Clc02G25460 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G25460
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Protein FAM110A like
Location	ClcChr02: 37137116 .. 37138136 (+)
RNA-Seq Expression	Clc02G25460
Synteny	Clc02G25460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGTGTTGAATGAGTGGTGGAGGACACGTCTGGCTTTTGAATTCCCACAAGAAACTATATAAATTCAAATCCAAAAAGAAAGAAAAAAAATCCCCATAAAATGTTGCAAAGTCCTTTTCCATTTTTGGATCTTTCCTTCCGATTAATCGCATCCTCTTCTCTTTTCCCAGTTTTATCTGCTTCTTCCCCGTCCTTCAAGAACACCGCAATCCTCTTCTTTCTTCTTTGGATTCCCATTCCCCTGTTTCGTTAATGCACAGTGATCCAACACGCTTAATTTGACCAATCCGATTCAATCAATTATTTGACCTGTTCAACTCATTATGAATCAGAGCGTCATTCTCCGATCGCCGCCAGGGACTCGCCAGCAACCGCTACTCAGAGACAAGTCAGGAAACAGAGTTAAAGAAAAGCGGCGATTCGCGGAGGTGGCCGGCGGAACAGCGGCGGAGTGTGCGGCAATATGTTGTTGCTTTCCATGCAGCATGATGAATCTTCTGATATTGACGGTGTATAAAGTTCCGGTGGGACTCTGCAAGAAAGTGTGGAATAAGAGGGGAAAACGACGCCACATCGCAAAGAAAAACGCGGCGTCGGCGGGTACGGCGGGTGCGAGTGAAAGTAAAGAGTGGCGGAATGACAATCGGGAAAAGGAGGATCGGGGAGAATCGCTTCCGTCGTCGTATTTGCCATCGGAGGATATGGAATTGGAGAAGGAGATGTGGGAACGATTTTACGGAACAGGCTTCTGGAGAACACCATCTCAAAGAGAAACCTAATTCTACAAATTTGCCTTTTCTACCTTCAACATCAATACACCAACCAATTTTTTTAGGGTTCTATAATCCATGAACTTCTCATATTCAAATAAATCTGCTCTTTTTCCTTTTCCTCTCGAGTAAAATGTAAAGTCATTTTTATAGGTTATCACAAATTTTTAAAATGTAACGTTAGATGATTGGATTTGAACTTCTTTTCTATAGGTTTGCTATATTGATATAACTATTGAACTATATGGTT

mRNA sequence

AAAGTGTTGAATGAGTGGTGGAGGACACGTCTGGCTTTTGAATTCCCACAAGAAACTATATAAATTCAAATCCAAAAAGAAAGAAAAAAAATCCCCATAAAATGTTGCAAAGTCCTTTTCCATTTTTGGATCTTTCCTTCCGATTAATCGCATCCTCTTCTCTTTTCCCAGTTTTATCTGCTTCTTCCCCGTCCTTCAAGAACACCGCAATCCTCTTCTTTCTTCTTTGGATTCCCATTCCCCTGTTTCGTTAATGCACAGTGATCCAACACGCTTAATTTGACCAATCCGATTCAATCAATTATTTGACCTGTTCAACTCATTATGAATCAGAGCGTCATTCTCCGATCGCCGCCAGGGACTCGCCAGCAACCGCTACTCAGAGACAAGTCAGGAAACAGAGTTAAAGAAAAGCGGCGATTCGCGGAGGTGGCCGGCGGAACAGCGGCGGAGTGTGCGGCAATATGTTGTTGCTTTCCATGCAGCATGATGAATCTTCTGATATTGACGGTGTATAAAGTTCCGGTGGGACTCTGCAAGAAAGTGTGGAATAAGAGGGGAAAACGACGCCACATCGCAAAGAAAAACGCGGCGTCGGCGGGTACGGCGGGTGCGAGTGAAAGTAAAGAGTGGCGGAATGACAATCGGGAAAAGGAGGATCGGGGAGAATCGCTTCCGTCGTCGTATTTGCCATCGGAGGATATGGAATTGGAGAAGGAGATGTGGGAACGATTTTACGGAACAGGCTTCTGGAGAACACCATCTCAAAGAGAAACCTAATTCTACAAATTTGCCTTTTCTACCTTCAACATCAATACACCAACCAATTTTTTTAGGGTTCTATAATCCATGAACTTCTCATATTCAAATAAATCTGCTCTTTTTCCTTTTCCTCTCGAGTAAAATGTAAAGTCATTTTTATAGGTTATCACAAATTTTTAAAATGTAACGTTAGATGATTGGATTTGAACTTCTTTTCTATAGGTTTGCTATATTGATATAACTATTGAACTATATGGTT

Coding sequence (CDS)

ATGAATCAGAGCGTCATTCTCCGATCGCCGCCAGGGACTCGCCAGCAACCGCTACTCAGAGACAAGTCAGGAAACAGAGTTAAAGAAAAGCGGCGATTCGCGGAGGTGGCCGGCGGAACAGCGGCGGAGTGTGCGGCAATATGTTGTTGCTTTCCATGCAGCATGATGAATCTTCTGATATTGACGGTGTATAAAGTTCCGGTGGGACTCTGCAAGAAAGTGTGGAATAAGAGGGGAAAACGACGCCACATCGCAAAGAAAAACGCGGCGTCGGCGGGTACGGCGGGTGCGAGTGAAAGTAAAGAGTGGCGGAATGACAATCGGGAAAAGGAGGATCGGGGAGAATCGCTTCCGTCGTCGTATTTGCCATCGGAGGATATGGAATTGGAGAAGGAGATGTGGGAACGATTTTACGGAACAGGCTTCTGGAGAACACCATCTCAAAGAGAAACCTAA

Protein sequence

MNQSVILRSPPGTRQQPLLRDKSGNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKVWNKRGKRRHIAKKNAASAGTAGASESKEWRNDNREKEDRGESLPSSYLPSEDMELEKEMWERFYGTGFWRTPSQRET

Homology

[Close]

BLAST of Clc02G25460 vs. NCBI nr
Match: XP_038901895.1 (uncharacterized protein LOC120088573 [Benincasa hispida])

HSP 1 Score: 263.8 bits (673), Expect = 8.8e-67
Identity = 134/152 (88.16%), Postives = 138/152 (90.79%), Query Frame = 0


Query: 1   MNQSVILRSPPGTRQQPLLRDKSGNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLI 60
           MNQSV+L+SPPGTRQQPLLRDKSGNRVKEKRRFAEVAGGTAA CAAICCCFPCSMMNLLI
Sbjct: 1   MNQSVLLQSPPGTRQQPLLRDKSGNRVKEKRRFAEVAGGTAAGCAAICCCFPCSMMNLLI 60

Query: 61  LTVYKVPVGLCKKVWNKRGKRRHIAKKNAASAGTAGASESKEWRNDNREKEDRGE-SLPS 120
           LTVYKVPVGLCKKVWNKRGKRR IAKKNAA+         KEWRND+REKEDRGE SLPS
Sbjct: 61  LTVYKVPVGLCKKVWNKRGKRRQIAKKNAAA--------GKEWRNDDREKEDRGESSLPS 120

Query: 121 SYLPSEDMELEKEMWERFYGTGFWRTPSQRET 152
           SY  SEDMELEKEMWERFYGTGFWRTPSQRET
Sbjct: 121 SYFSSEDMELEKEMWERFYGTGFWRTPSQRET 144

[Close]

BLAST of Clc02G25460 vs. NCBI nr
Match: KAA0040078.1 (uncharacterized protein E6C27_scaffold366G00480 [Cucumis melo var. makuwa] >TYK21702.1 uncharacterized protein E5676_scaffold859G00690 [Cucumis melo var. makuwa])

HSP 1 Score: 257.3 bits (656), Expect = 8.2e-65
Identity = 131/151 (86.75%), Postives = 134/151 (88.74%), Query Frame = 0


Query: 1   MNQSVILRSPPGTRQQPLLRDKSGNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLI 60
           MNQ V+LRSPPGTRQQPLLRDKSGNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLI
Sbjct: 1   MNQGVLLRSPPGTRQQPLLRDKSGNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLI 60

Query: 61  LTVYKVPVGLCKKVWNKRGKRRHIAKKNAASAGTAGASESKEWRNDNREKEDRGESLPSS 120
           LTVYKVPVGLCKKVWNKRGKRR IAKKNA +         KEW ND+REKED GESLPSS
Sbjct: 61  LTVYKVPVGLCKKVWNKRGKRREIAKKNAGA-----VVGGKEWGNDDREKEDWGESLPSS 120

Query: 121 YLPSEDMELEKEMWERFYGTGFWRTPSQRET 152
           YL SEDMELEKEMWERFYG GF RTPSQRET
Sbjct: 121 YLSSEDMELEKEMWERFYGNGFLRTPSQRET 146

[Close]

BLAST of Clc02G25460 vs. NCBI nr
Match: XP_008449841.1 (PREDICTED: uncharacterized protein LOC103491601 [Cucumis melo])

HSP 1 Score: 254.2 bits (648), Expect = 7.0e-64
Identity = 130/151 (86.09%), Postives = 133/151 (88.08%), Query Frame = 0


Query: 1   MNQSVILRSPPGTRQQPLLRDKSGNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLI 60
           MNQ V+LRSPPGTRQQPLLRDKSGN VKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLI
Sbjct: 1   MNQGVLLRSPPGTRQQPLLRDKSGNIVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLI 60

Query: 61  LTVYKVPVGLCKKVWNKRGKRRHIAKKNAASAGTAGASESKEWRNDNREKEDRGESLPSS 120
           LTVYKVPVGLCKKVWNKRGKRR IAKKNA +         KEW ND+REKED GESLPSS
Sbjct: 61  LTVYKVPVGLCKKVWNKRGKRREIAKKNAGA-----VVGGKEWGNDDREKEDWGESLPSS 120

Query: 121 YLPSEDMELEKEMWERFYGTGFWRTPSQRET 152
           YL SEDMELEKEMWERFYG GF RTPSQRET
Sbjct: 121 YLSSEDMELEKEMWERFYGNGFLRTPSQRET 146

[Close]

BLAST of Clc02G25460 vs. NCBI nr
Match: KAE8649474.1 (hypothetical protein Csa_018184 [Cucumis sativus])

HSP 1 Score: 248.4 bits (633), Expect = 3.8e-62
Identity = 129/150 (86.00%), Postives = 133/150 (88.67%), Query Frame = 0


Query: 5   VILRSPPGTRQQPLLRDKSGNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLILTVY 64
           V+LRSPPGTRQQPLLRDKSGNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLILTVY
Sbjct: 560 VLLRSPPGTRQQPLLRDKSGNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLILTVY 619

Query: 65  KVPVGLCKKVWNKRGKRRHIAKKNAASAGTAGASESKEWR-NDN--REKEDRGESLPSSY 124
           KVPVGLCKKVWNKRGKRR IAKKNA + G       KEW  ND+   EKED GESLPSSY
Sbjct: 620 KVPVGLCKKVWNKRGKRREIAKKNAGAGG-------KEWAGNDDGGGEKEDWGESLPSSY 679

Query: 125 LPSEDMELEKEMWERFYGTGFWRTPSQRET 152
           L SED+ELEKEMWERFYGTGFWRTPSQRET
Sbjct: 680 LSSEDIELEKEMWERFYGTGFWRTPSQRET 702

[Close]

BLAST of Clc02G25460 vs. NCBI nr
Match: KAG6570325.1 (hypothetical protein SDJN03_29240, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010219.1 hypothetical protein SDJN02_27011, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 246.1 bits (627), Expect = 1.9e-61
Identity = 122/151 (80.79%), Postives = 132/151 (87.42%), Query Frame = 0


Query: 1   MNQSVILRSPPGTRQQPLLRDKSGNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLI 60
           MNQ+V+LRSPP TRQQPLL DKS NR+KEK RFAEVAGGTAAECAAICCCFPCSMMNLLI
Sbjct: 1   MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLI 60

Query: 61  LTVYKVPVGLCKKVWNKRGKRRHIAKKNAASAGTAGASESKEWRNDNREKEDRGESLPSS 120
           LTVYKVPVGLCKK WNKRGKRRHI K+N A+A   GA+  KE    + EKED GESLPSS
Sbjct: 61  LTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAAAGGATVGKEGPKHDGEKEDWGESLPSS 120

Query: 121 YLPSEDMELEKEMWERFYGTGFWRTPSQRET 152
           YL SED+ELEKEMW++FYGTGFWRTPSQRET
Sbjct: 121 YLSSEDVELEKEMWDQFYGTGFWRTPSQRET 151

[Close]

BLAST of Clc02G25460 vs. ExPASy TrEMBL
Match: A0A5D3DDP5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00690 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 4.0e-65
Identity = 131/151 (86.75%), Postives = 134/151 (88.74%), Query Frame = 0


Query: 1   MNQSVILRSPPGTRQQPLLRDKSGNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLI 60
           MNQ V+LRSPPGTRQQPLLRDKSGNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLI
Sbjct: 1   MNQGVLLRSPPGTRQQPLLRDKSGNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLI 60

Query: 61  LTVYKVPVGLCKKVWNKRGKRRHIAKKNAASAGTAGASESKEWRNDNREKEDRGESLPSS 120
           LTVYKVPVGLCKKVWNKRGKRR IAKKNA +         KEW ND+REKED GESLPSS
Sbjct: 61  LTVYKVPVGLCKKVWNKRGKRREIAKKNAGA-----VVGGKEWGNDDREKEDWGESLPSS 120

Query: 121 YLPSEDMELEKEMWERFYGTGFWRTPSQRET 152
           YL SEDMELEKEMWERFYG GF RTPSQRET
Sbjct: 121 YLSSEDMELEKEMWERFYGNGFLRTPSQRET 146

[Close]

BLAST of Clc02G25460 vs. ExPASy TrEMBL
Match: A0A0A0L1Q3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G279850 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.6e-64
Identity = 132/154 (85.71%), Postives = 136/154 (88.31%), Query Frame = 0


Query: 1   MNQSVILRSPPGTRQQPLLRDKSGNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLI 60
           MNQ V+LRSPPGTRQQPLLRDKSGNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLI
Sbjct: 1   MNQGVLLRSPPGTRQQPLLRDKSGNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLI 60

Query: 61  LTVYKVPVGLCKKVWNKRGKRRHIAKKNAASAGTAGASESKEWR-NDN--REKEDRGESL 120
           LTVYKVPVGLCKKVWNKRGKRR IAKKNA + G       KEW  ND+   EKED GESL
Sbjct: 61  LTVYKVPVGLCKKVWNKRGKRREIAKKNAGAGG-------KEWAGNDDGGGEKEDWGESL 120

Query: 121 PSSYLPSEDMELEKEMWERFYGTGFWRTPSQRET 152
           PSSYL SED+ELEKEMWERFYGTGFWRTPSQRET
Sbjct: 121 PSSYLSSEDIELEKEMWERFYGTGFWRTPSQRET 147

[Close]

BLAST of Clc02G25460 vs. ExPASy TrEMBL
Match: A0A1S3BMC5 (uncharacterized protein LOC103491601 OS=Cucumis melo OX=3656 GN=LOC103491601 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.4e-64
Identity = 130/151 (86.09%), Postives = 133/151 (88.08%), Query Frame = 0


Query: 1   MNQSVILRSPPGTRQQPLLRDKSGNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLI 60
           MNQ V+LRSPPGTRQQPLLRDKSGN VKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLI
Sbjct: 1   MNQGVLLRSPPGTRQQPLLRDKSGNIVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLI 60

Query: 61  LTVYKVPVGLCKKVWNKRGKRRHIAKKNAASAGTAGASESKEWRNDNREKEDRGESLPSS 120
           LTVYKVPVGLCKKVWNKRGKRR IAKKNA +         KEW ND+REKED GESLPSS
Sbjct: 61  LTVYKVPVGLCKKVWNKRGKRREIAKKNAGA-----VVGGKEWGNDDREKEDWGESLPSS 120

Query: 121 YLPSEDMELEKEMWERFYGTGFWRTPSQRET 152
           YL SEDMELEKEMWERFYG GF RTPSQRET
Sbjct: 121 YLSSEDMELEKEMWERFYGNGFLRTPSQRET 146

[Close]

BLAST of Clc02G25460 vs. ExPASy TrEMBL
Match: A0A6J1FTZ9 (uncharacterized protein LOC111448127 OS=Cucurbita moschata OX=3662 GN=LOC111448127 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 6.0e-61
Identity = 123/151 (81.46%), Postives = 133/151 (88.08%), Query Frame = 0


Query: 1   MNQSVILRSPPGTRQQPLLRDKSGNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLI 60
           MNQ+V+LRSPP TRQQPLL DKS NR+KEK RFAEVAGGTAAECAAICCCFPCSMMNLLI
Sbjct: 1   MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLI 60

Query: 61  LTVYKVPVGLCKKVWNKRGKRRHIAKKNAASAGTAGASESKEWRNDNREKEDRGESLPSS 120
           LTVYKVPVGLCKK WNKRGKRRHI K+N A+AG  GA+  KE    + EKED GESLPSS
Sbjct: 61  LTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAG--GATVGKEGPKHDGEKEDWGESLPSS 120

Query: 121 YLPSEDMELEKEMWERFYGTGFWRTPSQRET 152
           YL SED+ELEKEMW++FYGTGFWRTPSQRET
Sbjct: 121 YLSSEDVELEKEMWDQFYGTGFWRTPSQRET 149

[Close]

BLAST of Clc02G25460 vs. ExPASy TrEMBL
Match: A0A6J1JA30 (uncharacterized protein LOC111483938 OS=Cucurbita maxima OX=3661 GN=LOC111483938 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.0e-60
Identity = 122/153 (79.74%), Postives = 133/153 (86.93%), Query Frame = 0


Query: 1   MNQSVILRSPPGTRQQPLLRDKSGNRVKEKRRFAEVAGGTAAECAAICCCFPCSMMNLLI 60
           MNQ+V+LRSPP TRQQPLL DKS NR+KEK RFAE+AGGTAAECAAICCCFPCSMMNLLI
Sbjct: 1   MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAELAGGTAAECAAICCCFPCSMMNLLI 60

Query: 61  LTVYKVPVGLCKKVWNKRGKRRHIAKKN--AASAGTAGASESKEWRNDNREKEDRGESLP 120
           LTVYKVPVGLCKK WN+RGKRRHI KKN  AA+A   GA+  KE    + EKED GESLP
Sbjct: 61  LTVYKVPVGLCKKAWNRRGKRRHITKKNKAAAAATAGGATVGKEGPKHDGEKEDWGESLP 120

Query: 121 SSYLPSEDMELEKEMWERFYGTGFWRTPSQRET 152
           SSYL SED+ELEKEMW++FYGTGFWRTPSQRET
Sbjct: 121 SSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET 153

[Close]

BLAST of Clc02G25460 vs. TAIR 10
Match: AT2G27180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11690.1); Has 99 Blast hits to 99 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 105.9 bits (263), Expect = 2.9e-23
Identity = 65/161 (40.37%), Postives = 95/161 (59.01%), Query Frame = 0


Query: 1   MNQSVILRSP-PGTRQQPLLRDKSGNRV---KEKRRFAEVAGGTAAECAAICCCFPCSMM 60
           M + VIL+SP   + ++  +R+   +     KE+R+  EVAGG AAECAA+ CC PC+++
Sbjct: 1   MTRHVILKSPLLVSSEESTMRNSPPSTTSLSKERRKVGEVAGGAAAECAAVWCCCPCAVV 60

Query: 61  NLLILTVYKVPVGLCKKVWNKRGKRRHIAKKNAASAGTAGASESKEWRNDNREKEDR--- 120
           NL++L VYKVP  +CKK W +R KRR   +K      +A A  S+   +    +ED    
Sbjct: 61  NLMVLAVYKVPAAVCKKAW-RRSKRRRFTRKRHGLLASATAEGSESTVHARLNEEDLTAE 120

Query: 121 ---GESLPSSYLPSEDMELEKEMWERFYGTGFWRTPSQRET 152
               E   S    ++ + LE EM +RFYG GFWR+PSQ++T
Sbjct: 121 IVFEECHVSGGELNDVVRLENEMLDRFYGAGFWRSPSQKDT 160

[Close]

BLAST of Clc02G25460 vs. TAIR 10
Match: AT5G06380.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 91.3 bits (225), Expect = 7.3e-19
Identity = 54/126 (42.86%), Postives = 77/126 (61.11%), Query Frame = 0


Query: 34  AEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKVWNKRGKRRHIAKKNAASA- 93
           AE  GGT A CAA+C C PCS++NL++L VYK+P GLC++   +R +R+ +AKK    + 
Sbjct: 24  AECCGGTTASCAALCLCAPCSVVNLVVLAVYKLPRGLCRRA-IRRIRRKRLAKKEFVESG 83

Query: 94  ---GTAGASE----SKEWRNDNREKEDRGESLPSSYLPSEDMELEKEMWERFYGTGFWRT 152
              G  G+S+      E R++  E+E+  E++         + LEKEMW RFY  GFWR+
Sbjct: 84  REFGRGGSSQFAVHPLESRDEEEEEEEEDEAV---------IALEKEMWSRFYSGGFWRS 139

[Close]

BLAST of Clc02G25460 vs. TAIR 10
Match: AT3G11690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06380.1); Has 84 Blast hits to 84 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 87.0 bits (214), Expect = 1.4e-17
Identity = 52/148 (35.14%), Postives = 76/148 (51.35%), Query Frame = 0


Query: 34  AEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKVWNKRGKRRHIAKKNAASAG 93
           AE  GGT A CAA+ CC PC ++NLL+L +YKVP G+C++    R +++ +         
Sbjct: 55  AEFCGGTTASCAAVWCCCPCGLVNLLVLAIYKVPKGICRRAIRSRRRKQLVKNGILPPLP 114

Query: 94  TAGASESKEW-------------RNDNREKEDR---------GESLPSSYLPSED----- 152
           T G +E  +               +D  + ED          G+S+ + +   E+     
Sbjct: 115 TDGKNERMQRVFQNSEFAIHPLDSDDVSDDEDDDNFLDLKYIGKSVATGFTTEEETDEDD 174

The following BLAST results are available for this feature:

BLAST of Clc02G25460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901895.1	8.8e-67	88.16	uncharacterized protein LOC120088573 [Benincasa hispida]	[more]
KAA0040078.1	8.2e-65	86.75	uncharacterized protein E6C27_scaffold366G00480 [Cucumis melo var. makuwa] >TYK2...	[more]
XP_008449841.1	7.0e-64	86.09	PREDICTED: uncharacterized protein LOC103491601 [Cucumis melo]	[more]
KAE8649474.1	3.8e-62	86.00	hypothetical protein Csa_018184 [Cucumis sativus]	[more]
KAG6570325.1	1.9e-61	80.79	hypothetical protein SDJN03_29240, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Clc02G25460 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc02G25460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DDP5	4.0e-65	86.75	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0L1Q3	2.6e-64	85.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G279850 PE=4 SV=1	[more]
A0A1S3BMC5	3.4e-64	86.09	uncharacterized protein LOC103491601 OS=Cucumis melo OX=3656 GN=LOC103491601 PE=...	[more]
A0A6J1FTZ9	6.0e-61	81.46	uncharacterized protein LOC111448127 OS=Cucurbita moschata OX=3662 GN=LOC1114481...	[more]
A0A6J1JA30	3.0e-60	79.74	uncharacterized protein LOC111483938 OS=Cucurbita maxima OX=3661 GN=LOC111483938...	[more]

BLAST of Clc02G25460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27180.1	2.9e-23	40.37	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G06380.1	7.3e-19	42.86	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G11690.1	1.4e-17	35.14	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR33264:SF33	SUBFAMILY NOT NAMED	coord: 1..151
None	No IPR available	PANTHER	PTHR33264	EXPRESSED PROTEIN	coord: 1..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G25460.1	Clc02G25460.1	mRNA