Clc03G02100 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc03G02100
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	zinc finger protein ZAT12-like
Location	ClcChr03: 1956130 .. 1956917 (+)
RNA-Seq Expression	Clc03G02100
Synteny	Clc03G02100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTTTAAGCTTACTATTTTTCTCATCTCTCTCCACACGCACCCATTAATCCCAAGGTCAAATCCGCCATTTTCTTCACAAAATCCAACCTTCTTTTTCTATAAGACCCTTTCCCACAATTCCCTCCCATTTCCATTTCCTACCCATTTCCTCCCATTCCAAATTCAATACTCTCAATAATAAACTTCCTACAATAGTTCCCGTTCTTTGTTCGTCTTAGTTAGATCTAGAACTATTCTCAACTATTCCTATAGCCATAAATAAAACACGAAAACCTTCGATTCGCAACGAATATAGTTTTCTTGTTCTGTCTCCAAATTTTATGAAGAGAGAAAGGGAAGGGGAATTTGAAATTTTAGATATGGTAGATTGCTTAATGTTGTTATCCAAAGTGGAGGAGCCATGGCGGAAGAATAATTCTCCGGCGGCGGATTCCGGCAAAGTTTTTGTGTGCAAAACGTGTAATAGGGAATTTTCATCGTTTCAAGCTTTGGGAGGGCATAGGGCCAGCCACAAGAAGCCCAATTTCAAAGACGCTAACGGCCCACCAACCAAGCCCAAGGCCCACGAATGTCCGATTTGTGGCCTTGATTTTCCGATTGGACAAGCCTTGGGCGGCCACATGAGGCGCCACCGGACCACCGCCGCTGCCGCCACCGTGGAAAAATCCGATGGCTATGGGAAAAAGGGTTTTGGGTTGGATTTGAACTTGACGCCAGTAGAAAACAATTTGAAGTTGCAGTTGACTACTCCTTTTGTAGATTGTTTTAATTAATTATTTATTTTG

mRNA sequence

ATTTTTTAAGCTTACTATTTTTCTCATCTCTCTCCACACGCACCCATTAATCCCAAGGTCAAATCCGCCATTTTCTTCACAAAATCCAACCTTCTTTTTCTATAAGACCCTTTCCCACAATTCCCTCCCATTTCCATTTCCTACCCATTTCCTCCCATTCCAAATTCAATACTCTCAATAATAAACTTCCTACAATAGTTCCCGTTCTTTGTTCGTCTTAGTTAGATCTAGAACTATTCTCAACTATTCCTATAGCCATAAATAAAACACGAAAACCTTCGATTCGCAACGAATATAGTTTTCTTGTTCTGTCTCCAAATTTTATGAAGAGAGAAAGGGAAGGGGAATTTGAAATTTTAGATATGGTAGATTGCTTAATGTTGTTATCCAAAGTGGAGGAGCCATGGCGGAAGAATAATTCTCCGGCGGCGGATTCCGGCAAAGTTTTTGTGTGCAAAACGTGTAATAGGGAATTTTCATCGTTTCAAGCTTTGGGAGGGCATAGGGCCAGCCACAAGAAGCCCAATTTCAAAGACGCTAACGGCCCACCAACCAAGCCCAAGGCCCACGAATGTCCGATTTGTGGCCTTGATTTTCCGATTGGACAAGCCTTGGGCGGCCACATGAGGCGCCACCGGACCACCGCCGCTGCCGCCACCGTGGAAAAATCCGATGGCTATGGGAAAAAGGGTTTTGGGTTGGATTTGAACTTGACGCCAGTAGAAAACAATTTGAAGTTGCAGTTGACTACTCCTTTTGTAGATTGTTTTAATTAATTATTTATTTTG

Coding sequence (CDS)

ATGAAGAGAGAAAGGGAAGGGGAATTTGAAATTTTAGATATGGTAGATTGCTTAATGTTGTTATCCAAAGTGGAGGAGCCATGGCGGAAGAATAATTCTCCGGCGGCGGATTCCGGCAAAGTTTTTGTGTGCAAAACGTGTAATAGGGAATTTTCATCGTTTCAAGCTTTGGGAGGGCATAGGGCCAGCCACAAGAAGCCCAATTTCAAAGACGCTAACGGCCCACCAACCAAGCCCAAGGCCCACGAATGTCCGATTTGTGGCCTTGATTTTCCGATTGGACAAGCCTTGGGCGGCCACATGAGGCGCCACCGGACCACCGCCGCTGCCGCCACCGTGGAAAAATCCGATGGCTATGGGAAAAAGGGTTTTGGGTTGGATTTGAACTTGACGCCAGTAGAAAACAATTTGAAGTTGCAGTTGACTACTCCTTTTGTAGATTGTTTTAATTAA

Protein sequence

MKREREGEFEILDMVDCLMLLSKVEEPWRKNNSPAADSGKVFVCKTCNREFSSFQALGGHRASHKKPNFKDANGPPTKPKAHECPICGLDFPIGQALGGHMRRHRTTAAAATVEKSDGYGKKGFGLDLNLTPVENNLKLQLTTPFVDCFN

Homology

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BLAST of Clc03G02100 vs. NCBI nr
Match: XP_038895358.1 (zinc finger protein ZAT12-like [Benincasa hispida])

HSP 1 Score: 290.4 bits (742), Expect = 8.7e-75
Identity = 137/151 (90.73%), Postives = 143/151 (94.70%), Query Frame = 0


Query: 1   MKREREGEFEILDMVDCLMLLSKVEEPWRKNNSPAADSGKVFVCKTCNREFSSFQALGGH 60
           MKREREGEFE LDMVDCLMLLSKVEEPWRK+++PAADSGK FVCKTCNREFSSFQALGGH
Sbjct: 1   MKREREGEFEGLDMVDCLMLLSKVEEPWRKSSAPAADSGKAFVCKTCNREFSSFQALGGH 60

Query: 61  RASHKKPNFKDANGPPTKPKAHECPICGLDFPIGQALGGHMRRHRTTA-AAATVEKSDGY 120
           RASHKKPNFKDANGP TKPKAHECPICGL FP+GQALGGHMRRHRTTA  AA VEKSDG 
Sbjct: 61  RASHKKPNFKDANGPLTKPKAHECPICGLHFPMGQALGGHMRRHRTTATTAAVVEKSDGC 120

Query: 121 GKKGFGLDLNLTPVENNLKLQLTTPFVDCFN 151
           GK+GFGLDLNLTP+ENNLKLQLTTPFVDCFN
Sbjct: 121 GKRGFGLDLNLTPIENNLKLQLTTPFVDCFN 151

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BLAST of Clc03G02100 vs. NCBI nr
Match: XP_008457541.1 (PREDICTED: zinc finger protein ZAT12-like [Cucumis melo])

HSP 1 Score: 275.8 bits (704), Expect = 2.2e-70
Identity = 131/151 (86.75%), Postives = 139/151 (92.05%), Query Frame = 0


Query: 1   MKREREGEFEILDMVDCLMLLSKVEEPWRKNNSPAADSGKVFVCKTCNREFSSFQALGGH 60
           MKREREGEFE LDMVDC   LSKVEEPWRKN +PAADSGKVFVCKTCNREFSSFQALGGH
Sbjct: 11  MKREREGEFEALDMVDC---LSKVEEPWRKNTAPAADSGKVFVCKTCNREFSSFQALGGH 70

Query: 61  RASHKKPNFKDANGPPTKPKAHECPICGLDFPIGQALGGHMRRHR--TTAAAATVEKSDG 120
           RASHKKPNFKDANGPPTKPKAH+CPICGL FP+GQALGGHMRRHR  TT AAA +EKSDG
Sbjct: 71  RASHKKPNFKDANGPPTKPKAHDCPICGLHFPMGQALGGHMRRHRTSTTTAAAVLEKSDG 130

Query: 121 YGKKGFGLDLNLTPVENNLKLQLTTPFVDCF 150
             K+GFGLDLNLTP+ENNLKLQL+TPFV+CF
Sbjct: 131 GEKRGFGLDLNLTPIENNLKLQLSTPFVNCF 158

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BLAST of Clc03G02100 vs. NCBI nr
Match: KGN66032.2 (hypothetical protein Csa_019777 [Cucumis sativus])

HSP 1 Score: 257.3 bits (656), Expect = 8.2e-65
Identity = 121/147 (82.31%), Postives = 130/147 (88.44%), Query Frame = 0


Query: 1   MKREREGEFEILDMVDCLMLLSKVEEPWRKNNSPAADSGKVFVCKTCNREFSSFQALGGH 60
           MKREREGEF++LDMVDC   +SKVEEPWR N++PA DSGKVFVCKTCNREFSSFQALGGH
Sbjct: 1   MKREREGEFQVLDMVDC---MSKVEEPWRNNSAPAGDSGKVFVCKTCNREFSSFQALGGH 60

Query: 61  RASHKKPNFKDANGPPTKPKAHECPICGLDFPIGQALGGHMRRHRTTAAAATVEKSDGYG 120
           RASHKKPN KD   PPTKPKAHECPICGL FPIGQALGGHMRRHRT+     VEKSD  G
Sbjct: 61  RASHKKPNSKD---PPTKPKAHECPICGLHFPIGQALGGHMRRHRTSTTTVVVEKSDAGG 120

Query: 121 KKGFGLDLNLTPVENNLKLQLTTPFVD 148
           K+GFGLDLNLTP+ENNLKLQLTTPF+D
Sbjct: 121 KRGFGLDLNLTPIENNLKLQLTTPFLD 141

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BLAST of Clc03G02100 vs. NCBI nr
Match: XP_022949001.1 (zinc finger protein ZAT12-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 236.1 bits (601), Expect = 2.0e-58
Identity = 117/145 (80.69%), Postives = 127/145 (87.59%), Query Frame = 0


Query: 1   MKRERE-GEFEILDMVDCLMLLSKVEEPWRKNN---SPAADSGKVFVCKTCNREFSSFQA 60
           MKRERE GEFE+LDMVDCLMLLSK+EEP RKN    +PAADS K+FVCKTCNREFSSFQA
Sbjct: 1   MKREREGGEFEVLDMVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQA 60

Query: 61  LGGHRASHKKPNFKDANGPPTKPKAHECPICGLDFPIGQALGGHMRRHRTTAAAATVEKS 120
           LGGHR SH KPNF +ANGPPTK KAHECPICGLDFPIGQALGGHMRRHR TAAAA ++KS
Sbjct: 61  LGGHRTSHTKPNF-NANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAVLKKS 120

Query: 121 DGYGKKGFGLDLNLTPVENNLKLQL 142
           DG GK+ F LDLNL P+ENNL L+L
Sbjct: 121 DGCGKRVFELDLNLPPLENNLNLKL 144

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BLAST of Clc03G02100 vs. NCBI nr
Match: XP_022997819.1 (zinc finger protein ZAT12-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 236.1 bits (601), Expect = 2.0e-58
Identity = 118/145 (81.38%), Postives = 127/145 (87.59%), Query Frame = 0


Query: 1   MKRER-EGEFEILDMVDCLMLLSKVEEPWRKNN---SPAADSGKVFVCKTCNREFSSFQA 60
           MKRER EGEFE+LDMVDCLMLLSK+EEP RKN    +PAADS KVFVCKTCNREFSSFQA
Sbjct: 1   MKREREEGEFEVLDMVDCLMLLSKMEEPRRKNGFAPTPAADSDKVFVCKTCNREFSSFQA 60

Query: 61  LGGHRASHKKPNFKDANGPPTKPKAHECPICGLDFPIGQALGGHMRRHRTTAAAATVEKS 120
           LGGHR SH KPNF +ANGPPTK KAHECPICGLDFPIGQALGGHMRRHR TAAAA ++KS
Sbjct: 61  LGGHRTSHTKPNF-NANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRDTAAAAVLKKS 120

Query: 121 DGYGKKGFGLDLNLTPVENNLKLQL 142
           DG GK+ F LDLNL P+ENNL L+L
Sbjct: 121 DGCGKRVFELDLNLPPLENNLNLKL 144

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BLAST of Clc03G02100 vs. ExPASy Swiss-Prot
Match: Q42410 (Zinc finger protein ZAT12 OS=Arabidopsis thaliana OX=3702 GN=ZAT12 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.2e-27
Identity = 70/145 (48.28%), Postives = 85/145 (58.62%), Query Frame = 0


Query: 16  DCLMLLSKVEEPWRKNNSPAADSGKVFVCKTCNREFSSFQALGGHRASHKKPN---FKDA 75
           +CLMLLS+V +     N    D  +VF CKTC ++F SFQALGGHRASHKKPN       
Sbjct: 17  NCLMLLSRVGQ----ENVDGGDQKRVFTCKTCLKQFHSFQALGGHRASHKKPNNDALSSG 76

Query: 76  NGPPTKPKAHECPICGLDFPIGQALGGHMRRHRTTAAAA---------------TVEKSD 135
                K  +H CPICG++FP+GQALGGHMRRHR  + AA               T  K  
Sbjct: 77  LMKKVKTSSHPCPICGVEFPMGQALGGHMRRHRNESGAAGGALVTRALLPEPTVTTLKKS 136

Query: 136 GYGKKGFGLDLNLTPVEN-NLKLQL 142
             GK+   LDL+L  V+N NLKL+L
Sbjct: 137 SSGKRVACLDLSLGMVDNLNLKLEL 157

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BLAST of Clc03G02100 vs. ExPASy Swiss-Prot
Match: Q9SLD4 (Zinc finger protein ZAT11 OS=Arabidopsis thaliana OX=3702 GN=ZAT11 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.5e-24
Identity = 71/169 (42.01%), Postives = 89/169 (52.66%), Query Frame = 0


Query: 1   MKRER---EGEFEILDMVDCLMLLSKVE--EPWRKNNSPAADSGKVFVCKTCNREFSSFQ 60
           MKRER   E   + +D+  CLM+L++    +    N    + +   F CKTCN+ FSSFQ
Sbjct: 1   MKRERSDFEESLKNIDIAKCLMILAQTSMVKQIGLNQHTESHTSNQFECKTCNKRFSSFQ 60

Query: 61  ALGGHRASHKKPNF----KDANGPPTKPKA---HECPICGLDFPIGQALGGHMRRHRTTA 120
           ALGGHRASHKKP      KD        K    H+C IC   F  GQALGGHMRRHR++ 
Sbjct: 61  ALGGHRASHKKPKLTVEQKDVKHLSNDYKGNHFHKCSICSQSFGTGQALGGHMRRHRSSM 120

Query: 121 A-----------AATVEKSDGYGKKGFGLDLNLTPVENNLKLQLTTPFV 147
                       +  V K  G  K+   LDLNLTP+EN+L+      FV
Sbjct: 121 TVEPSFISPMIPSMPVLKRCGSSKRILSLDLNLTPLENDLEYIFGKTFV 169

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BLAST of Clc03G02100 vs. ExPASy Swiss-Prot
Match: Q9LX85 (Zinc finger protein ZAT8 OS=Arabidopsis thaliana OX=3702 GN=ZAT8 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 5.2e-22
Identity = 70/162 (43.21%), Postives = 85/162 (52.47%), Query Frame = 0


Query: 5   REGEFEILD--MVDCLMLLSKVEEPWRKNNSPAADSGKVFVCKTCNREFSSFQALGGHRA 64
           R  E EI++     CLMLLS+V E             +VF CKTC +EFSSFQALGGHRA
Sbjct: 4   RSEEVEIVEDTAAKCLMLLSRVGE------CGGGGEKRVFRCKTCLKEFSSFQALGGHRA 63

Query: 65  SHKK-PNFKD-------ANGPPTKPKAHECPICGLDFPIGQALGGHMRRHRTTAAA---- 124
           SHKK  N  D       +N       +H CPICG++FP+GQALGGHMRRHR+  A+    
Sbjct: 64  SHKKLINSSDPSLLGSLSNKKTKTATSHPCPICGVEFPMGQALGGHMRRHRSEKASPGTL 123

Query: 125 -----------ATVEKSDGYGKKGFGLDLNLTPVENNLKLQL 142
                       T  K    GK+   LDL+      N KL+L
Sbjct: 124 VTRSFLPETTTVTTLKKSSSGKRVACLDLDSMESLVNWKLEL 159

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BLAST of Clc03G02100 vs. ExPASy Swiss-Prot
Match: Q9LFG0 (Zinc finger protein ZAT18 OS=Arabidopsis thaliana OX=3702 GN=ZAT18 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 8.9e-22
Identity = 65/159 (40.88%), Postives = 88/159 (55.35%), Query Frame = 0


Query: 1   MKRER---EGEFEILDMVDCLMLLSK----VEEPWRKNNSPAADSGKVFVCKTCNREFSS 60
           MKR+R   E   + +D+V+ LM+LS+     +   +++     +    F CKTCNR+F S
Sbjct: 1   MKRDRSDYEESMKHIDIVESLMMLSRSFVVKQIDVKQSTGSKTNHNNHFECKTCNRKFDS 60

Query: 61  FQALGGHRASHKKPNF----KDANGPPTKPKAHECPICGLDFPIGQALGGHMRRHRTT-A 120
           FQALGGHRASHKKP      +       +   H+C IC   F  GQALGGHMR+HRT+  
Sbjct: 61  FQALGGHRASHKKPKLIVDQEQVKHRNKENDMHKCTICDQMFGTGQALGGHMRKHRTSMI 120

Query: 121 AAATVEKSDGYGKKGFG--------LDLNLTPVENNLKL 140
              ++  S  Y +  F         LDLNLTP+EN+L L
Sbjct: 121 TEQSIVPSVVYSRPVFNRCSSSKEILDLNLTPLENDLVL 159

[Close]

BLAST of Clc03G02100 vs. ExPASy Swiss-Prot
Match: Q42453 (Zinc finger protein ZAT7 OS=Arabidopsis thaliana OX=3702 GN=ZAT7 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-21
Identity = 65/147 (44.22%), Postives = 78/147 (53.06%), Query Frame = 0


Query: 17  CLMLLSKVEEPWRKNNSPAADSGKVFVCKTCNREFSSFQALGGHRASHKK------PNFK 76
           CLMLLS+V E             +VF CKTC +EFSSFQALGGHRASHKK      P+  
Sbjct: 19  CLMLLSRVGE----CGGGCGGDERVFRCKTCLKEFSSFQALGGHRASHKKLINSDNPSLL 78

Query: 77  DANGPPTKPKAHECPICGLDFPIGQALGGHMRRHRT--------------TAAAATVEKS 136
            +        +H CPICG+ FP+GQALGGHMRRHR                    T  K 
Sbjct: 79  GSLSNKKTKTSHPCPICGVKFPMGQALGGHMRRHRNEKVSGSLVTRSFLPETTTVTALKK 138

Query: 137 DGYGKKGFGLDLNLTPVEN--NLKLQL 142
              GK+   LDL+L  +E+  N KL+L
Sbjct: 139 FSSGKRVACLDLDLDSMESLVNWKLEL 161

[Close]

BLAST of Clc03G02100 vs. ExPASy TrEMBL
Match: A0A1S3C722 (zinc finger protein ZAT12-like OS=Cucumis melo OX=3656 GN=LOC103497207 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.1e-70
Identity = 131/151 (86.75%), Postives = 139/151 (92.05%), Query Frame = 0


Query: 1   MKREREGEFEILDMVDCLMLLSKVEEPWRKNNSPAADSGKVFVCKTCNREFSSFQALGGH 60
           MKREREGEFE LDMVDC   LSKVEEPWRKN +PAADSGKVFVCKTCNREFSSFQALGGH
Sbjct: 11  MKREREGEFEALDMVDC---LSKVEEPWRKNTAPAADSGKVFVCKTCNREFSSFQALGGH 70

Query: 61  RASHKKPNFKDANGPPTKPKAHECPICGLDFPIGQALGGHMRRHR--TTAAAATVEKSDG 120
           RASHKKPNFKDANGPPTKPKAH+CPICGL FP+GQALGGHMRRHR  TT AAA +EKSDG
Sbjct: 71  RASHKKPNFKDANGPPTKPKAHDCPICGLHFPMGQALGGHMRRHRTSTTTAAAVLEKSDG 130

Query: 121 YGKKGFGLDLNLTPVENNLKLQLTTPFVDCF 150
             K+GFGLDLNLTP+ENNLKLQL+TPFV+CF
Sbjct: 131 GEKRGFGLDLNLTPIENNLKLQLSTPFVNCF 158

[Close]

BLAST of Clc03G02100 vs. ExPASy TrEMBL
Match: A0A0A0LUQ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G481720 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.2e-66
Identity = 123/149 (82.55%), Postives = 132/149 (88.59%), Query Frame = 0


Query: 1   MKREREGEFEILDMVDCLMLLSKVEEPWRKNNSPAADSGKVFVCKTCNREFSSFQALGGH 60
           MKREREGEF++LDMVDC   +SKVEEPWR N++PA DSGKVFVCKTCNREFSSFQALGGH
Sbjct: 12  MKREREGEFQVLDMVDC---MSKVEEPWRNNSAPAGDSGKVFVCKTCNREFSSFQALGGH 71

Query: 61  RASHKKPNFKDANGPPTKPKAHECPICGLDFPIGQALGGHMRRHRTTAAAATVEKSDGYG 120
           RASHKKPN KD   PPTKPKAHECPICGL FPIGQALGGHMRRHRT+     VEKSD  G
Sbjct: 72  RASHKKPNSKD---PPTKPKAHECPICGLHFPIGQALGGHMRRHRTSTTTVVVEKSDAGG 131

Query: 121 KKGFGLDLNLTPVENNLKLQLTTPFVDCF 150
           K+GFGLDLNLTP+ENNLKLQLTTPFV+CF
Sbjct: 132 KRGFGLDLNLTPIENNLKLQLTTPFVNCF 154

[Close]

BLAST of Clc03G02100 vs. ExPASy TrEMBL
Match: A0A6J1KCM4 (zinc finger protein ZAT12-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492663 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 9.5e-59
Identity = 118/145 (81.38%), Postives = 127/145 (87.59%), Query Frame = 0


Query: 1   MKRER-EGEFEILDMVDCLMLLSKVEEPWRKNN---SPAADSGKVFVCKTCNREFSSFQA 60
           MKRER EGEFE+LDMVDCLMLLSK+EEP RKN    +PAADS KVFVCKTCNREFSSFQA
Sbjct: 1   MKREREEGEFEVLDMVDCLMLLSKMEEPRRKNGFAPTPAADSDKVFVCKTCNREFSSFQA 60

Query: 61  LGGHRASHKKPNFKDANGPPTKPKAHECPICGLDFPIGQALGGHMRRHRTTAAAATVEKS 120
           LGGHR SH KPNF +ANGPPTK KAHECPICGLDFPIGQALGGHMRRHR TAAAA ++KS
Sbjct: 61  LGGHRTSHTKPNF-NANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRDTAAAAVLKKS 120

Query: 121 DGYGKKGFGLDLNLTPVENNLKLQL 142
           DG GK+ F LDLNL P+ENNL L+L
Sbjct: 121 DGCGKRVFELDLNLPPLENNLNLKL 144

[Close]

BLAST of Clc03G02100 vs. ExPASy TrEMBL
Match: A0A6J1GAS1 (zinc finger protein ZAT12-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452472 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 9.5e-59
Identity = 117/145 (80.69%), Postives = 127/145 (87.59%), Query Frame = 0


Query: 1   MKRERE-GEFEILDMVDCLMLLSKVEEPWRKNN---SPAADSGKVFVCKTCNREFSSFQA 60
           MKRERE GEFE+LDMVDCLMLLSK+EEP RKN    +PAADS K+FVCKTCNREFSSFQA
Sbjct: 1   MKREREGGEFEVLDMVDCLMLLSKMEEPRRKNGFAPTPAADSDKIFVCKTCNREFSSFQA 60

Query: 61  LGGHRASHKKPNFKDANGPPTKPKAHECPICGLDFPIGQALGGHMRRHRTTAAAATVEKS 120
           LGGHR SH KPNF +ANGPPTK KAHECPICGLDFPIGQALGGHMRRHR TAAAA ++KS
Sbjct: 61  LGGHRTSHTKPNF-NANGPPTKSKAHECPICGLDFPIGQALGGHMRRHRNTAAAAVLKKS 120

Query: 121 DGYGKKGFGLDLNLTPVENNLKLQL 142
           DG GK+ F LDLNL P+ENNL L+L
Sbjct: 121 DGCGKRVFELDLNLPPLENNLNLKL 144

[Close]

BLAST of Clc03G02100 vs. ExPASy TrEMBL
Match: A0A6J1DVW1 (zinc finger protein ZAT12-like OS=Momordica charantia OX=3673 GN=LOC111024865 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 8.0e-50
Identity = 112/175 (64.00%), Postives = 124/175 (70.86%), Query Frame = 0


Query: 1   MKRER-EGEFEILDMVDCLMLLSKV----------EEPWRKNNSPAA---DSGKVFVCKT 60
           MKRER EGE E+ DMVD LMLLS+V          EEP RKN+SPAA    +GKV +CKT
Sbjct: 1   MKREREEGELEVFDMVDSLMLLSRVGEYNNDQQRPEEPQRKNSSPAAADSGNGKVLICKT 60

Query: 61  CNREFSSFQALGGHRASHKKPNFKDANG---------PPTKPKAHECPICGLDFPIGQAL 120
           C REF SFQALGGHRASH K  F D N          PP K   H+CP+CGL FPIGQAL
Sbjct: 61  CKREFKSFQALGGHRASHGKAKFMDVNSAEVFNPLRPPPAKSGTHQCPVCGLQFPIGQAL 120

Query: 121 GGHMRRHRTTAAAATV-EKSDGYGKKGFGLDLNLTPVE-NNLKLQLTTPFVDCFN 151
           GGHMRRHR+TAAAA V +KSDG   + FG+DLNL PV+ NNLKLQL TPFVDCFN
Sbjct: 121 GGHMRRHRSTAAAAAVLKKSDGREVRVFGVDLNLAPVDNNNLKLQLMTPFVDCFN 175

[Close]

BLAST of Clc03G02100 vs. TAIR 10
Match: AT2G28710.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 132.5 bits (332), Expect = 2.8e-31
Identity = 76/159 (47.80%), Postives = 98/159 (61.64%), Query Frame = 0


Query: 1   MKREREGEFEILDMVDCLMLLSKVEEPWRKNNSPAADSGKVFVCKTCNREFSSFQALGGH 60
           M+R R     I +M +CL+LLSK  +   K+        +VF CKTCN+EF SFQALGGH
Sbjct: 1   MERGRSDMEMINNMANCLILLSKAHQNDTKS--------RVFACKTCNKEFPSFQALGGH 60

Query: 61  RASHKKPNFKDANGPPT----KPKAHECPICGLDFPIGQALGGHMRRHR----------- 120
           RASH++    + + PP+    KP  HECPICG +F +GQALGGHMR+HR           
Sbjct: 61  RASHRRSAALEGHAPPSPKRVKPVKHECPICGAEFAVGQALGGHMRKHRGGSGGGGGRSL 120

Query: 121 -TTAAAATVEKS-DGYGKKGFGLDLNLTPVEN-NLKLQL 142
               A  T++KS  G GK+   LDLNLTP+EN +LKL+L
Sbjct: 121 APATAPVTMKKSGGGNGKRVLCLDLNLTPLENEDLKLEL 151

[Close]

BLAST of Clc03G02100 vs. TAIR 10
Match: AT5G59820.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 122.9 bits (307), Expect = 2.2e-28
Identity = 70/145 (48.28%), Postives = 85/145 (58.62%), Query Frame = 0


Query: 16  DCLMLLSKVEEPWRKNNSPAADSGKVFVCKTCNREFSSFQALGGHRASHKKPN---FKDA 75
           +CLMLLS+V +     N    D  +VF CKTC ++F SFQALGGHRASHKKPN       
Sbjct: 17  NCLMLLSRVGQ----ENVDGGDQKRVFTCKTCLKQFHSFQALGGHRASHKKPNNDALSSG 76

Query: 76  NGPPTKPKAHECPICGLDFPIGQALGGHMRRHRTTAAAA---------------TVEKSD 135
                K  +H CPICG++FP+GQALGGHMRRHR  + AA               T  K  
Sbjct: 77  LMKKVKTSSHPCPICGVEFPMGQALGGHMRRHRNESGAAGGALVTRALLPEPTVTTLKKS 136

Query: 136 GYGKKGFGLDLNLTPVEN-NLKLQL 142
             GK+   LDL+L  V+N NLKL+L
Sbjct: 137 SSGKRVACLDLSLGMVDNLNLKLEL 157

[Close]

BLAST of Clc03G02100 vs. TAIR 10
Match: AT2G37430.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 113.2 bits (282), Expect = 1.8e-25
Identity = 71/169 (42.01%), Postives = 89/169 (52.66%), Query Frame = 0


Query: 1   MKRER---EGEFEILDMVDCLMLLSKVE--EPWRKNNSPAADSGKVFVCKTCNREFSSFQ 60
           MKRER   E   + +D+  CLM+L++    +    N    + +   F CKTCN+ FSSFQ
Sbjct: 1   MKRERSDFEESLKNIDIAKCLMILAQTSMVKQIGLNQHTESHTSNQFECKTCNKRFSSFQ 60

Query: 61  ALGGHRASHKKPNF----KDANGPPTKPKA---HECPICGLDFPIGQALGGHMRRHRTTA 120
           ALGGHRASHKKP      KD        K    H+C IC   F  GQALGGHMRRHR++ 
Sbjct: 61  ALGGHRASHKKPKLTVEQKDVKHLSNDYKGNHFHKCSICSQSFGTGQALGGHMRRHRSSM 120

Query: 121 A-----------AATVEKSDGYGKKGFGLDLNLTPVENNLKLQLTTPFV 147
                       +  V K  G  K+   LDLNLTP+EN+L+      FV
Sbjct: 121 TVEPSFISPMIPSMPVLKRCGSSKRILSLDLNLTPLENDLEYIFGKTFV 169

[Close]

BLAST of Clc03G02100 vs. TAIR 10
Match: AT3G46070.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 109.4 bits (272), Expect = 2.6e-24
Identity = 68/155 (43.87%), Postives = 81/155 (52.26%), Query Frame = 0


Query: 17  CLMLLSKV-EEPWRKNNSPAADSGKVFVCKTCNREFSSFQALGGHRASHKKPNFKDANGP 76
           CLMLLS + E   RK         +VF CKTC R+F SFQALGGHRASH K    D    
Sbjct: 18  CLMLLSGIGEHDGRKK--------RVFRCKTCERDFDSFQALGGHRASHSKLTNSDDKSL 77

Query: 77  PTKPK----------AHECPICGLDFPIGQALGGHMRRHRT------------------- 136
           P  PK          AH CPICGL+FP+GQALGGHMR+HR                    
Sbjct: 78  PGSPKKKPKTTTTTTAHTCPICGLEFPMGQALGGHMRKHRNEKEREKASNVLVTHSFMPE 137

Query: 137 TAAAATVEKSDGYGKKGFGLDLNLTPVENNLKLQL 142
           T    T++KS   GK+   LD +LT VE+ +  +L
Sbjct: 138 TTTVTTLKKSSS-GKRVACLDFDLTSVESFVNTEL 163

[Close]

BLAST of Clc03G02100 vs. TAIR 10
Match: AT3G46080.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 105.5 bits (262), Expect = 3.7e-23
Identity = 70/162 (43.21%), Postives = 85/162 (52.47%), Query Frame = 0


Query: 5   REGEFEILD--MVDCLMLLSKVEEPWRKNNSPAADSGKVFVCKTCNREFSSFQALGGHRA 64
           R  E EI++     CLMLLS+V E             +VF CKTC +EFSSFQALGGHRA
Sbjct: 4   RSEEVEIVEDTAAKCLMLLSRVGE------CGGGGEKRVFRCKTCLKEFSSFQALGGHRA 63

Query: 65  SHKK-PNFKD-------ANGPPTKPKAHECPICGLDFPIGQALGGHMRRHRTTAAA---- 124
           SHKK  N  D       +N       +H CPICG++FP+GQALGGHMRRHR+  A+    
Sbjct: 64  SHKKLINSSDPSLLGSLSNKKTKTATSHPCPICGVEFPMGQALGGHMRRHRSEKASPGTL 123

Query: 125 -----------ATVEKSDGYGKKGFGLDLNLTPVENNLKLQL 142
                       T  K    GK+   LDL+      N KL+L
Sbjct: 124 VTRSFLPETTTVTTLKKSSSGKRVACLDLDSMESLVNWKLEL 159

The following BLAST results are available for this feature:

BLAST of Clc03G02100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895358.1	8.7e-75	90.73	zinc finger protein ZAT12-like [Benincasa hispida]	[more]
XP_008457541.1	2.2e-70	86.75	PREDICTED: zinc finger protein ZAT12-like [Cucumis melo]	[more]
KGN66032.2	8.2e-65	82.31	hypothetical protein Csa_019777 [Cucumis sativus]	[more]
XP_022949001.1	2.0e-58	80.69	zinc finger protein ZAT12-like isoform X1 [Cucurbita moschata]	[more]
XP_022997819.1	2.0e-58	81.38	zinc finger protein ZAT12-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Clc03G02100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q42410	3.2e-27	48.28	Zinc finger protein ZAT12 OS=Arabidopsis thaliana OX=3702 GN=ZAT12 PE=2 SV=1	[more]
Q9SLD4	2.5e-24	42.01	Zinc finger protein ZAT11 OS=Arabidopsis thaliana OX=3702 GN=ZAT11 PE=2 SV=1	[more]
Q9LX85	5.2e-22	43.21	Zinc finger protein ZAT8 OS=Arabidopsis thaliana OX=3702 GN=ZAT8 PE=2 SV=1	[more]
Q9LFG0	8.9e-22	40.88	Zinc finger protein ZAT18 OS=Arabidopsis thaliana OX=3702 GN=ZAT18 PE=2 SV=1	[more]
Q42453	1.2e-21	44.22	Zinc finger protein ZAT7 OS=Arabidopsis thaliana OX=3702 GN=ZAT7 PE=2 SV=1	[more]

BLAST of Clc03G02100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C722	1.1e-70	86.75	zinc finger protein ZAT12-like OS=Cucumis melo OX=3656 GN=LOC103497207 PE=4 SV=1	[more]
A0A0A0LUQ6	1.2e-66	82.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G481720 PE=4 SV=1	[more]
A0A6J1KCM4	9.5e-59	81.38	zinc finger protein ZAT12-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1GAS1	9.5e-59	80.69	zinc finger protein ZAT12-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1DVW1	8.0e-50	64.00	zinc finger protein ZAT12-like OS=Momordica charantia OX=3673 GN=LOC111024865 PE...	[more]

BLAST of Clc03G02100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28710.1	2.8e-31	47.80	C2H2-type zinc finger family protein	[more]
AT5G59820.1	2.2e-28	48.28	C2H2-type zinc finger family protein	[more]
AT2G37430.1	1.8e-25	42.01	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G46070.1	2.6e-24	43.87	C2H2-type zinc finger family protein	[more]
AT3G46080.1	3.7e-23	43.21	C2H2-type zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 82..104 e-value: 0.33 score: 20.0 coord: 42..64 e-value: 0.24 score: 20.5
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 44..64
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 84..104
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 82..109 score: 8.517231
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 42..69 score: 9.327772
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 41..66 e-value: 3.4E-12 score: 46.1 coord: 81..105 e-value: 2.8E-9 score: 36.7
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 40..104 e-value: 6.2E-10 score: 41.3
None	No IPR available	PANTHER	PTHR26374:SF352	CYS2-HIS2 ZINC FINGER TRANSCRIPTION FACTOR	coord: 7..142
None	No IPR available	PANTHER	PTHR26374	ZINC FINGER PROTEIN ZAT5	coord: 7..142
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 40..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc03G02100.1	Clc03G02100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005516	calmodulin binding