Clc03G01560 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc03G01560
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	RHOMBOID-like protein
Location	ClcChr03: 1316919 .. 1326378 (-)
RNA-Seq Expression	Clc03G01560
Synteny	Clc03G01560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAGGGATAAACCCACCGCCGGCATCGAAATCAAGGTCCATTCCCGTCATGGGGAACCCGAGTTTCAACCGGCGGCCGCCAGATCACGGCCGTCGGGGGACTTCTCCGACCGAATTTGGTCAGTACCGGCCATTTAAGAAGTGGGTTCCATGGCTGGTGCCGGGTGTTTGTGGGTTGCTAATTCCGTTCTGTTTACAATTTCTATGTACGTTAACGATTGCCCCAAGAACTCTGCCTCTTGCGTTGGTAGGTTTTTGGGTAGGTTCTCATTTCAGCCTCTTAAAGAGAATCCCCTTCTTGGCCCTTCTTCTTCAACGTGAGTTTCCTTTTTTGCCATTGTGTTTTTGTTGGTTTAAACTACTGTTTTATTAATGGAGGATTAGTGCTGTTAATGAGTGTGGATTTTCTGCTATATAGCATTTGATATTGTTCATGTTCTTCTGGAGTTTTATTTTATTTTATTTTATTTTATTTTATTTTTATTATTGTTATTTTCTGATTATCTGAAGAGGCATTGTGGTTATGTTATGTTCTATCTAGTGTTAAAACGTGCTGTGAGATGGTTTGAATGTTATTGGAGATGATCATGGCTGCATTGAAGTCTATCTTTGTTGTCAAAATGAAGTGTGTATCAGAAAAAAGTTGTTGTGCTGAAGTTTTGGGTTGGTGTAACAAACTGCACTTATGGGATTTACCCAACAGAAAGGCTTCCTTTGAGAGTGCTAGGTGAAATTTTGTTGACATTTCTGGTGAAGTAATTTAGGATCATGTGGGTGAATTCATCTGCTATATGATTGAGAATTGTAAGAAAAAGTATGCACATTGTAGAAGAAGTTATTGTACCTATGTTTTTCTTTCTCACTTTATTTAATCTCCTAATTTCAGATTAGAAAAGATGGTGCTCTGGAAGTTGATAAAGTGGTTTATGGGCACCATGCCATGGAGATTGATCTCTTGTTTATGGCTACATGCAGGGGTGTTCCATATACTTGCTAACATGCTAAGTCTTGTTTTCATTGGAATAAGGCTCGAGCAAGAGTTCGGATTTGGTACGCATGCCAGTTTGAAATTAATCTTTAAATTCAATTGTTGATTTATTAAGGCACCCATTTCATAACAATTTTGTTTTGGTTTTCTGTTTTTAAAAATTTTGTTTGTTAACTAACATTTTTCTTTGTTTTCCAATCTAATTGTTTTTAATAAAAATAAAAAACCAAAAAAGAAAAAAAAGAAAAAAGTTAATTAAAATCCTAGCTGAATCTTGAAAACTATAAGTAGCTTTATATAAATTTCAAAGACTGTTTTTTTTTATGTTTTTTCAAAACTTAGAGTGAAATGTCTTCAGCAGGCATTGATCTATGCAGTTTCTATAACCTTAGAAAACTGACAATATAATTTTTATCGAGGCCTAAGCTTTTTGTAATGATCCTCAATCAGCTTTTATAACCTTAGCTTGATTTCTTATGGAATTTGATTTTGTATTTGGCAGACATGTTTATACTAACTGCATGTTGTGAATTGATCATGAGTTATTTTTATATCTATATTACAATTAGAGCTATCCTTTTTTTTTCCTGATAACCGCATCATATTCTTATTGTAGAACAGTGATAATTATTTTTCTGTATTCTTATCCATAGTTCGAATTGGAATGCTGTACATTGTATCTGGGTTTGGTGGCAGTTTGATGTCGGCTCTGTTTATCCAGTCGGGTATCTCAGTAGGTGCTTCGGGTGCTCTTTTTGGTCTCTTAGGAGGCATGTTGTCGGAGCTCCTTACGAATTGGACAATATATGCAAATAAGGTAACGGAAGTTCAACATAGAAAAGTCACTTGATTGTCTATGCATTGCCTAGTAACTGACTCAGAATCTGTGATGAAGCTTGCAGCCTTGTTGACTCTCCTCTTCATTATCGTAATCAATTTGGCCGTGGGTGTGCTTCCTCATGTTGATAATTTTGCTCATATTGGAGGATTTATCTCAGGTTTTCTTCTGGGGTTTGTGTTTTTAGTACGTCCTCAGTTTGGGTGGGTTAGCCAACGAAATGCACCTCGTCGAAATAATTCAACTTCAAAGTCTAAATATAAGCCATATCAGTACGTGCTATGGATAGTATCTCTGTTGTTACTAATTGCTGGGTAAGTACTTTTTTTTTTTTTTTTTTTTAAATTTCATATCATTTGAAGTTTTGGGTTTGACTGCTGAATTTGTGTAATTGTTTTCATCAAGTTGATCCCTGCGTTCATATTGAGTCCTCCAATATCTGTGCTAGCATTATCTGCCCGACCATCGACATTACTTTACTGACATTTCGGAATCAACAGGTTTGCAGTTGGTTTGATCTTTCTCTTTAGAGGGGAAAATATGAATGATCGCTGTCATGGTGCCATTATTTGAGCTGCATTCCCACGTCAAAATGGAGCTGCAACTCGCAGAAGTTCTCTTGTGAGGTAACTGACTACTTCTCTTGCTTCAAATCAGTTTCAAATCCTAGTTTGGTGTGACCTTTACAGATCCTTACAGCCCAAACTTTCATGTTCTGCCAGCGATTGTCAAATATCTCTACAATGGTATGATATTATCTACTTTAAAGTTTTGCCAGTGATTGTCCTAAATATCTCTACCATGGTATGATATTATCTACTTTGGGTACAACCCTCATGACTTTTCGCTTCACCCAAGAGGCCTCATGCTATCTGCAATAGTTGTCTTCACTTAAAACTCATGATCATCTTCTTATTTAACCAATGTGGGACTTCAATCGCATTTCAACAATCTTCCCCTCAAACAGAAGACTACCAGCCTCCCCTCAAATAGCATCTTTCTGAATTACACTTAAGCACACTATCTGTTTGAAAGCCCAACCATAAAATAATCATCCCTCCAAATTACACTTGTGCACACCGCCTATCTACAAGCTCAACTATGGATAAGTACCATCTTCCAAGCTCTCCACTTCTTTGTTCGACACTCGAAGGGGGTTTTATCGACATGGCTAAGTCAAGGCATGCTCTGATACCATTTGTAAGGGACAATGGACAATGACCCTCCAAATAACTTCCACAATTGTATGATATTGTCCACCCTAGGCATAACCCTCATGACTTTGTTTATGGTTTCACCCAACGAGCTCATGCCATTAAAGAATAGTCGTTCTTGCTTATAAACCCACGATCATCCTTCATCTAGCAATGTGAGGCTTTGATTGCAGTCCCAACACAATCTAAAGCCAACATCTGATTGGCAAGTCATCTATACAGTAGATTGGAATATGGGATCTCTGTTTGTGAAAATGTAAGTTAGGTATCAAACCTCCTATAATCCTATCTCTTTCTATGCAGTTTGAGGTGATATTTTGTAGCTGAAATATCAGAGATTCAGATCCTATTTCTTACCAAACCTGTTTGGGGACAGGAGACTTTTCAAAATAAGTTTCCGCTTTTGTGTTTAAGAAGATTATGATGGGTGGCTTGTTAGTGGTTAAAGTTACCTGTGTATTTAAACCACTATTTTTCAGAATAAATTCTGTTCTAAGACCCTCACACAACCCCCGAAAAAGAAAGTGAAATCTTGTCATTCTAACATCATAACATTTATGCAGACGAGTCAGTTGGGGAAGGAACAGCTGAATGTGACGAGCTTTAAGCAATGGAAGAAGCGGCTCATATTTGTAACCCAACAGTAGCTCCTTAGAAGCACAACAGATATGTTCTCAGCTCTGCAATTGACTTAGGTTATGATATAAATTTTATACACAGAGAAAAAATGTGGAGACTTGAAGAGCTGTTTCTGTCATTGTTTTATGATCAAAGTGTATATGATAACATTTAATCATGTCTTCATACAACAAACTAGTCTGTGCCAAGCTCAGATTATGGAAATAACCACACAACTTTTCATTCTTATCTCTGAAACCTGAGAGTTCCCTGTATCTTTGTTAGTCCAACTTACTTTGCAAACAAAGTTATATGTTAAACTCACTTATGGGAGAGAATATATGCTGAGACGGAGTTTTTTCATCCTTAAGAATGGCTTTTCTTTCTTATGATTGCCTTTTTGACAAACCTTTTCCCCCCAAAAAACTGTTCCACTCCTATAATCCTTTTTAGCAAATAAGTTGTCTTTTATTGCATATTGTGTGGATTCTATTGCTTAGAAGATGTTGAAATTTGTAGACAAGAGACTACACAATAATGTTACAATGAATTGTCACTATTGTTATATGAGTTTAGCCATAATATTTTTGTGTAAAGTAGTCAATCTAAGTATAGTTTAGTAGATAAAGTATCTATTATTGTAAAAGTTAGCTTAGTAGATAGACATATATTATTGAAACGATGGGTTGGTCGATTTCTCACCCTACAAGTGATGAGAACAAATTTTTTTTTTCAATAGTCTCTCCACACCATGTCTTTCTTTTTCTCCTTCTATCTCGACATGAACACAAGCTTTTAAATCGATACATGTCCCCCTCCCTGTCACTTTCCCTTCTGGTGATCTCATTGTCGAACCCTACTTCCCCTTGATTTTTGGTCACCAATGGAGTAGACTAACAATGGCCATTGTGAGACCTTGAGCATATGCATGGATTTAATAGAGGTAAAAGTACTTGTTGTAGATTATGATTGTGGAGCTTAGGAAGATTCATATGCTCATGTGAAGTGTTGAAAAGGAGTACAAGTGATGTATTTTTTTATATATAATTTTAATATTTTAAATTTGATTAATCAGTTATATAATTTGTCTTTTTATATAATTTTAAATTTTCAAAATTGCACCTAATAATGATGGTTTAAAAATTGTTTTTTTTTTTTTTTTTTCTTTTTTCTTTTAACTTTAACAATTAGAAGTGGGGTGATTGAATTTTAACTTACTACTATGTTCGGATTGGCATTAATCACTTTTCTTTTATTAAATTCCAGATTTAATTTATTCTATTATTTATTATATTTAAGTTGAATTTAATCACCACTACATTAAAATAATAGTTAAAATTTCAAAATGTACTTGCAATTGAGAATGGAGAAAAAAGCGAAGAGATTAAGGACGGTTTGGATTGACTAGAGAAAAAAAAATGTTTTTTAAAAAAACTCATTTTTATTTAAACTATTTGATAAAAATTGTTTAAAATACACTTCAAAATCTATTTTGAGTGGGTATCAACCATTCCAATTTTTTTTCAAAATGAATTTATTTTTTAAATTAAATCCTTAAAATATATTTACAAATTCAATTACTTAAATAAAATAGAGAAAGTAAAGAAAAATTGGGATATAAAGATATTGGTACACAAAAAGCCTACCATCGTTGAGGAGTAAGTAATAATTATGATTTAAAATAGTGGTGTTGATAATAAGTTGTTAAAATGGCAGGAAAAATATTCATTAAAATAAAATTATAAATGGAAATAGAAATAAAAATTAAAACAATACAAAGAGAATCTGATATTCTGGTGTGATATTTGCCACATAGTGCACATGCATTCGAAAAAAAATGAATGAAGTTACTTTCCCTACACTAAAATGACGTTAACCCATCCCCTCCTTAAGCTAATTTTGTCATCTTTTTGCTCTTTCTTACCTTTCATCTTATTCTTTCTCAATTATCCCATTCGTCCTCGAATCATTCACAATCCTTTTAATAATAAAACAATCCTTTCAAGTTTATAAATTAAATTGTTACAGATTTGAGATTACTATAAATTAGAACGTTACCAATTACAAGATTTAAATTGTTGCTTCTATAAAAATTAAGTGCCAAAAGTATTTTTTAACCGGTTCTATTTTGCCAAAATTTTTAAAAAGATATAATAAAAATATTGATTCATCGCCCCTATCATGTCTAACCATGTAAACAAAATATATATATAGCATAGTAATAACAATAACATGAAAATTGAACCATAATATTTATAAATAAAATCGATGTAGTAATCCTTATTTTTGATATTTTAGTATTATTTATAAATATTTTAAAGAGTTTTATCATAAAAAATAATTTTCTTAATAATAAAGAATAAAGAATAAGAATAATAAACCGTCTTTTTCATTCTCCCGCTCGCCAAACCCTCAGTGCCTCGAAGGCCTCCGTAACTTCCTCGCAAATCCTCTTTGCAACTTCTTCCATTCCATCCCAGGTATCAATCTTCTCTCTTCTCTTACCTTTTTCTTTTCTTCATCTTCTTCTCTTTTCTGTTGCTTCCATTTTTCCTTTCATTCCTTTCTGTTCCTCCTCTTCTCAACCCATTTCTCAGAATCTGCAAAACCTCCCCCTATCGTCACCCTTTTCGAGATAGGGCAACTTTCATCTTTTCTTCTAAGGAGGTCTCTCCTCCCTTTAAAACTCGGATACCCACTTTCTTAAAACTTGGATTTTTCTCTGCTCACATTGCCGTCAACAATATAAAAAGCGATCCTTAGTGGGGCCTTTACACCTGCAAAAAGAGATTGGTGCATTCCCCTGATTTTCCTTTTTATTACTTAATGATTCTTGCATGAATGTTCTGTGTATGCTGATTTTTTTTTTTTTATTATTATTATTTTTTTTTAATCTCTATGGAGAACTTGATCTTATAAATACTTGAAACAACGTTTCTAGAGCAATAGCTGTTGGAGATTTCTATTTTTTTATTGTCTTGTTTTTTTCTGGGAGTACAGTTTATTCTCATGATGTTCACTGGAGATAATTAGCATTGGATTTTTTTCCATTGTGCTTAATTAGTTTAAAATATAATTAGCATCTTCTTTTGGTACTTGGTAGACTTGAAACCAAGGAACTTTTAGTGAATGATTATTGAAATTGTGATCTTGTTTCATTTTCAATTGTTAATGGAAGATCTTAAAGGCAGGCGTTGGGAGTGGAAAGGGTTATTTGGGTGCTAATTTTTACGTTAATAGTCAAATATTATGCTGTTCGTTTAATAGTCCATGCCCTTCATGCTATAACCTAACGATAGAAAATGATCAATCGGCATTGATATTTCTTAATAACCAGGTTTTTGTATTTTTCTTTTATTTTTATTTAATTACCTAACAGCTACATTGGGCTGTTCTGAAATAGTCCTATCATGAGATTGTGGTCCTCTACTAGCGTGGGAAATTCTGAAAGACAAATCGAAAAGATATTATATGGTTTTGGAATGATGATAAGAAGTTACTAATATGGGGATGATTAGGATACCTTAAGCCCTTGGGACAACTTTTGTAAGAATGAAAAGTATTTTTACCCCATTGGAAGAATTTTTTCATAATTTTCGAGGTGTGTGTTACTACTTGGTCAAAAGTGTTTTCAAATTTAAAAAATATTTGTGACATTTTTTGAAGTTCTCTTAGAGAAAGCACTTTTCAAGTGCTTCTTCTGAAAGTGCTCATAGAACAACTACTCCACCTAAAAGGCATTCCAGATTCACGCTGTAAGAATATTAGAGATATTATTTGAATATTAGGAGGGCATATTTTTCCAATAGTAGAGAGCTGGTAAGTTAGGAGAATTTATCAACAATTGGGTAGTTATTGGAACTTTAGCAAGGTATACCTTTTTTCACCCTTTTCTTTTTGGAGAACAATAAGGGATAGGGTAGGAATTTGAACCATGGACCTTGAAAGAGTTTATTGGTGCTTCAACTGCTGAGCTATGCTCATGTTGTTGTCGTTTTTTTTTTTTTTTTTTTATATTTTTAATTTTTTTATTCATAACTTTGTAGGAGAAAGTTGATAGAGGACAAGATAAATAGTAAAGACTTAGAGAGAATGAGTTCAAATCATGGTGACACCATACCTCGATTTTAAAATTCTACTAGCTCAACCAAATGTAGCAAGGTCAAATAGTTGTCTCGTGAGAAGAGTCAAGGTGTGTTAGCTCGAATTCTCATGGACGTAGAAGAGTAAGTGTGGAAAATGGTACAACAAGCGCAAAAACCTTAGTTTGTGTAATTTGTTTGATACAAACACTTGTTAGCATTATAGGCATATGTTAGGCACTTGTTGTACAAAGGGAACATGGGTCCAACATTTGCTAACTTAAATTTCCTTCTTGTATAAAAAATGATAAATATATTTCATTAAATGCATTCTTGTTGTGTTTGTGTCATCGATTTTTCTTAAATGACATGTTGTTGTAGTGGTTCGTCTCAAGTACTATCAGATTATAATTTATAGCGTACACAATAAAATTATAGTGATTCATCTTAAGTACTATTAGAAACATCAGTGAAGAAAGTCCTCTAGTTTCAAATCTTCTTTACTTGCTAAATTGTATCAACTATACATATTTGTTGAATCATATGAAAGGCCGTTTTCCATTCTGCTGCTTTTTTCCCCTCTTTAGTCTAATTTTATTTGAGAATGGTAGGATTATGTATAGAAAGTTGGGCGGCAAGTAGCATTATAAGTTCTTATCAAAAAGGAAAAGAAGTAGCATTATAATTAACTAGTAAAGTTCAGAGTTCGTACTGTTAACAGTTTCTAGATTGATTATGAATACTTGAATAGTAACAGATACACAAGGAAATGGATGACTTTTCTACAGGGATGGCTCTTTGGCCGACTGTTTTTCTTGCTACCTTCTGTAATATTTAGCTTGAGAAAAATAAGGGGATGTTTTAAGGACGAGGAGCATTCTTGGGTGGATGTTTGAACCTTGGGTTTTGTGGGGGTGAGAGGAATAATAGGGTGTTTGGGAGAGTGGAGAGGGATACTAGGGAGCTTTGGTCCCTTTTTTGCTATCCTGTTATCTTTTGGGTTTCGATTTTGAAGACTTTTTGTAATTATTCTATTGGCATGATTTTTAATAGTTGGAGTCCCTTCTTGTAATGGGAGCTCCTCGTTTTTTTTGTGGGCTTAGTTTTTGTATGCCTGTGTATTCTTTCATTCTTTCTCAATGAAAGCTGTTATTTTCATTATAAAAATAAAAAAATAATAAAAATAAAAAAAATAAAAATAAATAAAGCCTCCTTTTCAGTCTCCATTACCTAGGAATTCTATGGTGGTCCTATTCTTTATAATCAAAACACTGGAAACAAAATTCTTATCAAATGCACCTTACATAATAAGCCATTAATTAATCTTTCTGCCTTTATTTCCTAGAGAGAGATCAATGATAGCAGGTATTTTTCTTGGATACAATACGGATATTGGACAAGACAGTTGTGCATACATTTAGGAAAACCAAGACACTAACCTAACTCCTACAAGAACATGAAAACAGGGGGCAATGCCAAATTGTTGGAAGAAAAATAAATAGACAGATTGCTTCTGGAATGTGTTACAAGTGGCACTGCTTAATTTCGTTAGAGCCTATGCAAAGTTTTCTTCTCCTTTTTTCTTTTTTTTTAGATAAAGCTTCTCCTCCTGAAGTTAATGAGAACAATACTTGTTTTTCAATTATTCTAGATGTATTTGGGATTAAATGCTAATTGCTACATTTATTTTCTTTTGTCGATATCATTTCCAGGTTAG

mRNA sequence

ATGGCGAGGGATAAACCCACCGCCGGCATCGAAATCAAGGTCCATTCCCGTCATGGGGAACCCGAGTTTCAACCGGCGGCCGCCAGATCACGGCCGTCGGGGGACTTCTCCGACCGAATTTGGTTTTTGGGGGTGTTCCATATACTTGCTAACATGCTAAGTCTTGTTTTCATTGGAATAAGGCTCGAGCAAGAGTTCGGATTTGTTCGAATTGGAATGCTGTACATTGTATCTGGGTTTGGTGGCAGTTTGATGTCGGCTCTGTTTATCCAGTCGGGTATCTCAGTAGGTGCTTCGGGTGCTCTTTTTGGTCTCTTAGGAGGCATGTTGTCGGAGCTCCTTACGAATTGGACAATATATGCAAATAAGCTTGCAGCCTTGTTGACTCTCCTCTTCATTATCGTAATCAATTTGGCCGTGGGTGTGCTTCCTCATGTTGATAATTTTGCTCATATTGGAGGATTTATCTCAGGTTTTCTTCTGGGGTTTGTGTTTTTAGTACGTCCTCAGTTTGGGTGGGTTAGCCAACGAAATGCACCTCGTCGAAATAATTCAACTTCAAAGTCTAAATATAAGCCATATCAGTACGTGCTATGGATAGTATCTCTGTTGTTACTAATTGCTGGGTTTGCAGTTGGTTTGATCTTTCTCTTTAGAGGGGAAAATATGAATGATCGCTGTCATGATCCTTACAGCCCAAACTTTCATGTTCTGCCAGCGATTGTCAAATATCTCTACAATGGCCTCCGTAACTTCCTCGCAAATCCTCTTTGCAACTTCTTCCATTCCATCCCAGGTTAG

Coding sequence (CDS)

ATGGCGAGGGATAAACCCACCGCCGGCATCGAAATCAAGGTCCATTCCCGTCATGGGGAACCCGAGTTTCAACCGGCGGCCGCCAGATCACGGCCGTCGGGGGACTTCTCCGACCGAATTTGGTTTTTGGGGGTGTTCCATATACTTGCTAACATGCTAAGTCTTGTTTTCATTGGAATAAGGCTCGAGCAAGAGTTCGGATTTGTTCGAATTGGAATGCTGTACATTGTATCTGGGTTTGGTGGCAGTTTGATGTCGGCTCTGTTTATCCAGTCGGGTATCTCAGTAGGTGCTTCGGGTGCTCTTTTTGGTCTCTTAGGAGGCATGTTGTCGGAGCTCCTTACGAATTGGACAATATATGCAAATAAGCTTGCAGCCTTGTTGACTCTCCTCTTCATTATCGTAATCAATTTGGCCGTGGGTGTGCTTCCTCATGTTGATAATTTTGCTCATATTGGAGGATTTATCTCAGGTTTTCTTCTGGGGTTTGTGTTTTTAGTACGTCCTCAGTTTGGGTGGGTTAGCCAACGAAATGCACCTCGTCGAAATAATTCAACTTCAAAGTCTAAATATAAGCCATATCAGTACGTGCTATGGATAGTATCTCTGTTGTTACTAATTGCTGGGTTTGCAGTTGGTTTGATCTTTCTCTTTAGAGGGGAAAATATGAATGATCGCTGTCATGATCCTTACAGCCCAAACTTTCATGTTCTGCCAGCGATTGTCAAATATCTCTACAATGGCCTCCGTAACTTCCTCGCAAATCCTCTTTGCAACTTCTTCCATTCCATCCCAGGTTAG

Protein sequence

MARDKPTAGIEIKVHSRHGEPEFQPAAARSRPSGDFSDRIWFLGVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFGGSLMSALFIQSGISVGASGALFGLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDNFAHIGGFISGFLLGFVFLVRPQFGWVSQRNAPRRNNSTSKSKYKPYQYVLWIVSLLLLIAGFAVGLIFLFRGENMNDRCHDPYSPNFHVLPAIVKYLYNGLRNFLANPLCNFFHSIPG

Homology

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BLAST of Clc03G01560 vs. NCBI nr
Match: XP_031736226.1 (RHOMBOID-like protein 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 386.3 bits (991), Expect = 2.1e-103
Identity = 213/283 (75.27%), Postives = 219/283 (77.39%), Query Frame = 0


Query: 1   MARDKPTAGIEIKVHSRHGEPEFQPAAARSRPSGD------------------------- 60
           MARDKPTAGIEIKVHSRHGE E QPAAARSRPSG                          
Sbjct: 1   MARDKPTAGIEIKVHSRHGEHEVQPAAARSRPSGTSPIEFGQYRPFKKFLGRFSFQPLKE 60

Query: 61  -----------------------FSDRIWFL--------GVFHILANMLSLVFIGIRLEQ 120
                                  +  + W L        GVFHILANMLSLVFIGIRLEQ
Sbjct: 61  NPLLGPSSSTLEKMGALEVDKVVYGHQAWRLISCLWLHAGVFHILANMLSLVFIGIRLEQ 120

Query: 121 EFGFVRIGMLYIVSGFGGSLMSALFIQSGISVGASGALFGLLGGMLSELLTNWTIYANKL 180
           EFGFVRIGMLYIVSGFGGSLMSALFIQSGISVGASGALFGLLGGMLSELLTNWTIYANKL
Sbjct: 121 EFGFVRIGMLYIVSGFGGSLMSALFIQSGISVGASGALFGLLGGMLSELLTNWTIYANKL 180

Query: 181 AALLTLLFIIVINLAVGVLPHVDNFAHIGGFISGFLLGFVFLVRPQFGWVSQRNAPRRNN 228
           AALLTLLFIIVINLAVGVLPHVDNFAHIGGFISGFLLGFVFLVRPQFGWVSQRNAPR N+
Sbjct: 181 AALLTLLFIIVINLAVGVLPHVDNFAHIGGFISGFLLGFVFLVRPQFGWVSQRNAPRGNS 240

[Close]

BLAST of Clc03G01560 vs. NCBI nr
Match: XP_038895553.1 (RHOMBOID-like protein 1 [Benincasa hispida])

HSP 1 Score: 374.0 bits (959), Expect = 1.1e-99
Identity = 214/319 (67.08%), Postives = 218/319 (68.34%), Query Frame = 0


Query: 1   MARDKPTAGIEIKVHSRHGEPEFQPAAARSRPSGD------------------------- 60
           MARDKPTAGIEIKVHSRHGEPE QP AARSRPSG                          
Sbjct: 1   MARDKPTAGIEIKVHSRHGEPEVQPVAARSRPSGTSPTEFGQYRPFKKWVPWLVPVFVVA 60

Query: 61  -----------------------------------------------------------F 120
                                                                      +
Sbjct: 61  NSVLFTISMYVNDCPKNSASCVGRFLGRFSFQPLKENPLLGPSSSTLEKMGALEVDKVVY 120

Query: 121 SDRIWFL--------GVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFGGSLMSAL 180
             + W L        GVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFGGSLMSAL
Sbjct: 121 GHQPWRLISCLWLHAGVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFGGSLMSAL 180

Query: 181 FIQSGISVGASGALFGLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDN 228
           FIQSGISVGASGALFGLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDN
Sbjct: 181 FIQSGISVGASGALFGLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDN 240

[Close]

BLAST of Clc03G01560 vs. NCBI nr
Match: XP_004153913.1 (RHOMBOID-like protein 1 isoform X1 [Cucumis sativus] >KGN65729.1 hypothetical protein Csa_020033 [Cucumis sativus])

HSP 1 Score: 372.5 bits (955), Expect = 3.1e-99
Identity = 213/319 (66.77%), Postives = 219/319 (68.65%), Query Frame = 0


Query: 1   MARDKPTAGIEIKVHSRHGEPEFQPAAARSRPSGD------------------------- 60
           MARDKPTAGIEIKVHSRHGE E QPAAARSRPSG                          
Sbjct: 1   MARDKPTAGIEIKVHSRHGEHEVQPAAARSRPSGTSPIEFGQYRPFKKWVPWLVPVFVVA 60

Query: 61  -----------------------------------------------------------F 120
                                                                      +
Sbjct: 61  NSVMFTISMYVNDCPKNSASCIGRFLGRFSFQPLKENPLLGPSSSTLEKMGALEVDKVVY 120

Query: 121 SDRIWFL--------GVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFGGSLMSAL 180
             + W L        GVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFGGSLMSAL
Sbjct: 121 GHQAWRLISCLWLHAGVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFGGSLMSAL 180

Query: 181 FIQSGISVGASGALFGLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDN 228
           FIQSGISVGASGALFGLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDN
Sbjct: 181 FIQSGISVGASGALFGLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDN 240

[Close]

BLAST of Clc03G01560 vs. NCBI nr
Match: XP_008457471.1 (PREDICTED: RHOMBOID-like protein 1 [Cucumis melo] >XP_008457472.1 PREDICTED: RHOMBOID-like protein 1 [Cucumis melo] >KAA0067746.1 RHOMBOID-like protein 1 [Cucumis melo var. makuwa] >TYJ97398.1 RHOMBOID-like protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 369.0 bits (946), Expect = 3.4e-98
Identity = 211/319 (66.14%), Postives = 218/319 (68.34%), Query Frame = 0


Query: 1   MARDKPTAGIEIKVHSRHGEPEFQPAAARSRPSGD------------------------- 60
           MAR+KPTAGIEIKVHSRHGE E QPAAARSRPSG                          
Sbjct: 1   MARNKPTAGIEIKVHSRHGEHEVQPAAARSRPSGTSPTEFGQYRPFKKWVPWLVPVFVVA 60

Query: 61  -----------------------------------------------------------F 120
                                                                      +
Sbjct: 61  NSVMFTISMYVNDCPKNSASCVGRFLGRFSFQPLKENPLLGPSSSTLEKMGALEVDKVVY 120

Query: 121 SDRIWFL--------GVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFGGSLMSAL 180
             + W L        GVFHILANMLSL+FIGIRLEQEFGFVRIGMLYIVSGFGGSLMSAL
Sbjct: 121 GHQPWRLISCLWLHAGVFHILANMLSLIFIGIRLEQEFGFVRIGMLYIVSGFGGSLMSAL 180

Query: 181 FIQSGISVGASGALFGLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDN 228
           FIQSGISVGASGALFGLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDN
Sbjct: 181 FIQSGISVGASGALFGLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDN 240

[Close]

BLAST of Clc03G01560 vs. NCBI nr
Match: XP_022964679.1 (RHOMBOID-like protein 1 [Cucurbita moschata])

HSP 1 Score: 346.3 bits (887), Expect = 2.4e-91
Identity = 202/321 (62.93%), Postives = 212/321 (66.04%), Query Frame = 0


Query: 1   MARDKPTAGIEIKVHSRHGEPEFQP--AAARSRPS------------------------- 60
           MARDKP A IEIKVHSRHG+P  +P  AAARSRPS                         
Sbjct: 1   MARDKPAANIEIKVHSRHGDPAVEPSAAAARSRPSRTPSTGFGQFRPFKKWIPWLVPVFV 60

Query: 61  ------------------------GDFSDRIWF--------------------------- 120
                                   G F  R  F                           
Sbjct: 61  VVNSVLFSITMYVNDCPKNSASCIGTFLGRFSFQPLKENPLLGPSPSTLEKMGALEVDKV 120

Query: 121 ----------------LGVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFGGSLMS 180
                            GVFHILANMLSLV IGIRLEQEFGFVRIGMLYIVSGFGGSL+S
Sbjct: 121 VYGHQPWRLISCLWLHAGVFHILANMLSLVCIGIRLEQEFGFVRIGMLYIVSGFGGSLLS 180

Query: 181 ALFIQSGISVGASGALFGLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHV 228
           ALFIQSGISVGASGALFGLLGGMLSELLTNWTIY NKLAALLTL+FIIVINLAVGVLPHV
Sbjct: 181 ALFIQSGISVGASGALFGLLGGMLSELLTNWTIYENKLAALLTLVFIIVINLAVGVLPHV 240

[Close]

BLAST of Clc03G01560 vs. ExPASy Swiss-Prot
Match: Q0WQX7 (RHOMBOID-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBL1 PE=2 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 3.2e-75
Identity = 144/190 (75.79%), Postives = 167/190 (87.89%), Query Frame = 0


Query: 40  IWF-LGVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFGGSLMSALFIQSGISVGA 99
           IW   GVFH+LANMLSL+FIGIRLEQEFGFVRIG+LY++SGFGGSL+S+LF ++GISVGA
Sbjct: 136 IWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIGLLYMISGFGGSLLSSLFNRAGISVGA 195

Query: 100 SGALFGLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDNFAHIGGFISG 159
           SGALFGLLG MLSELLTNWTIYANK AALLTL+FII INLAVG+LPHVDNFAH+GGF SG
Sbjct: 196 SGALFGLLGAMLSELLTNWTIYANKFAALLTLIFIIAINLAVGILPHVDNFAHLGGFTSG 255

Query: 160 FLLGFVFLVRPQFGWVSQRNAPRRNNSTS-KSKYKPYQYVLWIVSLLLLIAGFAVGLIFL 219
           FLLGFVFL+RPQ+G+ +QRN PR   + S KSK+KPYQYVLWI SL+LLIAG+  GL+ L
Sbjct: 256 FLLGFVFLIRPQYGYFNQRNNPRGYAAPSAKSKHKPYQYVLWITSLVLLIAGYTAGLVVL 315

Query: 220 FRGENMNDRC 228
            RG ++N  C
Sbjct: 316 LRGTDLNKHC 325

[Close]

BLAST of Clc03G01560 vs. ExPASy Swiss-Prot
Match: Q9LYP1 (RHOMBOID-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RBL3 PE=2 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.6e-69
Identity = 130/189 (68.78%), Postives = 163/189 (86.24%), Query Frame = 0


Query: 40  IWF-LGVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFGGSLMSALFIQSGISVGA 99
           IW   GV H+ ANMLSLVFIGIRLEQ+FGFVRIG++Y++SG GGS++S+LFI++ ISVGA
Sbjct: 141 IWLHAGVIHLGANMLSLVFIGIRLEQQFGFVRIGVIYLLSGIGGSVLSSLFIRNSISVGA 200

Query: 100 SGALFGLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDNFAHIGGFISG 159
           SGALFGLLG MLSEL TNWTIY+NK+AALLTLLF+I+INLA+G+LPHVDNFAH+GGF++G
Sbjct: 201 SGALFGLLGSMLSELFTNWTIYSNKIAALLTLLFVILINLAIGILPHVDNFAHVGGFVTG 260

Query: 160 FLLGFVFLVRPQFGWVSQRNAPRRNNSTSKSKYKPYQYVLWIVSLLLLIAGFAVGLIFLF 219
           FLLGF+ L RPQF W+++ + P+   +  + KYK YQY+LW++SL+LLIAGF V L+ LF
Sbjct: 261 FLLGFILLARPQFKWLAREHMPQ--GTPLRYKYKTYQYLLWLLSLVLLIAGFVVALLMLF 320

Query: 220 RGENMNDRC 228
           RGEN ND C
Sbjct: 321 RGENGNDHC 327

[Close]

BLAST of Clc03G01560 vs. ExPASy Swiss-Prot
Match: Q9CAN1 (RHOMBOID-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RBL2 PE=1 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 9.4e-67
Identity = 125/184 (67.93%), Postives = 153/184 (83.15%), Query Frame = 0


Query: 44  GVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFGGSLMSALFIQSGISVGASGALF 103
           G+ H+L NMLSL+FIGIRLEQ+FGF+R+G++Y++SG GGS++S+LF+Q  ISVGASGALF
Sbjct: 122 GIIHLLTNMLSLIFIGIRLEQQFGFIRVGLIYLISGLGGSILSSLFLQESISVGASGALF 181

Query: 104 GLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDNFAHIGGFISGFLLGF 163
           GLLG MLSELLTNWTIYANK AAL+TLLFII INLA+G+LP VDNFAHIGGF++GF LGF
Sbjct: 182 GLLGAMLSELLTNWTIYANKAAALITLLFIIAINLALGMLPRVDNFAHIGGFLTGFCLGF 241

Query: 164 VFLVRPQFGWVSQRNAPRRNNSTSKSKYKPYQYVLWIVSLLLLIAGFAVGLIFLFRGENM 223
           V LVRPQ+GW     A R N S +K KY  YQYVL++VS++LL+ G  V L+ LF+GEN 
Sbjct: 242 VLLVRPQYGW----EASRTNTSRTKRKYSMYQYVLFVVSVVLLVVGLTVALVMLFKGENG 301

Query: 224 NDRC 228
           N  C
Sbjct: 302 NKHC 301

[Close]

BLAST of Clc03G01560 vs. ExPASy Swiss-Prot
Match: F4JBM4 (RHOMBOID-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=RBL4 PE=2 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 3.1e-62
Identity = 114/184 (61.96%), Postives = 150/184 (81.52%), Query Frame = 0


Query: 44  GVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFGGSLMSALFIQSGISVGASGALF 103
           GV H+L NML+L+FIGIR+E+EFGF+RIG+LY++SGFGGS++SALF++S ISVGASGA+F
Sbjct: 151 GVVHLLMNMLTLLFIGIRMEREFGFIRIGLLYLISGFGGSILSALFLRSNISVGASGAVF 210

Query: 104 GLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDNFAHIGGFISGFLLGF 163
           GLLGGMLSE+  NWTIY+NK+  ++TL+ I+ +NL +GVLP VDNFAHIGGF +GFLLGF
Sbjct: 211 GLLGGMLSEIFINWTIYSNKVVTIVTLVLIVAVNLGLGVLPGVDNFAHIGGFATGFLLGF 270

Query: 164 VFLVRPQFGWVSQRNAPRRNNSTSKSKYKPYQYVLWIVSLLLLIAGFAVGLIFLFRGENM 223
           V L+RP +GW++QRN P         ++K YQ +LW +SLL+L+AGF VGLI LF   + 
Sbjct: 271 VLLIRPHYGWINQRNGP----GAKPHRFKIYQGILWTISLLILVAGFIVGLISLFNNVDG 330

Query: 224 NDRC 228
           N+ C
Sbjct: 331 NEHC 330

[Close]

BLAST of Clc03G01560 vs. ExPASy Swiss-Prot
Match: Q8VZ48 (RHOMBOID-like protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBL6 PE=2 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 5.5e-59
Identity = 111/184 (60.33%), Postives = 146/184 (79.35%), Query Frame = 0


Query: 44  GVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFGGSLMSALFIQSGISVGASGALF 103
           G+ H++ NM  ++  GIRLEQ+FGF+RIG++Y++SGFGGS++SALF+Q  ISVGASGAL 
Sbjct: 109 GIIHLVMNMFDVIIFGIRLEQQFGFIRIGLIYLISGFGGSILSALFLQKSISVGASGALL 168

Query: 104 GLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDNFAHIGGFISGFLLGF 163
           GL+G MLSELLTNWTIY +KL ALL+ LFII INLA+G+LP VDNFAHIGG ++GF LGF
Sbjct: 169 GLMGAMLSELLTNWTIYKSKLCALLSFLFIIAINLAIGLLPWVDNFAHIGGLLTGFCLGF 228

Query: 164 VFLVRPQFGWVSQRNAPRRNNSTSKSKYKPYQYVLWIVSLLLLIAGFAVGLIFLFRGENM 223
           + L++PQ GW   RN+  +  + ++SKY P QYVL+ V+ +L++AG  VGL+ LF GEN 
Sbjct: 229 ILLMQPQSGWEEFRNS-SQYGARARSKYNPCQYVLFFVAAVLVVAGLTVGLVMLFDGENG 288

Query: 224 NDRC 228
           N  C
Sbjct: 289 NKHC 291

[Close]

BLAST of Clc03G01560 vs. ExPASy TrEMBL
Match: A0A0A0LXE7 (RHOMBOID-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G523040 PE=3 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 1.5e-99
Identity = 213/319 (66.77%), Postives = 219/319 (68.65%), Query Frame = 0


Query: 1   MARDKPTAGIEIKVHSRHGEPEFQPAAARSRPSGD------------------------- 60
           MARDKPTAGIEIKVHSRHGE E QPAAARSRPSG                          
Sbjct: 1   MARDKPTAGIEIKVHSRHGEHEVQPAAARSRPSGTSPIEFGQYRPFKKWVPWLVPVFVVA 60

Query: 61  -----------------------------------------------------------F 120
                                                                      +
Sbjct: 61  NSVMFTISMYVNDCPKNSASCIGRFLGRFSFQPLKENPLLGPSSSTLEKMGALEVDKVVY 120

Query: 121 SDRIWFL--------GVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFGGSLMSAL 180
             + W L        GVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFGGSLMSAL
Sbjct: 121 GHQAWRLISCLWLHAGVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFGGSLMSAL 180

Query: 181 FIQSGISVGASGALFGLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDN 228
           FIQSGISVGASGALFGLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDN
Sbjct: 181 FIQSGISVGASGALFGLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDN 240

[Close]

BLAST of Clc03G01560 vs. ExPASy TrEMBL
Match: A0A1S3C5Q5 (RHOMBOID-like protein OS=Cucumis melo OX=3656 GN=LOC103497154 PE=3 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.7e-98
Identity = 211/319 (66.14%), Postives = 218/319 (68.34%), Query Frame = 0


Query: 1   MARDKPTAGIEIKVHSRHGEPEFQPAAARSRPSGD------------------------- 60
           MAR+KPTAGIEIKVHSRHGE E QPAAARSRPSG                          
Sbjct: 1   MARNKPTAGIEIKVHSRHGEHEVQPAAARSRPSGTSPTEFGQYRPFKKWVPWLVPVFVVA 60

Query: 61  -----------------------------------------------------------F 120
                                                                      +
Sbjct: 61  NSVMFTISMYVNDCPKNSASCVGRFLGRFSFQPLKENPLLGPSSSTLEKMGALEVDKVVY 120

Query: 121 SDRIWFL--------GVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFGGSLMSAL 180
             + W L        GVFHILANMLSL+FIGIRLEQEFGFVRIGMLYIVSGFGGSLMSAL
Sbjct: 121 GHQPWRLISCLWLHAGVFHILANMLSLIFIGIRLEQEFGFVRIGMLYIVSGFGGSLMSAL 180

Query: 181 FIQSGISVGASGALFGLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDN 228
           FIQSGISVGASGALFGLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDN
Sbjct: 181 FIQSGISVGASGALFGLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDN 240

[Close]

BLAST of Clc03G01560 vs. ExPASy TrEMBL
Match: A0A5D3BGU5 (RHOMBOID-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002170 PE=3 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.7e-98
Identity = 211/319 (66.14%), Postives = 218/319 (68.34%), Query Frame = 0


Query: 1   MARDKPTAGIEIKVHSRHGEPEFQPAAARSRPSGD------------------------- 60
           MAR+KPTAGIEIKVHSRHGE E QPAAARSRPSG                          
Sbjct: 1   MARNKPTAGIEIKVHSRHGEHEVQPAAARSRPSGTSPTEFGQYRPFKKWVPWLVPVFVVA 60

Query: 61  -----------------------------------------------------------F 120
                                                                      +
Sbjct: 61  NSVMFTISMYVNDCPKNSASCVGRFLGRFSFQPLKENPLLGPSSSTLEKMGALEVDKVVY 120

Query: 121 SDRIWFL--------GVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFGGSLMSAL 180
             + W L        GVFHILANMLSL+FIGIRLEQEFGFVRIGMLYIVSGFGGSLMSAL
Sbjct: 121 GHQPWRLISCLWLHAGVFHILANMLSLIFIGIRLEQEFGFVRIGMLYIVSGFGGSLMSAL 180

Query: 181 FIQSGISVGASGALFGLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDN 228
           FIQSGISVGASGALFGLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDN
Sbjct: 181 FIQSGISVGASGALFGLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDN 240

[Close]

BLAST of Clc03G01560 vs. ExPASy TrEMBL
Match: A0A6J1HNY8 (RHOMBOID-like protein OS=Cucurbita moschata OX=3662 GN=LOC111464687 PE=3 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 1.2e-91
Identity = 202/321 (62.93%), Postives = 212/321 (66.04%), Query Frame = 0


Query: 1   MARDKPTAGIEIKVHSRHGEPEFQP--AAARSRPS------------------------- 60
           MARDKP A IEIKVHSRHG+P  +P  AAARSRPS                         
Sbjct: 1   MARDKPAANIEIKVHSRHGDPAVEPSAAAARSRPSRTPSTGFGQFRPFKKWIPWLVPVFV 60

Query: 61  ------------------------GDFSDRIWF--------------------------- 120
                                   G F  R  F                           
Sbjct: 61  VVNSVLFSITMYVNDCPKNSASCIGTFLGRFSFQPLKENPLLGPSPSTLEKMGALEVDKV 120

Query: 121 ----------------LGVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFGGSLMS 180
                            GVFHILANMLSLV IGIRLEQEFGFVRIGMLYIVSGFGGSL+S
Sbjct: 121 VYGHQPWRLISCLWLHAGVFHILANMLSLVCIGIRLEQEFGFVRIGMLYIVSGFGGSLLS 180

Query: 181 ALFIQSGISVGASGALFGLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHV 228
           ALFIQSGISVGASGALFGLLGGMLSELLTNWTIY NKLAALLTL+FIIVINLAVGVLPHV
Sbjct: 181 ALFIQSGISVGASGALFGLLGGMLSELLTNWTIYENKLAALLTLVFIIVINLAVGVLPHV 240

[Close]

BLAST of Clc03G01560 vs. ExPASy TrEMBL
Match: A0A6J1HZE9 (RHOMBOID-like protein OS=Cucurbita maxima OX=3661 GN=LOC111469490 PE=3 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 1.3e-90
Identity = 199/321 (61.99%), Postives = 210/321 (65.42%), Query Frame = 0


Query: 1   MARDKPTAGIEIKVHSRHGEPEFQP--AAARSRPS------------------------- 60
           MARDKP A IEIKVHSRHG+P  +P  AAARSRPS                         
Sbjct: 1   MARDKPAANIEIKVHSRHGDPAVEPSAAAARSRPSRTPSTGFGQFRPFKKWIPWLVPVFV 60

Query: 61  ------------------------GDFSDRIWF--------------------------- 120
                                   G F  R  F                           
Sbjct: 61  VVNSVLFSITMYVNDCPKNSASCIGTFLGRFSFQPFKENPLLGPSPSTLEKMGALEVDKV 120

Query: 121 ----------------LGVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFGGSLMS 180
                            GVFHILANMLSL+ IGIRLEQEFGFVRIGMLYI SGFGGSL+S
Sbjct: 121 VYGHQPWRLISCLWLHAGVFHILANMLSLLCIGIRLEQEFGFVRIGMLYIASGFGGSLLS 180

Query: 181 ALFIQSGISVGASGALFGLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHV 228
           ALFIQSGISVGASGALFGLLGGMLSELLTNWTIY NKLAALLTL+FIIVINLA+GVLPHV
Sbjct: 181 ALFIQSGISVGASGALFGLLGGMLSELLTNWTIYENKLAALLTLVFIIVINLAMGVLPHV 240

[Close]

BLAST of Clc03G01560 vs. TAIR 10
Match: AT2G29050.1 (RHOMBOID-like 1 )

HSP 1 Score: 283.1 bits (723), Expect = 2.3e-76
Identity = 144/190 (75.79%), Postives = 167/190 (87.89%), Query Frame = 0


Query: 40  IWF-LGVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFGGSLMSALFIQSGISVGA 99
           IW   GVFH+LANMLSL+FIGIRLEQEFGFVRIG+LY++SGFGGSL+S+LF ++GISVGA
Sbjct: 136 IWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIGLLYMISGFGGSLLSSLFNRAGISVGA 195

Query: 100 SGALFGLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDNFAHIGGFISG 159
           SGALFGLLG MLSELLTNWTIYANK AALLTL+FII INLAVG+LPHVDNFAH+GGF SG
Sbjct: 196 SGALFGLLGAMLSELLTNWTIYANKFAALLTLIFIIAINLAVGILPHVDNFAHLGGFTSG 255

Query: 160 FLLGFVFLVRPQFGWVSQRNAPRRNNSTS-KSKYKPYQYVLWIVSLLLLIAGFAVGLIFL 219
           FLLGFVFL+RPQ+G+ +QRN PR   + S KSK+KPYQYVLWI SL+LLIAG+  GL+ L
Sbjct: 256 FLLGFVFLIRPQYGYFNQRNNPRGYAAPSAKSKHKPYQYVLWITSLVLLIAGYTAGLVVL 315

Query: 220 FRGENMNDRC 228
            RG ++N  C
Sbjct: 316 LRGTDLNKHC 325

[Close]

BLAST of Clc03G01560 vs. TAIR 10
Match: AT5G07250.1 (RHOMBOID-like protein 3 )

HSP 1 Score: 264.2 bits (674), Expect = 1.1e-70
Identity = 130/189 (68.78%), Postives = 163/189 (86.24%), Query Frame = 0


Query: 40  IWF-LGVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFGGSLMSALFIQSGISVGA 99
           IW   GV H+ ANMLSLVFIGIRLEQ+FGFVRIG++Y++SG GGS++S+LFI++ ISVGA
Sbjct: 141 IWLHAGVIHLGANMLSLVFIGIRLEQQFGFVRIGVIYLLSGIGGSVLSSLFIRNSISVGA 200

Query: 100 SGALFGLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDNFAHIGGFISG 159
           SGALFGLLG MLSEL TNWTIY+NK+AALLTLLF+I+INLA+G+LPHVDNFAH+GGF++G
Sbjct: 201 SGALFGLLGSMLSELFTNWTIYSNKIAALLTLLFVILINLAIGILPHVDNFAHVGGFVTG 260

Query: 160 FLLGFVFLVRPQFGWVSQRNAPRRNNSTSKSKYKPYQYVLWIVSLLLLIAGFAVGLIFLF 219
           FLLGF+ L RPQF W+++ + P+   +  + KYK YQY+LW++SL+LLIAGF V L+ LF
Sbjct: 261 FLLGFILLARPQFKWLAREHMPQ--GTPLRYKYKTYQYLLWLLSLVLLIAGFVVALLMLF 320

Query: 220 RGENMNDRC 228
           RGEN ND C
Sbjct: 321 RGENGNDHC 327

[Close]

BLAST of Clc03G01560 vs. TAIR 10
Match: AT1G63120.1 (RHOMBOID-like 2 )

HSP 1 Score: 255.0 bits (650), Expect = 6.7e-68
Identity = 125/184 (67.93%), Postives = 153/184 (83.15%), Query Frame = 0


Query: 44  GVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFGGSLMSALFIQSGISVGASGALF 103
           G+ H+L NMLSL+FIGIRLEQ+FGF+R+G++Y++SG GGS++S+LF+Q  ISVGASGALF
Sbjct: 122 GIIHLLTNMLSLIFIGIRLEQQFGFIRVGLIYLISGLGGSILSSLFLQESISVGASGALF 181

Query: 104 GLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDNFAHIGGFISGFLLGF 163
           GLLG MLSELLTNWTIYANK AAL+TLLFII INLA+G+LP VDNFAHIGGF++GF LGF
Sbjct: 182 GLLGAMLSELLTNWTIYANKAAALITLLFIIAINLALGMLPRVDNFAHIGGFLTGFCLGF 241

Query: 164 VFLVRPQFGWVSQRNAPRRNNSTSKSKYKPYQYVLWIVSLLLLIAGFAVGLIFLFRGENM 223
           V LVRPQ+GW     A R N S +K KY  YQYVL++VS++LL+ G  V L+ LF+GEN 
Sbjct: 242 VLLVRPQYGW----EASRTNTSRTKRKYSMYQYVLFVVSVVLLVVGLTVALVMLFKGENG 301

Query: 224 NDRC 228
           N  C
Sbjct: 302 NKHC 301

[Close]

BLAST of Clc03G01560 vs. TAIR 10
Match: AT2G29050.2 (RHOMBOID-like 1 )

HSP 1 Score: 250.8 bits (639), Expect = 1.3e-66
Identity = 137/201 (68.16%), Postives = 158/201 (78.61%), Query Frame = 0


Query: 40  IWF-LGVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFGGSLMSALFIQSGISVGA 99
           IW   GVFH+LANMLSL+FIGIRLEQEFGFVRIG+LY++SGFGGSL+S+LF ++GISVGA
Sbjct: 136 IWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIGLLYMISGFGGSLLSSLFNRAGISVGA 195

Query: 100 SGALFGLLGGMLSELLTNWTIYANKL----------------------------AALLTL 159
           SGALFGLLG MLSELLTNWTIYANK+                            AALLTL
Sbjct: 196 SGALFGLLGAMLSELLTNWTIYANKVAKSSLVKQAALSMNDVSIMSLVFLHLQFAALLTL 255

Query: 160 LFIIVINLAVGVLPHVDNFAHIGGFISGFLLGFVFLVRPQFGWVSQRNAPRRNNSTS-KS 211
           +FII INLAVG+LPHVDNFAH+GGF SGFLLGFVFL+RPQ+G+ +QRN PR   + S KS
Sbjct: 256 IFIIAINLAVGILPHVDNFAHLGGFTSGFLLGFVFLIRPQYGYFNQRNNPRGYAAPSAKS 315

[Close]

BLAST of Clc03G01560 vs. TAIR 10
Match: AT3G53780.1 (RHOMBOID-like protein 4 )

HSP 1 Score: 240.0 bits (611), Expect = 2.2e-63
Identity = 114/184 (61.96%), Postives = 150/184 (81.52%), Query Frame = 0


Query: 44  GVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFGGSLMSALFIQSGISVGASGALF 103
           GV H+L NML+L+FIGIR+E+EFGF+RIG+LY++SGFGGS++SALF++S ISVGASGA+F
Sbjct: 27  GVVHLLMNMLTLLFIGIRMEREFGFIRIGLLYLISGFGGSILSALFLRSNISVGASGAVF 86

Query: 104 GLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDNFAHIGGFISGFLLGF 163
           GLLGGMLSE+  NWTIY+NK+  ++TL+ I+ +NL +GVLP VDNFAHIGGF +GFLLGF
Sbjct: 87  GLLGGMLSEIFINWTIYSNKVVTIVTLVLIVAVNLGLGVLPGVDNFAHIGGFATGFLLGF 146

Query: 164 VFLVRPQFGWVSQRNAPRRNNSTSKSKYKPYQYVLWIVSLLLLIAGFAVGLIFLFRGENM 223
           V L+RP +GW++QRN P         ++K YQ +LW +SLL+L+AGF VGLI LF   + 
Sbjct: 147 VLLIRPHYGWINQRNGP----GAKPHRFKIYQGILWTISLLILVAGFIVGLISLFNNVDG 206

Query: 224 NDRC 228
           N+ C
Sbjct: 207 NEHC 206

The following BLAST results are available for this feature:

BLAST of Clc03G01560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031736226.1	2.1e-103	75.27	RHOMBOID-like protein 1 isoform X2 [Cucumis sativus]	[more]
XP_038895553.1	1.1e-99	67.08	RHOMBOID-like protein 1 [Benincasa hispida]	[more]
XP_004153913.1	3.1e-99	66.77	RHOMBOID-like protein 1 isoform X1 [Cucumis sativus] >KGN65729.1 hypothetical pr...	[more]
XP_008457471.1	3.4e-98	66.14	PREDICTED: RHOMBOID-like protein 1 [Cucumis melo] >XP_008457472.1 PREDICTED: RHO...	[more]
XP_022964679.1	2.4e-91	62.93	RHOMBOID-like protein 1 [Cucurbita moschata]	[more]

BLAST of Clc03G01560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WQX7	3.2e-75	75.79	RHOMBOID-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBL1 PE=2 SV=1	[more]
Q9LYP1	1.6e-69	68.78	RHOMBOID-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RBL3 PE=2 SV=1	[more]
Q9CAN1	9.4e-67	67.93	RHOMBOID-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RBL2 PE=1 SV=1	[more]
F4JBM4	3.1e-62	61.96	RHOMBOID-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=RBL4 PE=2 SV=1	[more]
Q8VZ48	5.5e-59	60.33	RHOMBOID-like protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBL6 P...	[more]

BLAST of Clc03G01560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXE7	1.5e-99	66.77	RHOMBOID-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G523040 PE=3 SV=1	[more]
A0A1S3C5Q5	1.7e-98	66.14	RHOMBOID-like protein OS=Cucumis melo OX=3656 GN=LOC103497154 PE=3 SV=1	[more]
A0A5D3BGU5	1.7e-98	66.14	RHOMBOID-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold19...	[more]
A0A6J1HNY8	1.2e-91	62.93	RHOMBOID-like protein OS=Cucurbita moschata OX=3662 GN=LOC111464687 PE=3 SV=1	[more]
A0A6J1HZE9	1.3e-90	61.99	RHOMBOID-like protein OS=Cucurbita maxima OX=3661 GN=LOC111469490 PE=3 SV=1	[more]

BLAST of Clc03G01560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G29050.1	2.3e-76	75.79	RHOMBOID-like 1	[more]
AT5G07250.1	1.1e-70	68.78	RHOMBOID-like protein 3	[more]
AT1G63120.1	6.7e-68	67.93	RHOMBOID-like 2	[more]
AT2G29050.2	1.3e-66	68.16	RHOMBOID-like 1	[more]
AT3G53780.1	2.2e-63	61.96	RHOMBOID-like protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035952	Rhomboid-like superfamily	GENE3D	1.20.1540.10		coord: 41..168 e-value: 8.7E-26 score: 92.7
IPR035952	Rhomboid-like superfamily	SUPERFAMILY	144091	Rhomboid-like	coord: 42..170
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 42..168 e-value: 1.8E-32 score: 112.4
None	No IPR available	PANTHER	PTHR22936:SF77	RHOMBOID-LIKE PROTEIN 1	coord: 40..228
IPR002610	Peptidase S54, rhomboid	PANTHER	PTHR22936	RHOMBOID-RELATED	coord: 40..228

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc03G01560.1	Clc03G01560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004252	serine-type endopeptidase activity