Clc03G02140 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc03G02140
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Histone H2A
Location	ClcChr03: 1981008 .. 1984861 (+)
RNA-Seq Expression	Clc03G02140
Synteny	Clc03G02140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTGCACCCATTTGTGAATCCGCCTCCATCCCCAAATCCCCGTTGTTTTATGCCGCTCTATAAAATCATTCCCGCAACTTCAATCCTTCAGATCGTCATATCCACTGACTCAATTTCCATTTTCTTGTAATTCCTTTTCATTTTCCGGCGACCAAGTTAAGTTCCCATGGAGACCGGCGGCAAGTTGAAGAAGGGAGCAGGAGGAAGAAAGGGCGGCGGCCCGAAGAAGAAGCCCGTTTCTCGCTCCGTTAAGGCCGGTCTCCAGTTCCCCGTCGGTAGGATCGGTCGATACTTGAAGAATGGCCGGTATGCTCGACGTGTTGGTACTGGAGCTCCGGTCTACTTGGCCGCCGTTCTTGAGTATCTCGCCGCTGAGGTACCTGCTGAACTCCTTTTGCTCTCTTAGATCTGTGTTTCTTTCTGTTTGGTGTGGATGTGGTTTTTATATCTGATACTTAGGGATTCGAGTTTAATTCTAGAACTAGACTCCTAATTGGCTGTTGATAAGTAGCGAATTCAAAGAACTGATGAATTTGAAGTGAAAGATCTTCAAGTTCTGAGCTTCGGTTTTCTAATTTTTGCTTTTCGATGTGTGATTGCTGTAATTTGGAATTCAATTATTGTTAGGAAAATGTTGAATTCAACTTAATGCCCTTGTTCGAATGGGTGGGCTTGATTCATGAACATGATTGAAACTTAGGGTTTATGATATAGAATTTCAAGTCCTCTTCAAATTGCATGATTTCGATCTCTAATTTGTCCAAACGGGGGAAAATTAGGTGTTGGAATTGGCTGGAAATGCAGCCAGAGATAACAAGAAGAACAGAATAATTCCTAGGCATGTATTGTTGGCCATAAGGAACGATGAAGAGCTCGGGAAATTGCTTGCTGGTGTAACAATTGCACATGGTGGTGTTCTTCCAAACATAAACCCAGTTCTGTTGCCAAAGAAAAGTGAGAAGGCAACCACTAAAGAACCAAAATCTCCATCAAAGGCCCCCAAAGCAACCAAATCTCCAAAGAAGGCTTAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCATCTGAAAAACTTTTGACTTGTTCTTTGCCCATTTGTATGTACTTTGTTGGCTTTTTAGGGTCTTCTTCTGTGTTGTTTATCAATGTAAGCTCAAAACTGATGAATTTGAGACTCTGTATCACTCCTCCATCATCTCGATGATCAAACTCTGTATTGGTTATGATTGTTTAGCCATCAATTTACTTTCTTTGTTTGGTTAAATGGATGAGGTTGGAAGGTGGGAGTATTTGATCAATTGAGCTCCCAAATTAGAACTTTGACGTCAATCTTCAATATCAAATGTTTTGGGGAAGTCGTATTTCCTTAATGGGAGTGATTTTGTAAAAAATCACTCGAAAGTTCTTTTTAATCAGGAAAAATCAGGAAAAATGTGTTTAAGAGCCTAAAGTCTTATCTTTTAGGGGTGGGAATGTTTGGTTGAGTTATTAAGTTTGTGCAGTTTGGAGAGTTAATTAGTTTTAAGGTTGTAGTTTGTGTAGGAAAAATGTTTGATAATCATTGTTTTTTAAAAAAATTAAATTAAGTTTGATGACCTTTTCAAGTTTTATACTCCTTTTATAAAAGTGAAATCAAGCTATTTTTACAATTACTTTTCATCTAATATACATAATGCTAATATACTTTTCATCTAAGGATTATCATCTAATGTTTATTTTCTAAAATCCATATTGATAAAAGCATTATCAATAATATTTTATATAGATGGATTGATCTGATTACAAGGGAAAAAAATTAAACATATCATAAAAATGCTAGAAAATAGGTTCAGTTTGGGATTCAACAATGAAAGCAATTAATTTAAGAAAATAGGTTTTGGTTCATTTGGCTTTCAACAAATTTAGGTTGTTTAATTGAGACAATTTTGTTTATTATGTGGTACTCACACCATCTCTCAAAAAATAAGATTAATTATTAATATGTGAATGAACAACTTTAATCTAATGATTTGACAAATTTACCGTCAGTAATAATTTGTGTTTCTAGATTCATAAGAAAATTACATATTTAAAAATTATTAGAAACACATTATATTAGAATATAATAAAATTGTGTCCTCCGCAACAAACACAATTTTACGAGGAGTTGAATTTATAATTTTCAACCAAACTTTGAATTTTGAAATAGCTTTGAAAAAATATTTAAAATATTTCAAATTAATGTGAAAGTGAAGAGTATTACAAGAAAGAAAATATTGTAGATGTACACAAGTATTATTAATATAAAACATTTACAGGACCTAAGGATTGAACCAAAGATGTAGAGGAGACAAGCTTCATTTATACTGTTCGAGTTCAATTGTTTACTATTAAGTCTATACTTTCTTTATCTCTTGATTTATTTTTAAAGACACCATATCAAGTCAATTAATTTTTCAATATTATATGAATATTGCAAGGTACGTGGTACAAAGAATGGACATGATTCTTGTGGGAATTTCTCTCTGTTACATTATTATTATTTTATACTTATGTTACTTTGATCAAATGTATGTAGTTGTCCTAATTTGTTGAAAACTATTGAGCAAGTTCCCACTAGTTGATTATCAAACTGTGTTATTGTTTTGAATGCTTTGTAAACATTTATATGCTTTGTTTACAAAGCATACATATATATATATATATGTATGCTTTGTTTTAATCAATGGCATCATATATTGGTAGTCTTTGCTTTTATTCAAATGATAATGTCTAAAATAAACCTTATGAGATGAAATCAATCATACATGAAAACACTTTAAGAACTTTAATTTCTTAAAAGTTTGAAGCTCTTGTACTCAGCTTCTAATCTCATCTTCTCTTTCTCAAGTTCAGTATTTGGATTCCTCATCTTCACCAAGTCAATTACACAATTTCTCAAAAATAGGTAGCAACAATCAATTTTCATGACTAGAGGAAATACAACAAGAGAGAGATGAGAATGACAGAGGACGAAGAGGGAGGACAGAGAACAATAGAGAGGAGGGAAAATTATTTAATAAAAGGAGTTGATTGCAACCGTTAAGAATTGAGAGTTAATCGGTGTAATTGTAACTAAACTCATAGTTGGAGATCGGTTTTTGCAATTTCTCCTTTTTTTAACTCGAAATTTCCTTTCAACAAATCCACACCAAACTTGTAGTTTCTGTTTTATTTCTTTAATTTCAAATTACTTTAGTTCAATAGTGTCATTATTCTTCTTTAGGTACTTTACCGATCTAAGAGTTTCGTAGTTATATGCTTATTTAGTTACCTTGAGACAATCATACTGCTTATGGATGAGTTTTCCTACAAAAATATCCAATAGGTACTAGCAAAATATTATGGGTTTTCGATTTTTAAAATTAAACTTATAAACCTTATTTATTGTAGTTTTATTTGTAATGATATCTAATTCTTAGGGAATGATGTTTTCAAAATCAAAGCAAGTAAAGATTTTTAAGAACATGTTTATGTTTTTGTTTTGAGATTAGGTCTGCACTCAAATTACTAAAAGCTTCAAAAGCAAATTTGAGAGATGAAGTTGGTGGAAAAAGGAAGGAGGTATTGTGAACTTAACACACATAAACATACAAAAAGAAAGAAAGGAAGACTCTGGGGTGCCAAGAGATTCTATGATGCATATATGTCATAGTGGATTTAGAGAATTAATTAAGTTGTCATGTGGCTATCCTACAGTTATAATAGTCACTTCGCATATACATATTGTAATGAATTTAGAAACTTAATTGTGACTATCCTATCGTTATGGTATCCACCTCATATTTACAAAGTTGTCTTAGAAGAGTGCTTACCAG

mRNA sequence

CGTGCACCCATTTGTGAATCCGCCTCCATCCCCAAATCCCCGTTGTTTTATGCCGCTCTATAAAATCATTCCCGCAACTTCAATCCTTCAGATCGTCATATCCACTGACTCAATTTCCATTTTCTTGTAATTCCTTTTCATTTTCCGGCGACCAAGTTAAGTTCCCATGGAGACCGGCGGCAAGTTGAAGAAGGGAGCAGGAGGAAGAAAGGGCGGCGGCCCGAAGAAGAAGCCCGTTTCTCGCTCCGTTAAGGCCGGTCTCCAGTTCCCCGTCGGTAGGATCGGTCGATACTTGAAGAATGGCCGGTATGCTCGACGTGTTGGTACTGGAGCTCCGGTCTACTTGGCCGCCGTTCTTGAGTATCTCGCCGCTGAGGAAAATGTTGAATTCAACTTAATGCCCTTGTTCGAATGGGTGTTGGAATTGGCTGGAAATGCAGCCAGAGATAACAAGAAGAACAGAATAATTCCTAGGCATGTATTGTTGGCCATAAGGAACGATGAAGAGCTCGGGAAATTGCTTGCTGGTGTAACAATTGCACATGGTGGTGTTCTTCCAAACATAAACCCAGTTCTGTTGCCAAAGAAAAGTGAGAAGGCAACCACTAAAGAACCAAAATCTCCATCAAAGGCCCCCAAAGCAACCAAATCTCCAAAGAAGGCTTAGGTCTGCACTCAAATTACTAAAAGCTTCAAAAGCAAATTTGAGAGATGAAGTTGGTGGAAAAAGGAAGGAGGTATTGTGAACTTAACACACATAAACATACAAAAAGAAAGAAAGGAAGACTCTGGGGTGCCAAGAGATTCTATGATGCATATATGTCATAGTGGATTTAGAGAATTAATTAAGTTGTCATGTGGCTATCCTACAGTTATAATAGTCACTTCGCATATACATATTGTAATGAATTTAGAAACTTAATTGTGACTATCCTATCGTTATGGTATCCACCTCATATTTACAAAGTTGTCTTAGAAGAGTGCTTACCAG

Coding sequence (CDS)

ATGGAGACCGGCGGCAAGTTGAAGAAGGGAGCAGGAGGAAGAAAGGGCGGCGGCCCGAAGAAGAAGCCCGTTTCTCGCTCCGTTAAGGCCGGTCTCCAGTTCCCCGTCGGTAGGATCGGTCGATACTTGAAGAATGGCCGGTATGCTCGACGTGTTGGTACTGGAGCTCCGGTCTACTTGGCCGCCGTTCTTGAGTATCTCGCCGCTGAGGAAAATGTTGAATTCAACTTAATGCCCTTGTTCGAATGGGTGTTGGAATTGGCTGGAAATGCAGCCAGAGATAACAAGAAGAACAGAATAATTCCTAGGCATGTATTGTTGGCCATAAGGAACGATGAAGAGCTCGGGAAATTGCTTGCTGGTGTAACAATTGCACATGGTGGTGTTCTTCCAAACATAAACCCAGTTCTGTTGCCAAAGAAAAGTGAGAAGGCAACCACTAAAGAACCAAAATCTCCATCAAAGGCCCCCAAAGCAACCAAATCTCCAAAGAAGGCTTAG

Protein sequence

METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYLAAVLEYLAAEENVEFNLMPLFEWVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA

Homology

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BLAST of Clc03G02140 vs. NCBI nr
Match: XP_004149043.1 (histone H2A [Cucumis sativus] >XP_008457544.1 PREDICTED: histone H2A [Cucumis melo] >KAA0033912.1 Histone core [Cucumis melo var. makuwa] >KGN65668.1 hypothetical protein Csa_019600 [Cucumis sativus] >TYK01294.1 Histone core [Cucumis melo var. makuwa])

HSP 1 Score: 280.0 bits (715), Expect = 1.3e-71
Identity = 153/166 (92.17%), Postives = 153/166 (92.17%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60
           METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL
Sbjct: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60

Query: 61  AAVLEYLAAEENVEFNLMPLFEWVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA 120
           AAVLEYLAAE             VLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA
Sbjct: 61  AAVLEYLAAE-------------VLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA 120

Query: 121 GVTIAHGGVLPNINPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA 167
           GVTIAHGGVLPNINPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA
Sbjct: 121 GVTIAHGGVLPNINPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA 153

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BLAST of Clc03G02140 vs. NCBI nr
Match: XP_022134450.1 (histone H2A-like [Momordica charantia])

HSP 1 Score: 273.5 bits (698), Expect = 1.2e-69
Identity = 150/166 (90.36%), Postives = 150/166 (90.36%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60
           METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL
Sbjct: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60

Query: 61  AAVLEYLAAEENVEFNLMPLFEWVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA 120
           AAVLEYLAAE             VLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA
Sbjct: 61  AAVLEYLAAE-------------VLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA 120

Query: 121 GVTIAHGGVLPNINPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA 167
           GVTIAHGGVLPNINPVLLPKKSEKA TKEPKSPSK  KATKSPKKA
Sbjct: 121 GVTIAHGGVLPNINPVLLPKKSEKAVTKEPKSPSKVTKATKSPKKA 153

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BLAST of Clc03G02140 vs. NCBI nr
Match: XP_038895656.1 (histone H2A [Benincasa hispida])

HSP 1 Score: 270.4 bits (690), Expect = 1.0e-68
Identity = 148/166 (89.16%), Postives = 150/166 (90.36%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60
           METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLK+GRYARRVGTGAPVY+
Sbjct: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKHGRYARRVGTGAPVYM 60

Query: 61  AAVLEYLAAEENVEFNLMPLFEWVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA 120
           AAVLEYLAAE             VLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA
Sbjct: 61  AAVLEYLAAE-------------VLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA 120

Query: 121 GVTIAHGGVLPNINPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA 167
           GVTIAHGGVLPNINPVLLPKKSEKA  KEPKSPSKA KATKSPKKA
Sbjct: 121 GVTIAHGGVLPNINPVLLPKKSEKAAAKEPKSPSKASKATKSPKKA 153

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BLAST of Clc03G02140 vs. NCBI nr
Match: XP_022964993.1 (histone H2A [Cucurbita moschata] >XP_022970475.1 histone H2A [Cucurbita maxima] >XP_023520345.1 histone H2A [Cucurbita pepo subsp. pepo] >KAG6583464.1 hypothetical protein SDJN03_19396, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019222.1 hypothetical protein SDJN02_18180 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 267.7 bits (683), Expect = 6.7e-68
Identity = 147/166 (88.55%), Postives = 149/166 (89.76%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60
           M++  KLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL
Sbjct: 1   MDSSAKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60

Query: 61  AAVLEYLAAEENVEFNLMPLFEWVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA 120
           AAVLEYLAAE             VLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA
Sbjct: 61  AAVLEYLAAE-------------VLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA 120

Query: 121 GVTIAHGGVLPNINPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA 167
           GVTIAHGGVLPNINPVLLPKKSEKA TKEPKSPSKA KATKSPKKA
Sbjct: 121 GVTIAHGGVLPNINPVLLPKKSEKAATKEPKSPSKASKATKSPKKA 153

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BLAST of Clc03G02140 vs. NCBI nr
Match: XP_022997818.1 (histone H2A-like [Cucurbita maxima] >XP_023523186.1 histone H2A-like [Cucurbita pepo subsp. pepo] >KAG6607207.1 hypothetical protein SDJN03_00549, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036893.1 hypothetical protein SDJN02_00513 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 265.4 bits (677), Expect = 3.3e-67
Identity = 144/166 (86.75%), Postives = 147/166 (88.55%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60
           M+  GKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVY+
Sbjct: 1   MDASGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYM 60

Query: 61  AAVLEYLAAEENVEFNLMPLFEWVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA 120
           AAVLEYLAAE             VLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA
Sbjct: 61  AAVLEYLAAE-------------VLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA 120

Query: 121 GVTIAHGGVLPNINPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA 167
           GVTIAHGGVLPNINPVLLPKKSEKA +KEPKSPSK PK  KSPKKA
Sbjct: 121 GVTIAHGGVLPNINPVLLPKKSEKAASKEPKSPSKTPKGAKSPKKA 153

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BLAST of Clc03G02140 vs. ExPASy Swiss-Prot
Match: Q9M531 (Histone H2A OS=Euphorbia esula OX=3993 PE=2 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 2.7e-64
Identity = 139/169 (82.25%), Postives = 146/169 (86.39%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60
           M+TG KLKKGAG RKGGGPKKKPVSRSVKAGLQFPVGRIGR+LK GRYA+RVG+GAPVYL
Sbjct: 1   MDTGAKLKKGAGERKGGGPKKKPVSRSVKAGLQFPVGRIGRFLKKGRYAQRVGSGAPVYL 60

Query: 61  AAVLEYLAAEENVEFNLMPLFEWVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA 120
           AAVLEYLAAE             VLELAGNAARDNKKNRIIPRHVLLA+RNDEELGKLLA
Sbjct: 61  AAVLEYLAAE-------------VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLA 120

Query: 121 GVTIAHGGVLPNINPVLLPKKSEK---ATTKEPKSPSKAPKATKSPKKA 167
           GVTIAHGGVLPNINPVLLPKK+EK   A TKEPKSP+   KATKSPKKA
Sbjct: 121 GVTIAHGGVLPNINPVLLPKKAEKAAAAATKEPKSPA---KATKSPKKA 153

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BLAST of Clc03G02140 vs. ExPASy Swiss-Prot
Match: Q2HU65 (Probable histone H2A.2 OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC149210g4v1 PE=3 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 2.8e-61
Identity = 132/168 (78.57%), Postives = 142/168 (84.52%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60
           M+   K KKGAGGRKGGGP+KK V+RS++AGLQFPVGRIGRYLK GRYA+RVGTGAPVYL
Sbjct: 1   MDASTKTKKGAGGRKGGGPRKKSVTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYL 60

Query: 61  AAVLEYLAAEENVEFNLMPLFEWVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA 120
           AAVLEYLAAE             VLELAGNAARDNKKNRIIPRHVLLA+RNDEELGKLLA
Sbjct: 61  AAVLEYLAAE-------------VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLA 120

Query: 121 GVTIAHGGVLPNINPVLLPKKSEKATT--KEPKSPSKAPKATKSPKKA 167
           GVTIAHGGVLPNINPVLLPKK+E++ T  KEPKSP   PKA KSPKKA
Sbjct: 121 GVTIAHGGVLPNINPVLLPKKTERSNTVSKEPKSPK--PKAGKSPKKA 153

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BLAST of Clc03G02140 vs. ExPASy Swiss-Prot
Match: Q9LZ46 (Probable histone H2A.4 OS=Arabidopsis thaliana OX=3702 GN=At5g02560 PE=1 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 4.8e-61
Identity = 134/169 (79.29%), Postives = 144/169 (85.21%), Query Frame = 0


Query: 1   METGGKLKKGAGGRK-GGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVY 60
           M++G K+KKGA GR+ GGGPKKKPVSRSVK+GLQFPVGRIGRYLK GRY++RVGTGAPVY
Sbjct: 1   MDSGTKVKKGAAGRRSGGGPKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVY 60

Query: 61  LAAVLEYLAAEENVEFNLMPLFEWVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLL 120
           LAAVLEYLAAE             VLELAGNAARDNKKNRIIPRHVLLA+RNDEELG LL
Sbjct: 61  LAAVLEYLAAE-------------VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLL 120

Query: 121 AGVTIAHGGVLPNINPVLLPKKSEKA--TTKEPKSPSKAPKATKSPKKA 167
            GVTIAHGGVLPNINP+LLPKKSEKA  TTK PKSPS   KATKSPKK+
Sbjct: 121 KGVTIAHGGVLPNINPILLPKKSEKAASTTKTPKSPS---KATKSPKKS 153

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BLAST of Clc03G02140 vs. ExPASy Swiss-Prot
Match: A2WQG7 (Probable histone H2A.5 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_002060 PE=3 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.0e-59
Identity = 135/166 (81.33%), Postives = 139/166 (83.73%), Query Frame = 0


Query: 4   GGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYLAAV 63
           GGKLKKGA GRK GGP+KK VSRSVKAGLQFPVGRIGRYLK GRYA+R+GTGAPVYLAAV
Sbjct: 9   GGKLKKGAAGRKAGGPRKKAVSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAPVYLAAV 68

Query: 64  LEYLAAEENVEFNLMPLFEWVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVT 123
           LEYLAAE             VLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVT
Sbjct: 69  LEYLAAE-------------VLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVT 128

Query: 124 IAHGGVLPNINPVLLPKK-SEKATT--KEPKSPSKAPKATKSPKKA 167
           IAHGGVLPNINPVLLPKK +EKA    KE KSP KA  A KSPKKA
Sbjct: 129 IAHGGVLPNINPVLLPKKTAEKAAAAGKEAKSPKKA--AGKSPKKA 159

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BLAST of Clc03G02140 vs. ExPASy Swiss-Prot
Match: Q94E96 (Probable histone H2A.5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0502700 PE=2 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.0e-59
Identity = 135/166 (81.33%), Postives = 139/166 (83.73%), Query Frame = 0


Query: 4   GGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYLAAV 63
           GGKLKKGA GRK GGP+KK VSRSVKAGLQFPVGRIGRYLK GRYA+R+GTGAPVYLAAV
Sbjct: 9   GGKLKKGAAGRKAGGPRKKAVSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAPVYLAAV 68

Query: 64  LEYLAAEENVEFNLMPLFEWVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVT 123
           LEYLAAE             VLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVT
Sbjct: 69  LEYLAAE-------------VLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVT 128

Query: 124 IAHGGVLPNINPVLLPKK-SEKATT--KEPKSPSKAPKATKSPKKA 167
           IAHGGVLPNINPVLLPKK +EKA    KE KSP KA  A KSPKKA
Sbjct: 129 IAHGGVLPNINPVLLPKKTAEKAAAAGKEAKSPKKA--AGKSPKKA 159

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BLAST of Clc03G02140 vs. ExPASy TrEMBL
Match: A0A5D3BQ44 (Histone H2A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00860 PE=3 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 6.3e-72
Identity = 153/166 (92.17%), Postives = 153/166 (92.17%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60
           METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL
Sbjct: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60

Query: 61  AAVLEYLAAEENVEFNLMPLFEWVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA 120
           AAVLEYLAAE             VLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA
Sbjct: 61  AAVLEYLAAE-------------VLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA 120

Query: 121 GVTIAHGGVLPNINPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA 167
           GVTIAHGGVLPNINPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA
Sbjct: 121 GVTIAHGGVLPNINPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA 153

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BLAST of Clc03G02140 vs. ExPASy TrEMBL
Match: A0A0A0LV77 (Histone H2A OS=Cucumis sativus OX=3659 GN=Csa_1G481210 PE=3 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 6.3e-72
Identity = 153/166 (92.17%), Postives = 153/166 (92.17%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60
           METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL
Sbjct: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60

Query: 61  AAVLEYLAAEENVEFNLMPLFEWVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA 120
           AAVLEYLAAE             VLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA
Sbjct: 61  AAVLEYLAAE-------------VLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA 120

Query: 121 GVTIAHGGVLPNINPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA 167
           GVTIAHGGVLPNINPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA
Sbjct: 121 GVTIAHGGVLPNINPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA 153

[Close]

BLAST of Clc03G02140 vs. ExPASy TrEMBL
Match: A0A1S3C5R1 (Histone H2A OS=Cucumis melo OX=3656 GN=LOC103497210 PE=3 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 6.3e-72
Identity = 153/166 (92.17%), Postives = 153/166 (92.17%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60
           METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL
Sbjct: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60

Query: 61  AAVLEYLAAEENVEFNLMPLFEWVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA 120
           AAVLEYLAAE             VLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA
Sbjct: 61  AAVLEYLAAE-------------VLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA 120

Query: 121 GVTIAHGGVLPNINPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA 167
           GVTIAHGGVLPNINPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA
Sbjct: 121 GVTIAHGGVLPNINPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA 153

[Close]

BLAST of Clc03G02140 vs. ExPASy TrEMBL
Match: A0A6J1BYB9 (Histone H2A OS=Momordica charantia OX=3673 GN=LOC111006694 PE=3 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 5.9e-70
Identity = 150/166 (90.36%), Postives = 150/166 (90.36%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60
           METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL
Sbjct: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60

Query: 61  AAVLEYLAAEENVEFNLMPLFEWVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA 120
           AAVLEYLAAE             VLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA
Sbjct: 61  AAVLEYLAAE-------------VLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA 120

Query: 121 GVTIAHGGVLPNINPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA 167
           GVTIAHGGVLPNINPVLLPKKSEKA TKEPKSPSK  KATKSPKKA
Sbjct: 121 GVTIAHGGVLPNINPVLLPKKSEKAVTKEPKSPSKVTKATKSPKKA 153

[Close]

BLAST of Clc03G02140 vs. ExPASy TrEMBL
Match: A0A6J1I2Z0 (Histone H2A OS=Cucurbita maxima OX=3661 GN=LOC111469444 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.2e-68
Identity = 147/166 (88.55%), Postives = 149/166 (89.76%), Query Frame = 0


Query: 1   METGGKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60
           M++  KLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL
Sbjct: 1   MDSSAKLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYL 60

Query: 61  AAVLEYLAAEENVEFNLMPLFEWVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA 120
           AAVLEYLAAE             VLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA
Sbjct: 61  AAVLEYLAAE-------------VLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLA 120

Query: 121 GVTIAHGGVLPNINPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA 167
           GVTIAHGGVLPNINPVLLPKKSEKA TKEPKSPSKA KATKSPKKA
Sbjct: 121 GVTIAHGGVLPNINPVLLPKKSEKAATKEPKSPSKASKATKSPKKA 153

[Close]

BLAST of Clc03G02140 vs. TAIR 10
Match: AT5G02560.1 (histone H2A 12 )

HSP 1 Score: 235.3 bits (599), Expect = 3.4e-62
Identity = 134/169 (79.29%), Postives = 144/169 (85.21%), Query Frame = 0


Query: 1   METGGKLKKGAGGRK-GGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVY 60
           M++G K+KKGA GR+ GGGPKKKPVSRSVK+GLQFPVGRIGRYLK GRY++RVGTGAPVY
Sbjct: 1   MDSGTKVKKGAAGRRSGGGPKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVY 60

Query: 61  LAAVLEYLAAEENVEFNLMPLFEWVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLL 120
           LAAVLEYLAAE             VLELAGNAARDNKKNRIIPRHVLLA+RNDEELG LL
Sbjct: 61  LAAVLEYLAAE-------------VLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLL 120

Query: 121 AGVTIAHGGVLPNINPVLLPKKSEKA--TTKEPKSPSKAPKATKSPKKA 167
            GVTIAHGGVLPNINP+LLPKKSEKA  TTK PKSPS   KATKSPKK+
Sbjct: 121 KGVTIAHGGVLPNINPILLPKKSEKAASTTKTPKSPS---KATKSPKKS 153

[Close]

BLAST of Clc03G02140 vs. TAIR 10
Match: AT5G02560.2 (histone H2A 12 )

HSP 1 Score: 234.2 bits (596), Expect = 7.6e-62
Identity = 136/180 (75.56%), Postives = 150/180 (83.33%), Query Frame = 0


Query: 1   METGGKLKKGAGGRK-GGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVY 60
           M++G K+KKGA GR+ GGGPKKKPVSRSVK+GLQFPVGRIGRYLK GRY++RVGTGAPVY
Sbjct: 1   MDSGTKVKKGAAGRRSGGGPKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVY 60

Query: 61  LAAVLEYLAAEENVEF-NLMPLFEW----------VLELAGNAARDNKKNRIIPRHVLLA 120
           LAAVLEYLAAE +  F ++  L  +          VLELAGNAARDNKKNRIIPRHVLLA
Sbjct: 61  LAAVLEYLAAENSCGFCSVASLTIYRCRMSSSDFRVLELAGNAARDNKKNRIIPRHVLLA 120

Query: 121 IRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKSEKA--TTKEPKSPSKAPKATKSPKKA 167
           +RNDEELG LL GVTIAHGGVLPNINP+LLPKKSEKA  TTK PKSPS   KATKSPKK+
Sbjct: 121 VRNDEELGTLLKGVTIAHGGVLPNINPILLPKKSEKAASTTKTPKSPS---KATKSPKKS 177

[Close]

BLAST of Clc03G02140 vs. TAIR 10
Match: AT5G59870.1 (histone H2A 6 )

HSP 1 Score: 197.6 bits (501), Expect = 7.9e-51
Identity = 115/161 (71.43%), Postives = 128/161 (79.50%), Query Frame = 0


Query: 1   METGGKLKKGAGGRK-GGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVY 60
           ME+ GK+KK  GGRK  G PK K VS+S+KAGLQFPVGRI R+LK GRYA+R+G GAPVY
Sbjct: 1   MESTGKVKKAFGGRKPPGAPKTKSVSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVY 60

Query: 61  LAAVLEYLAAEENVEFNLMPLFEWVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLL 120
           +AAVLEYLAAE             VLELAGNAARDNKK+RIIPRH+LLAIRNDEELGKLL
Sbjct: 61  MAAVLEYLAAE-------------VLELAGNAARDNKKSRIIPRHLLLAIRNDEELGKLL 120

Query: 121 AGVTIAHGGVLPNINPVLLPKKS--EKATTKEPKSPSKAPK 159
           +GVTIAHGGVLPNIN VLLPKKS  + A  K  KSP K+PK
Sbjct: 121 SGVTIAHGGVLPNINSVLLPKKSATKPAEEKATKSPVKSPK 148

[Close]

BLAST of Clc03G02140 vs. TAIR 10
Match: AT5G27670.1 (histone H2A 7 )

HSP 1 Score: 192.2 bits (487), Expect = 3.3e-49
Identity = 114/161 (70.81%), Postives = 125/161 (77.64%), Query Frame = 0


Query: 6   KLKKGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYLAAVLE 65
           K  +GAGGRK GG +KK VS+SVKAGLQFPVGRI RYLK GRYA R G+GAPVYLAAVLE
Sbjct: 9   KPTRGAGGRK-GGDRKKSVSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAPVYLAAVLE 68

Query: 66  YLAAEENVEFNLMPLFEWVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIA 125
           YLAAE             VLELAGNAARDNKKNRI PRH+ LAIRNDEELG+LL GVTIA
Sbjct: 69  YLAAE-------------VLELAGNAARDNKKNRINPRHLCLAIRNDEELGRLLHGVTIA 128

Query: 126 HGGVLPNINPVLLPKKSEKATTKEPKSPSKAPKATKSPKKA 167
            GGVLPNINPVLLPKKS  ++++  K+      ATKSPKKA
Sbjct: 129 SGGVLPNINPVLLPKKSTASSSQAEKA-----SATKSPKKA 150

[Close]

BLAST of Clc03G02140 vs. TAIR 10
Match: AT3G20670.1 (histone H2A 13 )

HSP 1 Score: 167.9 bits (424), Expect = 6.7e-42
Identity = 91/133 (68.42%), Postives = 101/133 (75.94%), Query Frame = 0


Query: 10  GAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYARRVGTGAPVYLAAVLEYLAA 69
           G G   G G  KK  SRS KAGLQFPVGRI R+LKNG+YA RVG GAPVYLAAVLEYLAA
Sbjct: 3   GRGKTLGSGVAKKSTSRSSKAGLQFPVGRIARFLKNGKYATRVGAGAPVYLAAVLEYLAA 62

Query: 70  EENVEFNLMPLFEWVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGV 129
           E             VLELAGNAARDNKK RI+PRH+ LA+RNDEEL KLL  VTIA+GGV
Sbjct: 63  E-------------VLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGV 122

Query: 130 LPNINPVLLPKKS 143
           +PNI+ +LLPKK+
Sbjct: 123 MPNIHSLLLPKKA 122

The following BLAST results are available for this feature:

BLAST of Clc03G02140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149043.1	1.3e-71	92.17	histone H2A [Cucumis sativus] >XP_008457544.1 PREDICTED: histone H2A [Cucumis me...	[more]
XP_022134450.1	1.2e-69	90.36	histone H2A-like [Momordica charantia]	[more]
XP_038895656.1	1.0e-68	89.16	histone H2A [Benincasa hispida]	[more]
XP_022964993.1	6.7e-68	88.55	histone H2A [Cucurbita moschata] >XP_022970475.1 histone H2A [Cucurbita maxima] ...	[more]
XP_022997818.1	3.3e-67	86.75	histone H2A-like [Cucurbita maxima] >XP_023523186.1 histone H2A-like [Cucurbita ...	[more]

BLAST of Clc03G02140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M531	2.7e-64	82.25	Histone H2A OS=Euphorbia esula OX=3993 PE=2 SV=1	[more]
Q2HU65	2.8e-61	78.57	Probable histone H2A.2 OS=Medicago truncatula OX=3880 GN=MtrDRAFT_AC149210g4v1 P...	[more]
Q9LZ46	4.8e-61	79.29	Probable histone H2A.4 OS=Arabidopsis thaliana OX=3702 GN=At5g02560 PE=1 SV=1	[more]
A2WQG7	2.0e-59	81.33	Probable histone H2A.5 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_002060 PE=3...	[more]
Q94E96	2.0e-59	81.33	Probable histone H2A.5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0502700 ...	[more]

BLAST of Clc03G02140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BQ44	6.3e-72	92.17	Histone H2A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00860 PE=...	[more]
A0A0A0LV77	6.3e-72	92.17	Histone H2A OS=Cucumis sativus OX=3659 GN=Csa_1G481210 PE=3 SV=1	[more]
A0A1S3C5R1	6.3e-72	92.17	Histone H2A OS=Cucumis melo OX=3656 GN=LOC103497210 PE=3 SV=1	[more]
A0A6J1BYB9	5.9e-70	90.36	Histone H2A OS=Momordica charantia OX=3673 GN=LOC111006694 PE=3 SV=1	[more]
A0A6J1I2Z0	3.2e-68	88.55	Histone H2A OS=Cucurbita maxima OX=3661 GN=LOC111469444 PE=3 SV=1	[more]

BLAST of Clc03G02140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02560.1	3.4e-62	79.29	histone H2A 12	[more]
AT5G02560.2	7.6e-62	75.56	histone H2A 12	[more]
AT5G59870.1	7.9e-51	71.43	histone H2A 6	[more]
AT5G27670.1	3.3e-49	70.81	histone H2A 7	[more]
AT3G20670.1	6.7e-42	68.42	histone H2A 13	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002119	Histone H2A	PRINTS	PR00620	HISTONEH2A	coord: 51..66 score: 86.43 coord: 22..44 score: 69.23
IPR002119	Histone H2A	SMART	SM00414	h2a4	coord: 11..144 e-value: 3.4E-74 score: 262.5
IPR002119	Histone H2A	CDD	cd00074	H2A	coord: 23..141 e-value: 1.02144E-64 score: 192.165
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 10..152 e-value: 7.9E-61 score: 205.6
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 25..141
IPR032454	Histone H2A, C-terminal domain	PFAM	PF16211	Histone_H2A_C	coord: 113..146 e-value: 1.4E-18 score: 66.3
None	No IPR available	PIRSR	PIRSR037942-1	PIRSR037942-1	coord: 16..163 e-value: 1.4E-47 score: 160.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR23430:SF304	HISTONE H2A	coord: 7..158
None	No IPR available	PANTHER	PTHR23430	HISTONE H2A	coord: 7..158
IPR032458	Histone H2A conserved site	PROSITE	PS00046	HISTONE_H2A	coord: 30..36

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc03G02140.2	Clc03G02140.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031507	heterochromatin assembly
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity