Clc02G25270 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G25270
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	branchpoint-bridging protein isoform X2
Location	ClcChr02: 36960936 .. 36969243 (-)
RNA-Seq Expression	Clc02G25270
Synteny	Clc02G25270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGCCATTTCCCAGTGCACTTGCTTTGCTTATGTGCAGCAATTCTTCATTGTGCGTTCAATTCTGAAGAAGATAGCGGTTCAGGTACTTTCATTTTTCTTTCGCCTACTTTTTCTTTGGTTGTTGAGATGATTTGAGTATAGGAAAGAAGAAAATTAAAAAAAAAAAAAAAAGGACGTTAATCGTCAAATTCTTAACCCTCTTCACCCCTGTGCAACTACAAAATAAGCAACAAAGTTGTATTTTGCATCATCGTTTCTTTGTTAAGCTATGTAATTCCCACGGGAGCAACGAAATTTGAAGCAGTTTTTTTTTGTCTAATTTCGTTGTCTTTGAGACTAGCAGCTAAGATTTGCAATCTGGGGGGTGGAGGTGTTTTCTTGTAAATATAACATTTCCTAACTTCATGAATCACGACCAGAAACTATGGCGTTCTAGAGAATGTGTCAAATGTGATTGTAATATTTGACGTGCGATGTGGAAAAAACAGTTGTTCACTGTTAATCGAAGCACAGTTGAGTTTTTTTGCAGTGGTCATTTATGTTTCGACTGGTAAATAGGAAATTGCTGAAGTCTTGTTGTTTAAGTTTGCATTATATGCTGGAAATATCTGGGATTTTTTTGTATCCACTTGGGATCTGAGTTTTTGGCCTTCAAATAGTGAAAAAACTTTCCTGAGATGAATGATTATACATGATGGCTACGCGAAGTTACAACTTAGGTCAAGAAGAAGATAAAGAAGTCTCACTAAAAAAATTACAGAAATTGTATTAATTGTCAAGAATCAGAATAGAGGGAAACTAAAAAATATATATACAGTACAAAGATAAAAATGGATGTATAGAACGAACCAAGCTCCATATCCTTTTCCATGATCTCTTTACACCCAAAAAAAGTCCTGCCTACTTCTGTCGAACCAAAGAGTATGAAGTAGAAAAATAGAAGAAGAAGAAAGAAAGAAAGAAAAGAAACTTTTCAGCTCAATTCCTAAGGACTTCCTCAATACAATTATACAATACTGGAGATTCAAAAAAATGTTTTCGGTCATAGTACAACAATCAGGATGGAATCTAATGCCACCTTAATATTCTAGAAAAACCTCCCTCAAAGCTTCACTATGAAGAGGCATTCCAAACAAAAAAAAAAAAAAAGTGATAAAAACCCTCTAATGTAGTGCACCATGAATAATCCTATAATGCTTGTGCCATAGTTACAACAATGTGGCTCAGGAACCAAGGAGGAAAAACCTTTAAATGGGGTCAGTGTTGTTAATCCTCTGATGCGAGGTGCCAAGATAAAAAGCTACTCTTTGGGATTTTGACCATCAAGAACCACGCACTGTAGTGGGTGTGAGAACAAGAGACGAAAGTCAGAAGGTGGAAGATGAAAATTTTACACAAGAAAGTGCTTGAGGATTCAAGACTGAAAATGCCTATCCATAAATATTGGAACCAGATGAACTTCTTGGACAAGGGGAAAGAAGGATAATTTATTGGTGGCCTCCCTATTGGATATTGCTCTTATAAAATGAAAGTGATACAAAAGGGACTCACCAGTACAGAGCAAATCGAAGGGAGATTATAAAGGTGAGAAAAAAGCAAAAAAGGAGGCCATCTCTATTGAAGACTTACCTCAGCTTTATTAATGTTATGCTGAATCTATTATTTATCTAAAGTTGTCTTGGTACATTTGTAGACAAGGTCTAGTTAGACAGAGGGTTTAGTGAGTTTAGCTCAATGGTAATTGTCATGACCTTCTTTCCTAAAGGTCGATGGTTCAATCTCCCATTTCCTCAGTTGTTGTACTAAAAGAAGTTAGACAAAGGGTTTAAGATCATGTTTTATGTAATAGCTTAATGATAAAAATGTTGTACATCAATATATTTGTTTTTTCTAATATCCATGAGCGTTGGATATTGGAGTTGAAGGTGAACTTATGCAAATAGTTTGCTGCATAGAATTTGATTTCAAGAAGTGCCTTTTACTGACTCATTGTTTAATGAACAGAATATTCTTCCCGTAAAAAAGTTTGTGGTTAAGTTACCTCATTATATGTATTGATGTATCTGGCGTCATGTCTGATTTTTCCATGCCTTGATACCCCCTAGATATTTACCACATGCCATTCTGTGACCTGTTATAAAATATTATCATCCACAGGTTCATACGAGTTTTTTTTGTTTGTTTGATCTATTATTCAGGAATACTTTACACAGAGTGTAAAGGAAAATTTAAAGGTTATATGTACTCATTCATTTCTCATTTATGCTATATCATAGGTTTTTAAGTTGATTGGAGAACGGAATGAGTACAGAGGTTGAAAAGACATCTCATATTGAATCTAAAAATGTGAAGATGTCTGGAGCAACTATTTCTTCTGCTGCACCTGTGGGAAGCCAAAAGGTATCCATGTTTGCTGCAAAGACTGGGTTTGTTATACCAAAAAACAAACTTTCGGGGTCTTTGGTTCCCATCTTTCGAGTGAACAAAAAGTTGGGAGGGAATGAATCAGCTAATGGAGAAAATGATAAACAAACCCAAAGAAATACAAAGTGGGGTCCTGATTTAACACAAGATACTGCAGTCAGAAAGGGGAGGCTCATAGCTTATCAGGTATTTGTGGAGCTCTTTCTCTTTCCCACCCTGCACACTTTTTCATGTATCAGTGACATGTGTTAAAGTCACAACTCACAATCAATAGAACATGTGTATTTCCCCTTTCATCTTGTGTATTTTGGGAGCTTTTCAAGTGCCACACTTTACCATTACTGTAGGAGTTAGTTTATTTTATGTACTATCTGTGGGATAAATCCTTGCTCATATCTCAATCCTAAGCCTTTACTCTTCTAACCATCACTTTAACTTCTGATATTTAGGATGACGATCTGCATTATTAAGATCCCATGCAACAGTTCTTGCTTTAGGCTTTAGCATTAACTTAGTATTAAATATGCCAATAAACATGGCTGGTATGGTACCATTTATGGATTAGAAAAGGAAAGATTTTTAACTTTCTCTCTGAACGTTGTTTCTTTTTTCTTTTTCTTTTTTTCCTTAAAAAAAATCCTCTCTGAACAGATACTGCTTCCTTTTTTTAATTTCTGTTATTACTTTTCTTTTTTAATAGATGTTATTCTTTCAAAACCTTCTTTGACCTAGTTTCATTAAACAGTTGGATATTCTCAATTTTCTACCATTGGATTTCCAATTTTCATATCTGGTGCTAAAATGTCAGTGTCTTCTGTGTGACTGTTTCGCATGGAAGATTCCCATTCCAGGTGCTACTTAGTGACATAACTGCCTCTATGGTTATACATATTTTGAGCAGACTCGATTGGAACAAATCGTGGAACTCCTTAAGTCTGGAACTTTGGAGGTTCCAAAGACACAAGATTCAACATTAGAAGGTGAGAATGTACAGGATTGTTCCCCTGGACCCCAAGCGAATAATAGGGTAAGTTCAGAGCTCATTTTAAGAAAATAAGAACTATAAAAATGAACTGTCATTATTTTTGTATGATTTTGATGTATGCCTTCTTCTGAATATACAGATGCTGTACAATGAACTTTTGGAACTTGAAAAACGTGAAGTTATTGGTATGCTTAGTTACTGACTTGATTTTATTATGCCCTCAAATCGAATTTTTAAATGCTATCAATAGAATTTTTCTTGATGATACAGGTGAAATACTAAAACTGAATCCAAGTTATAAGGCCCCTCCTGATTATAGGCCCTTGTTGAAAGAGGACAGGTTACCTCTCCCGGTAAGATTGGTCTTGCATTAGTTTTCTTTTGTGGTTAATAACATCGAAGAAACTAGAAACATACTGACCTTTTATTTTATTCACTCTGTCCCTCAAGGAAACTAGAAACATATTAACCTTTTATTTTAATCACTCTATCCAATCACCCATATGTTATTTGTCTATCATATCTTTCCTTTTTTGCGCATAGGATGAGGCTCGGAAGGATATTTATTTTCTTTTTCTTCTGCTAAGGGAAAAGAAAATTTTCGCTTAGGAAATGAAAAAATTACTAGAAAGTAGCAGGAAGGATATCTAATTATAGTACTGTTATTCTTGTTTCCACAAGTCAATCATGATATTACAATATCCCCCTGGCCCCTATTCCTTGAGGATCATTCACTTGATTTTATAAAATGAAATCATGCTAGGAGATGTTTCCATTTAGCATCTAGTGAACTTATTAGATGTTAAAGTTAAACAAACCTTCCAAGGAGGTGCCGAAGGATTTGTACACATGACCTAGTAGTTATAATTGAGGACGTTTAATTATGATTCTCTACTTAAGTTTATTTCCAAGAACTTATTAAATGAACAAACTGCTGCAAAAAAAAAATTTGAATCACGCAATTGTATGTGTCTCTGACCTTTTTCAACAGTCTTGTAACTTTAGATCACTCTATTGAATGGTTATCAGATGTCCCTGCAGGGACCCCTTATTGAGCTTTCAGAAACAAGAAAATCTTGCAACAAGCATCTCTAAATTTCTCTATGGACGTTAAGTAACAAAAATTCTACCAGGCTTCTTTAAATCTCTCTATGCACGTTTCAAAACAAAATATCCATCAAGCAGAGACTGAATTGGATTGGCCCCCATATTTGATTTAGTAAACTTCATATTGTGCAACTTTTTAAGTTGCTAAAGTTCCTTGTACTTTTCATTCTTCTGCGACAATTTGATTTTCCATGAGACCTCTAGTCCCTTCCCTATCATACCACGCACCCTCCCTCATAATACCCATGTAGGCTCTTGACTCCTACCACGTTCTCTTTCATTCTCTACAACTGTTGTGCCCACAGATGTTAATATCCAAGTACTACCTCCATCCCCCTTCGAACAACTTTGATGAATGTAATGTATTATTTTATGAACTCAAATTGCAAAAAGAAATGACATTAGAAATAATTTGAATTAACAAAAAATTAGAAGCAAGACCTAGTCCTGCTAAAGGCAATTTTAAAAAAGAAGTAAAAGTAGAAGTTAAACCAATCGCTTTCAATGAATTTCTGAAATCCTTAAAATAATTTTGGATATTTGAAAAGTTTGTCTGAAAACAATTCCGAATCAACATCTTTATCATATCTTGGATAAAAACTTGATTTGTAGATGCTATTAGTTTGCTCAGGAAGGTCGATGGATGTCAAAGCTTGAACTTTCAGTCTGAATCTCAAATGAAAGAATAATACTTGCTCTCCATTTGGGTGGAAATCGCGTCCAAATTGTTAAGGGGGCAGGGGATAAAAGACAGTATGAGCTCACTTAATAATCTTCTCCAACGTGATAGTTTAAAGTGCTCCAGTACATTGGAGATTTTGCTCAGTCGTTCATTGAGTTCCCTCCGAGACCAGTTTAAGCTATTATTTCCCTAACCCTGCTGAATTTACCTTGTAGGTTAAAGAATATCCTGGTTTCAACTTTATTGGCTTAATATATGGCCCGAATGGTGAAAATCAAAAGCGATTAGAAAAGGTAAGAAAGTCATTTTAGGTTATGAGATGTACTAAATATTATCTTCCTTTTCATCAACTTTTAATAAATATGTTCATTTACCAAACATGTCAGGAAACTGGAGCCAAAATACGAATTTGTGGTATTAAAGCTGGGACTGGTGAAAAGGTGATTCCTTTGACTAAGAAAGTCATAACTATGGTCGATACCAGTTATGCACTGTCTGGCATGTCAACTTCGTTTTAATCTTTTCTTCTTACTGCAAAGTAAACTAAAACGACTCTTGGGAAATGACTTGTCCCCAAGAAGGAAAAATTTTCAAACTCTGCAATAGAGTATAGACCCTCGTTTCCCCTGCAAGTGGAATGCTGCCTTAATAGTAATAATATTATGTAGTATCTCTTATATTTTGAATCTTTGATACATATCCTTTTACTGACAGTTTCTTATATATATCCATTTCATATCAAATATATATGATATATATATTTGGAGTCTTTGATTATTAAATGTCCTTACATATACATGACCTTACTTGAACAAGATCTGTTCTATAGGTTATACAATTGGGTCCTTGAATTCTAAGAATGTCCTTACATATACCATGACTAATTTCAGAAGGTGGTTGCCTAAACAACATTTTGCTGCCAAATTTGATTGGAGCCCCTTTATATTTTGGTTTGAACTTTTTTTTTCCCTCGTATTCTTTCATGTTTGGCTTTTCATAACAAAGAAAACTAAAAAGAAAGAAGATTTGGCTGTCAAGAATCTACCTAAAAGTCTCTGTTACCTTTTCACTTGTTCAAACGTCCACTAGATTAACCTATGATGGTTAATTTTGGCTATAAGCGAGTATGTTTTTTGAGCATCTCTTTGTAAGTTTGAAGACGCCTCAAGGCTTTTCACTGGATATGGTTTATTTTGTTTATAAATGAGAGTCTGTTCTTTGAGAATCTCAATCTTTCCATAAGTTTGAAGGCACCTCATCGCTTTTTAATTTACCTATGGTTTGACTCTTTGTGTTCCCTACCCCTATTCTTACAGGACGAAATTAAACCAACTGATGTACACAGAATTCATAATGCTTATGAAGAGCTGTATGTTTACATGTCAGCTGATACATTTGATAAGATCGATGCTGCAATTTCTGTTATAGAACTCCTAATCACCTCAATATCGGTTAGTCAATTGCTTCAAGAAAAGAACTAATCTCCATGGTTTTCATCTAATTTGATATAATTTATGTTCATTATCTTTAACTCCTTGACTTCTTCTCACAGGGAAATCTGGCCACTGGTTCCACATCGTCTGATTTTTTGTCTACGGAGGAAAGTTCTTGCAGCCGAGCTGAGGGTACTATAGTCTCAGATATGGGGCAGACTCCTATGCCGAACCAGGGGGTTATGCAACAAGGGCAAGTTTACACGCCAACTTCATTGCAAGGGCAGTTTCATTACCCTAATACTTGGCCTTCTCACAATTTGACGCCATCTCCTGGATTTATTTCTCCACAAAATCCTCCGCCATCAATTATAAACAATCCAATCCATTTGTCAACACCCAGTTCAAACATTTCTAATGTACCATCATCATTTGTGCGTCCACCTGCTACGGTTGCTTTCAATCCAGCTTTCCGAGGCCCTCCTGTTCCTCCTCCCAGACAACAGTTACATGCACAAGACTTACAGCAACCTTTCATGACTCAACCTAGCCATGTTAGCCAACCCAGACTTCATGCTTTGACGATTCAACGGCCCTCATTGGTTCCACCTAATGTCTCAAATCCAAACTTCAATGGTAGTGGTCAATTACCTTCAGGACTACTCCCGAATATGCCAGGATCATCTTTGCCTCAACTTGTTCCCAGTAGCATTCCTCCAGGATCACGGCCTGATTTTTCTGGACCCGCAGCTGGCAGTTCAGCGTCTATGGGTGCAAATAATATGGGACAGATGGCTCTATCACTTCCCCGACCCTTTGCGCCTCGTGCAGCTCCACCGCTGGGTGTAAATTCTTCTGGCGCAGTACCCACAAATACAGCAGTAGCCAATGTGGATGGATATGCATCTTTTCCTTCTGGACCATCCACTCCCCAAGCAAAAGGTATAAACACAAATCACCCTAATACAGCTCCAATTCCGTCACACCAGATGGGGCATCGCCCACCATTTTCAGTGCCTTCAGCAATGTTACCCTCACCAGCACATAATCCTCAAGGTAACTTCATTGCTGGATCTGCTTCAACCCCTCCTACACCACCTACCAATACAAGCAATTTTACATTCCAACCACGTGGCCCACAAAACGCATCTCCTCAAACAATCTTGAATTTAAACATTCAAAACACACCAACCGTACCTACATTGCAACAGCCTGCTTCTGGTGCACCATCTTTCCATCCAGCAGCCCCAAATTTTCCGAGAATTGCCAATCAACCCTTTCACGGACCCCAAGCTGTCAGCCAGATAGGTACTCATCAAATTCAAGAGATAGCTTCGAATCCTATTGGCATGCTGGTCTCAACTAGAATTCCTGCTTTCCTTGATCCAGGTCCTCGAACACAACTGCATCAGAGAAACTTGGGTCCAGGAATGCAAATGCCAAACTTGCCAGGCAATTTTCCTCATAGACAAGGAAACCCCATGCAATCTGAACAAGGTTTCCCCATGCGGGCACCTCGACCTGAAGTCCGCTTTGCTCCCCCACAGTACAGTAGCAATCTGACATTTGTTTCTGGTAAGCCACCTCCCAGTTCCGGAGGGCAGCAAATTTATGATCCATTCTCGCCTACATCTGTTTCTGGCCCACCACAGCAGGGGAGCAATCCGCTTAGATGA

mRNA sequence

AAGCCATTTCCCAGTGCACTTGCTTTGCTTATGTGCAGCAATTCTTCATTGTGCGTTCAATTCTGAAGAAGATAGCGGTTCAGGTTTTTAAGTTGATTGGAGAACGGAATGAGTACAGAGGTTGAAAAGACATCTCATATTGAATCTAAAAATGTGAAGATGTCTGGAGCAACTATTTCTTCTGCTGCACCTGTGGGAAGCCAAAAGGTATCCATGTTTGCTGCAAAGACTGGGTTTGTTATACCAAAAAACAAACTTTCGGGGTCTTTGGTTCCCATCTTTCGAGTGAACAAAAAGTTGGGAGGGAATGAATCAGCTAATGGAGAAAATGATAAACAAACCCAAAGAAATACAAAGTGGGGTCCTGATTTAACACAAGATACTGCAGTCAGAAAGGGGAGGCTCATAGCTTATCAGACTCGATTGGAACAAATCGTGGAACTCCTTAAGTCTGGAACTTTGGAGGTTCCAAAGACACAAGATTCAACATTAGAAGGTGAGAATGTACAGGATTGTTCCCCTGGACCCCAAGCGAATAATAGGATGCTGTACAATGAACTTTTGGAACTTGAAAAACGTGAAGTTATTGGTGAAATACTAAAACTGAATCCAAGTTATAAGGCCCCTCCTGATTATAGGCCCTTGTTGAAAGAGGACAGGTTACCTCTCCCGTTTAAAGTGCTCCAGTACATTGGAGATTTTGCTCAGTCGTTCATTGAGTTCCCTCCGAGACCAGTTAAAGAATATCCTGGTTTCAACTTTATTGGCTTAATATATGGCCCGAATGGTGAAAATCAAAAGCGATTAGAAAAGGAAACTGGAGCCAAAATACGAATTTGTGGTATTAAAGCTGGGACTGGTGAAAAGGTGATTCCTTTGACTAAGAAAGTCATAACTATGGACGAAATTAAACCAACTGATGTACACAGAATTCATAATGCTTATGAAGAGCTGTATGTTTACATGTCAGCTGATACATTTGATAAGATCGATGCTGCAATTTCTGTTATAGAACTCCTAATCACCTCAATATCGGGAAATCTGGCCACTGGTTCCACATCGTCTGATTTTTTGTCTACGGAGGAAAGTTCTTGCAGCCGAGCTGAGGGTACTATAGTCTCAGATATGGGGCAGACTCCTATGCCGAACCAGGGGGTTATGCAACAAGGGCAAGTTTACACGCCAACTTCATTGCAAGGGCAGTTTCATTACCCTAATACTTGGCCTTCTCACAATTTGACGCCATCTCCTGGATTTATTTCTCCACAAAATCCTCCGCCATCAATTATAAACAATCCAATCCATTTGTCAACACCCAGTTCAAACATTTCTAATGTACCATCATCATTTGTGCGTCCACCTGCTACGGTTGCTTTCAATCCAGCTTTCCGAGGCCCTCCTGTTCCTCCTCCCAGACAACAGTTACATGCACAAGACTTACAGCAACCTTTCATGACTCAACCTAGCCATGTTAGCCAACCCAGACTTCATGCTTTGACGATTCAACGGCCCTCATTGGTTCCACCTAATGTCTCAAATCCAAACTTCAATGGTAGTGGTCAATTACCTTCAGGACTACTCCCGAATATGCCAGGATCATCTTTGCCTCAACTTGTTCCCAGTAGCATTCCTCCAGGATCACGGCCTGATTTTTCTGGACCCGCAGCTGGCAGTTCAGCGTCTATGGGTGCAAATAATATGGGACAGATGGCTCTATCACTTCCCCGACCCTTTGCGCCTCGTGCAGCTCCACCGCTGGGTGTAAATTCTTCTGGCGCAGTACCCACAAATACAGCAGTAGCCAATGTGGATGGATATGCATCTTTTCCTTCTGGACCATCCACTCCCCAAGCAAAAGGTATAAACACAAATCACCCTAATACAGCTCCAATTCCGTCACACCAGATGGGGCATCGCCCACCATTTTCAGTGCCTTCAGCAATGTTACCCTCACCAGCACATAATCCTCAAGGTAACTTCATTGCTGGATCTGCTTCAACCCCTCCTACACCACCTACCAATACAAGCAATTTTACATTCCAACCACGTGGCCCACAAAACGCATCTCCTCAAACAATCTTGAATTTAAACATTCAAAACACACCAACCGTACCTACATTGCAACAGCCTGCTTCTGGTGCACCATCTTTCCATCCAGCAGCCCCAAATTTTCCGAGAATTGCCAATCAACCCTTTCACGGACCCCAAGCTGTCAGCCAGATAGGTACTCATCAAATTCAAGAGATAGCTTCGAATCCTATTGGCATGCTGGTCTCAACTAGAATTCCTGCTTTCCTTGATCCAGGTCCTCGAACACAACTGCATCAGAGAAACTTGGGTCCAGGAATGCAAATGCCAAACTTGCCAGGCAATTTTCCTCATAGACAAGGAAACCCCATGCAATCTGAACAAGGTTTCCCCATGCGGGCACCTCGACCTGAAGTCCGCTTTGCTCCCCCACAGTACAGTAGCAATCTGACATTTGTTTCTGGTAAGCCACCTCCCAGTTCCGGAGGGCAGCAAATTTATGATCCATTCTCGCCTACATCTGTTTCTGGCCCACCACAGCAGGGGAGCAATCCGCTTAGATGA

Coding sequence (CDS)

ATGAGTACAGAGGTTGAAAAGACATCTCATATTGAATCTAAAAATGTGAAGATGTCTGGAGCAACTATTTCTTCTGCTGCACCTGTGGGAAGCCAAAAGGTATCCATGTTTGCTGCAAAGACTGGGTTTGTTATACCAAAAAACAAACTTTCGGGGTCTTTGGTTCCCATCTTTCGAGTGAACAAAAAGTTGGGAGGGAATGAATCAGCTAATGGAGAAAATGATAAACAAACCCAAAGAAATACAAAGTGGGGTCCTGATTTAACACAAGATACTGCAGTCAGAAAGGGGAGGCTCATAGCTTATCAGACTCGATTGGAACAAATCGTGGAACTCCTTAAGTCTGGAACTTTGGAGGTTCCAAAGACACAAGATTCAACATTAGAAGGTGAGAATGTACAGGATTGTTCCCCTGGACCCCAAGCGAATAATAGGATGCTGTACAATGAACTTTTGGAACTTGAAAAACGTGAAGTTATTGGTGAAATACTAAAACTGAATCCAAGTTATAAGGCCCCTCCTGATTATAGGCCCTTGTTGAAAGAGGACAGGTTACCTCTCCCGTTTAAAGTGCTCCAGTACATTGGAGATTTTGCTCAGTCGTTCATTGAGTTCCCTCCGAGACCAGTTAAAGAATATCCTGGTTTCAACTTTATTGGCTTAATATATGGCCCGAATGGTGAAAATCAAAAGCGATTAGAAAAGGAAACTGGAGCCAAAATACGAATTTGTGGTATTAAAGCTGGGACTGGTGAAAAGGTGATTCCTTTGACTAAGAAAGTCATAACTATGGACGAAATTAAACCAACTGATGTACACAGAATTCATAATGCTTATGAAGAGCTGTATGTTTACATGTCAGCTGATACATTTGATAAGATCGATGCTGCAATTTCTGTTATAGAACTCCTAATCACCTCAATATCGGGAAATCTGGCCACTGGTTCCACATCGTCTGATTTTTTGTCTACGGAGGAAAGTTCTTGCAGCCGAGCTGAGGGTACTATAGTCTCAGATATGGGGCAGACTCCTATGCCGAACCAGGGGGTTATGCAACAAGGGCAAGTTTACACGCCAACTTCATTGCAAGGGCAGTTTCATTACCCTAATACTTGGCCTTCTCACAATTTGACGCCATCTCCTGGATTTATTTCTCCACAAAATCCTCCGCCATCAATTATAAACAATCCAATCCATTTGTCAACACCCAGTTCAAACATTTCTAATGTACCATCATCATTTGTGCGTCCACCTGCTACGGTTGCTTTCAATCCAGCTTTCCGAGGCCCTCCTGTTCCTCCTCCCAGACAACAGTTACATGCACAAGACTTACAGCAACCTTTCATGACTCAACCTAGCCATGTTAGCCAACCCAGACTTCATGCTTTGACGATTCAACGGCCCTCATTGGTTCCACCTAATGTCTCAAATCCAAACTTCAATGGTAGTGGTCAATTACCTTCAGGACTACTCCCGAATATGCCAGGATCATCTTTGCCTCAACTTGTTCCCAGTAGCATTCCTCCAGGATCACGGCCTGATTTTTCTGGACCCGCAGCTGGCAGTTCAGCGTCTATGGGTGCAAATAATATGGGACAGATGGCTCTATCACTTCCCCGACCCTTTGCGCCTCGTGCAGCTCCACCGCTGGGTGTAAATTCTTCTGGCGCAGTACCCACAAATACAGCAGTAGCCAATGTGGATGGATATGCATCTTTTCCTTCTGGACCATCCACTCCCCAAGCAAAAGGTATAAACACAAATCACCCTAATACAGCTCCAATTCCGTCACACCAGATGGGGCATCGCCCACCATTTTCAGTGCCTTCAGCAATGTTACCCTCACCAGCACATAATCCTCAAGGTAACTTCATTGCTGGATCTGCTTCAACCCCTCCTACACCACCTACCAATACAAGCAATTTTACATTCCAACCACGTGGCCCACAAAACGCATCTCCTCAAACAATCTTGAATTTAAACATTCAAAACACACCAACCGTACCTACATTGCAACAGCCTGCTTCTGGTGCACCATCTTTCCATCCAGCAGCCCCAAATTTTCCGAGAATTGCCAATCAACCCTTTCACGGACCCCAAGCTGTCAGCCAGATAGGTACTCATCAAATTCAAGAGATAGCTTCGAATCCTATTGGCATGCTGGTCTCAACTAGAATTCCTGCTTTCCTTGATCCAGGTCCTCGAACACAACTGCATCAGAGAAACTTGGGTCCAGGAATGCAAATGCCAAACTTGCCAGGCAATTTTCCTCATAGACAAGGAAACCCCATGCAATCTGAACAAGGTTTCCCCATGCGGGCACCTCGACCTGAAGTCCGCTTTGCTCCCCCACAGTACAGTAGCAATCTGACATTTGTTTCTGGTAAGCCACCTCCCAGTTCCGGAGGGCAGCAAATTTATGATCCATTCTCGCCTACATCTGTTTCTGGCCCACCACAGCAGGGGAGCAATCCGCTTAGATGA

Protein sequence

MSTEVEKTSHIESKNVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRVNKKLGGNESANGENDKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIVELLKSGTLEVPKTQDSTLEGENVQDCSPGPQANNRMLYNELLELEKREVIGEILKLNPSYKAPPDYRPLLKEDRLPLPFKVLQYIGDFAQSFIEFPPRPVKEYPGFNFIGLIYGPNGENQKRLEKETGAKIRICGIKAGTGEKVIPLTKKVITMDEIKPTDVHRIHNAYEELYVYMSADTFDKIDAAISVIELLITSISGNLATGSTSSDFLSTEESSCSRAEGTIVSDMGQTPMPNQGVMQQGQVYTPTSLQGQFHYPNTWPSHNLTPSPGFISPQNPPPSIINNPIHLSTPSSNISNVPSSFVRPPATVAFNPAFRGPPVPPPRQQLHAQDLQQPFMTQPSHVSQPRLHALTIQRPSLVPPNVSNPNFNGSGQLPSGLLPNMPGSSLPQLVPSSIPPGSRPDFSGPAAGSSASMGANNMGQMALSLPRPFAPRAAPPLGVNSSGAVPTNTAVANVDGYASFPSGPSTPQAKGINTNHPNTAPIPSHQMGHRPPFSVPSAMLPSPAHNPQGNFIAGSASTPPTPPTNTSNFTFQPRGPQNASPQTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFPRIANQPFHGPQAVSQIGTHQIQEIASNPIGMLVSTRIPAFLDPGPRTQLHQRNLGPGMQMPNLPGNFPHRQGNPMQSEQGFPMRAPRPEVRFAPPQYSSNLTFVSGKPPPSSGGQQIYDPFSPTSVSGPPQQGSNPLR

Homology

[Close]

BLAST of Clc02G25270 vs. NCBI nr
Match: XP_038901344.1 (branchpoint-bridging protein isoform X1 [Benincasa hispida])

HSP 1 Score: 1322.0 bits (3420), Expect = 0.0e+00
Identity = 701/836 (83.85%), Postives = 725/836 (86.72%), Query Frame = 0


Query: 1   MSTEVEKTSHIESKNVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MS EVEKTSHIESKN KMSG  I SAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKTSHIESKNAKMSGVNICSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNESANGENDKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIVELLKSGTLEV 120
           NK+ GGNESANGENDKQTQRNTKWGPDLTQD AVRKGRLIAYQTRLEQI+E LKSGTLEV
Sbjct: 61  NKRSGGNESANGENDKQTQRNTKWGPDLTQDAAVRKGRLIAYQTRLEQIMEHLKSGTLEV 120

Query: 121 PKTQDSTLEGENVQDCSPGPQANNRMLYNELLELEKREVIGEILKLNPSYKAPPDYRPLL 180
           PKTQDS L GENV+D SPG QA N+M YNELLELEKREVIGEILKLNPSYKAPPDYRPL+
Sbjct: 121 PKTQDSAL-GENVEDNSPGRQAKNQMPYNELLELEKREVIGEILKLNPSYKAPPDYRPLM 180

Query: 181 KEDRLPLPFKVLQYIGDFAQSFIEFPPRPVKEYPGFNFIGLIYGPNGENQKRLEKETGAK 240
           KEDRLPL                     PVKEYPGFNFIGLIYGP+GENQKRLEKETGAK
Sbjct: 181 KEDRLPL---------------------PVKEYPGFNFIGLIYGPSGENQKRLEKETGAK 240

Query: 241 IRICGIKAGTGEKVIPLTKKVITMDEIKPTDVHRIHNAYEELYVYMSADTFDKIDAAISV 300
           IRICGIKAGTGEK           DEIKPTDVH I N YEELYVYMSADTFDKIDAAISV
Sbjct: 241 IRICGIKAGTGEK-----------DEIKPTDVHGIQNVYEELYVYMSADTFDKIDAAISV 300

Query: 301 IELLITSISGNLATGSTSSDFLSTEESSCSRAEGTIVSDMGQTPMPNQGVMQQGQVYTPT 360
           IELLITSISGNLATGS  SD +ST+ SSCSRAEGT VSDMGQ    NQGV QQ QVY PT
Sbjct: 301 IELLITSISGNLATGSALSDLVSTDGSSCSRAEGTTVSDMGQ----NQGVTQQRQVYAPT 360

Query: 361 SLQGQFHYPNTWPSHNLTPSPGFISPQNPPPSIINNPIHLSTPSSNISNVPSSFVRPPAT 420
           S+QGQFHYP+TWPSHNLTP+PGFISPQNPP SIINNPIHLSTP+SN+SNVPSSF RPPA 
Sbjct: 361 SVQGQFHYPSTWPSHNLTPAPGFISPQNPPSSIINNPIHLSTPTSNVSNVPSSFARPPAP 420

Query: 421 VAFNPAFRGPPVPPPRQQLHAQDLQQPFMTQPSHVSQPRLHALTIQRPSLVPPNVSNPNF 480
           VAFNPAFRGPPVPPPRQQLH QDLQQPFMTQ SHV QPR+HALTIQ+PSLVP NVSNPNF
Sbjct: 421 VAFNPAFRGPPVPPPRQQLHVQDLQQPFMTQTSHVGQPRVHALTIQQPSLVPSNVSNPNF 480

Query: 481 NGSGQLPSGLLPNMPGSSLPQLVPSSIPPGSRPD-----------FSGPAAGSSASMGAN 540
           +GSG LPSGLLPNMPGSSLP LVPSSIPPGSRPD           FSGP  GSSASMGAN
Sbjct: 481 SGSGPLPSGLLPNMPGSSLPHLVPSSIPPGSRPDRPLAPSIVSTGFSGPTIGSSASMGAN 540

Query: 541 NMGQMALSLPRPFAPRAAPPLGVNSSGAVPTNTAVANVDGYASFPSGPSTPQAKGINTNH 600
           NMGQMA SLP PF PRAAPPLGV SSGA P NTAVANVDGYASFPSGPSTPQA GINTNH
Sbjct: 541 NMGQMASSLPPPFGPRAAPPLGVISSGAAPANTAVANVDGYASFPSGPSTPQATGINTNH 600

Query: 601 PNTAPIPSHQMGHRPPFSVPSAMLPSPAHNPQGNFIAGSASTPPTPPTNTSNFTFQPRGP 660
           PNTAP+PS QMG RPPFSVPSA+LPSPAHNP GNFIAGSASTPPTPPTNTSNFTFQPRGP
Sbjct: 601 PNTAPLPSPQMGLRPPFSVPSALLPSPAHNPPGNFIAGSASTPPTPPTNTSNFTFQPRGP 660

Query: 661 QNASPQTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFPRIANQPFHGPQAVSQIGTHQ 720
           QN S QTILNLNIQNTPTVPTLQQPASGA SFHP AP+FPR+ANQPF GPQA SQIGTHQ
Sbjct: 661 QNPS-QTILNLNIQNTPTVPTLQQPASGALSFHPPAPHFPRVANQPFPGPQAGSQIGTHQ 720

Query: 721 IQEIASNPIGMLVSTRIPAFLDPGPRTQLHQRNLGPGMQM--PNLPGNFPHRQGNPMQSE 780
           +QEIASNPIGM VSTRIPAFLDPGPRTQLHQRN GPG+QM  P LPGNFP R GNPMQ E
Sbjct: 721 MQEIASNPIGMQVSTRIPAFLDPGPRTQLHQRNFGPGLQMQIPKLPGNFPQRPGNPMQFE 780

Query: 781 QGFPMRAPRPEVRFAPPQYSSNLTFVSGKPPPSSGGQQIYDPFSPTSVSGPPQQGS 824
           QGFPMRAPRPE+RF PPQY SNLTFVSGKPP SSGGQQIYDPFSPTSVSGP QQG+
Sbjct: 781 QGFPMRAPRPELRFTPPQYRSNLTFVSGKPPSSSGGQQIYDPFSPTSVSGPQQQGT 798

[Close]

BLAST of Clc02G25270 vs. NCBI nr
Match: XP_004142248.1 (branchpoint-bridging protein isoform X1 [Cucumis sativus])

HSP 1 Score: 1309.3 bits (3387), Expect = 0.0e+00
Identity = 692/832 (83.17%), Postives = 719/832 (86.42%), Query Frame = 0


Query: 1   MSTEVEKTSHIESKNVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MS EVEKTSHIESKNVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKTSHIESKNVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNE-SANGENDKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIVELLKSGTLE 120
           NKKLGGNE SANGENDKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQI+ELLKSGTLE
Sbjct: 61  NKKLGGNESSANGENDKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIMELLKSGTLE 120

Query: 121 VPKTQDSTLEGENVQDCSPGPQANNRMLYNELLELEKREVIGEILKLNPSYKAPPDYRPL 180
           VPKTQDSTLE ENV+D SPG QANN+  YNELLELEKREVIGEILKLNPSYKAPPDYRPL
Sbjct: 121 VPKTQDSTLECENVEDNSPGSQANNKTSYNELLELEKREVIGEILKLNPSYKAPPDYRPL 180

Query: 181 LKEDRLPLPFKVLQYIGDFAQSFIEFPPRPVKEYPGFNFIGLIYGPNGENQKRLEKETGA 240
           LKEDRLPL                     PVKEYPGFNFIGLIYGP+GENQKRLEKETGA
Sbjct: 181 LKEDRLPL---------------------PVKEYPGFNFIGLIYGPSGENQKRLEKETGA 240

Query: 241 KIRICGIKAGTGEKVIPLTKKVITMDEIKPTDVHRIHNAYEELYVYMSADTFDKIDAAIS 300
           KIRICG+KAGTGEK           DEIKPTDVH I N YEELYVYMSADTFDKIDAAIS
Sbjct: 241 KIRICGVKAGTGEK-----------DEIKPTDVHGIQNTYEELYVYMSADTFDKIDAAIS 300

Query: 301 VIELLITSISGNLATGSTSSDFLSTEESSCSRAEGTIVSDMGQTPMPNQGVMQQGQVYTP 360
           VIELLITSISGNLATGST SD +STEESS S+A+GT VSDMGQ PMPNQGVMQQGQ Y P
Sbjct: 301 VIELLITSISGNLATGSTLSDLVSTEESSSSQADGTTVSDMGQNPMPNQGVMQQGQFYGP 360

Query: 361 TSLQGQFHYPNTWPSHNLTPSPGFISPQNPPPSIINNPIHLSTPSSNISNVPSSFVRPPA 420
            S+ GQFHYP+TWPSHNLTP+PGFISPQNPP SIINNPIHLSTPSSN+ NVPS F  PPA
Sbjct: 361 PSVPGQFHYPSTWPSHNLTPAPGFISPQNPPSSIINNPIHLSTPSSNVPNVPSLFAHPPA 420

Query: 421 TVAFNPAFRGPPVPPPRQQLHAQDLQQPFMTQPSHVSQPRLHALTIQR-PSLVPPNVSNP 480
            V+FNPAFRGPPVPPPRQQLHAQD+QQPFM Q SHV QPRLHAL  QR PSLVP NVS P
Sbjct: 421 PVSFNPAFRGPPVPPPRQQLHAQDVQQPFMAQTSHVGQPRLHALPHQRLPSLVPSNVSKP 480

Query: 481 NFNGSGQLPSGLLPNMPGSSLPQLVPSSIPPGSRPD--FSGPAAGSSASMGANNMGQMAL 540
           NF  SG LPSGLLPNM GSSLPQLVPSS PPGSRPD   +    GSS SMGANNMGQMA 
Sbjct: 481 NFTSSGPLPSGLLPNMAGSSLPQLVPSSFPPGSRPDHPLAPNIVGSSVSMGANNMGQMAP 540

Query: 541 SLPRPFAPRAAPPLGVNSSGAVPTNTAVANVDGYASFPSGPSTPQAKGINTNHPNTAPIP 600
           SLP PF PRAAPP G+N SGA P +TA ANVDGYASFPSGPSTPQA GIN NH NTAPIP
Sbjct: 541 SLPPPFGPRAAPPQGLNISGAAPADTAAANVDGYASFPSGPSTPQATGINVNHHNTAPIP 600

Query: 601 SHQMGHRPPFSVPSAMLPSPAHNPQGNFIAGSASTPPTPPTNTSNFTFQPRGPQNASPQT 660
           SHQMGHRPPFSVPSA+LPSPAHNP GNFI GSAS PPTPPTNTSNFTFQPRGPQN SPQT
Sbjct: 601 SHQMGHRPPFSVPSALLPSPAHNPPGNFIGGSASNPPTPPTNTSNFTFQPRGPQNPSPQT 660

Query: 661 ILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFPRIANQPFHGPQAVSQIGTHQIQEIASN 720
           ILNLNIQNTPT PTLQQPASGAPSFHP+APNF R+ANQPF GPQA SQIGTHQIQ+IASN
Sbjct: 661 ILNLNIQNTPTGPTLQQPASGAPSFHPSAPNFLRVANQPFPGPQAGSQIGTHQIQDIASN 720

Query: 721 PIGMLVSTRIPAFLDPGPRTQLHQRNLGPGMQMPNLPGNFPHRQGNPMQSEQGFPMRAPR 780
           PIG+ VSTRIPAFL+PGPRTQLHQRN GPG QMPNLPGNFPHR G  +Q EQ F MR  +
Sbjct: 721 PIGIQVSTRIPAFLNPGPRTQLHQRNFGPGFQMPNLPGNFPHRPGTSIQFEQDFHMRPRQ 780

Query: 781 PEVRFAPPQYSSNLTFVSGK-PPPSSGGQQIYDPFSPTSVSGPPQQGSNPLR 828
           PE+RF PPQYSSNLTFVSGK  PPSSGGQQ+YDPFSPTSVSGP  QGSNPLR
Sbjct: 781 PELRFTPPQYSSNLTFVSGKLLPPSSGGQQVYDPFSPTSVSGPQHQGSNPLR 800

[Close]

BLAST of Clc02G25270 vs. NCBI nr
Match: XP_008449795.1 (PREDICTED: splicing factor 1 isoform X1 [Cucumis melo] >TYK21680.1 splicing factor 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1305.4 bits (3377), Expect = 0.0e+00
Identity = 687/832 (82.57%), Postives = 722/832 (86.78%), Query Frame = 0


Query: 1   MSTEVEKTSHIESKNVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MS EVEKTSHIESKNVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKTSHIESKNVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNE-SANGENDKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIVELLKSGTLE 120
           NKKLGGNE SANGENDKQTQRNTKWGPDLTQDTA+RKGRLIAYQTRLEQI+ELLKSGTLE
Sbjct: 61  NKKLGGNESSANGENDKQTQRNTKWGPDLTQDTAIRKGRLIAYQTRLEQIMELLKSGTLE 120

Query: 121 VPKTQDSTLEGENVQDCSPGPQANNRMLYNELLELEKREVIGEILKLNPSYKAPPDYRPL 180
           V KTQDSTLEGENV+D SPG QAN++M YNELLELEKREVIGEILKLNPSYKAPPDYRPL
Sbjct: 121 VSKTQDSTLEGENVEDNSPGSQANSKMSYNELLELEKREVIGEILKLNPSYKAPPDYRPL 180

Query: 181 LKEDRLPLPFKVLQYIGDFAQSFIEFPPRPVKEYPGFNFIGLIYGPNGENQKRLEKETGA 240
           LKEDRLPL                     PVKEYPGFNFIGLIYGP+GENQKRLEKETGA
Sbjct: 181 LKEDRLPL---------------------PVKEYPGFNFIGLIYGPSGENQKRLEKETGA 240

Query: 241 KIRICGIKAGTGEKVIPLTKKVITMDEIKPTDVHRIHNAYEELYVYMSADTFDKIDAAIS 300
           KIRICG+KAGTGEK           DEIKPTDVH + N YEELYVYMSADTFDKIDAAIS
Sbjct: 241 KIRICGVKAGTGEK-----------DEIKPTDVHGVQNTYEELYVYMSADTFDKIDAAIS 300

Query: 301 VIELLITSISGNLATGSTSSDFLSTEESSCSRAEGTIVSDMGQTPMPNQGVMQQGQVYTP 360
           VIELLITSISGNLATGST SD +STEESS  +AEGT VSDMGQ PMPNQGVMQQGQVY P
Sbjct: 301 VIELLITSISGNLATGSTMSDLVSTEESSSRQAEGTAVSDMGQNPMPNQGVMQQGQVYGP 360

Query: 361 TSLQGQFHYPNTWPSHNLTPSPGFISPQNPPPSIINNPIHLSTPSSNISNVPSSFVRPPA 420
            S+ GQFHYP+TWPSHNLTP+P FISP NPP SIINNPIHLSTPSSN+ NVP SF RPPA
Sbjct: 361 PSVPGQFHYPSTWPSHNLTPAPEFISPHNPPSSIINNPIHLSTPSSNVPNVPLSFARPPA 420

Query: 421 TVAFNPAFRGPPVPPPRQQLHAQDLQQPFMTQPSHVSQPRLHALTIQR-PSLVPPNVSNP 480
            VAFNPAFRGPPVPPPRQQLHAQDLQQPF++Q +HV QPRLHAL++Q+ PSLVP NVS P
Sbjct: 421 PVAFNPAFRGPPVPPPRQQLHAQDLQQPFISQTNHVGQPRLHALSLQQLPSLVPSNVSKP 480

Query: 481 NFNGSGQLPSGLLPNMPGSSLPQLVPSSIPPGSRPD--FSGPAAGSSASMGANNMGQMAL 540
           NF GSG LPSGLLPN  GSSLPQL+PS++PPGSRPD   +    GSS SMGANNMGQMA 
Sbjct: 481 NFTGSGPLPSGLLPNTSGSSLPQLLPSNVPPGSRPDRPLTPSIVGSSVSMGANNMGQMAP 540

Query: 541 SLPRPFAPRAAPPLGVNSSGAVPTNTAVANVDGYASFPSGPSTPQAK-GINTNHPNTAPI 600
           SLP PF PRA PP GVN SGA P +TA AN+DGYASFPSGPSTPQA  GINTNHPNTAPI
Sbjct: 541 SLPLPFGPRAVPPQGVNISGAAPADTAAANMDGYASFPSGPSTPQATGGINTNHPNTAPI 600

Query: 601 PSHQMGHRPPFSVPSAMLPSPAHNPQGNFIAGSASTPPTPPTNTSNFTFQPRGPQNASPQ 660
           PSHQMGHRPPFSVPSA+LPS AHNP GNFI GSAS PPTPPTNTSNFTFQPRGPQN SPQ
Sbjct: 601 PSHQMGHRPPFSVPSALLPSSAHNPPGNFIGGSASNPPTPPTNTSNFTFQPRGPQNPSPQ 660

Query: 661 TILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFPRIANQPFHGPQAVSQIGTHQIQEIAS 720
           T LNLNIQNTPT  TLQQPASGAPSFHP+APNF R+ANQPF GPQA SQIGTHQIQ+IAS
Sbjct: 661 TNLNLNIQNTPTGLTLQQPASGAPSFHPSAPNFLRVANQPFPGPQAGSQIGTHQIQDIAS 720

Query: 721 NPIGMLVSTRIPAFLDPGPRTQLHQRNLGPGMQMPNLPGNFPHRQGNPMQSEQGFPMRAP 780
           NPIG+ VSTRIPAFLDPGPRTQLHQRN GPG+QMPNLPGNFPHR G  +Q EQ F MRA 
Sbjct: 721 NPIGIQVSTRIPAFLDPGPRTQLHQRNFGPGLQMPNLPGNFPHRPGTSIQFEQEFHMRAR 780

Query: 781 RPEVRFAPPQYSSNLTFVSGKPPPSSGGQQIYDPFSPTSVSGPPQQGSNPLR 828
           RPE+RF PP YSSNLTFVSGK PPSSGGQQ+YDPFSPTSVSGP  QGSNPLR
Sbjct: 781 RPELRFTPPLYSSNLTFVSGKLPPSSGGQQVYDPFSPTSVSGPQHQGSNPLR 800

[Close]

BLAST of Clc02G25270 vs. NCBI nr
Match: KAA0040057.1 (splicing factor 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1300.8 bits (3365), Expect = 0.0e+00
Identity = 687/833 (82.47%), Postives = 722/833 (86.67%), Query Frame = 0


Query: 1   MSTEVEKTSHIESKNVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MS EVEKTSHIESKNVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKTSHIESKNVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNE-SANGENDKQTQRNTKWGPDLTQDTAVRKGRLIAY-QTRLEQIVELLKSGTL 120
           NKKLGGNE SANGENDKQTQRNTKWGPDLTQDTA+RKGRLIAY QTRLEQI+ELLKSGTL
Sbjct: 61  NKKLGGNESSANGENDKQTQRNTKWGPDLTQDTAIRKGRLIAYQQTRLEQIMELLKSGTL 120

Query: 121 EVPKTQDSTLEGENVQDCSPGPQANNRMLYNELLELEKREVIGEILKLNPSYKAPPDYRP 180
           EV KTQDSTLEGENV+D SPG QAN++M YNELLELEKREVIGEILKLNPSYKAPPDYRP
Sbjct: 121 EVSKTQDSTLEGENVEDNSPGSQANSKMSYNELLELEKREVIGEILKLNPSYKAPPDYRP 180

Query: 181 LLKEDRLPLPFKVLQYIGDFAQSFIEFPPRPVKEYPGFNFIGLIYGPNGENQKRLEKETG 240
           LLKEDRLPL                     PVKEYPGFNFIGLIYGP+GENQKRLEKETG
Sbjct: 181 LLKEDRLPL---------------------PVKEYPGFNFIGLIYGPSGENQKRLEKETG 240

Query: 241 AKIRICGIKAGTGEKVIPLTKKVITMDEIKPTDVHRIHNAYEELYVYMSADTFDKIDAAI 300
           AKIRICG+KAGTGEK           DEIKPTDVH + N YEELYVYMSADTFDKIDAAI
Sbjct: 241 AKIRICGVKAGTGEK-----------DEIKPTDVHGVQNTYEELYVYMSADTFDKIDAAI 300

Query: 301 SVIELLITSISGNLATGSTSSDFLSTEESSCSRAEGTIVSDMGQTPMPNQGVMQQGQVYT 360
           SVIELLITSISGNLATGST SD +STEESS  +AEGT VSDMGQ PMPNQGVMQQGQVY 
Sbjct: 301 SVIELLITSISGNLATGSTMSDLVSTEESSSRQAEGTAVSDMGQNPMPNQGVMQQGQVYG 360

Query: 361 PTSLQGQFHYPNTWPSHNLTPSPGFISPQNPPPSIINNPIHLSTPSSNISNVPSSFVRPP 420
           P S+ GQFHYP+TWPSHNLTP+P FISP NPP SIINNPIHLSTPSSN+ NVP SF RPP
Sbjct: 361 PPSVPGQFHYPSTWPSHNLTPAPEFISPHNPPSSIINNPIHLSTPSSNVPNVPLSFARPP 420

Query: 421 ATVAFNPAFRGPPVPPPRQQLHAQDLQQPFMTQPSHVSQPRLHALTIQR-PSLVPPNVSN 480
           A VAFNPAFRGPPVPPPRQQLHAQDLQQPF++Q +HV QPRLHAL++Q+ PSLVP NVS 
Sbjct: 421 APVAFNPAFRGPPVPPPRQQLHAQDLQQPFISQTNHVGQPRLHALSLQQLPSLVPSNVSK 480

Query: 481 PNFNGSGQLPSGLLPNMPGSSLPQLVPSSIPPGSRPD--FSGPAAGSSASMGANNMGQMA 540
           PNF GSG LPSGLLPN  GSSLPQL+PS++PPGSRPD   +    GSS SMGANNMGQMA
Sbjct: 481 PNFTGSGPLPSGLLPNTSGSSLPQLLPSNVPPGSRPDRPLTPSIVGSSVSMGANNMGQMA 540

Query: 541 LSLPRPFAPRAAPPLGVNSSGAVPTNTAVANVDGYASFPSGPSTPQAK-GINTNHPNTAP 600
            SLP PF PRA PP GVN SGA P +TA AN+DGYASFPSGPSTPQA  GINTNHPNTAP
Sbjct: 541 PSLPLPFGPRAVPPQGVNISGAAPADTAAANMDGYASFPSGPSTPQATGGINTNHPNTAP 600

Query: 601 IPSHQMGHRPPFSVPSAMLPSPAHNPQGNFIAGSASTPPTPPTNTSNFTFQPRGPQNASP 660
           IPSHQMGHRPPFSVPSA+LPS AHNP GNFI GSAS PPTPPTNTSNFTFQPRGPQN SP
Sbjct: 601 IPSHQMGHRPPFSVPSALLPSSAHNPPGNFIGGSASNPPTPPTNTSNFTFQPRGPQNPSP 660

Query: 661 QTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFPRIANQPFHGPQAVSQIGTHQIQEIA 720
           QT LNLNIQNTPT  TLQQPASGAPSFHP+APNF R+ANQPF GPQA SQIGTHQIQ+IA
Sbjct: 661 QTNLNLNIQNTPTGLTLQQPASGAPSFHPSAPNFLRVANQPFPGPQAGSQIGTHQIQDIA 720

Query: 721 SNPIGMLVSTRIPAFLDPGPRTQLHQRNLGPGMQMPNLPGNFPHRQGNPMQSEQGFPMRA 780
           SNPIG+ VSTRIPAFLDPGPRTQLHQRN GPG+QMPNLPGNFPHR G  +Q EQ F MRA
Sbjct: 721 SNPIGIQVSTRIPAFLDPGPRTQLHQRNFGPGLQMPNLPGNFPHRPGTSIQFEQEFHMRA 780

Query: 781 PRPEVRFAPPQYSSNLTFVSGKPPPSSGGQQIYDPFSPTSVSGPPQQGSNPLR 828
            RPE+RF PP YSSNLTFVSGK PPSSGGQQ+YDPFSPTSVSGP  QGSNPLR
Sbjct: 781 RRPELRFTPPLYSSNLTFVSGKLPPSSGGQQVYDPFSPTSVSGPQHQGSNPLR 801

[Close]

BLAST of Clc02G25270 vs. NCBI nr
Match: XP_011653559.1 (branchpoint-bridging protein isoform X2 [Cucumis sativus] >KGN54081.1 hypothetical protein Csa_018047 [Cucumis sativus])

HSP 1 Score: 1247.6 bits (3227), Expect = 0.0e+00
Identity = 669/832 (80.41%), Postives = 693/832 (83.29%), Query Frame = 0


Query: 1   MSTEVEKTSHIESKNVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MS EVEKTSHIESKNVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKTSHIESKNVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNE-SANGENDKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIVELLKSGTLE 120
           NKKLGGNE SANGENDKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQI+ELLKSGTLE
Sbjct: 61  NKKLGGNESSANGENDKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIMELLKSGTLE 120

Query: 121 VPKTQDSTLEGENVQDCSPGPQANNRMLYNELLELEKREVIGEILKLNPSYKAPPDYRPL 180
           VPKTQDSTLE ENV+D SPG QANN+  YNELLELEKREVIGEILKLNPSYKAPPDYRPL
Sbjct: 121 VPKTQDSTLECENVEDNSPGSQANNKTSYNELLELEKREVIGEILKLNPSYKAPPDYRPL 180

Query: 181 LKEDRLPLPFKVLQYIGDFAQSFIEFPPRPVKEYPGFNFIGLIYGPNGENQKRLEKETGA 240
           LKEDRLPL                     PVKEYPGFNFIGLIYGP+GENQKRLEKETGA
Sbjct: 181 LKEDRLPL---------------------PVKEYPGFNFIGLIYGPSGENQKRLEKETGA 240

Query: 241 KIRICGIKAGTGEKVIPLTKKVITMDEIKPTDVHRIHNAYEELYVYMSADTFDKIDAAIS 300
           KIRICG+KAGTGEK           DEIKPTDVH I N YEELYVYMSADTFDKIDAAIS
Sbjct: 241 KIRICGVKAGTGEK-----------DEIKPTDVHGIQNTYEELYVYMSADTFDKIDAAIS 300

Query: 301 VIELLITSISGNLATGSTSSDFLSTEESSCSRAEGTIVSDMGQTPMPNQGVMQQGQVYTP 360
           VIELLITSISGNLATGST SD +STEESS S+A+GT VSDMGQ PMPNQGVMQQGQ Y P
Sbjct: 301 VIELLITSISGNLATGSTLSDLVSTEESSSSQADGTTVSDMGQNPMPNQGVMQQGQFYGP 360

Query: 361 TSLQGQFHYPNTWPSHNLTPSPGFISPQNPPPSIINNPIHLSTPSSNISNVPSSFVRPPA 420
            S+ GQFHYP+TWPSHNLTP+PGFISPQNPP SIINNPIHLSTPSSN+ NVPS F  PPA
Sbjct: 361 PSVPGQFHYPSTWPSHNLTPAPGFISPQNPPSSIINNPIHLSTPSSNVPNVPSLFAHPPA 420

Query: 421 TVAFNPAFRGPPVPPPRQQLHAQDLQQPFMTQPSHVSQPRLHALTIQR-PSLVPPNVSNP 480
            V+FNPAFRGPPVPPPRQQLHAQD+QQPFM Q SHV QPRLHAL  QR PSLVP NVS P
Sbjct: 421 PVSFNPAFRGPPVPPPRQQLHAQDVQQPFMAQTSHVGQPRLHALPHQRLPSLVPSNVSKP 480

Query: 481 NFNGSGQLPSGLLPNMPGSSLPQLVPSSIPPGSRPD--FSGPAAGSSASMGANNMGQMAL 540
           NF  SG LPSGLLPNM GSSLPQLVPSS PPGSRPD   +    GSS SMGANNMGQMA 
Sbjct: 481 NFTSSGPLPSGLLPNMAGSSLPQLVPSSFPPGSRPDHPLAPNIVGSSVSMGANNMGQMAP 540

Query: 541 SLPRPFAPRAAPPLGVNSSGAVPTNTAVANVDGYASFPSGPSTPQAKGINTNHPNTAPIP 600
           SLP PF PRAAPP G+N SGA P +TA ANVDGYASFPSGPSTPQA GIN NH NTAPIP
Sbjct: 541 SLPPPFGPRAAPPQGLNISGAAPADTAAANVDGYASFPSGPSTPQATGINVNHHNTAPIP 600

Query: 601 SHQMGHRPPFSVPSAMLPSPAHNPQGNFIAGSASTPPTPPTNTSNFTFQPRGPQNASPQT 660
           SHQMGHRPPFSVPSA+LPSPAHNP GNFI GSAS PPTPPTNTSNFTFQPRGPQN SPQT
Sbjct: 601 SHQMGHRPPFSVPSALLPSPAHNPPGNFIGGSASNPPTPPTNTSNFTFQPRGPQNPSPQT 660

Query: 661 ILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFPRIANQPFHGPQAVSQIGTHQIQEIASN 720
           ILNLNIQNTPT PTLQQPASGAPSFHP+APNF R+ANQPF GPQA SQI           
Sbjct: 661 ILNLNIQNTPTGPTLQQPASGAPSFHPSAPNFLRVANQPFPGPQAGSQI----------- 720

Query: 721 PIGMLVSTRIPAFLDPGPRTQLHQRNLGPGMQMPNLPGNFPHRQGNPMQSEQGFPMRAPR 780
                           GPRTQLHQRN GPG QMPNLPGNFPHR G  +Q EQ F MR  +
Sbjct: 721 ----------------GPRTQLHQRNFGPGFQMPNLPGNFPHRPGTSIQFEQDFHMRPRQ 773

Query: 781 PEVRFAPPQYSSNLTFVSGK-PPPSSGGQQIYDPFSPTSVSGPPQQGSNPLR 828
           PE+RF PPQYSSNLTFVSGK  PPSSGGQQ+YDPFSPTSVSGP  QGSNPLR
Sbjct: 781 PELRFTPPQYSSNLTFVSGKLLPPSSGGQQVYDPFSPTSVSGPQHQGSNPLR 773

[Close]

BLAST of Clc02G25270 vs. ExPASy Swiss-Prot
Match: Q54BM5 (Branchpoint-bridging protein OS=Dictyostelium discoideum OX=44689 GN=sf1 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 4.9e-13
Identity = 62/203 (30.54%), Postives = 99/203 (48.77%), Query Frame = 0


Query: 105 RLEQIVELLKSGTLEVPKTQDSTLEGENVQDCSPGPQANNR-MLYNELLELEKREVIGEI 164
           R+++I + +  G +E  +              + G ++N R     E L+ E+ +++   
Sbjct: 100 RVDEITKKITIGPIEFTERDRERSPSPPPTYDNNGKRSNTREQRIKEKLQKERHQLVVTA 159

Query: 165 LKLNPSYKAPPDYRPLLKEDRLPLPFKVLQYIGDFAQSFIEFPPRPVKEYPGFNFIGLIY 224
            ++NP+YK P DY+P  ++    +      YI             P+K +P +NFIGLI 
Sbjct: 160 QQINPTYKPPSDYQPPNEKKTRKI------YI-------------PIKNHPEYNFIGLII 219

Query: 225 GPNGENQKRLEKETGAKIRICGIKAGTGEKVIPLTKKVITMDEIKPTDVHRIHNAYEELY 284
           GP G  QKR+EKE+GAKI I G   G+               + KPT +    N  +EL+
Sbjct: 220 GPRGNTQKRMEKESGAKIAIRG--KGSSR-------------DGKPTKLQFQEN--DELH 266

Query: 285 VYMSADTFDKID-AAISVIELLI 306
           V ++ADT D++D A + V E LI
Sbjct: 280 VLLTADTVDQLDKAEVLVREFLI 266

[Close]

BLAST of Clc02G25270 vs. ExPASy Swiss-Prot
Match: Q750X2 (Branchpoint-bridging protein OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=BBP PE=3 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 2.1e-08
Identity = 127/507 (25.05%), Postives = 195/507 (38.46%), Query Frame = 0


Query: 92  TAVRKGRLIAYQT--RLEQIVELLKSGTLEVPKTQDSTLEGENVQDCSPGPQANNR-MLY 151
           +A+ + +  AYQ   R+++I   L++  L  P ++  +L    V D S G + N R   Y
Sbjct: 57  SALTQEQQTAYQVMYRIQEITIKLRTNDLNPPTSRYRSLSPPPVYD-SQGKRTNTREHRY 116

Query: 152 NELLELEKREVIGEILKLNPSYKAPPDYRPLLKEDRLPLPFKVLQYIGDFAQSFIEFPPR 211
            + LE E+  ++   LK+ P + AP DY       R P  F+   YI             
Sbjct: 117 RKKLEEERHRLVEIALKMIPHFIAPDDY-------RRPSKFQDKYYI------------- 176

Query: 212 PVKEYPGFNFIGLIYGPNGENQKRLEKETGAKIRICGI-KAGTGEKVIPLTKKVITMDEI 271
           P+ +YP  NF+GL+ GP G   K+L++++G KI I G      G+    L K  + M+  
Sbjct: 177 PINDYPEINFVGLLLGPRGNTLKQLQQQSGCKIVIRGRGSVKEGKAATDLPKGAMNMN-- 236

Query: 272 KPTDVHRIHNAYEELYVYMSADTFDKIDAAISVIELLITSISGNLATGSTSSDFLSTEES 331
                       E L+  +SADT +KI   I+ +E +I      + +    +D    +  
Sbjct: 237 ------------EPLHCVISADTEEKIPLGINAVESIIIKA---ITSPEGQNDLKRGQLR 296

Query: 332 SCSRAEGTIVSDMGQTPMPNQGVMQQGQVYTPTSLQ-----------GQFHYPNTWPSHN 391
             +   GT+  D    P+  +   ++ +  +  SL            G      T P + 
Sbjct: 297 ELAVLNGTLREDNRPCPLCGEQGHKKWECSSNPSLSMTVICQRCNQPGHAARDCTSPLNE 356

Query: 392 L----TPSPGF-----ISPQNPPPSIINNPI--HLSTPSSNISN--VPSSFVRPPATVAF 451
                +  P F     +    PPPS    P+  H S P S  +N  V  + + PP T+A 
Sbjct: 357 FGKRTSDGPEFRETKKLQQDAPPPS---GPVGSHPSAPGSGSANSGVAPASLHPPGTMA- 416

Query: 452 NPAFRGPPVPPPRQQLHAQDLQQPFMTQPSHVSQPRLHALTIQRPSLVPPNVSNPNFNGS 511
                 P   PP   L A     P    P+  +           P  +PP V+ P     
Sbjct: 417 -----PPGALPPPGSLAAPGTLPPPAALPAPAA-----------PGTLPPPVALP---AP 476

Query: 512 GQLPSGLLPNMPGSSL----------PQLVPSSIPPGSRPDFSGPAAGSSASM-----GA 550
             LP   +P  P +S           P   P + PP  +   +  +AGSS S       A
Sbjct: 477 ATLPQAGVPPAPDASPAVKTAVPIEGPPAPPQTAPPLRQTAATASSAGSSQSAQEEPENA 502

[Close]

BLAST of Clc02G25270 vs. ExPASy Swiss-Prot
Match: Q64213 (Splicing factor 1 OS=Mus musculus OX=10090 GN=Sf1 PE=1 SV=6)

HSP 1 Score: 58.2 bits (139), Expect = 5.3e-07
Identity = 142/614 (23.13%), Postives = 216/614 (35.18%), Query Frame = 0


Query: 86  PDLTQDTAVRKGRLIAYQTRLEQIVELLKSGTLEVPKTQDSTLEGENVQDCSPGPQANNR 145
           P LT++    + R    Q ++E +   L++G L +P   +           S G + N R
Sbjct: 42  PGLTRE----QERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTR 101

Query: 146 -MLYNELLELEKREVIGEILKLNPSYKAPPDYRPLLKEDRLPLPFKVLQYIGDFAQSFIE 205
                + LE E+  +I E++ LNP +K P DY+P        +  KV+            
Sbjct: 102 EFRTRKKLEEERHTLITEMVALNPDFKPPADYKP----PATRVSDKVM------------ 161

Query: 206 FPPRPVKEYPGFNFIGLIYGPNGENQKRLEKETGAKIRICGIKAGTGEKVIPLTKKVITM 265
               P  EYP  NF+GL+ GP G   K +EKE  AKI I G             K  +  
Sbjct: 162 ---IPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRG-------------KGSVKE 221

Query: 266 DEIKPTDVHRIHNAYEELYVYMSADTFDKIDAAISVIELLITSISGNLATGSTSSDFLST 325
            ++   D   +    E L+  ++A+T + +  A+  I  ++      + T    +D    
Sbjct: 222 GKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQ---GIETPEDQNDLRKM 281

Query: 326 EESSCSRAEGTIVSDMGQTPMPNQGVMQQGQVYTP--TSLQGQFHYPNTWPSHNLTPSPG 385
           +    +R  GT+  D  +   P Q    +    T   T   G  H  +          PG
Sbjct: 282 QLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQR----PG 341

Query: 386 FISPQNPPPSIINNPIHLSTPSSNISNVPSSFVRPPATVAFNPAFRGPPVPPPRQQLHAQ 445
              PQ+       +  +LS   + +   P      PA+V                     
Sbjct: 342 --DPQSAQDKARMDKEYLSL-MAELGEAP-----VPASVG-------------------- 401

Query: 446 DLQQPFMTQPSHVSQPRLHALTIQRPSLVPPNVSNPNFNGSGQLPSGLLPNMPGSSLPQL 505
               P  T  +   +P   A     PSL+    S P +  SG  PS    N P   +   
Sbjct: 402 STSGPATTPLASAPRPAAPASNPPPPSLMSTTQSRPPWMNSG--PS---ENRPYHGMHGG 461

Query: 506 VPSSIPPGSRPDFSGPAAGSSASMGANNMGQMALSLPRPFAPRAAPPLGVNSSGAVPTNT 565
            P   P G    F  P    +   G + M       P P+     PP+  N     P + 
Sbjct: 462 GPGG-PGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPM--NQGPHPPGHH 521

Query: 566 AVANVDGYASFPSGPSTPQAKGINTNHPNTAPIPSHQMGHR-PPFSVPSAMLPSPAHNPQ 625
               +D Y       STP   G+   H     +P   MG   PP   PS   P P   P 
Sbjct: 522 GPPPMDQYLG-----STPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPL 564

Query: 626 GNFIAGSASTPPTPPTNTSNFTFQPRGPQNASPQTILNLNIQNTPTVPTLQQPASGAPSF 685
             +       PP PP ++S  +  P   Q  +  T  +    + P  P  QQ A+ A   
Sbjct: 582 PPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIP--PWQQQQAAAA--- 564

Query: 686 HPAAPNFPRIANQP 696
             A+P  P++   P
Sbjct: 642 --ASPGTPQMQGNP 564

[Close]

BLAST of Clc02G25270 vs. ExPASy Swiss-Prot
Match: O74555 (Branchpoint-bridging protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=bpb1 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 2.2e-05
Identity = 150/667 (22.49%), Postives = 251/667 (37.63%), Query Frame = 0


Query: 15  NVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRVNKKLGGNESANGEN 74
           N +  G+T S+  P+G ++          +   N +S      ++ N ++  +   +G +
Sbjct: 3   NSRSVGSTGSNNTPLGRRRFDEKPDSLPPLPDANGMSNGYRDSYKSNSRM--DHRPDGYH 62

Query: 75  D---KQTQRNTKWG----------PDLTQDTAVR------KGRLIAYQTRLEQIVELLKS 134
           D   ++  R   WG            +  +TAV+      +  L +   RLE+I + L++
Sbjct: 63  DGRGRRAYRKHYWGHPTPIEEMLPSQMELETAVKSCMTMEQLELYSLNVRLEEITQKLRT 122

Query: 135 GTLEVPKTQDSTLEGENVQDCSPGPQANN--------RMLYNELLELEKREVIGEILKLN 194
           G + VP  ++        +  SP PQ +N         + Y + LE E+  +I   +K+ 
Sbjct: 123 GDV-VPHHRE--------RSPSPPPQYDNHGRRLNTREIRYKKKLEDERHRIIERAMKMV 182

Query: 195 PSYKAPPDY-RPLLKEDRLPLPFKVLQYIGDFAQSFIEFPPRPVKEYPGFNFIGLIYGPN 254
           P ++AP DY RP   ++++        Y+             PVK+YP  NFIGL+ GP 
Sbjct: 183 PGFRAPSDYRRPAKTQEKV--------YV-------------PVKDYPEINFIGLLIGPR 242

Query: 255 GENQKRLEKETGAKIRICG---IKAGTGEKVIPLTKKVITMDEIKPTDVHRIHNAYEELY 314
           G   K +E ++GAKI I G   +K G G                  +D     N  E+L+
Sbjct: 243 GHTLKDMEAKSGAKIAIRGKGSVKEGKGR-----------------SDPSVRGNMEEDLH 302

Query: 315 VYMSADTFDKIDAAISVIELLITSISGNLATGSTSSDFLSTEESSCSRAEGTIVSDMGQT 374
             ++AD+ DKI+ AI +I+ +I + +   +     +D    +    +   GT+  D  Q 
Sbjct: 303 CLVTADSEDKINHAIKLIDNVIQTAA---SVPEGQNDLKRNQLRQLATLNGTLRDDENQV 362

Query: 375 PMPNQGVMQQGQVYTPTSLQGQF-----------HYPNTWPSHNLTP------------- 434
              N G +   +   P  +               H     P  +  P             
Sbjct: 363 -CQNCGNVGHRRFDCPERINHTMNIVCRHCGSIGHIARDCPVRDQQPPMADSTADREYQS 422

Query: 435 -------------------------SPGFISPQ--NPPPSIINNPIHLSTPSSNISNVPS 494
                                      G  SPQ  +PPP         ST  S+ ++ P+
Sbjct: 423 LMQELGGGSAISNGNGEPQKSIEFSESGAASPQAGHPPPWAA-----ASTSVSSSTSSPA 482

Query: 495 SFVRPPATVAFNPAFRGPPVPPPRQQLHAQDLQQPFMTQPSHVSQPRLHALTIQRPSLVP 554
            + +P ++ A       P  P P QQ  A          PS  S P     T Q+ ++ P
Sbjct: 483 PWAKPASSAA-------PSNPAPWQQPAAPQSAPALSMNPS--SLPPWQQPT-QQSAVQP 542

Query: 555 PNVSNPNFNGSGQLPSGLLPNMPGSSLPQLVPSSIPPGSRPDFSGPAAGSSASMGANNMG 598
            N+          +PS   P +PG+S P      +PP +   F+ P        GA  M 
Sbjct: 543 SNL----------VPSQNAPFIPGTSAP------LPPTT---FAPPGVPLPPIPGAPGMP 582

[Close]

BLAST of Clc02G25270 vs. ExPASy Swiss-Prot
Match: Q15637 (Splicing factor 1 OS=Homo sapiens OX=9606 GN=SF1 PE=1 SV=4)

HSP 1 Score: 50.4 bits (119), Expect = 1.1e-04
Identity = 143/648 (22.07%), Postives = 220/648 (33.95%), Query Frame = 0


Query: 86  PDLTQDTAVRKGRLIAYQTRLEQIVELLKSGTLEVPKTQDSTLEGENVQDCSPGPQANNR 145
           P LT++    + R    Q ++E +   L++G L +P   +           S G + N R
Sbjct: 42  PGLTRE----QERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTR 101

Query: 146 -MLYNELLELEKREVIGEILKLNPSYKAPPDYRPLLKEDRLPLPFKVLQYIGDFAQSFIE 205
                + LE E+  +I E++ LNP +K P DY+P        +  KV+            
Sbjct: 102 EFRTRKKLEEERHNLITEMVALNPDFKPPADYKP----PATRVSDKVM------------ 161

Query: 206 FPPRPVKEYPGFNFIGLIYGPNGENQKRLEKETGAKIRICGIKAGTGEKVIPLTKKVITM 265
               P  EYP  NF+GL+ GP G   K +EKE  AKI I G             K  +  
Sbjct: 162 ---IPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRG-------------KGSVKE 221

Query: 266 DEIKPTDVHRIHNAYEELYVYMSADTFDKIDAAISVIELLITSISGNLATGSTSSDFLST 325
            ++   D   +    E L+  ++A+T + +  A+  I  ++      + T    +D    
Sbjct: 222 GKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQ---GIETPEDQNDLRKM 281

Query: 326 EESSCSRAEGTIVSDMGQTPMPNQG----------------------------------- 385
           +    +R  GT+  D  +   P Q                                    
Sbjct: 282 QLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDPQS 341

Query: 386 --------------VMQQGQVYTPTSLQGQFHYPNTWPSHNLTPSPGFISPQNPPPSIIN 445
                         + + G+   P S+ G    P T P  +  P P   +   PPPS+++
Sbjct: 342 AQDKARMDKEYLSLMAELGEAPVPASV-GSTSGPATTPLAS-APRPAAPANNPPPPSLMS 401

Query: 446 N-----PIHLSTPSSN-------------ISNVPSSFVRPPATVAFN------------- 505
                 P   S PS +                 P SF  P  ++                
Sbjct: 402 TTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGP 461

Query: 506 -PAFRGPPVPPPRQQLH------AQDLQQPFMTQPSHVSQPRLHALTIQRPSLVPPNVSN 565
            P +  PP PP  Q  H         + Q   + P      RLH    Q   ++PP    
Sbjct: 462 PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLH----QGKGMMPPP--- 521

Query: 566 PNFNGSGQLPSGLL--PNMPGSSLPQLVPSS-IPPGSRPDFSGPAAGSSASMGANNMGQM 625
                    P G++  P  P S  P   PS  +PP  +     P     +S        M
Sbjct: 522 ---------PMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSS-------SM 581

Query: 626 ALSLPRPFAPRAAPPLGVNSSGAVPTNTAVANVDGYASFPSGPSTPQAKGINTNHPNTAP 643
           A S P P+            +G++P           A+  + P  PQ +G    +P   P
Sbjct: 582 ASSTPLPWQQNTTTTTTSAGTGSIPPWQ-----QQQAAAAASPGAPQMQG----NPTMVP 612

[Close]

BLAST of Clc02G25270 vs. ExPASy TrEMBL
Match: A0A5D3DE05 (Splicing factor 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00440 PE=4 SV=1)

HSP 1 Score: 1305.4 bits (3377), Expect = 0.0e+00
Identity = 687/832 (82.57%), Postives = 722/832 (86.78%), Query Frame = 0


Query: 1   MSTEVEKTSHIESKNVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MS EVEKTSHIESKNVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKTSHIESKNVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNE-SANGENDKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIVELLKSGTLE 120
           NKKLGGNE SANGENDKQTQRNTKWGPDLTQDTA+RKGRLIAYQTRLEQI+ELLKSGTLE
Sbjct: 61  NKKLGGNESSANGENDKQTQRNTKWGPDLTQDTAIRKGRLIAYQTRLEQIMELLKSGTLE 120

Query: 121 VPKTQDSTLEGENVQDCSPGPQANNRMLYNELLELEKREVIGEILKLNPSYKAPPDYRPL 180
           V KTQDSTLEGENV+D SPG QAN++M YNELLELEKREVIGEILKLNPSYKAPPDYRPL
Sbjct: 121 VSKTQDSTLEGENVEDNSPGSQANSKMSYNELLELEKREVIGEILKLNPSYKAPPDYRPL 180

Query: 181 LKEDRLPLPFKVLQYIGDFAQSFIEFPPRPVKEYPGFNFIGLIYGPNGENQKRLEKETGA 240
           LKEDRLPL                     PVKEYPGFNFIGLIYGP+GENQKRLEKETGA
Sbjct: 181 LKEDRLPL---------------------PVKEYPGFNFIGLIYGPSGENQKRLEKETGA 240

Query: 241 KIRICGIKAGTGEKVIPLTKKVITMDEIKPTDVHRIHNAYEELYVYMSADTFDKIDAAIS 300
           KIRICG+KAGTGEK           DEIKPTDVH + N YEELYVYMSADTFDKIDAAIS
Sbjct: 241 KIRICGVKAGTGEK-----------DEIKPTDVHGVQNTYEELYVYMSADTFDKIDAAIS 300

Query: 301 VIELLITSISGNLATGSTSSDFLSTEESSCSRAEGTIVSDMGQTPMPNQGVMQQGQVYTP 360
           VIELLITSISGNLATGST SD +STEESS  +AEGT VSDMGQ PMPNQGVMQQGQVY P
Sbjct: 301 VIELLITSISGNLATGSTMSDLVSTEESSSRQAEGTAVSDMGQNPMPNQGVMQQGQVYGP 360

Query: 361 TSLQGQFHYPNTWPSHNLTPSPGFISPQNPPPSIINNPIHLSTPSSNISNVPSSFVRPPA 420
            S+ GQFHYP+TWPSHNLTP+P FISP NPP SIINNPIHLSTPSSN+ NVP SF RPPA
Sbjct: 361 PSVPGQFHYPSTWPSHNLTPAPEFISPHNPPSSIINNPIHLSTPSSNVPNVPLSFARPPA 420

Query: 421 TVAFNPAFRGPPVPPPRQQLHAQDLQQPFMTQPSHVSQPRLHALTIQR-PSLVPPNVSNP 480
            VAFNPAFRGPPVPPPRQQLHAQDLQQPF++Q +HV QPRLHAL++Q+ PSLVP NVS P
Sbjct: 421 PVAFNPAFRGPPVPPPRQQLHAQDLQQPFISQTNHVGQPRLHALSLQQLPSLVPSNVSKP 480

Query: 481 NFNGSGQLPSGLLPNMPGSSLPQLVPSSIPPGSRPD--FSGPAAGSSASMGANNMGQMAL 540
           NF GSG LPSGLLPN  GSSLPQL+PS++PPGSRPD   +    GSS SMGANNMGQMA 
Sbjct: 481 NFTGSGPLPSGLLPNTSGSSLPQLLPSNVPPGSRPDRPLTPSIVGSSVSMGANNMGQMAP 540

Query: 541 SLPRPFAPRAAPPLGVNSSGAVPTNTAVANVDGYASFPSGPSTPQAK-GINTNHPNTAPI 600
           SLP PF PRA PP GVN SGA P +TA AN+DGYASFPSGPSTPQA  GINTNHPNTAPI
Sbjct: 541 SLPLPFGPRAVPPQGVNISGAAPADTAAANMDGYASFPSGPSTPQATGGINTNHPNTAPI 600

Query: 601 PSHQMGHRPPFSVPSAMLPSPAHNPQGNFIAGSASTPPTPPTNTSNFTFQPRGPQNASPQ 660
           PSHQMGHRPPFSVPSA+LPS AHNP GNFI GSAS PPTPPTNTSNFTFQPRGPQN SPQ
Sbjct: 601 PSHQMGHRPPFSVPSALLPSSAHNPPGNFIGGSASNPPTPPTNTSNFTFQPRGPQNPSPQ 660

Query: 661 TILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFPRIANQPFHGPQAVSQIGTHQIQEIAS 720
           T LNLNIQNTPT  TLQQPASGAPSFHP+APNF R+ANQPF GPQA SQIGTHQIQ+IAS
Sbjct: 661 TNLNLNIQNTPTGLTLQQPASGAPSFHPSAPNFLRVANQPFPGPQAGSQIGTHQIQDIAS 720

Query: 721 NPIGMLVSTRIPAFLDPGPRTQLHQRNLGPGMQMPNLPGNFPHRQGNPMQSEQGFPMRAP 780
           NPIG+ VSTRIPAFLDPGPRTQLHQRN GPG+QMPNLPGNFPHR G  +Q EQ F MRA 
Sbjct: 721 NPIGIQVSTRIPAFLDPGPRTQLHQRNFGPGLQMPNLPGNFPHRPGTSIQFEQEFHMRAR 780

Query: 781 RPEVRFAPPQYSSNLTFVSGKPPPSSGGQQIYDPFSPTSVSGPPQQGSNPLR 828
           RPE+RF PP YSSNLTFVSGK PPSSGGQQ+YDPFSPTSVSGP  QGSNPLR
Sbjct: 781 RPELRFTPPLYSSNLTFVSGKLPPSSGGQQVYDPFSPTSVSGPQHQGSNPLR 800

[Close]

BLAST of Clc02G25270 vs. ExPASy TrEMBL
Match: A0A1S3BNI1 (splicing factor 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491578 PE=4 SV=1)

HSP 1 Score: 1305.4 bits (3377), Expect = 0.0e+00
Identity = 687/832 (82.57%), Postives = 722/832 (86.78%), Query Frame = 0


Query: 1   MSTEVEKTSHIESKNVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MS EVEKTSHIESKNVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKTSHIESKNVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNE-SANGENDKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIVELLKSGTLE 120
           NKKLGGNE SANGENDKQTQRNTKWGPDLTQDTA+RKGRLIAYQTRLEQI+ELLKSGTLE
Sbjct: 61  NKKLGGNESSANGENDKQTQRNTKWGPDLTQDTAIRKGRLIAYQTRLEQIMELLKSGTLE 120

Query: 121 VPKTQDSTLEGENVQDCSPGPQANNRMLYNELLELEKREVIGEILKLNPSYKAPPDYRPL 180
           V KTQDSTLEGENV+D SPG QAN++M YNELLELEKREVIGEILKLNPSYKAPPDYRPL
Sbjct: 121 VSKTQDSTLEGENVEDNSPGSQANSKMSYNELLELEKREVIGEILKLNPSYKAPPDYRPL 180

Query: 181 LKEDRLPLPFKVLQYIGDFAQSFIEFPPRPVKEYPGFNFIGLIYGPNGENQKRLEKETGA 240
           LKEDRLPL                     PVKEYPGFNFIGLIYGP+GENQKRLEKETGA
Sbjct: 181 LKEDRLPL---------------------PVKEYPGFNFIGLIYGPSGENQKRLEKETGA 240

Query: 241 KIRICGIKAGTGEKVIPLTKKVITMDEIKPTDVHRIHNAYEELYVYMSADTFDKIDAAIS 300
           KIRICG+KAGTGEK           DEIKPTDVH + N YEELYVYMSADTFDKIDAAIS
Sbjct: 241 KIRICGVKAGTGEK-----------DEIKPTDVHGVQNTYEELYVYMSADTFDKIDAAIS 300

Query: 301 VIELLITSISGNLATGSTSSDFLSTEESSCSRAEGTIVSDMGQTPMPNQGVMQQGQVYTP 360
           VIELLITSISGNLATGST SD +STEESS  +AEGT VSDMGQ PMPNQGVMQQGQVY P
Sbjct: 301 VIELLITSISGNLATGSTMSDLVSTEESSSRQAEGTAVSDMGQNPMPNQGVMQQGQVYGP 360

Query: 361 TSLQGQFHYPNTWPSHNLTPSPGFISPQNPPPSIINNPIHLSTPSSNISNVPSSFVRPPA 420
            S+ GQFHYP+TWPSHNLTP+P FISP NPP SIINNPIHLSTPSSN+ NVP SF RPPA
Sbjct: 361 PSVPGQFHYPSTWPSHNLTPAPEFISPHNPPSSIINNPIHLSTPSSNVPNVPLSFARPPA 420

Query: 421 TVAFNPAFRGPPVPPPRQQLHAQDLQQPFMTQPSHVSQPRLHALTIQR-PSLVPPNVSNP 480
            VAFNPAFRGPPVPPPRQQLHAQDLQQPF++Q +HV QPRLHAL++Q+ PSLVP NVS P
Sbjct: 421 PVAFNPAFRGPPVPPPRQQLHAQDLQQPFISQTNHVGQPRLHALSLQQLPSLVPSNVSKP 480

Query: 481 NFNGSGQLPSGLLPNMPGSSLPQLVPSSIPPGSRPD--FSGPAAGSSASMGANNMGQMAL 540
           NF GSG LPSGLLPN  GSSLPQL+PS++PPGSRPD   +    GSS SMGANNMGQMA 
Sbjct: 481 NFTGSGPLPSGLLPNTSGSSLPQLLPSNVPPGSRPDRPLTPSIVGSSVSMGANNMGQMAP 540

Query: 541 SLPRPFAPRAAPPLGVNSSGAVPTNTAVANVDGYASFPSGPSTPQAK-GINTNHPNTAPI 600
           SLP PF PRA PP GVN SGA P +TA AN+DGYASFPSGPSTPQA  GINTNHPNTAPI
Sbjct: 541 SLPLPFGPRAVPPQGVNISGAAPADTAAANMDGYASFPSGPSTPQATGGINTNHPNTAPI 600

Query: 601 PSHQMGHRPPFSVPSAMLPSPAHNPQGNFIAGSASTPPTPPTNTSNFTFQPRGPQNASPQ 660
           PSHQMGHRPPFSVPSA+LPS AHNP GNFI GSAS PPTPPTNTSNFTFQPRGPQN SPQ
Sbjct: 601 PSHQMGHRPPFSVPSALLPSSAHNPPGNFIGGSASNPPTPPTNTSNFTFQPRGPQNPSPQ 660

Query: 661 TILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFPRIANQPFHGPQAVSQIGTHQIQEIAS 720
           T LNLNIQNTPT  TLQQPASGAPSFHP+APNF R+ANQPF GPQA SQIGTHQIQ+IAS
Sbjct: 661 TNLNLNIQNTPTGLTLQQPASGAPSFHPSAPNFLRVANQPFPGPQAGSQIGTHQIQDIAS 720

Query: 721 NPIGMLVSTRIPAFLDPGPRTQLHQRNLGPGMQMPNLPGNFPHRQGNPMQSEQGFPMRAP 780
           NPIG+ VSTRIPAFLDPGPRTQLHQRN GPG+QMPNLPGNFPHR G  +Q EQ F MRA 
Sbjct: 721 NPIGIQVSTRIPAFLDPGPRTQLHQRNFGPGLQMPNLPGNFPHRPGTSIQFEQEFHMRAR 780

Query: 781 RPEVRFAPPQYSSNLTFVSGKPPPSSGGQQIYDPFSPTSVSGPPQQGSNPLR 828
           RPE+RF PP YSSNLTFVSGK PPSSGGQQ+YDPFSPTSVSGP  QGSNPLR
Sbjct: 781 RPELRFTPPLYSSNLTFVSGKLPPSSGGQQVYDPFSPTSVSGPQHQGSNPLR 800

[Close]

BLAST of Clc02G25270 vs. ExPASy TrEMBL
Match: A0A5A7TEU0 (Splicing factor 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold366G00250 PE=4 SV=1)

HSP 1 Score: 1300.8 bits (3365), Expect = 0.0e+00
Identity = 687/833 (82.47%), Postives = 722/833 (86.67%), Query Frame = 0


Query: 1   MSTEVEKTSHIESKNVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MS EVEKTSHIESKNVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKTSHIESKNVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNE-SANGENDKQTQRNTKWGPDLTQDTAVRKGRLIAY-QTRLEQIVELLKSGTL 120
           NKKLGGNE SANGENDKQTQRNTKWGPDLTQDTA+RKGRLIAY QTRLEQI+ELLKSGTL
Sbjct: 61  NKKLGGNESSANGENDKQTQRNTKWGPDLTQDTAIRKGRLIAYQQTRLEQIMELLKSGTL 120

Query: 121 EVPKTQDSTLEGENVQDCSPGPQANNRMLYNELLELEKREVIGEILKLNPSYKAPPDYRP 180
           EV KTQDSTLEGENV+D SPG QAN++M YNELLELEKREVIGEILKLNPSYKAPPDYRP
Sbjct: 121 EVSKTQDSTLEGENVEDNSPGSQANSKMSYNELLELEKREVIGEILKLNPSYKAPPDYRP 180

Query: 181 LLKEDRLPLPFKVLQYIGDFAQSFIEFPPRPVKEYPGFNFIGLIYGPNGENQKRLEKETG 240
           LLKEDRLPL                     PVKEYPGFNFIGLIYGP+GENQKRLEKETG
Sbjct: 181 LLKEDRLPL---------------------PVKEYPGFNFIGLIYGPSGENQKRLEKETG 240

Query: 241 AKIRICGIKAGTGEKVIPLTKKVITMDEIKPTDVHRIHNAYEELYVYMSADTFDKIDAAI 300
           AKIRICG+KAGTGEK           DEIKPTDVH + N YEELYVYMSADTFDKIDAAI
Sbjct: 241 AKIRICGVKAGTGEK-----------DEIKPTDVHGVQNTYEELYVYMSADTFDKIDAAI 300

Query: 301 SVIELLITSISGNLATGSTSSDFLSTEESSCSRAEGTIVSDMGQTPMPNQGVMQQGQVYT 360
           SVIELLITSISGNLATGST SD +STEESS  +AEGT VSDMGQ PMPNQGVMQQGQVY 
Sbjct: 301 SVIELLITSISGNLATGSTMSDLVSTEESSSRQAEGTAVSDMGQNPMPNQGVMQQGQVYG 360

Query: 361 PTSLQGQFHYPNTWPSHNLTPSPGFISPQNPPPSIINNPIHLSTPSSNISNVPSSFVRPP 420
           P S+ GQFHYP+TWPSHNLTP+P FISP NPP SIINNPIHLSTPSSN+ NVP SF RPP
Sbjct: 361 PPSVPGQFHYPSTWPSHNLTPAPEFISPHNPPSSIINNPIHLSTPSSNVPNVPLSFARPP 420

Query: 421 ATVAFNPAFRGPPVPPPRQQLHAQDLQQPFMTQPSHVSQPRLHALTIQR-PSLVPPNVSN 480
           A VAFNPAFRGPPVPPPRQQLHAQDLQQPF++Q +HV QPRLHAL++Q+ PSLVP NVS 
Sbjct: 421 APVAFNPAFRGPPVPPPRQQLHAQDLQQPFISQTNHVGQPRLHALSLQQLPSLVPSNVSK 480

Query: 481 PNFNGSGQLPSGLLPNMPGSSLPQLVPSSIPPGSRPD--FSGPAAGSSASMGANNMGQMA 540
           PNF GSG LPSGLLPN  GSSLPQL+PS++PPGSRPD   +    GSS SMGANNMGQMA
Sbjct: 481 PNFTGSGPLPSGLLPNTSGSSLPQLLPSNVPPGSRPDRPLTPSIVGSSVSMGANNMGQMA 540

Query: 541 LSLPRPFAPRAAPPLGVNSSGAVPTNTAVANVDGYASFPSGPSTPQAK-GINTNHPNTAP 600
            SLP PF PRA PP GVN SGA P +TA AN+DGYASFPSGPSTPQA  GINTNHPNTAP
Sbjct: 541 PSLPLPFGPRAVPPQGVNISGAAPADTAAANMDGYASFPSGPSTPQATGGINTNHPNTAP 600

Query: 601 IPSHQMGHRPPFSVPSAMLPSPAHNPQGNFIAGSASTPPTPPTNTSNFTFQPRGPQNASP 660
           IPSHQMGHRPPFSVPSA+LPS AHNP GNFI GSAS PPTPPTNTSNFTFQPRGPQN SP
Sbjct: 601 IPSHQMGHRPPFSVPSALLPSSAHNPPGNFIGGSASNPPTPPTNTSNFTFQPRGPQNPSP 660

Query: 661 QTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFPRIANQPFHGPQAVSQIGTHQIQEIA 720
           QT LNLNIQNTPT  TLQQPASGAPSFHP+APNF R+ANQPF GPQA SQIGTHQIQ+IA
Sbjct: 661 QTNLNLNIQNTPTGLTLQQPASGAPSFHPSAPNFLRVANQPFPGPQAGSQIGTHQIQDIA 720

Query: 721 SNPIGMLVSTRIPAFLDPGPRTQLHQRNLGPGMQMPNLPGNFPHRQGNPMQSEQGFPMRA 780
           SNPIG+ VSTRIPAFLDPGPRTQLHQRN GPG+QMPNLPGNFPHR G  +Q EQ F MRA
Sbjct: 721 SNPIGIQVSTRIPAFLDPGPRTQLHQRNFGPGLQMPNLPGNFPHRPGTSIQFEQEFHMRA 780

Query: 781 PRPEVRFAPPQYSSNLTFVSGKPPPSSGGQQIYDPFSPTSVSGPPQQGSNPLR 828
            RPE+RF PP YSSNLTFVSGK PPSSGGQQ+YDPFSPTSVSGP  QGSNPLR
Sbjct: 781 RRPELRFTPPLYSSNLTFVSGKLPPSSGGQQVYDPFSPTSVSGPQHQGSNPLR 801

[Close]

BLAST of Clc02G25270 vs. ExPASy TrEMBL
Match: A0A0A0L1R9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G280580 PE=4 SV=1)

HSP 1 Score: 1247.6 bits (3227), Expect = 0.0e+00
Identity = 669/832 (80.41%), Postives = 693/832 (83.29%), Query Frame = 0


Query: 1   MSTEVEKTSHIESKNVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MS EVEKTSHIESKNVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKTSHIESKNVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNE-SANGENDKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIVELLKSGTLE 120
           NKKLGGNE SANGENDKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQI+ELLKSGTLE
Sbjct: 61  NKKLGGNESSANGENDKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIMELLKSGTLE 120

Query: 121 VPKTQDSTLEGENVQDCSPGPQANNRMLYNELLELEKREVIGEILKLNPSYKAPPDYRPL 180
           VPKTQDSTLE ENV+D SPG QANN+  YNELLELEKREVIGEILKLNPSYKAPPDYRPL
Sbjct: 121 VPKTQDSTLECENVEDNSPGSQANNKTSYNELLELEKREVIGEILKLNPSYKAPPDYRPL 180

Query: 181 LKEDRLPLPFKVLQYIGDFAQSFIEFPPRPVKEYPGFNFIGLIYGPNGENQKRLEKETGA 240
           LKEDRLPL                     PVKEYPGFNFIGLIYGP+GENQKRLEKETGA
Sbjct: 181 LKEDRLPL---------------------PVKEYPGFNFIGLIYGPSGENQKRLEKETGA 240

Query: 241 KIRICGIKAGTGEKVIPLTKKVITMDEIKPTDVHRIHNAYEELYVYMSADTFDKIDAAIS 300
           KIRICG+KAGTGEK           DEIKPTDVH I N YEELYVYMSADTFDKIDAAIS
Sbjct: 241 KIRICGVKAGTGEK-----------DEIKPTDVHGIQNTYEELYVYMSADTFDKIDAAIS 300

Query: 301 VIELLITSISGNLATGSTSSDFLSTEESSCSRAEGTIVSDMGQTPMPNQGVMQQGQVYTP 360
           VIELLITSISGNLATGST SD +STEESS S+A+GT VSDMGQ PMPNQGVMQQGQ Y P
Sbjct: 301 VIELLITSISGNLATGSTLSDLVSTEESSSSQADGTTVSDMGQNPMPNQGVMQQGQFYGP 360

Query: 361 TSLQGQFHYPNTWPSHNLTPSPGFISPQNPPPSIINNPIHLSTPSSNISNVPSSFVRPPA 420
            S+ GQFHYP+TWPSHNLTP+PGFISPQNPP SIINNPIHLSTPSSN+ NVPS F  PPA
Sbjct: 361 PSVPGQFHYPSTWPSHNLTPAPGFISPQNPPSSIINNPIHLSTPSSNVPNVPSLFAHPPA 420

Query: 421 TVAFNPAFRGPPVPPPRQQLHAQDLQQPFMTQPSHVSQPRLHALTIQR-PSLVPPNVSNP 480
            V+FNPAFRGPPVPPPRQQLHAQD+QQPFM Q SHV QPRLHAL  QR PSLVP NVS P
Sbjct: 421 PVSFNPAFRGPPVPPPRQQLHAQDVQQPFMAQTSHVGQPRLHALPHQRLPSLVPSNVSKP 480

Query: 481 NFNGSGQLPSGLLPNMPGSSLPQLVPSSIPPGSRPD--FSGPAAGSSASMGANNMGQMAL 540
           NF  SG LPSGLLPNM GSSLPQLVPSS PPGSRPD   +    GSS SMGANNMGQMA 
Sbjct: 481 NFTSSGPLPSGLLPNMAGSSLPQLVPSSFPPGSRPDHPLAPNIVGSSVSMGANNMGQMAP 540

Query: 541 SLPRPFAPRAAPPLGVNSSGAVPTNTAVANVDGYASFPSGPSTPQAKGINTNHPNTAPIP 600
           SLP PF PRAAPP G+N SGA P +TA ANVDGYASFPSGPSTPQA GIN NH NTAPIP
Sbjct: 541 SLPPPFGPRAAPPQGLNISGAAPADTAAANVDGYASFPSGPSTPQATGINVNHHNTAPIP 600

Query: 601 SHQMGHRPPFSVPSAMLPSPAHNPQGNFIAGSASTPPTPPTNTSNFTFQPRGPQNASPQT 660
           SHQMGHRPPFSVPSA+LPSPAHNP GNFI GSAS PPTPPTNTSNFTFQPRGPQN SPQT
Sbjct: 601 SHQMGHRPPFSVPSALLPSPAHNPPGNFIGGSASNPPTPPTNTSNFTFQPRGPQNPSPQT 660

Query: 661 ILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFPRIANQPFHGPQAVSQIGTHQIQEIASN 720
           ILNLNIQNTPT PTLQQPASGAPSFHP+APNF R+ANQPF GPQA SQI           
Sbjct: 661 ILNLNIQNTPTGPTLQQPASGAPSFHPSAPNFLRVANQPFPGPQAGSQI----------- 720

Query: 721 PIGMLVSTRIPAFLDPGPRTQLHQRNLGPGMQMPNLPGNFPHRQGNPMQSEQGFPMRAPR 780
                           GPRTQLHQRN GPG QMPNLPGNFPHR G  +Q EQ F MR  +
Sbjct: 721 ----------------GPRTQLHQRNFGPGFQMPNLPGNFPHRPGTSIQFEQDFHMRPRQ 773

Query: 781 PEVRFAPPQYSSNLTFVSGK-PPPSSGGQQIYDPFSPTSVSGPPQQGSNPLR 828
           PE+RF PPQYSSNLTFVSGK  PPSSGGQQ+YDPFSPTSVSGP  QGSNPLR
Sbjct: 781 PELRFTPPQYSSNLTFVSGKLLPPSSGGQQVYDPFSPTSVSGPQHQGSNPLR 773

[Close]

BLAST of Clc02G25270 vs. ExPASy TrEMBL
Match: A0A1S3BNT5 (branchpoint-bridging protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491578 PE=4 SV=1)

HSP 1 Score: 1241.9 bits (3212), Expect = 0.0e+00
Identity = 663/832 (79.69%), Postives = 696/832 (83.65%), Query Frame = 0


Query: 1   MSTEVEKTSHIESKNVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MS EVEKTSHIESKNVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKTSHIESKNVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNE-SANGENDKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIVELLKSGTLE 120
           NKKLGGNE SANGENDKQTQRNTKWGPDLTQDTA+RKGRLIAYQTRLEQI+ELLKSGTLE
Sbjct: 61  NKKLGGNESSANGENDKQTQRNTKWGPDLTQDTAIRKGRLIAYQTRLEQIMELLKSGTLE 120

Query: 121 VPKTQDSTLEGENVQDCSPGPQANNRMLYNELLELEKREVIGEILKLNPSYKAPPDYRPL 180
           V KTQDSTLEGENV+D SPG QAN++M YNELLELEKREVIGEILKLNPSYKAPPDYRPL
Sbjct: 121 VSKTQDSTLEGENVEDNSPGSQANSKMSYNELLELEKREVIGEILKLNPSYKAPPDYRPL 180

Query: 181 LKEDRLPLPFKVLQYIGDFAQSFIEFPPRPVKEYPGFNFIGLIYGPNGENQKRLEKETGA 240
           LKEDRLPL                     PVKEYPGFNFIGLIYGP+GENQKRLEKETGA
Sbjct: 181 LKEDRLPL---------------------PVKEYPGFNFIGLIYGPSGENQKRLEKETGA 240

Query: 241 KIRICGIKAGTGEKVIPLTKKVITMDEIKPTDVHRIHNAYEELYVYMSADTFDKIDAAIS 300
           KIRICG+KAGTGEK           DEIKPTDVH + N YEELYVYMSADTFDKIDAAIS
Sbjct: 241 KIRICGVKAGTGEK-----------DEIKPTDVHGVQNTYEELYVYMSADTFDKIDAAIS 300

Query: 301 VIELLITSISGNLATGSTSSDFLSTEESSCSRAEGTIVSDMGQTPMPNQGVMQQGQVYTP 360
           VIELLITSISGNLATGST SD +STEESS  +AEGT VSDMGQ PMPNQGVMQQGQVY P
Sbjct: 301 VIELLITSISGNLATGSTMSDLVSTEESSSRQAEGTAVSDMGQNPMPNQGVMQQGQVYGP 360

Query: 361 TSLQGQFHYPNTWPSHNLTPSPGFISPQNPPPSIINNPIHLSTPSSNISNVPSSFVRPPA 420
            S+ GQFHYP+TWPSHNLTP+P FISP NPP SIINNPIHLSTPSSN+ NVP SF RPPA
Sbjct: 361 PSVPGQFHYPSTWPSHNLTPAPEFISPHNPPSSIINNPIHLSTPSSNVPNVPLSFARPPA 420

Query: 421 TVAFNPAFRGPPVPPPRQQLHAQDLQQPFMTQPSHVSQPRLHALTIQR-PSLVPPNVSNP 480
            VAFNPAFRGPPVPPPRQQLHAQDLQQPF++Q +HV QPRLHAL++Q+ PSLVP NVS P
Sbjct: 421 PVAFNPAFRGPPVPPPRQQLHAQDLQQPFISQTNHVGQPRLHALSLQQLPSLVPSNVSKP 480

Query: 481 NFNGSGQLPSGLLPNMPGSSLPQLVPSSIPPGSRPD--FSGPAAGSSASMGANNMGQMAL 540
           NF GSG LPSGLLPN  GSSLPQL+PS++PPGSRPD   +    GSS SMGANNMGQMA 
Sbjct: 481 NFTGSGPLPSGLLPNTSGSSLPQLLPSNVPPGSRPDRPLTPSIVGSSVSMGANNMGQMAP 540

Query: 541 SLPRPFAPRAAPPLGVNSSGAVPTNTAVANVDGYASFPSGPSTPQAK-GINTNHPNTAPI 600
           SLP PF PRA PP GVN SGA P +TA AN+DGYASFPSGPSTPQA  GINTNHPNTAPI
Sbjct: 541 SLPLPFGPRAVPPQGVNISGAAPADTAAANMDGYASFPSGPSTPQATGGINTNHPNTAPI 600

Query: 601 PSHQMGHRPPFSVPSAMLPSPAHNPQGNFIAGSASTPPTPPTNTSNFTFQPRGPQNASPQ 660
           PSHQMGHRPPFSVPSA+LPS AHNP GNFI GSAS PPTPPTNTSNFTFQPRGPQN SPQ
Sbjct: 601 PSHQMGHRPPFSVPSALLPSSAHNPPGNFIGGSASNPPTPPTNTSNFTFQPRGPQNPSPQ 660

Query: 661 TILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFPRIANQPFHGPQAVSQIGTHQIQEIAS 720
           T LNLNIQNTPT  TLQQPASGAPSFHP+APNF R+ANQPF GPQA SQI          
Sbjct: 661 TNLNLNIQNTPTGLTLQQPASGAPSFHPSAPNFLRVANQPFPGPQAGSQI---------- 720

Query: 721 NPIGMLVSTRIPAFLDPGPRTQLHQRNLGPGMQMPNLPGNFPHRQGNPMQSEQGFPMRAP 780
                            GPRTQLHQRN GPG+QMPNLPGNFPHR G  +Q EQ F MRA 
Sbjct: 721 -----------------GPRTQLHQRNFGPGLQMPNLPGNFPHRPGTSIQFEQEFHMRAR 773

Query: 781 RPEVRFAPPQYSSNLTFVSGKPPPSSGGQQIYDPFSPTSVSGPPQQGSNPLR 828
           RPE+RF PP YSSNLTFVSGK PPSSGGQQ+YDPFSPTSVSGP  QGSNPLR
Sbjct: 781 RPELRFTPPLYSSNLTFVSGKLPPSSGGQQVYDPFSPTSVSGPQHQGSNPLR 773

[Close]

BLAST of Clc02G25270 vs. TAIR 10
Match: AT3G32940.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 226.1 bits (575), Expect = 1.0e-58
Identity = 207/601 (34.44%), Postives = 283/601 (47.09%), Query Frame = 0


Query: 33  KVSMFAAKTGFVIPKNKLSGSLVPIF-RVNKKLGGNESANGENDK-QTQRNTKWGPDLTQ 92
           K+SMF AK+GFVIPKNKLSGSL+PIF R NK LG  +S  G   K   +R TKW PDL+Q
Sbjct: 8   KISMFGAKSGFVIPKNKLSGSLIPIFQRGNKTLGSADSDTGPPSKLGKKRKTKWAPDLSQ 67

Query: 93  DTAVRKGRLIAYQTRLEQIVELLKSGTLEVPKTQDSTLEGENVQDCSPGPQANNRMLYNE 152
           D AV+K R +AYQ R++QI + L+SGTLEV   +                          
Sbjct: 68  DIAVKKCRFLAYQKRVDQITQRLESGTLEVETNRTD------------------------ 127

Query: 153 LLELEKREVIGEILKLNPSYKAPPDYRPLLKEDRLPLPFKVLQYIGDFAQSFIEFPPRPV 212
            LE EKRE IGEIL+LNP YKAPPDY+PLLKE RLP+                      V
Sbjct: 128 -LEFEKREAIGEILELNPRYKAPPDYKPLLKEARLPI---------------------DV 187

Query: 213 KEYPGFNFIGLIYGPNGENQKRLEKETGAKIRICGIKAGTGEKVIPLTKKVITMDEIKPT 272
           KE+  F+F+ LI+G  G+ QKRLEKETGAK++I G K G GEKV           E+ P+
Sbjct: 188 KEHSDFSFLSLIFGSQGDTQKRLEKETGAKVQIFGTKTG-GEKV-----------ELSPS 247

Query: 273 DVHRIHNAYEELYVYMSADTFDKIDAAISVIELLITSISGNLATGSTSSDFLSTEESSC- 332
           D + I  +++ELY  +S+DT++K+DAAI+V+ELL++S+SGN   G+     +S   S+  
Sbjct: 248 DENEIQKSWQELYFQISSDTYEKVDAAIAVVELLMSSVSGNTGAGAAPPSSISEIISTIP 307

Query: 333 SRAEGTIVSDMGQTPMPNQGVMQQGQVYTPTSLQGQFHYP--------------NTWPSH 392
             +  T  +   +    +  V+Q G  +  +S Q   H P                 P +
Sbjct: 308 GNSIATATAPTSERTTDHSQVLQHGSSFHLSSNQAPLHPPLEHFVSGLGYNIQEQELPKN 367

Query: 393 NLTPSPGFISPQNPPPSIINNPIHLSTPSSNISNVPSSF----VRPPATVAFN-PAFRGP 452
           ++  +P F     P P   + P     P S++   P SF       P T +   P + G 
Sbjct: 368 SMNLNPLFAQQLLPVPHDTSLP-----PGSHVPRPPDSFPFSLSNTPRTYSVTLPPYSGS 427

Query: 453 PVPP--PRQQLHAQDLQQPFMTQPSHVSQPRLHALTIQRPSLVPPNVSN-----PNFNGS 512
            + P  PR  +    L   F   P H            RP+L+P    +     PNF+  
Sbjct: 428 QIQPIGPRSTVRPSTL---FTFHPVH------------RPTLLPDIDQSVRPLAPNFSPH 487

Query: 513 GQLPSGLLPNMPGSSLPQLVPSSIPPGSRPDFSGPAAGSSASMGANNMGQMALSLPRPFA 572
                  + + PG+ +P     SIP  S         GS +S+   ++     S P    
Sbjct: 488 P------VAHQPGTEIP-----SIPFPSASSLIA-EYGSGSSLRPMSVSPHIASRPAGLV 501

Query: 573 PRAAPPLGVNSSGAVPTNTAVANVDGYASFPSGPSTPQAKGINTNHPNTAPIPSHQMGHR 605
           P A P          PTNTA     G   +      PQ   I T  P+ +P P+ Q  H 
Sbjct: 548 P-AYP----------PTNTASRPFHGDFGY-----IPQQSNIITT-PHISPRPNSQSAHL 501

[Close]

BLAST of Clc02G25270 vs. TAIR 10
Match: AT5G51300.1 (splicing factor-related )

HSP 1 Score: 49.7 bits (117), Expect = 1.3e-05
Identity = 174/732 (23.77%), Postives = 266/732 (36.34%), Query Frame = 0


Query: 67  NESANGENDKQT---QRNTKWG----------PDLTQDTA---VRKGRLIAYQTRLEQIV 126
           N SA G  D  T   +R ++W           PD  +D          + A  +RL +I 
Sbjct: 110 NPSAEGGTDSGTGTRKRKSRWADDEPRTQIQLPDFMKDFTGGIEFDPEIQALNSRLLEIS 169

Query: 127 ELLKSGTLEVPKTQDSTLEGENVQDCSP-----GPQANNR-MLYNELLELEKREVIGEIL 186
            +L+SG        D   EG+      P     G + N R     E L  E++E+I +I+
Sbjct: 170 RMLQSG-----MPLDDRPEGQRSPSPEPVYDNMGIRINTREYRARERLNRERQEIIAQII 229

Query: 187 KLNPSYKAPPDYRPLLKEDRLPLPFKVLQYIGDFAQSFIEFPPRPVKEYPGFNFIGLIYG 246
           K NP++K P DYRP     +L                FI     P+KE+PG+NFIGLI G
Sbjct: 230 KKNPAFKPPADYRPPKLHKKL----------------FI-----PMKEFPGYNFIGLIIG 289

Query: 247 PNGENQKRLEKETGAKIRICG---IKAGTGEKVIPLTKKVITMDEIKPTDVHRIHNAYEE 306
           P G  QKR+E+ETGAKI I G   +K G  ++     KK +  D           +  E+
Sbjct: 290 PRGNTQKRMERETGAKIVIRGKGSVKEGRHQQ-----KKDLKYDP----------SENED 349

Query: 307 LYVYMSADTFDKIDAAISVIELLITSIS--------GNLATGSTSSDFLSTEE------- 366
           L+V + A+T + ++AA  ++E L+  +           L   +T +  +  EE       
Sbjct: 350 LHVLVEAETQEALEAAAGMVEKLLQPVDEVLNEHKRQQLRELATLNGTIRDEEFCRLCGE 409

Query: 367 -----SSCSRAEGTIVSDM-------GQTP---MPNQGV----MQQGQVYTPTSLQGQFH 426
                 +C     T  SD+       G  P    P +G     M          L G   
Sbjct: 410 PGHRQYACPSRTNTFKSDVLCKICGDGGHPTIDCPVKGTTGKKMDDEYQNFLAELGGTVP 469

Query: 427 YPNTWPSHNLTPSPGFISPQNPPPSIINNPIHLSTPSSNISNVPSSFVRPPATVAFNPAF 486
             +   S  L   PG  S  NPP +  NN  + ++    + + P+   +PP+        
Sbjct: 470 ESSLKQSATLALGPG-SSGSNPPWA--NNAGNGASAHPGLGSTPT---KPPSKEYDETNL 529

Query: 487 RGPPVPPPRQQLHAQDLQQPF-MTQPSHVSQPRLHALT----------IQRPSLVPPNVS 546
               +PP  +     +L   F     + V + R+  L+          +Q  +     ++
Sbjct: 530 YIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKGYGFVKYADVQMANTAVQAMN 589

Query: 547 NPNFNG-------SGQLPSGLLPNMPGSSLPQLVPSSIPPGSRPDFSGPAAGSSASMGAN 606
              F G       +G+ P  + P  PG   PQ      PP ++P  + P+     + G  
Sbjct: 590 GYRFEGRTLAVRIAGKSPPPIAP--PGPPAPQPPTQGYPPSNQPPGAYPS--QQYATGGY 649

Query: 607 NMGQMALSLPRP-FAPRAAPPLGVNSSGAVPTNTAVANVDGYASFPSGPSTPQAKGINTN 666
           +   +    P P ++P A PP         P   +   V G    P G   P        
Sbjct: 650 STAPVPWGPPVPSYSPYALPP---------PPPGSYHPVHGQHMPPYGMQYP-------- 709

Query: 667 HPNTAPIPSHQMGHRPPFSV--PSAMLPSPAHNPQGNFIAGSASTPPTPPTNTSNFTFQP 705
                P P H     PP +   PS+  P  +  P     +G+A++   P    S+ T  P
Sbjct: 710 -----PPPPHVTQAPPPGTTQNPSSSEPQQSFPPGVQADSGAATSSIPPNVYGSSVTAMP 768

[Close]

BLAST of Clc02G25270 vs. TAIR 10
Match: AT5G51300.2 (splicing factor-related )

HSP 1 Score: 49.7 bits (117), Expect = 1.3e-05
Identity = 174/732 (23.77%), Postives = 266/732 (36.34%), Query Frame = 0


Query: 67  NESANGENDKQT---QRNTKWG----------PDLTQDTA---VRKGRLIAYQTRLEQIV 126
           N SA G  D  T   +R ++W           PD  +D          + A  +RL +I 
Sbjct: 110 NPSAEGGTDSGTGTRKRKSRWADDEPRTQIQLPDFMKDFTGGIEFDPEIQALNSRLLEIS 169

Query: 127 ELLKSGTLEVPKTQDSTLEGENVQDCSP-----GPQANNR-MLYNELLELEKREVIGEIL 186
            +L+SG        D   EG+      P     G + N R     E L  E++E+I +I+
Sbjct: 170 RMLQSG-----MPLDDRPEGQRSPSPEPVYDNMGIRINTREYRARERLNRERQEIIAQII 229

Query: 187 KLNPSYKAPPDYRPLLKEDRLPLPFKVLQYIGDFAQSFIEFPPRPVKEYPGFNFIGLIYG 246
           K NP++K P DYRP     +L                FI     P+KE+PG+NFIGLI G
Sbjct: 230 KKNPAFKPPADYRPPKLHKKL----------------FI-----PMKEFPGYNFIGLIIG 289

Query: 247 PNGENQKRLEKETGAKIRICG---IKAGTGEKVIPLTKKVITMDEIKPTDVHRIHNAYEE 306
           P G  QKR+E+ETGAKI I G   +K G  ++     KK +  D           +  E+
Sbjct: 290 PRGNTQKRMERETGAKIVIRGKGSVKEGRHQQ-----KKDLKYDP----------SENED 349

Query: 307 LYVYMSADTFDKIDAAISVIELLITSIS--------GNLATGSTSSDFLSTEE------- 366
           L+V + A+T + ++AA  ++E L+  +           L   +T +  +  EE       
Sbjct: 350 LHVLVEAETQEALEAAAGMVEKLLQPVDEVLNEHKRQQLRELATLNGTIRDEEFCRLCGE 409

Query: 367 -----SSCSRAEGTIVSDM-------GQTP---MPNQGV----MQQGQVYTPTSLQGQFH 426
                 +C     T  SD+       G  P    P +G     M          L G   
Sbjct: 410 PGHRQYACPSRTNTFKSDVLCKICGDGGHPTIDCPVKGTTGKKMDDEYQNFLAELGGTVP 469

Query: 427 YPNTWPSHNLTPSPGFISPQNPPPSIINNPIHLSTPSSNISNVPSSFVRPPATVAFNPAF 486
             +   S  L   PG  S  NPP +  NN  + ++    + + P+   +PP+        
Sbjct: 470 ESSLKQSATLALGPG-SSGSNPPWA--NNAGNGASAHPGLGSTPT---KPPSKEYDETNL 529

Query: 487 RGPPVPPPRQQLHAQDLQQPF-MTQPSHVSQPRLHALT----------IQRPSLVPPNVS 546
               +PP  +     +L   F     + V + R+  L+          +Q  +     ++
Sbjct: 530 YIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKGYGFVKYADVQMANTAVQAMN 589

Query: 547 NPNFNG-------SGQLPSGLLPNMPGSSLPQLVPSSIPPGSRPDFSGPAAGSSASMGAN 606
              F G       +G+ P  + P  PG   PQ      PP ++P  + P+     + G  
Sbjct: 590 GYRFEGRTLAVRIAGKSPPPIAP--PGPPAPQPPTQGYPPSNQPPGAYPS--QQYATGGY 649

Query: 607 NMGQMALSLPRP-FAPRAAPPLGVNSSGAVPTNTAVANVDGYASFPSGPSTPQAKGINTN 666
           +   +    P P ++P A PP         P   +   V G    P G   P        
Sbjct: 650 STAPVPWGPPVPSYSPYALPP---------PPPGSYHPVHGQHMPPYGMQYP-------- 709

Query: 667 HPNTAPIPSHQMGHRPPFSV--PSAMLPSPAHNPQGNFIAGSASTPPTPPTNTSNFTFQP 705
                P P H     PP +   PS+  P  +  P     +G+A++   P    S+ T  P
Sbjct: 710 -----PPPPHVTQAPPPGTTQNPSSSEPQQSFPPGVQADSGAATSSIPPNVYGSSVTAMP 768

[Close]

BLAST of Clc02G25270 vs. TAIR 10
Match: AT5G51300.3 (splicing factor-related )

HSP 1 Score: 49.7 bits (117), Expect = 1.3e-05
Identity = 174/732 (23.77%), Postives = 266/732 (36.34%), Query Frame = 0


Query: 67  NESANGENDKQT---QRNTKWG----------PDLTQDTA---VRKGRLIAYQTRLEQIV 126
           N SA G  D  T   +R ++W           PD  +D          + A  +RL +I 
Sbjct: 110 NPSAEGGTDSGTGTRKRKSRWADDEPRTQIQLPDFMKDFTGGIEFDPEIQALNSRLLEIS 169

Query: 127 ELLKSGTLEVPKTQDSTLEGENVQDCSP-----GPQANNR-MLYNELLELEKREVIGEIL 186
            +L+SG        D   EG+      P     G + N R     E L  E++E+I +I+
Sbjct: 170 RMLQSG-----MPLDDRPEGQRSPSPEPVYDNMGIRINTREYRARERLNRERQEIIAQII 229

Query: 187 KLNPSYKAPPDYRPLLKEDRLPLPFKVLQYIGDFAQSFIEFPPRPVKEYPGFNFIGLIYG 246
           K NP++K P DYRP     +L                FI     P+KE+PG+NFIGLI G
Sbjct: 230 KKNPAFKPPADYRPPKLHKKL----------------FI-----PMKEFPGYNFIGLIIG 289

Query: 247 PNGENQKRLEKETGAKIRICG---IKAGTGEKVIPLTKKVITMDEIKPTDVHRIHNAYEE 306
           P G  QKR+E+ETGAKI I G   +K G  ++     KK +  D           +  E+
Sbjct: 290 PRGNTQKRMERETGAKIVIRGKGSVKEGRHQQ-----KKDLKYDP----------SENED 349

Query: 307 LYVYMSADTFDKIDAAISVIELLITSIS--------GNLATGSTSSDFLSTEE------- 366
           L+V + A+T + ++AA  ++E L+  +           L   +T +  +  EE       
Sbjct: 350 LHVLVEAETQEALEAAAGMVEKLLQPVDEVLNEHKRQQLRELATLNGTIRDEEFCRLCGE 409

Query: 367 -----SSCSRAEGTIVSDM-------GQTP---MPNQGV----MQQGQVYTPTSLQGQFH 426
                 +C     T  SD+       G  P    P +G     M          L G   
Sbjct: 410 PGHRQYACPSRTNTFKSDVLCKICGDGGHPTIDCPVKGTTGKKMDDEYQNFLAELGGTVP 469

Query: 427 YPNTWPSHNLTPSPGFISPQNPPPSIINNPIHLSTPSSNISNVPSSFVRPPATVAFNPAF 486
             +   S  L   PG  S  NPP +  NN  + ++    + + P+   +PP+        
Sbjct: 470 ESSLKQSATLALGPG-SSGSNPPWA--NNAGNGASAHPGLGSTPT---KPPSKEYDETNL 529

Query: 487 RGPPVPPPRQQLHAQDLQQPF-MTQPSHVSQPRLHALT----------IQRPSLVPPNVS 546
               +PP  +     +L   F     + V + R+  L+          +Q  +     ++
Sbjct: 530 YIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKGYGFVKYADVQMANTAVQAMN 589

Query: 547 NPNFNG-------SGQLPSGLLPNMPGSSLPQLVPSSIPPGSRPDFSGPAAGSSASMGAN 606
              F G       +G+ P  + P  PG   PQ      PP ++P  + P+     + G  
Sbjct: 590 GYRFEGRTLAVRIAGKSPPPIAP--PGPPAPQPPTQGYPPSNQPPGAYPS--QQYATGGY 649

Query: 607 NMGQMALSLPRP-FAPRAAPPLGVNSSGAVPTNTAVANVDGYASFPSGPSTPQAKGINTN 666
           +   +    P P ++P A PP         P   +   V G    P G   P        
Sbjct: 650 STAPVPWGPPVPSYSPYALPP---------PPPGSYHPVHGQHMPPYGMQYP-------- 709

Query: 667 HPNTAPIPSHQMGHRPPFSV--PSAMLPSPAHNPQGNFIAGSASTPPTPPTNTSNFTFQP 705
                P P H     PP +   PS+  P  +  P     +G+A++   P    S+ T  P
Sbjct: 710 -----PPPPHVTQAPPPGTTQNPSSSEPQQSFPPGVQADSGAATSSIPPNVYGSSVTAMP 768

The following BLAST results are available for this feature:

BLAST of Clc02G25270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901344.1	0.0e+00	83.85	branchpoint-bridging protein isoform X1 [Benincasa hispida]	[more]
XP_004142248.1	0.0e+00	83.17	branchpoint-bridging protein isoform X1 [Cucumis sativus]	[more]
XP_008449795.1	0.0e+00	82.57	PREDICTED: splicing factor 1 isoform X1 [Cucumis melo] >TYK21680.1 splicing fact...	[more]
KAA0040057.1	0.0e+00	82.47	splicing factor 1 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_011653559.1	0.0e+00	80.41	branchpoint-bridging protein isoform X2 [Cucumis sativus] >KGN54081.1 hypothetic...	[more]

BLAST of Clc02G25270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54BM5	4.9e-13	30.54	Branchpoint-bridging protein OS=Dictyostelium discoideum OX=44689 GN=sf1 PE=3 SV...	[more]
Q750X2	2.1e-08	25.05	Branchpoint-bridging protein OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 ...	[more]
Q64213	5.3e-07	23.13	Splicing factor 1 OS=Mus musculus OX=10090 GN=Sf1 PE=1 SV=6	[more]
O74555	2.2e-05	22.49	Branchpoint-bridging protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
Q15637	1.1e-04	22.07	Splicing factor 1 OS=Homo sapiens OX=9606 GN=SF1 PE=1 SV=4	[more]

BLAST of Clc02G25270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DE05	0.0e+00	82.57	Splicing factor 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3BNI1	0.0e+00	82.57	splicing factor 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491578 PE=4 SV=1	[more]
A0A5A7TEU0	0.0e+00	82.47	Splicing factor 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A0A0L1R9	0.0e+00	80.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G280580 PE=4 SV=1	[more]
A0A1S3BNT5	0.0e+00	79.69	branchpoint-bridging protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491578 ...	[more]

BLAST of Clc02G25270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G32940.1	1.0e-58	34.44	RNA-binding KH domain-containing protein	[more]
AT5G51300.1	1.3e-05	23.77	splicing factor-related	[more]
AT5G51300.2	1.3e-05	23.77	splicing factor-related	[more]
AT5G51300.3	1.3e-05	23.77	splicing factor-related	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 217..248 e-value: 6.8E-5 score: 22.6
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 207..316 e-value: 1.0E-19 score: 72.2
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 203..311
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 470..526
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 749..827
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 784..827
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 470..505
None	No IPR available	PANTHER	PTHR11208:SF98	RNA-BINDING KH DOMAIN-CONTAINING PROTEIN	coord: 209..820
None	No IPR available	PANTHER	PTHR11208:SF98	RNA-BINDING KH DOMAIN-CONTAINING PROTEIN	coord: 26..190
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 217..243 score: 8.680435
IPR045071	KH domain-containing BBP-like	PANTHER	PTHR11208	RNA-BINDING PROTEIN RELATED	coord: 209..820
IPR045071	KH domain-containing BBP-like	PANTHER	PTHR11208	RNA-BINDING PROTEIN RELATED	coord: 26..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G25270.2	Clc02G25270.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048024	regulation of mRNA splicing, via spliceosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003723	RNA binding