79/221 (35.75%), Postives = 135/221 (61.09%), Query Frame = 0


Query: 61  PERGEDYTILQAILSIDMLILYLTMIIGIGSSFTAMDNLGQIGESQGYSTESIDSIISIV 120
           P RGED+T+ QA++  D  +++ ++++G GS  T +DNLGQ+ +S GY    +   +S++
Sbjct: 352 PHRGEDFTLTQALVKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTHV--FVSMI 411

Query: 121 SIFNFSGRIFSGFASEILLEKLKFPRPLMLTFTLLISCIGHILVAFPFHQSLYIASIIMG 180
           SI+NF GRI  G+ SE+++    +PRP+ +    L+  +GHI  A+ +  +++I ++++G
Sbjct: 412 SIWNFLGRIGGGYFSELIVRDYAYPRPVAIAVAQLVMSVGHIFFAYGWPGAMHIGTLLIG 471

Query: 181 FCLGSQIPLYFAMISEIFGLKHYSMLYNFGQLSCPVGTCVLNVLVAGKFYDEEAKSSVNS 240
              G+   +  A  SE+FGLK +  LYNF  L+ P G+ V + L+A   YD EA+     
Sbjct: 472 LGYGAHWAIVPATASELFGLKKFGALYNFLTLANPAGSLVFSGLIASSIYDREAERQAQG 531

Query: 241 TQF------KCEGELCYRNSFAILTGMSLLGAAISLILVRR 276
           + F      +C G +CY  +  I++G  L+ AA+S+ILV+R
Sbjct: 532 SLFNPDDVLRCRGSICYFLTSLIMSGFCLIAAALSMILVQR 570

The following BLAST results are available for this feature:

BLAST of Clc03G02780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895749.1	5.9e-128	88.21	uncharacterized protein LOC120083913 [Benincasa hispida]	[more]
KAA0051892.1	6.7e-116	81.85	Nodulin-like domain-containing protein [Cucumis melo var. makuwa] >TYK17143.1 No...	[more]
XP_004147304.1	8.2e-114	79.08	uncharacterized protein LOC101203173 [Cucumis sativus] >KAE8652743.1 hypothetica...	[more]
XP_023521066.1	7.2e-102	70.97	uncharacterized protein LOC111784665 [Cucurbita pepo subsp. pepo]	[more]
XP_022964763.1	1.0e-100	70.25	uncharacterized protein LOC111464764 [Cucurbita moschata]	[more]

BLAST of Clc03G02780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4I9E1	4.1e-07	24.02	Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana OX=3702 GN=NFD4 PE=3 ...	[more]

BLAST of Clc03G02780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CYZ8	3.3e-116	81.85	Nodulin-like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0LUU0	4.0e-114	79.08	Nodulin-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G09604...	[more]
A0A6J1HLV5	5.0e-101	70.25	uncharacterized protein LOC111464764 OS=Cucurbita moschata OX=3662 GN=LOC1114647...	[more]
A0A6J1I2R1	1.6e-99	69.15	uncharacterized protein LOC111469395 OS=Cucurbita maxima OX=3661 GN=LOC111469395...	[more]
A0A6J1I3Q6	5.8e-97	68.09	uncharacterized protein LOC111469393 OS=Cucurbita maxima OX=3661 GN=LOC111469393...	[more]

BLAST of Clc03G02780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28120.1	1.9e-68	47.44	Major facilitator superfamily protein	[more]
AT2G39210.1	1.8e-66	46.18	Major facilitator superfamily protein	[more]
AT2G34355.1	4.2e-39	35.84	Major facilitator superfamily protein	[more]
AT3G01930.1	4.6e-38	35.75	Major facilitator superfamily protein	[more]
AT3G01930.2	4.6e-38	35.75	Major facilitator superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 84..275 e-value: 6.1E-13 score: 48.4
IPR036259	MFS transporter superfamily	GENE3D	1.20.1250.20	MFS general substrate transporter like domains	coord: 54..280 e-value: 5.2E-14 score: 54.1
IPR036259	MFS transporter superfamily	SUPERFAMILY	103473	MFS general substrate transporter	coord: 59..276
None	No IPR available	PANTHER	PTHR21576	UNCHARACTERIZED NODULIN-LIKE PROTEIN	coord: 3..281
None	No IPR available	PANTHER	PTHR21576:SF29	PROTEIN NUCLEAR FUSION DEFECTIVE 4	coord: 3..281

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc03G02780.1	Clc03G02780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0022857	transmembrane transporter activity