Clc03G00590 (gene) Watermelon (cordophanus) v2

Overview
NameClc03G00590
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionTranscription termination factor MTERF2
LocationClcChr03: 501592 .. 508602 (+)
RNA-Seq ExpressionClc03G00590
SyntenyClc03G00590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGTCTTCCTCATCCTCAGTGCAGGGTTTTACCGAGATTTTACAATGGCAGCTATGGCCTCCTTCTTCTTCCCCATTCCCACCATTAATGGCTGCACTAAATCCTCTCCTCTCATCCCTCTCCACCGCTTCATCCTTCCCCAATCTCTCTCCTTCTTTCCTCTCAACTTTCGCCCCTTCTCTTCCCGCTTTCACTCCTTCCTCGCCTCTTCCCATTTCGTTCCTTTCGCCTCTACTTCCTCCGACGCTCTTCCTTTTTCCGATGGCTCTCCAGAAGAAGACCCACTCCATTCTCTGGCCGAAGCCCGACTCGCCGTTTCCGAGTATCTACAGCGTTTCGGGGTTTCGGAGGACGAATCTGTCTCCATCGCCTCCAATTCCCCTCGTTTCTTGAAGATGCTCGTTGATGGAGTTCGGGAATTGGACGAGACATCCATGTGGATTTCCTGGAGTAAGGAAGGAGAAGAACAGCCGTTGGCTGATGATTTTGGGTTTAAGGAAAAGGTGGCTTTGATGGCAATGGAGAAAGGTGATTGTGGGAAGGTTGCTTTCTTGGAAAGCGTCGGTATGAATCTTTCTTCAGCTATGAATGTTGCTCGCTACCTCTCTGGTGAGATGCTCCCATCTCTCATTTATAAGGTAGGGCACTACTTTTGTTGTTCATTGTTTTAGAATTATTGCTAAATTTTCTTCGAATTAGCAATCTCTTTGTCCCGATATTTCCTATAGAAATACTCACAGTTGATCAATTAGCGGAATGCATGAAATTAGCTTCTGATTCGAACTGTCAGAGTTCTTCTTTACTTGAGTTGATATCTGTTTGCGGTGTAAAAATTGAAGATTGATTAGCTCGACGACGTTGGTTTATTTTTACATTTCCTCTTTAGGTAAAATATATGAAGGAACTCTTCTTTTCTGGCAGCGGTGATGGAAAACTCTTAGGAAAATGTGCTCGTCGAATGATGACGAACTTATCGATTCCTCCTGATGATGACGTGCAACAGACTTTATCCTTTTTTGAAAAGGTCTTGTAACAGTCTCGCCATACGTAGTTTTCAGTTCCAAAGTTTCCAATTTCAAAGTTGGAACTTATTTTTTTTCTTATTTCTGTTTCATTCATTTTTGGATTTTCATATCATGTGTTGTCTTTATTAATATTGTTACAGATTGAAGCCAGGCGTGGAGGCCTAGACATGTTGAGTTCAAATGAAGAATCCTTTCGCCTTTTACTTGAATCATTTCCCCGCATGCTTTTGTTGTCAGTAGAATCCCATGTAAAGCCAATGGTAGAATTTCTTGAAATCATTGACATCCCTAAGGAACGCATGAGGAGTATATTTCTACTGTTTCCACCCGTCATTTTCTTCGATACTGAAGTCCTCAAATCAAGGATACTGGCTTTTGAGGAGGTACTATTGCTTGCATTTACGTACTTATATATACATGCACACACAATCACACAAGGGACATGTATACATCATTAAAGTAATTTGATAATAGGTATGAAGTAGCACACTCTGTTTAGGAGTTTGATGAAAGTTCCTAAAACAAGAAGAAACCCCGATATCCTTGAGAATTGTGAACACCAGAGCAAGGTCACCCTTGCTTGAGTATGAAATTATGACTTTAGGCCAAAGTTCATCTCTTTTATGTACGAAATTATTGCTTGAGTTCTTTTGAAAGACTGAAAATGCCGAAAATTTCTTGAATTATATTACCCCTTACTTTCAAATGGAAGGTGGTTACATTTGTAATCGTCCTTGGCTTGAAAGCTTGACCTCCTCCCCTTTTCTATGTTTTCATTTTTCTCAATAATTCTAGTTTCTTATTGACAAAAGAGTTCACCGTATAGTATGATGTTGTGTTGATATTTTCTCACTACTTTTAGTTTATTGCTATTTAATTATCCTGTAGGTTGGCATAGAAGTGACGGTGGTTGGTAAATTGTTGCTTAAATATCCATGGATTACGGCCAATTGCATCCAAGGCAACCTTAAACAGATTGTTTCTTTCTTTGAATTGGAGAAGGTACACCTTCTGTCTGGCCGTTTTACCTTGCTTGTACTAATTTGATTAATTGCATGTTTAAAACCCTAGGAATTGATATATAATTATGCTCATGAGCGCTATTGGTTGGTATTTTGAATTTTAGCAGCTGCCAGCTGATGTGCTGACCATCCTAAATCTCATATTCTTATTTAAAGAATGACAACGTATCTTTTTGAAGTTGAGTGAAAATGGGCCACATTGAAAATAAAAAAGCAGAGATGGTAGATTGGGCCTAAGTGCAACTTTCCTTGAGAAGGCTTCGATCGAGAATCTGTCCTTTAAAGGTTTTCTTTGGGAAGGAGCTAAAGTGAAAGGGGATACCACTTGGTAAACATTGGACCAACATTGGCATTGGAACTCTATGATAAGAAATTTCTGCCGTCTTGCAAAATGGCTATGGAAATTTTGCTTTGACAAAGAGGATTAATGGTAATTTCACTGCAAGAAAGATGATTGATGGAGAAGAGTTGTGGCTAAATTTTGAACCACCAATCGTGGTTCTTGGCTGGTCACTTCCTTCAAACTTTCTATGGTCTCGAACAGGATTGGAATTGTGGGAAATCACAGTTCTGTAAGCTTTCAGAATGATTTTTGGATTGTTAATGAACCCTTTCCTATGAATATTCTCTCTTTCCAATTGGAAAACCTCTTCTGTCAAAGACATTTGGAATCCCCTGCTCAAAAATGGGACCTCGACTATTGAAGTACTTTTTTGGATGTGTTGTCCAAGATGTGCCTCTATCTCAAATTCGCTCACCCATCTCCGTCAGTTCTGTACAAATGGATACCCCTACCTACAACAACCTTTTATTGAAGGATATTGTGAGCAAGAGTGTCTGAGAGAAACGTTTTTTATCCTCCTAGCTTAGTCGACGCTTTGGTGAAGATTGTCGCACTCAAACGTTTTTGATCTTTGTCCTCCTTTCTTTGCCTCTGTGGTTTAAGCTACCCGATATCTTGTCGTCCTTCATCTTTGTGCTGTCCATCCATATCGTTTTTGTTCTCCTTCCATCTCCGTTTTCCTTTGTTTTCTTTTTTGCTTTCCCAAGACAAAACTCGTACGGGGTGTTTGTTTGAAGGGTTGGGCTTCGATGGGTTAGACATCCTAAACTTAACCTTTGGAGTAAGGGTTTAACCTTTTCCCATGGGGTTTAGGGTTTATGGTTTATCTTTTCTTCTCTCTCTCTCAAAATAAAATTTAATGACTAGAATATTTTTAAATACTCTTCTCTCTCTTCTATGCTTTTTCCTCTTGGGGCTTTTTTTTGACTCAATAGTTTTCTTGATTGTCTCTTGGTGTAAATTATCACCACTTTTTTACAACTATAGTTTCTCTCTGCTTTTTATCCAATTGGAGAATTTTATGTAACTCTTTTGGTTTAGGGTTGAAGCCCTATCTTTTGTAGTTTCATACCATCAAATTGATTGTTCTTGGGCATGTGAAGATATAGTATACCAGATAGTTGTCCCATGAACATAGTACCTATATGAAGTTGAGAGACATGAACTGTGTAATCCAATGTTTTCAGTTTTCAAAATTTAGAATATAAATCATTGAAACAAATGAAGTTTTAGGGCAAATATGGACTTATACCCCTAAAATTTGGGAGTTGTATCTATTAAGTTCCCAAACTAATAGTTGTATCAATTTAAACTCCAAACTTTGATAAAAACCAAAATTTGCTTAATCCATTGTGATTCATATATTTGACAACAAGAAATTGAATTTAGATCACATACCAAACGTGCCTTTGCCTTTTGGTAAATGAGCGTGATTTTGTAGTAGGTGCCCTTTAAGCTATTGAAAAATCAAGTCTGTGCTAATATGACGAATGTGCAGCTTGTATATATGGAAAATCTCGTTTACTAGATGATATTTCATGACAGGTACCAAATGCAAGCATTATCAATGCAATCAGCAGTTGGCCACTGATTTTAGGAAGCTCAACTAGTAAATTGCAATTGATGGTGGACAGGTTTGGTGGGCTAGGTGTCCGAAGCAAGAAGTTGGGTCAGGTGATAGCCACAAGTCCCCAGATATTACTTCAAAAACCTCAAGAATTTCTTCAGGTTGGTACCTAGTATTATCTACCATTCTTTGTTGTATCCTGTATTGCAATCAATGTCAAGACAAATTCATGAATACTTTCAACGTTGTTATAGATGATATGTTCAGATCATAATGCTTCAATATGTACTCATTTACTTCAATATTCTTGTATTTTAGATATAGCATACCAATTGTGTACGTCAATTTATTTCTCATCTGACTGCCATATATAACTTGCTTGTTCTCTTGTTTTATGTTCTTATATTATATTCCAACACTAATTAGAAAATTCTATATCATTGTGAAATATGATGATATTCTCTCTAGGTTTTGAACTTTCAATTATAGGAAAAATTGCTAAAGCTAACCCTCAAATTATGTGGGTTACGAACTTACCATCACATCCTCCAACGTTCAATTTGATTAATCACCTTTATAAGTTTATGAAATTGTTGTAATTAAACTCTTTTTTTGAAAAATGGAAACGATGCTGTGATTTTGTACAAATGACCCAAATTTGATATTGAAAGTATTGTTAGTCCTAAACGATGTTGTAATTAAACTCTTCAATATTGCAAAATGCACTAATTAGCTATGTTTAAGTGTTTTTCCTTAAAGAGATGGTTGCTCAAGGTTGATCTAACAAATTTAATCTTTTAGTTTTTAACATTATAGTTTTCAAACTTTATAGGGTAAAAATATATTAGGTTAAATTTACAAATTTATAGTTTAAGGGTTGATTTTTACCGGCCTTATAGTTCAAAAGTAGATTGTGCATTAAATTCTTGTAAGTAAGGGTGGTAGATCAAATTGAAAATTCGCGTGTGGTTGTAACAACCTCTACAACTTAGTGGTGGCTTTTGCAATTTTGTGGAATTTTTTATTGCTTGGGAGTTTCGGAAGTTTATAATTATGTGTGCAAATACAGGTCATTTCATTTTTGGAAGAGATAGGGTTCGATAAAGAAAGTGTTGGCAGGATAATTACTCGTTGCCCAGAAGTATCTGCAACTAGTGTTGAGAAAACGCTAAAGAGGAAGCTTGAATTTCTCATCAGTATTGGTGTTTCTAAGACTCATCTACCTCGTGCAATTAAAAAATATCCCGAGCTTCTTGTGTCTGACCCTGACAAAACCTTACTCCCGCGGTAATGCTCAGACTTCACTTTTGCGTATGTATGTGTTTTTGATGTGGTTCAATTGGTGGGCATAGCTTCCATGGATGAAGCCATAATTTTTTTGAGAAGGGCAAAAATTATACGCATTTTGAAAATGTGTCTTTATGTTAAAAGTACTTTTAGCATATCTGCTGTGTCAAAACTGAAAATGTCCAGATGTAACATTTGAGTAGGTCGCTAATTGAATCGCCTTGCAATTTAAAATTTCAGTTGCAAATCAAGACTTTTCTCACTTCACTATTTAGAATATAGAAAAAGGAAGAATAATTTATCTACTTGCAAAGAATGTATAATTAATTAGATTATAAATAGAAGTTGAAAAGTTTGTATATAAAATTATTGTGGTTGTAGTTGAAATTGATATGGATCTTCACACTACACTACACTATTCTGTTCTATGATGTGATGGCCCAAATTTTAATAATGATCCAAACATTTTGCAGTATAAGGTACCTGAGGCAGAGAGGGCTCTCAGAGAGGGACATTGCCTTCATGGTTGGTAGATTCTCTCCTCTTCTGGGGTATGGTATAGAGGAGGTATTGAGACCCAAACTAGATTTTCTTGTAAATATAATGGAGAAGCCAATAAAGGAAGTGGTCGACTATCCAAGGTACTTTAGCTATTCGCTGGAAAAGAAGATAATTCCAAGGTTCTGGGTGTTGAAGGCGATGAATGTAGAATGTAGTTTAAAGGATATGTTGGGTAAAAATGATGAGGAGTTTGCTGTTGAGTTCATGGGCTACAAAGGAACGAAACATTTAAGTTCTTCACCCACTTAAGAATTTGTCTTTAGAAATAAAGTTGTGTAAATAATCTTCTATATTTTTAGAATATATTTGTAGATTATATTAAGCCAAATGCCCATGTTTTTATAAGACGGGTTGGGGCGGGTATGAATCATCAACCCATTTGAAGTTGAGGGTGTTAAAGCTTAGCAAGCTTGTAGTTGCCTAAAGTGACAAAGAGGGAACTGTCCCCGGGGGAAAGAGGCATGGAGTTCATTGTTGGATGCCAAGTCACGATGCAATTCAAGCTTAGGTAAATTGTACAAGCAGGATTTCATTTTCCGATTATTATTTGAGATATCATATTGTTTTTGTTGATGAAGTAAATTGTGTAGAAAATCTATCTGACCCTCGCTAAAGAAGCTAGAGTTACATTTCCTATTATGGGGTTGAAACGAGTTTATTAGTAGATGGTTAGATTGAGTTTATTAGCAAGAGAGGGCTTGAGATGATTGATTGCTTCCCTCTACATAAGGTTTTTTAATTCATTAATCGTGTTACAGATTCTTTATATGTTTTTATAATTGCAGTATGATCGACTCCTGATGGGGGACTAGCATTGGCAGGCCAACAATACGAGAAGAAGCTTGTCTATAGTTTTGGGTTTGAACAAAGCAAGTTCGCGAACAGGTTAGATTCATTTGGTTCATTCTAATCCTATTAGCATTGCATTTATTAGCTAAAACTTATGTGTATTTCGTATACGTTTTCACTGTTGCATCAGCGGAGTTCTCAATGTTAATATATAGCTAGGTAGGAGTTAGGACTTGAAAATGGGACTAAAACTTCTTCCTGAAGTGCCTATATGATTTATTTTGTAATCATCATGTCTTCTATTCAAAATTTCAGTCTAGTTGCCTTCTAATTCTAGAAAGCCTACCTTTCCTATCGTTCTATTTTTGGTAATTCCAACCTTATATATATATTTTTGAAGCTTAACAACATATACG

mRNA sequence

TTTGTCTTCCTCATCCTCAGTGCAGGGTTTTACCGAGATTTTACAATGGCAGCTATGGCCTCCTTCTTCTTCCCCATTCCCACCATTAATGGCTGCACTAAATCCTCTCCTCTCATCCCTCTCCACCGCTTCATCCTTCCCCAATCTCTCTCCTTCTTTCCTCTCAACTTTCGCCCCTTCTCTTCCCGCTTTCACTCCTTCCTCGCCTCTTCCCATTTCGTTCCTTTCGCCTCTACTTCCTCCGACGCTCTTCCTTTTTCCGATGGCTCTCCAGAAGAAGACCCACTCCATTCTCTGGCCGAAGCCCGACTCGCCGTTTCCGAGTATCTACAGCGTTTCGGGGTTTCGGAGGACGAATCTGTCTCCATCGCCTCCAATTCCCCTCGTTTCTTGAAGATGCTCGTTGATGGAGTTCGGGAATTGGACGAGACATCCATGTGGATTTCCTGGAGTAAGGAAGGAGAAGAACAGCCGTTGGCTGATGATTTTGGGTTTAAGGAAAAGGTGGCTTTGATGGCAATGGAGAAAGGTGATTGTGGGAAGGTTGCTTTCTTGGAAAGCGTCGGTATGAATCTTTCTTCAGCTATGAATGTTGCTCGCTACCTCTCTGGTGAGATGCTCCCATCTCTCATTTATAAGGTAAAATATATGAAGGAACTCTTCTTTTCTGGCAGCGGTGATGGAAAACTCTTAGGAAAATGTGCTCGTCGAATGATGACGAACTTATCGATTCCTCCTGATGATGACGTGCAACAGACTTTATCCTTTTTTGAAAAGATTGAAGCCAGGCGTGGAGGCCTAGACATGTTGAGTTCAAATGAAGAATCCTTTCGCCTTTTACTTGAATCATTTCCCCGCATGCTTTTGTTGTCAGTAGAATCCCATGTAAAGCCAATGGTAGAATTTCTTGAAATCATTGACATCCCTAAGGAACGCATGAGGAGTATATTTCTACTGTTTCCACCCGTCATTTTCTTCGATACTGAAGTCCTCAAATCAAGGATACTGGCTTTTGAGGAGGTTGGCATAGAAGTGACGGTGGTTGGTAAATTGTTGCTTAAATATCCATGGATTACGGCCAATTGCATCCAAGGCAACCTTAAACAGATTGTTTCTTTCTTTGAATTGGAGAAGGTACCAAATGCAAGCATTATCAATGCAATCAGCAGTTGGCCACTGATTTTAGGAAGCTCAACTAGTAAATTGCAATTGATGGTGGACAGGTTTGGTGGGCTAGGTGTCCGAAGCAAGAAGTTGGGTCAGGTGATAGCCACAAGTCCCCAGATATTACTTCAAAAACCTCAAGAATTTCTTCAGGTCATTTCATTTTTGGAAGAGATAGGGTTCGATAAAGAAAGTGTTGGCAGGATAATTACTCGTTGCCCAGAAGTATCTGCAACTAGTGTTGAGAAAACGCTAAAGAGGAAGCTTGAATTTCTCATCAGTATTGGTGTTTCTAAGACTCATCTACCTCGTGCAATTAAAAAATATCCCGAGCTTCTTGTGTCTGACCCTGACAAAACCTTACTCCCGCGTATAAGGTACCTGAGGCAGAGAGGGCTCTCAGAGAGGGACATTGCCTTCATGGTTGGTAGATTCTCTCCTCTTCTGGGGTATGGTATAGAGGAGGTATTGAGACCCAAACTAGATTTTCTTGTAAATATAATGGAGAAGCCAATAAAGGAAGTGGTCGACTATCCAAGGTACTTTAGCTATTCGCTGGAAAAGAAGATAATTCCAAGGTTCTGGGTGTTGAAGGCGATGAATGTAGAATGTAGTTTAAAGGATATGTTGGGTAAAAATGATGAGGAGTTTGCTGTTGAGTTCATGGGCTACAAAGGAACGAAACATTTAAGTTCTTCACCCACTTAAGAATTTGTCTTTAGAAATAAAGTTGTGTAAATAATCTTCTATATTTTTAGAATATATTTGTAGATTATATTAAGCCAAATGCCCATGTTTTTATAAGACGGGTTGGGGCGGGTATGAATCATCAACCCATTTGAAGTTGAGGGTGTTAAAGCTTAGCAAGCTTGTAGTTGCCTAAAGTGACAAAGAGGGAACTGTCCCCGGGGGAAAGAGGCATGGAGTTCATTGTTGGATGCCAAGTCACGATGCAATTCAAGCTTAGTATGATCGACTCCTGATGGGGGACTAGCATTGGCAGGCCAACAATACGAGAAGAAGCTTGTCTATAGTTTTGGGTTTGAACAAAGCAAGTTCGCGAACAGGTTAGATTCATTTGGTTCATTCTAATCCTATTAGCATTGCATTTATTAGCTAAAACTTATGTGTATTTCGTATACGTTTTCACTGTTGCATCAGCGGAGTTCTCAATGTTAATATATAGCTAGGTAGGAGTTAGGACTTGAAAATGGGACTAAAACTTCTTCCTGAAGTGCCTATATGATTTATTTTGTAATCATCATGTCTTCTATTCAAAATTTCAGTCTAGTTGCCTTCTAATTCTAGAAAGCCTACCTTTCCTATCGTTCTATTTTTGGTAATTCCAACCTTATATATATATTTTTGAAGCTTAACAACATATACG

Coding sequence (CDS)

ATGGCAGCTATGGCCTCCTTCTTCTTCCCCATTCCCACCATTAATGGCTGCACTAAATCCTCTCCTCTCATCCCTCTCCACCGCTTCATCCTTCCCCAATCTCTCTCCTTCTTTCCTCTCAACTTTCGCCCCTTCTCTTCCCGCTTTCACTCCTTCCTCGCCTCTTCCCATTTCGTTCCTTTCGCCTCTACTTCCTCCGACGCTCTTCCTTTTTCCGATGGCTCTCCAGAAGAAGACCCACTCCATTCTCTGGCCGAAGCCCGACTCGCCGTTTCCGAGTATCTACAGCGTTTCGGGGTTTCGGAGGACGAATCTGTCTCCATCGCCTCCAATTCCCCTCGTTTCTTGAAGATGCTCGTTGATGGAGTTCGGGAATTGGACGAGACATCCATGTGGATTTCCTGGAGTAAGGAAGGAGAAGAACAGCCGTTGGCTGATGATTTTGGGTTTAAGGAAAAGGTGGCTTTGATGGCAATGGAGAAAGGTGATTGTGGGAAGGTTGCTTTCTTGGAAAGCGTCGGTATGAATCTTTCTTCAGCTATGAATGTTGCTCGCTACCTCTCTGGTGAGATGCTCCCATCTCTCATTTATAAGGTAAAATATATGAAGGAACTCTTCTTTTCTGGCAGCGGTGATGGAAAACTCTTAGGAAAATGTGCTCGTCGAATGATGACGAACTTATCGATTCCTCCTGATGATGACGTGCAACAGACTTTATCCTTTTTTGAAAAGATTGAAGCCAGGCGTGGAGGCCTAGACATGTTGAGTTCAAATGAAGAATCCTTTCGCCTTTTACTTGAATCATTTCCCCGCATGCTTTTGTTGTCAGTAGAATCCCATGTAAAGCCAATGGTAGAATTTCTTGAAATCATTGACATCCCTAAGGAACGCATGAGGAGTATATTTCTACTGTTTCCACCCGTCATTTTCTTCGATACTGAAGTCCTCAAATCAAGGATACTGGCTTTTGAGGAGGTTGGCATAGAAGTGACGGTGGTTGGTAAATTGTTGCTTAAATATCCATGGATTACGGCCAATTGCATCCAAGGCAACCTTAAACAGATTGTTTCTTTCTTTGAATTGGAGAAGGTACCAAATGCAAGCATTATCAATGCAATCAGCAGTTGGCCACTGATTTTAGGAAGCTCAACTAGTAAATTGCAATTGATGGTGGACAGGTTTGGTGGGCTAGGTGTCCGAAGCAAGAAGTTGGGTCAGGTGATAGCCACAAGTCCCCAGATATTACTTCAAAAACCTCAAGAATTTCTTCAGGTCATTTCATTTTTGGAAGAGATAGGGTTCGATAAAGAAAGTGTTGGCAGGATAATTACTCGTTGCCCAGAAGTATCTGCAACTAGTGTTGAGAAAACGCTAAAGAGGAAGCTTGAATTTCTCATCAGTATTGGTGTTTCTAAGACTCATCTACCTCGTGCAATTAAAAAATATCCCGAGCTTCTTGTGTCTGACCCTGACAAAACCTTACTCCCGCGTATAAGGTACCTGAGGCAGAGAGGGCTCTCAGAGAGGGACATTGCCTTCATGGTTGGTAGATTCTCTCCTCTTCTGGGGTATGGTATAGAGGAGGTATTGAGACCCAAACTAGATTTTCTTGTAAATATAATGGAGAAGCCAATAAAGGAAGTGGTCGACTATCCAAGGTACTTTAGCTATTCGCTGGAAAAGAAGATAATTCCAAGGTTCTGGGTGTTGAAGGCGATGAATGTAGAATGTAGTTTAAAGGATATGTTGGGTAAAAATGATGAGGAGTTTGCTGTTGAGTTCATGGGCTACAAAGGAACGAAACATTTAAGTTCTTCACCCACTTAA

Protein sequence

MAAMASFFFPIPTINGCTKSSPLIPLHRFILPQSLSFFPLNFRPFSSRFHSFLASSHFVPFASTSSDALPFSDGSPEEDPLHSLAEARLAVSEYLQRFGVSEDESVSIASNSPRFLKMLVDGVRELDETSMWISWSKEGEEQPLADDFGFKEKVALMAMEKGDCGKVAFLESVGMNLSSAMNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKLLGKCARRMMTNLSIPPDDDVQQTLSFFEKIEARRGGLDMLSSNEESFRLLLESFPRMLLLSVESHVKPMVEFLEIIDIPKERMRSIFLLFPPVIFFDTEVLKSRILAFEEVGIEVTVVGKLLLKYPWITANCIQGNLKQIVSFFELEKVPNASIINAISSWPLILGSSTSKLQLMVDRFGGLGVRSKKLGQVIATSPQILLQKPQEFLQVISFLEEIGFDKESVGRIITRCPEVSATSVEKTLKRKLEFLISIGVSKTHLPRAIKKYPELLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYGIEEVLRPKLDFLVNIMEKPIKEVVDYPRYFSYSLEKKIIPRFWVLKAMNVECSLKDMLGKNDEEFAVEFMGYKGTKHLSSSPT
Homology
[Close]
BLAST of Clc03G00590 vs. NCBI nr
Match: XP_038895303.1 (transcription termination factor MTERF4, chloroplastic [Benincasa hispida] >XP_038895304.1 transcription termination factor MTERF4, chloroplastic [Benincasa hispida] >XP_038895305.1 transcription termination factor MTERF4, chloroplastic [Benincasa hispida])

HSP 1 Score: 1069.7 bits (2765), Expect = 9.3e-309
Identity = 548/602 (91.03%), Postives = 568/602 (94.35%), Query Frame = 0 

Query: 1   MAAMASFFFPIPTINGCTKSSPLIPLHRFILPQSLSFFPLNFRPFSSRFHSFLASSHFVP 60
           MA MASFFFPIPTINGCTKSSPL+PLHRF LPQ  SFFPL F PF SRF   L SSHFV 
Sbjct: 1   MATMASFFFPIPTINGCTKSSPLVPLHRFNLPQPPSFFPLTFCPFPSRFPFLLTSSHFVR 60

Query: 61  FASTSSDALPFSDGSPEEDPLHSLAEARLAVSEYLQRFGVSEDESVSIASNSPRFLKMLV 120
           FASTSSDALPFSDG PEEDPLHSLAEARLAVSEYLQRFGVSEDESVSIASNSPRFLKMLV
Sbjct: 61  FASTSSDALPFSDGPPEEDPLHSLAEARLAVSEYLQRFGVSEDESVSIASNSPRFLKMLV 120

Query: 121 DGVRELDETSMWISWSKEGEEQPLADDFGFKEKVALMAMEKGDCGKVAFLESVGMNLSSA 180
           DGVRELDETSMW+SWSKEG EQPL DDFGFKEKV LMAMEKGD GKVAFLESVGMNLSSA
Sbjct: 121 DGVRELDETSMWVSWSKEGGEQPLVDDFGFKEKVGLMAMEKGDHGKVAFLESVGMNLSSA 180

Query: 181 MNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKLLGKCARRMMTNLSIPPDDDVQQTLS 240
           MNVARYLSGEMLPSLIYKVKYMK LFFSGSGDG+++GK ARRMMTNLSIPPDDDVQQTLS
Sbjct: 181 MNVARYLSGEMLPSLIYKVKYMKGLFFSGSGDGEVIGKNARRMMTNLSIPPDDDVQQTLS 240

Query: 241 FFEKIEARRGGLDMLSSNEESFRLLLESFPRMLLLSVESHVKPMVEFLEIIDIPKERMRS 300
           FFEKIEARRGGLDML SNEESFRLLLESFP ML LSVESHVKP+VEFLE I IPKER RS
Sbjct: 241 FFEKIEARRGGLDMLCSNEESFRLLLESFPHMLFLSVESHVKPVVEFLENIGIPKERTRS 300

Query: 301 IFLLFPPVIFFDTEVLKSRILAFEEVGIEVTVVGKLLLKYPWITANCIQGNLKQIVSFFE 360
           +FLLFPP+IFFDTEVLKSRILAFEEVGIE T VGKLLLKYPWITANCIQGNLKQIVSF E
Sbjct: 301 MFLLFPPIIFFDTEVLKSRILAFEEVGIEATTVGKLLLKYPWITANCIQGNLKQIVSFLE 360

Query: 361 LEKVPNASIINAISSWPLILGSSTSKLQLMVDRFGGLGVRSKKLGQVIATSPQILLQKPQ 420
           LEKVPNASIINAISSWPLILGSSTSKLQLMVDRFGGLGV+SKKLGQVIATSPQILLQKPQ
Sbjct: 361 LEKVPNASIINAISSWPLILGSSTSKLQLMVDRFGGLGVQSKKLGQVIATSPQILLQKPQ 420

Query: 421 EFLQVISFLEEIGFDKESVGRIITRCPEVSATSVEKTLKRKLEFLISIGVSKTHLPRAIK 480
           EFLQV+S+LEE+GFDK SVGRIITRCPE+SATSVEKTLKRK+EFLISIGVSKTHLPRAI+
Sbjct: 421 EFLQVVSYLEELGFDKGSVGRIITRCPEISATSVEKTLKRKIEFLISIGVSKTHLPRAIR 480

Query: 481 KYPELLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYGIEEVLRPKLDFLVNI 540
           KYPELLVSDPDKTLLPRIRYLRQRG SERDIAFMVGRFSP+LGY IEEVLRPKLDFLVNI
Sbjct: 481 KYPELLVSDPDKTLLPRIRYLRQRGFSERDIAFMVGRFSPVLGYSIEEVLRPKLDFLVNI 540

Query: 541 MEKPIKEVVDYPRYFSYSLEKKIIPRFWVLKAMNVECSLKDMLGKNDEEFAVEFMGYKGT 600
           MEK IKEVVDYPRYFSYSLEKKI+PRF VLK +NVECSLKDMLGKNDEEFAV+FMGYKGT
Sbjct: 541 MEKSIKEVVDYPRYFSYSLEKKIVPRFRVLKGINVECSLKDMLGKNDEEFAVQFMGYKGT 600

Query: 601 KH 603
           +H
Sbjct: 601 EH 602

[Close]
BLAST of Clc03G00590 vs. NCBI nr
Match: XP_008457343.1 (PREDICTED: transcription termination factor MTERF2, chloroplastic [Cucumis melo])

HSP 1 Score: 1036.9 bits (2680), Expect = 6.7e-299
Identity = 542/610 (88.85%), Postives = 561/610 (91.97%), Query Frame = 0 

Query: 1   MAAMASF--FFPIPTINGCTKSSPLIPLHRFILPQSLSFFPLNFRPFSSRFHSFLASSHF 60
           MA MASF  FFPIPTIN CTKSSPLIPLHRFILPQS     LNF PF SRFHS L SSHF
Sbjct: 1   MATMASFFLFFPIPTINACTKSSPLIPLHRFILPQS-----LNFCPFPSRFHSLLTSSHF 60

Query: 61  VPFASTSSDALPFSDGSPEEDPLHSLAEARLAVSEYLQRFGVSEDESVSIASNSPRFLKM 120
           +P AS S DALPFSD +PEEDPL SLAEA+LAVSEYLQRFGVSEDESVSIASNSPRFLKM
Sbjct: 61  LPLASISHDALPFSDDTPEEDPLQSLAEAQLAVSEYLQRFGVSEDESVSIASNSPRFLKM 120

Query: 121 LVDGVRELDETSMWISWSKEGEEQPLADDFGFKEKVALMAMEKGDCGKVAFLESVGMNLS 180
           LVD VRELDETSMW+SWSKE  E    D FGFKEKVALMAMEKGDCG+VAFLESVGMNLS
Sbjct: 121 LVDAVRELDETSMWVSWSKERGE---LDGFGFKEKVALMAMEKGDCGQVAFLESVGMNLS 180

Query: 181 SAMNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKLLGKCARRMMTNLSIPPDDDVQQT 240
           SAMNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKL+GK ARRMMTNLSIPPDDDVQQT
Sbjct: 181 SAMNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKLIGKNARRMMTNLSIPPDDDVQQT 240

Query: 241 LSFFEKIEARRGGLDMLSSNEESFRLLLESFPRMLLLSVESHVKPMVEFLEIIDIPKERM 300
           LSFFEKIEARRGGLDMLSS+EESFRLLLESFPRMLLLSVESHVKPMVEFLE I IPKERM
Sbjct: 241 LSFFEKIEARRGGLDMLSSSEESFRLLLESFPRMLLLSVESHVKPMVEFLEKISIPKERM 300

Query: 301 RSIFLLFPPVIFFDTEVLKSRILAFEEVGIEVTVVGKLLLKYPWITANCIQGNLKQIVSF 360
           RSIFLLFPPVIFFDTEVLKSRI+AFEEVG+EVTVVGKLL+KYPWI +NCI GNLKQI+SF
Sbjct: 301 RSIFLLFPPVIFFDTEVLKSRIMAFEEVGVEVTVVGKLLIKYPWIMSNCIDGNLKQIISF 360

Query: 361 FELEKVPNASIINAISSWPLILGSSTSKLQLMVDRFGGLGVRSKKLGQVIATSPQILLQK 420
           FELEKVPNASIINAISSWPLILGSSTSKLQLMVDRF GLGVRSKKLGQVIATSPQILL +
Sbjct: 361 FELEKVPNASIINAISSWPLILGSSTSKLQLMVDRFDGLGVRSKKLGQVIATSPQILLLE 420

Query: 421 PQEFLQVISFLEEIGFDKESVGRIITRCPEVSATSVEKTLKRKLEFLISIGVSKTHLPRA 480
           PQEFLQV+SFLEE+GFDKESVGRII RCPE+SATS+EKTLKRKLEFLISIGVSKTHLPRA
Sbjct: 421 PQEFLQVVSFLEEVGFDKESVGRIIARCPEISATSIEKTLKRKLEFLISIGVSKTHLPRA 480

Query: 481 IKKYPELLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYGIEEVLRPKLDFLV 540
           IKKYPELLVSDP KTLLPRIRYLRQRGLSERDIA MVGRFSPLLGY IEEVLRPKLDFLV
Sbjct: 481 IKKYPELLVSDPHKTLLPRIRYLRQRGLSERDIASMVGRFSPLLGYSIEEVLRPKLDFLV 540

Query: 541 NIMEKPIKEVVDYPRYFSYSLEKKIIPRFWVLKAMNVECSLKDMLGKNDEEFAVEFMGYK 600
           NIMEKPIKEVVDYPRYFSYSLE KIIPRF VLK MNVECSLKDMLGKNDEEF+V F+ YK
Sbjct: 541 NIMEKPIKEVVDYPRYFSYSLENKIIPRFLVLKGMNVECSLKDMLGKNDEEFSVAFLNYK 600

Query: 601 GTKHLSSSPT 609
            T      PT
Sbjct: 601 RTAEHLRPPT 602

[Close]
BLAST of Clc03G00590 vs. NCBI nr
Match: XP_004145310.2 (transcription termination factor MTERF2, chloroplastic [Cucumis sativus] >KAE8653288.1 hypothetical protein Csa_023221 [Cucumis sativus])

HSP 1 Score: 987.6 bits (2552), Expect = 4.6e-284
Identity = 522/602 (86.71%), Postives = 541/602 (89.87%), Query Frame = 0 

Query: 1   MAAMASF--FFPIPTINGCTKSSPLIPLHRFILPQSLSFFPLNFRPFSSRFHSFLASSHF 60
           M  MASF  FFP PTI G +KSSPLIPLH  ILPQS     LNF PF SRFHS L SSHF
Sbjct: 1   MPTMASFFLFFPTPTITGSSKSSPLIPLHPSILPQS-----LNFCPFPSRFHSLLTSSHF 60

Query: 61  VPFASTSSDALPFSDGSPEEDPLHSLAEARLAVSEYLQRFGVSEDESVSIASNSPRFLKM 120
           +P AS S DALPFSD  P+EDPLHSLAEA+LAVSEYLQRFGV EDE+VSIASNSPRFLKM
Sbjct: 61  LPLASISPDALPFSDDPPQEDPLHSLAEAQLAVSEYLQRFGVLEDEAVSIASNSPRFLKM 120

Query: 121 LVDGVRELDETSMWISWSKEGEEQPLADDFGFKEKVALMAMEKGDCGKVAFLESVGMNLS 180
           LVD VRELDETSMW SWSKE  E    D FGFKEKVA MAMEKGDCGKVAFLESVGMNLS
Sbjct: 121 LVDAVRELDETSMWDSWSKERGE---LDGFGFKEKVASMAMEKGDCGKVAFLESVGMNLS 180

Query: 181 SAMNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKLLGKCARRMMTNLSIPPDDDVQQT 240
           SAMNVARYLSGEMLPSLIYKVKYMK LFFSGSGDG L+GK ARRMMTNLSIPPDDDVQQT
Sbjct: 181 SAMNVARYLSGEMLPSLIYKVKYMKALFFSGSGDGILIGKNARRMMTNLSIPPDDDVQQT 240

Query: 241 LSFFEKIEARRGGLDMLSSNEESFRLLLESFPRMLLLSVESHVKPMVEFLEIIDIPKERM 300
           LSFFEKIEARRGGLDMLSSNEESF LLLESFPRMLLLSVESHVKPMVEFLE I IPKERM
Sbjct: 241 LSFFEKIEARRGGLDMLSSNEESFGLLLESFPRMLLLSVESHVKPMVEFLEKIGIPKERM 300

Query: 301 RSIFLLFPPVIFFDTEVLKSRILAFEEVGIEVTVVGKLLLKYPWITANCIQGNLKQIVSF 360
           RSIFLLFPPVIFFDTEVLKSRI+AFEEVG+EVTV GKLLLKYPWIT+NCI GNLKQIVSF
Sbjct: 301 RSIFLLFPPVIFFDTEVLKSRIMAFEEVGVEVTVFGKLLLKYPWITSNCIHGNLKQIVSF 360

Query: 361 FELEKVPNASIINAISSWPLILGSSTSKLQLMVDRFGGLGVRSKKLGQVIATSPQILLQK 420
           FE EKVP+ASIINAISSWPLILGSSTSKL+LMVDR  GLGVRSKKLGQVIATSPQILL K
Sbjct: 361 FESEKVPSASIINAISSWPLILGSSTSKLELMVDRLDGLGVRSKKLGQVIATSPQILLLK 420

Query: 421 PQEFLQVISFLEEIGFDKESVGRIITRCPEVSATSVEKTLKRKLEFLISIGVSKTHLPRA 480
           PQEFLQV+SFLEE+GFDKES+GRII RCPE+SATSVEKTLKRKLEFLI IGVSKTHLPRA
Sbjct: 421 PQEFLQVVSFLEEVGFDKESIGRIIARCPEISATSVEKTLKRKLEFLIKIGVSKTHLPRA 480

Query: 481 IKKYPELLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYGIEEVLRPKLDFLV 540
           IKKYPELLVSDP KTL PRI+YLRQRGLSERDIA MV RFSPLLGY IEEVLRPKLDFLV
Sbjct: 481 IKKYPELLVSDPHKTLHPRIKYLRQRGLSERDIASMVVRFSPLLGYSIEEVLRPKLDFLV 540

Query: 541 NIMEKPIKEVVDYPRYFSYSLEKKIIPRFWVLKAMNVECSLKDMLGKNDEEFAVEFMGYK 600
           NIM+KP KEVVDYPRYFSYSLE KIIPRF  LK MNVECSLKDMLGKNDEEF+V F+G K
Sbjct: 541 NIMKKPKKEVVDYPRYFSYSLENKIIPRFRALKGMNVECSLKDMLGKNDEEFSVAFLGNK 594

[Close]
BLAST of Clc03G00590 vs. NCBI nr
Match: KAA0060027.1 (transcription termination factor MTERF2 [Cucumis melo var. makuwa])

HSP 1 Score: 979.9 bits (2532), Expect = 9.7e-282
Identity = 520/610 (85.25%), Postives = 539/610 (88.36%), Query Frame = 0 

Query: 1   MAAMASF--FFPIPTINGCTKSSPLIPLHRFILPQSLSFFPLNFRPFSSRFHSFLASSHF 60
           MA MASF  FFPIPTIN CTKSSPLIPLHRFILPQS     LNF PF SRFHS L SSHF
Sbjct: 1   MATMASFFLFFPIPTINACTKSSPLIPLHRFILPQS-----LNFCPFPSRFHSLLTSSHF 60

Query: 61  VPFASTSSDALPFSDGSPEEDPLHSLAEARLAVSEYLQRFGVSEDESVSIASNSPRFLKM 120
           +P AS S DALPFSD +PEEDPL SLAEA+LAVSEYLQRFGVSEDESVSIASNSPRFLKM
Sbjct: 61  LPLASISHDALPFSDDTPEEDPLQSLAEAQLAVSEYLQRFGVSEDESVSIASNSPRFLKM 120

Query: 121 LVDGVRELDETSMWISWSKEGEEQPLADDFGFKEKVALMAMEKGDCGKVAFLESVGMNLS 180
           LVD VRELDETSMW+SWSKE  E    D FGFKEKVALMAMEKGDCGKVAFLESVGMNLS
Sbjct: 121 LVDAVRELDETSMWVSWSKERGE---LDGFGFKEKVALMAMEKGDCGKVAFLESVGMNLS 180

Query: 181 SAMNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKLLGKCARRMMTNLSIPPDDDVQQT 240
           SAMNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKL+GK ARRMMTNLSIPPDDDVQQT
Sbjct: 181 SAMNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKLIGKNARRMMTNLSIPPDDDVQQT 240

Query: 241 LSFFEKIEARRGGLDMLSSNEESFRLLLESFPRMLLLSVESHVKPMVEFLEIIDIPKERM 300
           LSFFEKIEARRGGLDMLSS+EESFRLLLESFPRMLLLSVESHVKPMVEFLE I IPKERM
Sbjct: 241 LSFFEKIEARRGGLDMLSSSEESFRLLLESFPRMLLLSVESHVKPMVEFLEKISIPKERM 300

Query: 301 RSIFLLFPPVIFFDTEVLKSRILAFEEVGIEVTVVGKLLLKYPWITANCIQGNLKQIVSF 360
           RSIFLLFPPVIFFDTEVL+SRI+AFEEVG+EVTVVGKLL+KYPWI +NCI GNLKQI+SF
Sbjct: 301 RSIFLLFPPVIFFDTEVLRSRIMAFEEVGVEVTVVGKLLIKYPWIMSNCIDGNLKQIISF 360

Query: 361 FELEKVPNASIINAISSWPLILGSSTSKLQLMVDRFGGLGVRSKKLGQVIATSPQILLQK 420
           FELEKVPNASIINAISSWPLILGSSTSKLQLMVDRF GLGVRSKKLGQVIATSPQILL +
Sbjct: 361 FELEKVPNASIINAISSWPLILGSSTSKLQLMVDRFDGLGVRSKKLGQVIATSPQILLLE 420

Query: 421 PQEFLQVISFLEEIGFDKESVGRIITRCPEVSATSVEKTLKRKLEFLISIGVSKTHLPRA 480
           PQEFLQV+SFLEE+GFDKESVGRII RCPE+SATS+EKTLKRKLEFLISIGVSKTHLPRA
Sbjct: 421 PQEFLQVVSFLEEVGFDKESVGRIIARCPEISATSIEKTLKRKLEFLISIGVSKTHLPRA 480

Query: 481 IKKYPELLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYGIEEVLRPKLDFLV 540
           IKKYPELLVSDP KTLLPRIRYLRQRGLSERDIA MVGRFSPLLGY IEEVLRPKLDFLV
Sbjct: 481 IKKYPELLVSDPHKTLLPRIRYLRQRGLSERDIASMVGRFSPLLGYSIEEVLRPKLDFLV 540

Query: 541 NIMEKPIKEVVDYPRYFSYSLEKKIIPRFWVLKAMNVECSLKDMLGKNDEEFAVEFMGYK 600
           NIMEKPIKEVVDYP                         SLKDMLGKNDEEF+V F+ YK
Sbjct: 541 NIMEKPIKEVVDYP-------------------------SLKDMLGKNDEEFSVAFLNYK 577

Query: 601 GTKHLSSSPT 609
            T      PT
Sbjct: 601 RTAEHLRPPT 577

[Close]
BLAST of Clc03G00590 vs. NCBI nr
Match: TYJ97284.1 (transcription termination factor MTERF2 [Cucumis melo var. makuwa])

HSP 1 Score: 948.0 bits (2449), Expect = 4.1e-272
Identity = 520/681 (76.36%), Postives = 539/681 (79.15%), Query Frame = 0 

Query: 1   MAAMASF--FFPIPTINGCTKSSPLIPLHRFILPQSLSFFPLNFRPFSSRFHSFLASSHF 60
           MA MASF  FFPIPTIN CTKSSPLIPLHRFILPQS     LNF PF SRFHS L SSHF
Sbjct: 1   MATMASFFLFFPIPTINACTKSSPLIPLHRFILPQS-----LNFCPFPSRFHSLLTSSHF 60

Query: 61  VPFASTSSDALPFSDGSPEEDPLHSLAEARLAVSEYLQRFGVSEDESVSIASNSPRFLKM 120
           +P AS S DALPFSD +PEEDPL SLAEA+LAVSEYLQRFGVSEDESVSIASNSPRFLKM
Sbjct: 61  LPLASISHDALPFSDDTPEEDPLQSLAEAQLAVSEYLQRFGVSEDESVSIASNSPRFLKM 120

Query: 121 LVDGVRELDETSMWISWSKEGEEQPLADDFGFKEKVALMAMEKGDCGKVAFLESVGMNLS 180
           LVD VRELDETSMW+SWSKE  E    D FGFKEKVALMAMEKGDCG+VAFLESVGMNLS
Sbjct: 121 LVDAVRELDETSMWVSWSKERGE---LDGFGFKEKVALMAMEKGDCGQVAFLESVGMNLS 180

Query: 181 SAMNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKLLGKCARRMMTNLSIPPDDDVQQT 240
           SAMNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKL+GK ARRMMTNLSIPPDDDVQQT
Sbjct: 181 SAMNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKLIGKNARRMMTNLSIPPDDDVQQT 240

Query: 241 LSFFEKIEARRGGLDMLSSNEESFRLLLESFPRMLLLSVESHVKPMVEFLEIIDIPKERM 300
           LSFFEKIEARRGGLDMLSS+EESFRLLLESFPRMLLLSVESHVKPMVEFLE I IPKERM
Sbjct: 241 LSFFEKIEARRGGLDMLSSSEESFRLLLESFPRMLLLSVESHVKPMVEFLEKISIPKERM 300

Query: 301 RSIFLLFPPVIFFDTEVLKSRILAFEEVGIEVTVVGKLLLKYPWITANCIQGNLKQIVSF 360
           RSIFLLFPPVIFFDTEVLKSRI+AFEEVG+EVTVVGKLL+KYPWI +NCI GNLKQI+SF
Sbjct: 301 RSIFLLFPPVIFFDTEVLKSRIMAFEEVGVEVTVVGKLLIKYPWIMSNCIDGNLKQIISF 360

Query: 361 FELEK------------------------------------------------------- 420
           FELEK                                                       
Sbjct: 361 FELEKASIENLPFNGFVWEGAKVKGDNTRYLFSFLLPLWFKLPFIFVLSIHILFLFIPSS 420

Query: 421 ----------------VPNASIINAISSWPLILGSSTSKLQLMVDRFGGLGVRSKKLGQV 480
                           VPNASIINAISSWPLILGSSTSKLQLMVDRF GLGVRSKKLGQV
Sbjct: 421 SHSVFLFAFPELNFYGVPNASIINAISSWPLILGSSTSKLQLMVDRFDGLGVRSKKLGQV 480

Query: 481 IATSPQILLQKPQEFLQVISFLEEIGFDKESVGRIITRCPEVSATSVEKTLKRKLEFLIS 540
           IATSPQILL +PQEFLQV+SFLEE+GFDKESVGRII RCPE+SATS+EKTLKRKLEFLIS
Sbjct: 481 IATSPQILLLEPQEFLQVVSFLEEVGFDKESVGRIIARCPEISATSIEKTLKRKLEFLIS 540

Query: 541 IGVSKTHLPRAIKKYPELLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYGIE 600
           IGVSKTHLPRAIKKYPELLVSDP KTLLPRIRYLRQRGLSERDIA MVGRFSPLLGY IE
Sbjct: 541 IGVSKTHLPRAIKKYPELLVSDPHKTLLPRIRYLRQRGLSERDIASMVGRFSPLLGYSIE 600

Query: 601 EVLRPKLDFLVNIMEKPIKEVVDYPRYFSYSLEKKIIPRFWVLKAMNVECSLKDMLGKND 609
           EVLRPKLDFLVNIMEKPIKEVVDYP                         SLKDMLGKND
Sbjct: 601 EVLRPKLDFLVNIMEKPIKEVVDYP-------------------------SLKDMLGKND 648

[Close]
BLAST of Clc03G00590 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 4.7e-29
Identity = 77/230 (33.48%), Postives = 135/230 (58.70%), Query Frame = 0 

Query: 369 IINAISSWPLILGSST-SKLQLMVDRFGGLGVRSKKLGQVIATSPQILLQKPQEFLQVI- 428
           + +AI+ +P IL  S   KL  ++  F  LGV   +LG++I  +P+++       L VI 
Sbjct: 95  VASAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIV 154

Query: 429 SFLEEIGFDKES-VGRIITRCPEVSATSVEKTLKRKLEFL-ISIGVSKTHLPRAIKKYPE 488
           SFL  +G D++  +G+++ + P +   SV+K L+   EFL  S+G+S+  +   +  +P+
Sbjct: 155 SFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQ 214

Query: 489 LLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYGIEEVLRPKLDFLVNIMEKP 548
           LL  D +K L P   YL++ G  +  IA MV  +  +L   ++  L+P++ FLV +M + 
Sbjct: 215 LLCRDVNKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRG 274

Query: 549 IKEVVDYPRYFSYSLEKKIIPRFWVLKAMNVECSLKDMLGKNDEEFAVEF 595
           + EV  YP +F + L+KK+  RF ++K  N++CSL++ML  N ++F  +F
Sbjct: 275 MDEVASYPEFFHHGLKKKVESRFKLVKKNNIDCSLREMLDCNTKKFHEKF 324

[Close]
BLAST of Clc03G00590 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 2.4e-25
Identity = 74/281 (26.33%), Postives = 137/281 (48.75%), Query Frame = 0 

Query: 312 DTE-VLKSRILAFEEVGIEVTVVGKLLLKYPWITANCIQGNLKQIVSFFELEKVPNASII 371
           DTE  L+ + L   ++G+ +  +  +  K+       + G +K +V F     +P + I 
Sbjct: 191 DTEGALRPQTLYLLDLGLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIP 250

Query: 372 NAISSWPLILG-SSTSKLQLMVDRFGGLGVRSKKLGQVIATSPQILLQKPQEFLQVISFL 431
             +   P I G S T  L+  +     LG+   +  ++I+  P IL    Q+    + FL
Sbjct: 251 TILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILTYSRQKLTSTVEFL 310

Query: 432 EEIGFDKESVGRIITRCPEVSATSVEKTLKRKLEFLISIGVSKTHLPRAIKKYPELLVSD 491
            + G  +E +GRI+TRCP + + SVE  L+  +E+  S+ V    L   + + P+     
Sbjct: 311 SQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTMEYFRSLNVDVAVL---LHRCPQTFGLS 370

Query: 492 PDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYGIEEVLRPKLDFLVNIMEKPIKEVV 551
            +  L P   +  ++G    +I  M+ R+  L  + ++E + PK D+    M+ P  E+V
Sbjct: 371 IESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYF-QTMDYPKSELV 430

Query: 552 DYPRYFSYSLEKKIIPRFWVLKAMNVECSLKDMLGKNDEEF 591
            +P++F YSL+++I PR+ +++   V   L  +L  +  EF
Sbjct: 431 KFPQFFGYSLQERIKPRYELVQRSGVRLLLNQVLSLSGIEF 467

[Close]
BLAST of Clc03G00590 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 4.1e-25
Identity = 79/310 (25.48%), Postives = 159/310 (51.29%), Query Frame = 0 

Query: 284 MVEFLEIIDIPKERMRSIFLLFPPVIFFDTEVLKSRILAFEEVGIEVTVVGKLLLKYPWI 343
           +VE+LE   + ++ M  +    P ++ F  E +KSR+  F ++G+     G ++  YP I
Sbjct: 284 IVEYLESNGVRRDWMGYVVGRCPELLSFSMEEVKSRVDFFLKMGMNQNDFGTMVYDYPKI 343

Query: 344 TANCIQGNLKQIVSFFELEKVPNASIINAISSWPLILGSS-TSKLQLMVDRFGGLGVRSK 403
                   +++ +++ +   +    +   ++  P ++G S   + + +V  F  LG+  +
Sbjct: 344 IGFFSFQVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKE 403

Query: 404 KLGQVIATSPQI-LLQKPQEFLQVISFLEEIGFDKESVGRIITRCPEVSATSVEKTLKRK 463
            + +++   P +  +   +     + FL+E+G   E++G ++ + P +   S+ K ++  
Sbjct: 404 GMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPV 463

Query: 464 LEFLIS-IGVSKTHLPRAIKKYPELLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSP 523
           + FL++  GV++  + + I   P LL       L P +RY    G+    +  M+  F  
Sbjct: 464 VIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPM 523

Query: 524 LLGYGIEEVLRPKLDFLVNIMEKPIKEVVDYPRYFSYSLEKKIIPRFWVLKAMNVECSLK 583
           LL Y ++  LRPK  +L   M +P+++++++PR+FSYSLE++IIPR  ++    V   L+
Sbjct: 524 LLRYNVDN-LRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENRVNFKLR 583

Query: 584 DMLGKNDEEF 591
            ML   DEEF
Sbjct: 584 YMLACTDEEF 592

[Close]
BLAST of Clc03G00590 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 109.0 bits (271), Expect = 1.9e-22
Identity = 66/196 (33.67%), Postives = 111/196 (56.63%), Query Frame = 0 

Query: 398 GVRSKKLGQVIATSPQILLQKPQ-EFLQVISFL-EEIGFDKESVGRIITRCPEVSATSVE 457
           G+    +G+++   P +L   P+ E L V+ FL  EI   ++ + + I+RCP +  +SV+
Sbjct: 76  GLSRPAVGRILDMFPDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVD 135

Query: 458 KTLKRKLEFLISIGVSKTHLPRAIKKYPELLVSDPDKTLLPRIRYLRQ-RGLSERDIAFM 517
             L+  L FL ++G           +   LLVS+ ++TL+P+I YL +  G +  ++A M
Sbjct: 136 YQLRPALTFLKTLGF--VGRDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKM 195

Query: 518 VGRFSPLLGYGIEEVLRPKLDFLVNIMEKPIKEVVDYPRYFSYSLEKKIIPRFWVLKAMN 577
           V R   LL Y ++  L PK++F +  M   +KE+  +P+YFS+SLE+KI PR  +LK   
Sbjct: 196 VVRSPALLTYSVDNNLVPKVEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHG 255

Query: 578 VECSLKDMLGKNDEEF 591
           +   L +ML  +D +F
Sbjct: 256 ILMPLSEMLKVSDGQF 269

[Close]
BLAST of Clc03G00590 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 6.2e-21
Identity = 87/373 (23.32%), Postives = 168/373 (45.04%), Query Frame = 0 

Query: 232 DDDVQQTLSFFEKIEARRGGLDMLSSNEESFRLLLES-FPRML-LLSVESHVKPMVEFLE 291
           +DD+   +S     E ++    +    + S R  +E  +PR+   + ++    P++++L 
Sbjct: 133 EDDLDLGISPNATSEKKKESWRLDGRGKMSSRKYVEKLYPRLAEEIDIDPKCVPLLDYLS 192

Query: 292 IIDIPKERMRSIFLLFPPVIFFDTEVLKSRILAFEEVGIEVTVVGKLLLKYPWITANCIQ 351
              + +     ++    P +  +    + R+     VG++   + ++LL+ P I    ++
Sbjct: 193 TFGLKESHFVQMYERHMPSLQINVFSAQERLDYLLSVGVKHRDIKRMLLRQPQILQYTVE 252

Query: 352 GNLKQIVSFFELEKVPNASIINAISSWPLILGSSTSKLQLMVDRFGGLGVRSKKLGQVIA 411
            NLK  +SF                              LM     GLG+ + K+GQ++A
Sbjct: 253 NNLKAHISF------------------------------LM-----GLGIPNSKIGQIVA 312

Query: 412 TSPQILLQKPQEFLQ--VISFLEEIGFDKESVGRIITRCPEVSATSVEKTLKRKLEFLI- 471
            +P +     +  L+  +   +EE+G  +  VG+++   P++    ++ T   +  FL  
Sbjct: 313 ATPSLFSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSK 372

Query: 472 SIGVSKTHLPRAIKKYPELLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYGI 531
            +G  +  + + +KK+P+LL    D   LPRI +LR  G+   DI  ++   + +L   +
Sbjct: 373 ELGAPRDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSL 432

Query: 532 EEVLRPKLDFLVNIMEKPIKEVVDYPRYFSYSLEKKIIP--RFWV-LKAMNVECSLKDML 591
           E+ L+PK  +LVN +   +  +  YP Y S SL+++I P  RF V LK +         L
Sbjct: 433 EDNLKPKYMYLVNELNNEVHILTKYPMYLSLSLDQRIRPRHRFLVELKKVRKGPFPLSSL 470

Query: 592 GKNDEEFAVEFMG 597
             NDE F  ++ G
Sbjct: 493 VPNDESFCQQWAG 470

[Close]
BLAST of Clc03G00590 vs. ExPASy TrEMBL
Match: A0A1S3C6K3 (transcription termination factor MTERF2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497057 PE=3 SV=1)

HSP 1 Score: 1036.9 bits (2680), Expect = 3.2e-299
Identity = 542/610 (88.85%), Postives = 561/610 (91.97%), Query Frame = 0 

Query: 1   MAAMASF--FFPIPTINGCTKSSPLIPLHRFILPQSLSFFPLNFRPFSSRFHSFLASSHF 60
           MA MASF  FFPIPTIN CTKSSPLIPLHRFILPQS     LNF PF SRFHS L SSHF
Sbjct: 1   MATMASFFLFFPIPTINACTKSSPLIPLHRFILPQS-----LNFCPFPSRFHSLLTSSHF 60

Query: 61  VPFASTSSDALPFSDGSPEEDPLHSLAEARLAVSEYLQRFGVSEDESVSIASNSPRFLKM 120
           +P AS S DALPFSD +PEEDPL SLAEA+LAVSEYLQRFGVSEDESVSIASNSPRFLKM
Sbjct: 61  LPLASISHDALPFSDDTPEEDPLQSLAEAQLAVSEYLQRFGVSEDESVSIASNSPRFLKM 120

Query: 121 LVDGVRELDETSMWISWSKEGEEQPLADDFGFKEKVALMAMEKGDCGKVAFLESVGMNLS 180
           LVD VRELDETSMW+SWSKE  E    D FGFKEKVALMAMEKGDCG+VAFLESVGMNLS
Sbjct: 121 LVDAVRELDETSMWVSWSKERGE---LDGFGFKEKVALMAMEKGDCGQVAFLESVGMNLS 180

Query: 181 SAMNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKLLGKCARRMMTNLSIPPDDDVQQT 240
           SAMNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKL+GK ARRMMTNLSIPPDDDVQQT
Sbjct: 181 SAMNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKLIGKNARRMMTNLSIPPDDDVQQT 240

Query: 241 LSFFEKIEARRGGLDMLSSNEESFRLLLESFPRMLLLSVESHVKPMVEFLEIIDIPKERM 300
           LSFFEKIEARRGGLDMLSS+EESFRLLLESFPRMLLLSVESHVKPMVEFLE I IPKERM
Sbjct: 241 LSFFEKIEARRGGLDMLSSSEESFRLLLESFPRMLLLSVESHVKPMVEFLEKISIPKERM 300

Query: 301 RSIFLLFPPVIFFDTEVLKSRILAFEEVGIEVTVVGKLLLKYPWITANCIQGNLKQIVSF 360
           RSIFLLFPPVIFFDTEVLKSRI+AFEEVG+EVTVVGKLL+KYPWI +NCI GNLKQI+SF
Sbjct: 301 RSIFLLFPPVIFFDTEVLKSRIMAFEEVGVEVTVVGKLLIKYPWIMSNCIDGNLKQIISF 360

Query: 361 FELEKVPNASIINAISSWPLILGSSTSKLQLMVDRFGGLGVRSKKLGQVIATSPQILLQK 420
           FELEKVPNASIINAISSWPLILGSSTSKLQLMVDRF GLGVRSKKLGQVIATSPQILL +
Sbjct: 361 FELEKVPNASIINAISSWPLILGSSTSKLQLMVDRFDGLGVRSKKLGQVIATSPQILLLE 420

Query: 421 PQEFLQVISFLEEIGFDKESVGRIITRCPEVSATSVEKTLKRKLEFLISIGVSKTHLPRA 480
           PQEFLQV+SFLEE+GFDKESVGRII RCPE+SATS+EKTLKRKLEFLISIGVSKTHLPRA
Sbjct: 421 PQEFLQVVSFLEEVGFDKESVGRIIARCPEISATSIEKTLKRKLEFLISIGVSKTHLPRA 480

Query: 481 IKKYPELLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYGIEEVLRPKLDFLV 540
           IKKYPELLVSDP KTLLPRIRYLRQRGLSERDIA MVGRFSPLLGY IEEVLRPKLDFLV
Sbjct: 481 IKKYPELLVSDPHKTLLPRIRYLRQRGLSERDIASMVGRFSPLLGYSIEEVLRPKLDFLV 540

Query: 541 NIMEKPIKEVVDYPRYFSYSLEKKIIPRFWVLKAMNVECSLKDMLGKNDEEFAVEFMGYK 600
           NIMEKPIKEVVDYPRYFSYSLE KIIPRF VLK MNVECSLKDMLGKNDEEF+V F+ YK
Sbjct: 541 NIMEKPIKEVVDYPRYFSYSLENKIIPRFLVLKGMNVECSLKDMLGKNDEEFSVAFLNYK 600

Query: 601 GTKHLSSSPT 609
            T      PT
Sbjct: 601 RTAEHLRPPT 602

[Close]
BLAST of Clc03G00590 vs. ExPASy TrEMBL
Match: A0A0A0LV84 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532380 PE=3 SV=1)

HSP 1 Score: 986.1 bits (2548), Expect = 6.5e-284
Identity = 521/599 (86.98%), Postives = 540/599 (90.15%), Query Frame = 0 

Query: 4   MASF--FFPIPTINGCTKSSPLIPLHRFILPQSLSFFPLNFRPFSSRFHSFLASSHFVPF 63
           MASF  FFP PTI G +KSSPLIPLH  ILPQS     LNF PF SRFHS L SSHF+P 
Sbjct: 1   MASFFLFFPTPTITGSSKSSPLIPLHPSILPQS-----LNFCPFPSRFHSLLTSSHFLPL 60

Query: 64  ASTSSDALPFSDGSPEEDPLHSLAEARLAVSEYLQRFGVSEDESVSIASNSPRFLKMLVD 123
           AS S DALPFSD  P+EDPLHSLAEA+LAVSEYLQRFGV EDE+VSIASNSPRFLKMLVD
Sbjct: 61  ASISPDALPFSDDPPQEDPLHSLAEAQLAVSEYLQRFGVLEDEAVSIASNSPRFLKMLVD 120

Query: 124 GVRELDETSMWISWSKEGEEQPLADDFGFKEKVALMAMEKGDCGKVAFLESVGMNLSSAM 183
            VRELDETSMW SWSKE  E    D FGFKEKVA MAMEKGDCGKVAFLESVGMNLSSAM
Sbjct: 121 AVRELDETSMWDSWSKERGE---LDGFGFKEKVASMAMEKGDCGKVAFLESVGMNLSSAM 180

Query: 184 NVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKLLGKCARRMMTNLSIPPDDDVQQTLSF 243
           NVARYLSGEMLPSLIYKVKYMK LFFSGSGDG L+GK ARRMMTNLSIPPDDDVQQTLSF
Sbjct: 181 NVARYLSGEMLPSLIYKVKYMKALFFSGSGDGILIGKNARRMMTNLSIPPDDDVQQTLSF 240

Query: 244 FEKIEARRGGLDMLSSNEESFRLLLESFPRMLLLSVESHVKPMVEFLEIIDIPKERMRSI 303
           FEKIEARRGGLDMLSSNEESF LLLESFPRMLLLSVESHVKPMVEFLE I IPKERMRSI
Sbjct: 241 FEKIEARRGGLDMLSSNEESFGLLLESFPRMLLLSVESHVKPMVEFLEKIGIPKERMRSI 300

Query: 304 FLLFPPVIFFDTEVLKSRILAFEEVGIEVTVVGKLLLKYPWITANCIQGNLKQIVSFFEL 363
           FLLFPPVIFFDTEVLKSRI+AFEEVG+EVTV GKLLLKYPWIT+NCI GNLKQIVSFFE 
Sbjct: 301 FLLFPPVIFFDTEVLKSRIMAFEEVGVEVTVFGKLLLKYPWITSNCIHGNLKQIVSFFES 360

Query: 364 EKVPNASIINAISSWPLILGSSTSKLQLMVDRFGGLGVRSKKLGQVIATSPQILLQKPQE 423
           EKVP+ASIINAISSWPLILGSSTSKL+LMVDR  GLGVRSKKLGQVIATSPQILL KPQE
Sbjct: 361 EKVPSASIINAISSWPLILGSSTSKLELMVDRLDGLGVRSKKLGQVIATSPQILLLKPQE 420

Query: 424 FLQVISFLEEIGFDKESVGRIITRCPEVSATSVEKTLKRKLEFLISIGVSKTHLPRAIKK 483
           FLQV+SFLEE+GFDKES+GRII RCPE+SATSVEKTLKRKLEFLI IGVSKTHLPRAIKK
Sbjct: 421 FLQVVSFLEEVGFDKESIGRIIARCPEISATSVEKTLKRKLEFLIKIGVSKTHLPRAIKK 480

Query: 484 YPELLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYGIEEVLRPKLDFLVNIM 543
           YPELLVSDP KTL PRI+YLRQRGLSERDIA MV RFSPLLGY IEEVLRPKLDFLVNIM
Sbjct: 481 YPELLVSDPHKTLHPRIKYLRQRGLSERDIASMVVRFSPLLGYSIEEVLRPKLDFLVNIM 540

Query: 544 EKPIKEVVDYPRYFSYSLEKKIIPRFWVLKAMNVECSLKDMLGKNDEEFAVEFMGYKGT 601
           +KP KEVVDYPRYFSYSLE KIIPRF  LK MNVECSLKDMLGKNDEEF+V F+G K T
Sbjct: 541 KKPKKEVVDYPRYFSYSLENKIIPRFRALKGMNVECSLKDMLGKNDEEFSVAFLGNKRT 591

[Close]
BLAST of Clc03G00590 vs. ExPASy TrEMBL
Match: A0A5A7UZF1 (Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold340G00730 PE=3 SV=1)

HSP 1 Score: 979.9 bits (2532), Expect = 4.7e-282
Identity = 520/610 (85.25%), Postives = 539/610 (88.36%), Query Frame = 0 

Query: 1   MAAMASF--FFPIPTINGCTKSSPLIPLHRFILPQSLSFFPLNFRPFSSRFHSFLASSHF 60
           MA MASF  FFPIPTIN CTKSSPLIPLHRFILPQS     LNF PF SRFHS L SSHF
Sbjct: 1   MATMASFFLFFPIPTINACTKSSPLIPLHRFILPQS-----LNFCPFPSRFHSLLTSSHF 60

Query: 61  VPFASTSSDALPFSDGSPEEDPLHSLAEARLAVSEYLQRFGVSEDESVSIASNSPRFLKM 120
           +P AS S DALPFSD +PEEDPL SLAEA+LAVSEYLQRFGVSEDESVSIASNSPRFLKM
Sbjct: 61  LPLASISHDALPFSDDTPEEDPLQSLAEAQLAVSEYLQRFGVSEDESVSIASNSPRFLKM 120

Query: 121 LVDGVRELDETSMWISWSKEGEEQPLADDFGFKEKVALMAMEKGDCGKVAFLESVGMNLS 180
           LVD VRELDETSMW+SWSKE  E    D FGFKEKVALMAMEKGDCGKVAFLESVGMNLS
Sbjct: 121 LVDAVRELDETSMWVSWSKERGE---LDGFGFKEKVALMAMEKGDCGKVAFLESVGMNLS 180

Query: 181 SAMNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKLLGKCARRMMTNLSIPPDDDVQQT 240
           SAMNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKL+GK ARRMMTNLSIPPDDDVQQT
Sbjct: 181 SAMNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKLIGKNARRMMTNLSIPPDDDVQQT 240

Query: 241 LSFFEKIEARRGGLDMLSSNEESFRLLLESFPRMLLLSVESHVKPMVEFLEIIDIPKERM 300
           LSFFEKIEARRGGLDMLSS+EESFRLLLESFPRMLLLSVESHVKPMVEFLE I IPKERM
Sbjct: 241 LSFFEKIEARRGGLDMLSSSEESFRLLLESFPRMLLLSVESHVKPMVEFLEKISIPKERM 300

Query: 301 RSIFLLFPPVIFFDTEVLKSRILAFEEVGIEVTVVGKLLLKYPWITANCIQGNLKQIVSF 360
           RSIFLLFPPVIFFDTEVL+SRI+AFEEVG+EVTVVGKLL+KYPWI +NCI GNLKQI+SF
Sbjct: 301 RSIFLLFPPVIFFDTEVLRSRIMAFEEVGVEVTVVGKLLIKYPWIMSNCIDGNLKQIISF 360

Query: 361 FELEKVPNASIINAISSWPLILGSSTSKLQLMVDRFGGLGVRSKKLGQVIATSPQILLQK 420
           FELEKVPNASIINAISSWPLILGSSTSKLQLMVDRF GLGVRSKKLGQVIATSPQILL +
Sbjct: 361 FELEKVPNASIINAISSWPLILGSSTSKLQLMVDRFDGLGVRSKKLGQVIATSPQILLLE 420

Query: 421 PQEFLQVISFLEEIGFDKESVGRIITRCPEVSATSVEKTLKRKLEFLISIGVSKTHLPRA 480
           PQEFLQV+SFLEE+GFDKESVGRII RCPE+SATS+EKTLKRKLEFLISIGVSKTHLPRA
Sbjct: 421 PQEFLQVVSFLEEVGFDKESVGRIIARCPEISATSIEKTLKRKLEFLISIGVSKTHLPRA 480

Query: 481 IKKYPELLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYGIEEVLRPKLDFLV 540
           IKKYPELLVSDP KTLLPRIRYLRQRGLSERDIA MVGRFSPLLGY IEEVLRPKLDFLV
Sbjct: 481 IKKYPELLVSDPHKTLLPRIRYLRQRGLSERDIASMVGRFSPLLGYSIEEVLRPKLDFLV 540

Query: 541 NIMEKPIKEVVDYPRYFSYSLEKKIIPRFWVLKAMNVECSLKDMLGKNDEEFAVEFMGYK 600
           NIMEKPIKEVVDYP                         SLKDMLGKNDEEF+V F+ YK
Sbjct: 541 NIMEKPIKEVVDYP-------------------------SLKDMLGKNDEEFSVAFLNYK 577

Query: 601 GTKHLSSSPT 609
            T      PT
Sbjct: 601 RTAEHLRPPT 577

[Close]
BLAST of Clc03G00590 vs. ExPASy TrEMBL
Match: A0A5D3BE49 (Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00780 PE=3 SV=1)

HSP 1 Score: 948.0 bits (2449), Expect = 2.0e-272
Identity = 520/681 (76.36%), Postives = 539/681 (79.15%), Query Frame = 0 

Query: 1   MAAMASF--FFPIPTINGCTKSSPLIPLHRFILPQSLSFFPLNFRPFSSRFHSFLASSHF 60
           MA MASF  FFPIPTIN CTKSSPLIPLHRFILPQS     LNF PF SRFHS L SSHF
Sbjct: 1   MATMASFFLFFPIPTINACTKSSPLIPLHRFILPQS-----LNFCPFPSRFHSLLTSSHF 60

Query: 61  VPFASTSSDALPFSDGSPEEDPLHSLAEARLAVSEYLQRFGVSEDESVSIASNSPRFLKM 120
           +P AS S DALPFSD +PEEDPL SLAEA+LAVSEYLQRFGVSEDESVSIASNSPRFLKM
Sbjct: 61  LPLASISHDALPFSDDTPEEDPLQSLAEAQLAVSEYLQRFGVSEDESVSIASNSPRFLKM 120

Query: 121 LVDGVRELDETSMWISWSKEGEEQPLADDFGFKEKVALMAMEKGDCGKVAFLESVGMNLS 180
           LVD VRELDETSMW+SWSKE  E    D FGFKEKVALMAMEKGDCG+VAFLESVGMNLS
Sbjct: 121 LVDAVRELDETSMWVSWSKERGE---LDGFGFKEKVALMAMEKGDCGQVAFLESVGMNLS 180

Query: 181 SAMNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKLLGKCARRMMTNLSIPPDDDVQQT 240
           SAMNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKL+GK ARRMMTNLSIPPDDDVQQT
Sbjct: 181 SAMNVARYLSGEMLPSLIYKVKYMKELFFSGSGDGKLIGKNARRMMTNLSIPPDDDVQQT 240

Query: 241 LSFFEKIEARRGGLDMLSSNEESFRLLLESFPRMLLLSVESHVKPMVEFLEIIDIPKERM 300
           LSFFEKIEARRGGLDMLSS+EESFRLLLESFPRMLLLSVESHVKPMVEFLE I IPKERM
Sbjct: 241 LSFFEKIEARRGGLDMLSSSEESFRLLLESFPRMLLLSVESHVKPMVEFLEKISIPKERM 300

Query: 301 RSIFLLFPPVIFFDTEVLKSRILAFEEVGIEVTVVGKLLLKYPWITANCIQGNLKQIVSF 360
           RSIFLLFPPVIFFDTEVLKSRI+AFEEVG+EVTVVGKLL+KYPWI +NCI GNLKQI+SF
Sbjct: 301 RSIFLLFPPVIFFDTEVLKSRIMAFEEVGVEVTVVGKLLIKYPWIMSNCIDGNLKQIISF 360

Query: 361 FELEK------------------------------------------------------- 420
           FELEK                                                       
Sbjct: 361 FELEKASIENLPFNGFVWEGAKVKGDNTRYLFSFLLPLWFKLPFIFVLSIHILFLFIPSS 420

Query: 421 ----------------VPNASIINAISSWPLILGSSTSKLQLMVDRFGGLGVRSKKLGQV 480
                           VPNASIINAISSWPLILGSSTSKLQLMVDRF GLGVRSKKLGQV
Sbjct: 421 SHSVFLFAFPELNFYGVPNASIINAISSWPLILGSSTSKLQLMVDRFDGLGVRSKKLGQV 480

Query: 481 IATSPQILLQKPQEFLQVISFLEEIGFDKESVGRIITRCPEVSATSVEKTLKRKLEFLIS 540
           IATSPQILL +PQEFLQV+SFLEE+GFDKESVGRII RCPE+SATS+EKTLKRKLEFLIS
Sbjct: 481 IATSPQILLLEPQEFLQVVSFLEEVGFDKESVGRIIARCPEISATSIEKTLKRKLEFLIS 540

Query: 541 IGVSKTHLPRAIKKYPELLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYGIE 600
           IGVSKTHLPRAIKKYPELLVSDP KTLLPRIRYLRQRGLSERDIA MVGRFSPLLGY IE
Sbjct: 541 IGVSKTHLPRAIKKYPELLVSDPHKTLLPRIRYLRQRGLSERDIASMVGRFSPLLGYSIE 600

Query: 601 EVLRPKLDFLVNIMEKPIKEVVDYPRYFSYSLEKKIIPRFWVLKAMNVECSLKDMLGKND 609
           EVLRPKLDFLVNIMEKPIKEVVDYP                         SLKDMLGKND
Sbjct: 601 EVLRPKLDFLVNIMEKPIKEVVDYP-------------------------SLKDMLGKND 648

[Close]
BLAST of Clc03G00590 vs. ExPASy TrEMBL
Match: A0A6J1GD59 (transcription termination factor MTERF2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452868 PE=3 SV=1)

HSP 1 Score: 939.1 bits (2426), Expect = 9.2e-270
Identity = 491/597 (82.24%), Postives = 525/597 (87.94%), Query Frame = 0 

Query: 4   MASFFFPIPTINGCTKSSPLIPLHRFILPQSLSFFPLNFRPFSSRFHSFLASSHFVPFAS 63
           MAS FFPIPTI+   KSS  IP++RF L Q  S  PL+  PF SRFH    SS F+P AS
Sbjct: 1   MASVFFPIPTIHRSFKSSTPIPINRFSLSQPRSLLPLDSCPFRSRFHFSSTSSRFIPLAS 60

Query: 64  TSSDALPFSDGSPEEDPLHSLAEARLAVSEYLQRFGVSEDESVSIASNSPRFLKMLVDGV 123
           TSSD        P +D L+SL EARLAVSEYLQR GVSE+ESVSIASNSPRFLKMLVDGV
Sbjct: 61  TSSDV-------PPDDSLNSLEEARLAVSEYLQRLGVSEEESVSIASNSPRFLKMLVDGV 120

Query: 124 RELDETSMWISWSKEGEEQPLADDFGFKEKVALMAMEKGDCGKVAFLESVGMNLSSAMNV 183
           RELDETSMWISWS EG E+P+ D FGFKEKVALMA EKGD GKVAFLES GMNLSSAMNV
Sbjct: 121 RELDETSMWISWSSEG-ERPVGDGFGFKEKVALMAREKGDNGKVAFLESAGMNLSSAMNV 180

Query: 184 ARYLSGEMLPSLIYKVKYMKELFFSGSGDGKLLGKCARRMMTNLSIPPDDDVQQTLSFFE 243
           ARYLSGEMLPSLIYKVKYMKELFFSGSGDGK +GK ARRMMTN SIPPDDDVQQTLSFFE
Sbjct: 181 ARYLSGEMLPSLIYKVKYMKELFFSGSGDGKFIGKSARRMMTNFSIPPDDDVQQTLSFFE 240

Query: 244 KIEARRGGLDMLSSNEESFRLLLESFPRMLLLSVESHVKPMVEFLEIIDIPKERMRSIFL 303
           KIEARRGGLDMLSSNEESFRLLLESFPRMLLLS++SHVKPMVEFLE I IPKERMR IFL
Sbjct: 241 KIEARRGGLDMLSSNEESFRLLLESFPRMLLLSIQSHVKPMVEFLEAIGIPKERMRGIFL 300

Query: 304 LFPPVIFFDTEVLKSRILAFEEVGIEVTVVGKLLLKYPWITANCIQGNLKQIVSFFELEK 363
            FPP+IFF TEVLKSRI+ FE+VGI     GKLL KYPWIT+NCIQ NLKQIVSFFELEK
Sbjct: 301 SFPPIIFFGTEVLKSRIMTFEKVGIVEMEFGKLLPKYPWITSNCIQCNLKQIVSFFELEK 360

Query: 364 VPNASIINAISSWPLILGSSTSKLQLMVDRFGGLGVRSKKLGQVIATSPQILLQKPQEFL 423
           VPNASI +AI SWPLILGSS SKL+LMVD F  LGVRSKKLGQVIATSPQ+LLQ+PQEFL
Sbjct: 361 VPNASITDAIRSWPLILGSSASKLELMVDSFDELGVRSKKLGQVIATSPQLLLQRPQEFL 420

Query: 424 QVISFLEEIGFDKESVGRIITRCPEVSATSVEKTLKRKLEFLISIGVSKTHLPRAIKKYP 483
           QV+S+LEEIGFDKESVGRI+ RCPE+ ATSVEKTL+RKLEFLISIGVSKTHLPRAI+KYP
Sbjct: 421 QVVSYLEEIGFDKESVGRILARCPEIFATSVEKTLRRKLEFLISIGVSKTHLPRAIRKYP 480

Query: 484 ELLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYGIEEVLRPKLDFLVNIMEK 543
           ELLVSDPD+TL PRIRYLRQRGLS+RDIAFMVGRFSPLLGY IEEVL+PKLDFLVN+MEK
Sbjct: 481 ELLVSDPDRTLFPRIRYLRQRGLSKRDIAFMVGRFSPLLGYSIEEVLKPKLDFLVNVMEK 540

Query: 544 PIKEVVDYPRYFSYSLEKKIIPRFWVLKAMNVECSLKDMLGKNDEEFAVEFMGYKGT 601
           PIKEVV+YPRYFSYSLEKKI PRF VLK  N+EC+LKDMLGKNDEEFAV FMG KGT
Sbjct: 541 PIKEVVEYPRYFSYSLEKKITPRFRVLKERNIECNLKDMLGKNDEEFAVMFMGDKGT 589

[Close]
BLAST of Clc03G00590 vs. TAIR 10
Match: AT1G78930.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 587.0 bits (1512), Expect = 1.7e-167
Identity = 315/587 (53.66%), Postives = 413/587 (70.36%), Query Frame = 0 

Query: 12  PTINGCTKSSPLIPLHRFILPQSLSFFPLNFRPFSSRFHSFLASSHFVPFASTSSDALPF 71
           P +  C  SS  +    F  P+ ++ FP         +HS            T S +L  
Sbjct: 18  PPLKSCNFSSSSL----FFSPRRVTLFP--------AYHSGRV---------TVSASLQH 77

Query: 72  SDGSPEEDPLHSLAEARLAVSEYLQR-FGVSEDESVSIASNSPRFLKMLVDGVRELDETS 131
            D +   +   +  EA+ +++ +L+R  G+SE +S  I+SN P++ +M+V+GVR+L+E  
Sbjct: 78  GDSNFSSNSSQTNQEAQNSIAGFLRRDTGLSEADSDFISSNCPKYTRMIVEGVRDLEE-- 137

Query: 132 MWISWSKEGEEQPLADDFGFKEKVALMAMEKGDCGKVAFLESVGMNLSSAMNVARYLSGE 191
            W SW   GE + + +  GFKEKV  M  +KGD GKVAFLES+G++LSSAM +A Y+S E
Sbjct: 138 -WNSWKGSGESERVEEGLGFKEKVIYMVKQKGDGGKVAFLESLGLSLSSAMYLAHYVSSE 197

Query: 192 MLPSLIYKVKYMKELFFSGSGDGKLLGKCARRMMTNLSIPPDDDVQQTLSFFEKIEARRG 251
            LP L+ KVKY+KE+FFSGS +  L+GK ARRMM  LSIP D+DVQQTLSFFEKIEARRG
Sbjct: 198 SLPILLDKVKYLKEIFFSGSDEKGLVGKYARRMMLYLSIPIDEDVQQTLSFFEKIEARRG 257

Query: 252 GLDMLSSNEESFRLLLESFPRMLLLSVESHVKPMVEFLEIIDIPKERMRSIFLLFPPVIF 311
           GLDML S + SFR LLESFPR+LLLS E+ +KPMVEFLE I IPK  +  + LL+PP++ 
Sbjct: 258 GLDMLGSVDASFRFLLESFPRLLLLSEENDMKPMVEFLESIGIPKYCLGKVLLLYPPIML 317

Query: 312 FDTEVLKSRI-LAFEEVGIEVTVVGKLLLKYPWITANCIQGNLKQIVSFFELEKVPNASI 371
             TE +K R+  A E+V +     GKLLLKYPWI +  IQ N   I SFF  E V    I
Sbjct: 318 GKTEEIKRRVATAMEKVSVVNKDSGKLLLKYPWILSPSIQENYSHIGSFFYSESVLKMDI 377

Query: 372 INAISSWPLILGSSTSKLQLMVDRFGGLGVRSKKLGQVIATSPQILLQKPQEFLQVISFL 431
            +AI  WPL+LG S S +++MV  F  LGVR K++G+VI   PQ+LL KPQEFL+V+ FL
Sbjct: 378 DHAIRRWPLLLGCSASNMEMMVKEFDKLGVRDKRMGKVIPKMPQLLLCKPQEFLKVVCFL 437

Query: 432 EEIGFDKESVGRIITRCPEVSATSVEKTLKRKLEFLISIGVSKTHLPRAIKKYPELLVSD 491
           E++GF KE VG+I+ RCPE+   S+EKTL++KL FL   GVS TH PR IKKYPE L+ D
Sbjct: 438 EDLGFQKEIVGQILCRCPEIFGCSIEKTLQKKLIFLTRFGVSTTHFPRIIKKYPEFLIYD 497

Query: 492 PDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYGIEEVLRPKLDFLVNIMEKPIKEVV 551
            DKT+LPR++YL + G+SER+IAFM+ +FSP+LGY I++VLRPK +FLVN MEKP++EV+
Sbjct: 498 ADKTVLPRLKYLMEIGISEREIAFMIRKFSPILGYSIDKVLRPKFEFLVNSMEKPVREVI 557

Query: 552 DYPRYFSYSLEKKIIPRFWVLKAMNVECSLKDMLGKNDEEFAVEFMG 597
           +YPRYFSYSLEK+I PRF VLK  N+EC+L++MLGKNDEEFA +F+G
Sbjct: 558 EYPRYFSYSLEKRIKPRFRVLKGRNIECTLQEMLGKNDEEFAADFLG 580

[Close]
BLAST of Clc03G00590 vs. TAIR 10
Match: AT4G38160.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 131.0 bits (328), Expect = 3.3e-30
Identity = 77/230 (33.48%), Postives = 135/230 (58.70%), Query Frame = 0 

Query: 369 IINAISSWPLILGSST-SKLQLMVDRFGGLGVRSKKLGQVIATSPQILLQKPQEFLQVI- 428
           + +AI+ +P IL  S   KL  ++  F  LGV   +LG++I  +P+++       L VI 
Sbjct: 95  VASAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIV 154

Query: 429 SFLEEIGFDKES-VGRIITRCPEVSATSVEKTLKRKLEFL-ISIGVSKTHLPRAIKKYPE 488
           SFL  +G D++  +G+++ + P +   SV+K L+   EFL  S+G+S+  +   +  +P+
Sbjct: 155 SFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQ 214

Query: 489 LLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYGIEEVLRPKLDFLVNIMEKP 548
           LL  D +K L P   YL++ G  +  IA MV  +  +L   ++  L+P++ FLV +M + 
Sbjct: 215 LLCRDVNKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRG 274

Query: 549 IKEVVDYPRYFSYSLEKKIIPRFWVLKAMNVECSLKDMLGKNDEEFAVEF 595
           + EV  YP +F + L+KK+  RF ++K  N++CSL++ML  N ++F  +F
Sbjct: 275 MDEVASYPEFFHHGLKKKVESRFKLVKKNNIDCSLREMLDCNTKKFHEKF 324

[Close]
BLAST of Clc03G00590 vs. TAIR 10
Match: AT4G38160.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 131.0 bits (328), Expect = 3.3e-30
Identity = 77/230 (33.48%), Postives = 135/230 (58.70%), Query Frame = 0 

Query: 369 IINAISSWPLILGSST-SKLQLMVDRFGGLGVRSKKLGQVIATSPQILLQKPQEFLQVI- 428
           + +AI+ +P IL  S   KL  ++  F  LGV   +LG++I  +P+++       L VI 
Sbjct: 95  VASAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIV 154

Query: 429 SFLEEIGFDKES-VGRIITRCPEVSATSVEKTLKRKLEFL-ISIGVSKTHLPRAIKKYPE 488
           SFL  +G D++  +G+++ + P +   SV+K L+   EFL  S+G+S+  +   +  +P+
Sbjct: 155 SFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQ 214

Query: 489 LLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYGIEEVLRPKLDFLVNIMEKP 548
           LL  D +K L P   YL++ G  +  IA MV  +  +L   ++  L+P++ FLV +M + 
Sbjct: 215 LLCRDVNKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRG 274

Query: 549 IKEVVDYPRYFSYSLEKKIIPRFWVLKAMNVECSLKDMLGKNDEEFAVEF 595
           + EV  YP +F + L+KK+  RF ++K  N++CSL++ML  N ++F  +F
Sbjct: 275 MDEVASYPEFFHHGLKKKVESRFKLVKKNNIDCSLREMLDCNTKKFHEKF 324

[Close]
BLAST of Clc03G00590 vs. TAIR 10
Match: AT4G38160.3 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 131.0 bits (328), Expect = 3.3e-30
Identity = 77/230 (33.48%), Postives = 135/230 (58.70%), Query Frame = 0 

Query: 369 IINAISSWPLILGSST-SKLQLMVDRFGGLGVRSKKLGQVIATSPQILLQKPQEFLQVI- 428
           + +AI+ +P IL  S   KL  ++  F  LGV   +LG++I  +P+++       L VI 
Sbjct: 95  VASAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIV 154

Query: 429 SFLEEIGFDKES-VGRIITRCPEVSATSVEKTLKRKLEFL-ISIGVSKTHLPRAIKKYPE 488
           SFL  +G D++  +G+++ + P +   SV+K L+   EFL  S+G+S+  +   +  +P+
Sbjct: 155 SFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQ 214

Query: 489 LLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSPLLGYGIEEVLRPKLDFLVNIMEKP 548
           LL  D +K L P   YL++ G  +  IA MV  +  +L   ++  L+P++ FLV +M + 
Sbjct: 215 LLCRDVNKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRG 274

Query: 549 IKEVVDYPRYFSYSLEKKIIPRFWVLKAMNVECSLKDMLGKNDEEFAVEF 595
           + EV  YP +F + L+KK+  RF ++K  N++CSL++ML  N ++F  +F
Sbjct: 275 MDEVASYPEFFHHGLKKKVESRFKLVKKNNIDCSLREMLDCNTKKFHEKF 324

[Close]
BLAST of Clc03G00590 vs. TAIR 10
Match: AT2G21710.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 117.9 bits (294), Expect = 2.9e-26
Identity = 79/310 (25.48%), Postives = 159/310 (51.29%), Query Frame = 0 

Query: 284 MVEFLEIIDIPKERMRSIFLLFPPVIFFDTEVLKSRILAFEEVGIEVTVVGKLLLKYPWI 343
           +VE+LE   + ++ M  +    P ++ F  E +KSR+  F ++G+     G ++  YP I
Sbjct: 284 IVEYLESNGVRRDWMGYVVGRCPELLSFSMEEVKSRVDFFLKMGMNQNDFGTMVYDYPKI 343

Query: 344 TANCIQGNLKQIVSFFELEKVPNASIINAISSWPLILGSS-TSKLQLMVDRFGGLGVRSK 403
                   +++ +++ +   +    +   ++  P ++G S   + + +V  F  LG+  +
Sbjct: 344 IGFFSFQVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKE 403

Query: 404 KLGQVIATSPQI-LLQKPQEFLQVISFLEEIGFDKESVGRIITRCPEVSATSVEKTLKRK 463
            + +++   P +  +   +     + FL+E+G   E++G ++ + P +   S+ K ++  
Sbjct: 404 GMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPV 463

Query: 464 LEFLIS-IGVSKTHLPRAIKKYPELLVSDPDKTLLPRIRYLRQRGLSERDIAFMVGRFSP 523
           + FL++  GV++  + + I   P LL       L P +RY    G+    +  M+  F  
Sbjct: 464 VIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPM 523

Query: 524 LLGYGIEEVLRPKLDFLVNIMEKPIKEVVDYPRYFSYSLEKKIIPRFWVLKAMNVECSLK 583
           LL Y ++  LRPK  +L   M +P+++++++PR+FSYSLE++IIPR  ++    V   L+
Sbjct: 524 LLRYNVDN-LRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENRVNFKLR 583

Query: 584 DMLGKNDEEF 591
            ML   DEEF
Sbjct: 584 YMLACTDEEF 592

The following BLAST results are available for this feature:
BLAST of Clc03G00590 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038895303.19.3e-30991.03transcription termination factor MTERF4, chloroplastic [Benincasa hispida] >XP_0... [more]
XP_008457343.16.7e-29988.85PREDICTED: transcription termination factor MTERF2, chloroplastic [Cucumis melo][more]
XP_004145310.24.6e-28486.71transcription termination factor MTERF2, chloroplastic [Cucumis sativus] >KAE865... [more]
KAA0060027.19.7e-28285.25transcription termination factor MTERF2 [Cucumis melo var. makuwa][more]
TYJ97284.14.1e-27276.36transcription termination factor MTERF2 [Cucumis melo var. makuwa][more]
BLAST of Clc03G00590 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SZL64.7e-2933.48Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop... [more]
F4JVI32.4e-2526.33Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O... [more]
F4IHL34.1e-2525.48Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O... [more]
Q84X531.9e-2233.67Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX... [more]
Q9FM806.2e-2123.32Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O... [more]
BLAST of Clc03G00590 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3C6K33.2e-29988.85transcription termination factor MTERF2, chloroplastic OS=Cucumis melo OX=3656 G... [more]
A0A0A0LV846.5e-28486.98Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532380 PE=3 SV=1[more]
A0A5A7UZF14.7e-28285.25Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5D3BE492.0e-27276.36Transcription termination factor MTERF2 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A6J1GD599.2e-27082.24transcription termination factor MTERF2, chloroplastic OS=Cucurbita moschata OX=... [more]
BLAST of Clc03G00590 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G78930.11.7e-16753.66Mitochondrial transcription termination factor family protein [more]
AT4G38160.13.3e-3033.48Mitochondrial transcription termination factor family protein [more]
AT4G38160.23.3e-3033.48Mitochondrial transcription termination factor family protein [more]
AT4G38160.33.3e-3033.48Mitochondrial transcription termination factor family protein [more]
AT2G21710.12.9e-2625.48Mitochondrial transcription termination factor family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 476..507
e-value: 2.6E-4
score: 30.3
coord: 545..576
e-value: 1.2E-4
score: 31.5
coord: 512..544
e-value: 0.96
score: 18.5
coord: 440..471
e-value: 2.9E-6
score: 36.8
coord: 405..435
e-value: 1.3
score: 18.1
coord: 299..329
e-value: 55.0
score: 12.6
coord: 334..365
e-value: 2400.0
score: 0.9
coord: 263..294
e-value: 0.031
score: 23.5
coord: 370..400
e-value: 95.0
score: 11.9
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 286..591
e-value: 2.9E-89
score: 299.1
coord: 93..319
e-value: 6.6E-7
score: 28.6
IPR003690Transcription termination factor, mitochondrial/chloroplasticPANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 71..598
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10Transcription termination factor 3, mitochondrialcoord: 394..600
e-value: 3.7E-47
score: 162.7
NoneNo IPR availablePANTHERPTHR13068:SF3TRANSCRIPTION TERMINATION FACTOR 4, MITOCHONDRIALcoord: 71..598

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc03G00590.1Clc03G00590.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032502 developmental process
biological_process GO:0006353 DNA-templated transcription, termination
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0009507 chloroplast
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003690 double-stranded DNA binding