Clc02G24700 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G24700
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	pre-mRNA-splicing factor CWC22 homolog
Location	ClcChr02: 36502544 .. 36509463 (+)
RNA-Seq Expression	Clc02G24700
Synteny	Clc02G24700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATCTCGTTCGCGAGCCCAGCCACGTTCTCTCCCTCCGCTCATCTCTCCTGCTTCTCGTGTTTCTCTTCCAGCCACCGCACGCTGCCGCTCCGATCCAACTTCCTTCGACGCCGCCGCCGTCAACGCACTTTACAGGAGAAGACTCGCGTTGATTTTGCGCGGTCTGCTAACCCAACGCCGCGTCAAACCCCCGTCCAGCCCAGGTGTCGACGCTACTTCTATCAGCAGCCACAGTCCTTCATTTGTGAGCAATCGAGTTACTTTGCTTCTTCGAACCTTTCTCTATCAATTTAAGCGAGTTTTAGGGGCGATCTTGTTCAACGGCTCTTTAGGTAACTCCATTTCATTACGATTTTACAGGAATCTCATTTCCTTCTGTTTAATTTATATGAATTGTTTAGGTTGGGGGCTAAGGACGTTCTAAAACAAGCTAGTTCATTGTCAGAATTGCTTTAAAATTGCTTCTAAATTAAGTGGCAGTACTAATGGAAAGCCTTTGGCTTGTTTGGACACTGTTTATGCTGTGTGAACATTGAATTTATTGTGTGTTCTGTGTTATGTGCCGTGAACATTGAATTTGTTAATATGTGTATTTTGGTAATGTGGCGTGGATGGTTGATGTGCTGGATGTCTGAATTATGTGACTTGGATGCAAAGGACGAGTGTTCTCAATTATGTGCTTCGGGTGTTGAATTTGTTGATATGTGATCAGATTATGTGGTGTGGATGTTAGATATCTGAATCACATTACTTGTTTGTGGTTTGAGTGCCTAGAGGCACATGTATGTGGACGAGACTTTTGTTTAGGTTGTAAGTACGTGGAAAATGGTGAGTTATGAGACCTCATTTTAGTTCTGCTTAAAGTGTGTTTAATGTAATAACTATTGAAGACCATGTGAATGTAATTAGATCGAGTAGGAGGTTGAGTGGTAATTGGCTTTAGGGACTGGGTGCCAACTACCATTTGTCAATGTAGAGTTCTACTAGAGGTCACTTATGCACCATCAGAGAGCTGGTAACTAAATGTTTACAATTATGAATGAGGCACCTTGGTAGATGAGACTTGGCTCCCGCTCAGCTAACTAGGTGCCATAGTTGGAGTAAAGTCTCCTAGGATTCTTTTACCAACAAGTTGGCATAGTTTATTAAGATGGTTTATTTGTCCACTTTGGCTAAATGAGAAGTTTTGACTGAAATGTTTTAGGTCCCACATAGTTACGTCGCTAGGTGCATGTTTTGCTCATGTATGCTTGTCTGACTCTGTTGGTTAGGATTTTTTCAGGATGTTGCTGTGTTTGCAATTGCTTTTTTAAGAACAAAACCTAGAACTATTTTATATTTGTTTTATATGGGATCCCAACAAAAAAGAGGTGCTTTAGTTTGTTTTGAAAATATTTATAGGTATGTACACTTTGTTATACTTATAGGAAATAAAGTTGGTACTTTATTTGCACTTCTTCATCATGCATGTAGCAGCGACTCTGGTTTAAGGTCTTAGGGTGTCGAGTTGTTACATTTTCATTATTGTTTGCCCTTGGGTTGGGCTGTTGTAATATACTTTAGTTTATTTATTGATTTGAGAACTAGTTGAGTTTGGTTTTAATTTGGTAAATATGTTCTTTCATCATGCGTTATAAGATGAGCTTGGTTTTTTGTTGATTCGAAGTTTTTACGCAAAGTTTGATTTGTAATGTTTATCAGGATTTATGAAAAGGGTAGTTAGATAGCGTACTCCATGTTTTAGGATAAATTTTGAGGGCTTTACACTGCTTTGTTTGATATGCATCTTTCCTAGAAATCTTACTAAAGAGCCCTCCTGCTAATTAGTACTTTCTTTTTTTTGGTCTTACAGGGATTGGATTTTAGTTTGGTGCTGAAAAGAAATTTGTGCTTTAGAGCCGTTTAAATTTTCTTGCGGTGCTGGTATGGATAGGAAGTATAGCAGAGAGTCGTCAGATGAGGATGAAGTGAAAAAGAACAGGAGAATAAGCAGAGACGAAAACAGGCAAGGTAGAGACAATAGCCATCAGGACAAAAATTTGCACAGAGAACTAGAGAGGGGAGACAAGAAAAAATCACATCAAAGTTCTGATGAAGAAGAACAAAGGACTGAGAGAAACAAAAATAGACATGATAGAGACAGAAGGCATCATGGTGAAAATCGCCATAGTAGAGGACAAGAGAGAGAAGACCGAAAAGAATCACATCAAAGTTCTGATGAAGATGAACAGAGGACTGAGAGAAACAAAAATAGACATGATAGAGACAGAAGGCATCATGGTGAAAATCACCATAGTAGAGGACAAGAGAGAGAAGACCGAAAAGAATCACATCAAAGTTCTGATGAAGATGAACAAAGGACTGGGAGAAACAAAAATAGACATGATAGAGACAGAAGGCATCATGGTGAAAATCGCCATAGTAGAGGACAAGAGAGAGAGGACCGAAAAGAAGCACATCAAAGTTCTGGTGAAGATGAACAGAGGACTGAGAGAAACAAAAATAGACATGATAGAGACAGAAGGCATCATCGTGAAAATTGCCATGGTAGAGGACAAGAGAGAGAAGACTGTAAAGAATCATATCAAAGTTCTGATGAAGATGAGTGGAAGAATAGGAGGCACAACCGTAGACAACGTGAAACTGAAACTGAAAATAAAAATTTGGATCACCATTTGCATCGTGATTCAAAAGATGAGCGTGACAAGGAATTGCGTAGAAAATCAGAACATCGGAGGAATTCGACTGACAATGATAGGGAGAGAAAGCATTCAAAACATGATTACAAGTACGGAAATTCTCAAGATCAACTAGATAAGGAGGTGAGTGGACGGAGAGAGGATAGAAGAAACATTGGGGAGAAAGAAAAGGTGAGTACAGGGACTATTGACCATCTACAATCTCGCAGACTGGAAAAACAGCCTGAAAACAATTTGAATCCTGATTCTTCAAATTTGGGAAAGAGTGGGGGTGTTTATATTCCACCATTTAAGTTGGCCAGAATGATGAAGGAGGTTCAAGATAAGAGCAGCATTGAGTATCAACGTTTGACATGGGATGCACTCCGAAAAAGTATTAATGGTCTTGTCAACAAGGTCAATGCTACTAATATAAAGAATATCATTCCAGAGTTATTTGCAGAGAACTTGATCAGGGGAAGGGGTCTATTTTGCCGTTCATGTATGAAGTCACAAATGGCATCTCCAGGGTTTACCGATGTATTTGCTGCACTTGTTGCTGTTGTGAATACTAAGTTTCCGGAAGTGGGTGATCTTCTATTGAGAAGAATTGTGTTGCAGCTCAAAAGAGCATATAAACGGAATGACAAGGTAATATTACATGATGTTTGTAATTTATATAATTTTTCCTATTTAGTTGCAAAACCTTCCATGTTATCTTTCATTTATTTATTTATTTAATTTTTTTTTCTCCTGATCCTCATTGCTTGTATTTATCTTTGACAGCCTCAACTGCTTGCTGCCGTGAAATTTATAGCGCATTTAGTTAATCAGCAGGTGGCTCATGAAATAATTGCATTAGAATTACTCACTGTGTTGCTGGAGAATCCTACAGATGACAGCGTGGAGGTGGCCGTCGGTTTTGTAACTGAATGTGGATCAATACTCAAGGATCTTTCCCCTAAGGGGCTTCATGGTGCGTATGCCCTTGTCATAAATTATGCAAATTGATTTATTGTATCTGCATTTAGGCAGTGCTCAATCATTTTAATTCACCGTGTTCACTGCTTTTTGTTTGCATGGATCTGTGTCATGAAATTATCATTGTCTAGCTATGCCATTCTGTTTGGCTTTCTGGAAAAGCTTACACCATCTGCCGCAGATTATCATCTTTGAAGTTGCTTCCATATAGGGATGAGTTCATTGAATATTTTTGCACTTCCTATCATCTGAAAAATAAAATTGTTATTTATTTTAGTTTTTAGAACTCAAGGACATTGTTCACCCTATAGAATAGATCTTGTTTGATCAAGTTTTATTAATTTATAGTCTTATTATTTTAAAAAATAAAAATTCCCCATATGATCCTCACCTATTTAACTCCAAGATTGTAATCCACGTTTCTGTCATGTTTATTCGTTGATTGTAGGAATATTTGAACGTTTCCGTGGAATTCTTCATGAAGGGGAAATAGACAAAAGGGTTCAGTTTCTAATTGAAGGCCTATTTGCAATAAGGAAAGCAAAGTTTGAGGTATAGTCTGTAAATGTCACGATGGGATGAAGTCTTAAATAATTAATCGTTTTAGCAATGAATCATTTGCCTTTTAATGCACAGCACTTACCTTTTCAGTTGGTTTCCATATATATGATTATAAAATCTACCGCAGCTGGTTAGTTTCCTTGTTTTTTATTTGTTGCCTTTTCTGTTAGAGTACCGGGGGGTTATTTCTTTCATATTAACATTGTGTGACTTTAAATTTTAAATTTCACCTTTTGCAATGTACCCGCAAATGTAGAGTCTGATATTTCCTTGTATAGCATCAACGATCTTGTATTTTCATTTTCATTTTTCTCCCTTTTGGATTTGATTCAGGGCTATCCAGCTGTTCGTCCAGAACTGGACCTTGTAGAGCAAGAAGATCAGTTAACTCATGAAATCTCTTTGCAAGAAGAGATAGATCCTGAGATTGCTCTTGGTAATCTTTTTCCCTTTAAATAAAAAATAAAATAAAAACTTGTGCATGTTTTATGAGTTGATCAAAGTAGGTCTTCTTATGATGTTTGTTTTATTTTTTCCACTTTTATATTTTCCTGTCTTGTTTCCAGATATCTTCAAGTCTGATCCAAATTTCCTTGAAAATGAGAAGCGGTATGAGGATTTAAAGAAAAATATACTTGGTGAGGAATCCGAGGATGAAGAAGACCAATCTGATGGTGGATCAGATGATGAGGAGGATGAGGATGAGGAAGATGAATCTGAAGAAGAAGATGAGGAGCAGATGCAAATAAACGATGAAACAGAAACCAATCTTGTGAACCTTAGAAGAACAATTTATCTGACAATTATGTCCAGTGTAGATTTTGAAGAGGCTGGGCATAAGCTTCTAAAAATTAAACTTGAGCCTGGTCAAGAAGTAAGTTCTTTTAGTTCTTTCTGTTGCTAATACTTTTCTACTACATTGCATAGGTCGACTGCAATTTTTCTTAAAACAAAGTTAGTTTCCTGTTTTATAATAGTGTCCTGTAATATCAATGTTTGTCTTGCATGATTTTCTGTTGCATTTGGTATATTATACAAGGGGTACAAGTGTAAGTGTGTTGCTTGGTTTTCTGTGGTCTTTGCAGATAGAGTTATGCGTCATGTTATTGGAATGTTGCAGTCAGGAGAGAACTTACCTGCGATATTATGGTCTGTTAGGGCAAAGATTTTGCAAGATCAACAAAGTGTATCAGGAAAATTTTGAGAAATGCTTTGTCCAGCAATATTCAATGATTCACAGGCTTGAAACTAACAAGTTAAGAAATGTGGCTAAATTTTTTGCCCACTTACTCGGCACTGATGCTCTCCCATGGCATGTTTTGTCATACATTCGCTTGACGGAAGAAGACACCACATCGTCATCTAGGATTTTTATTAAGATCCTCTTCCAGGTATTCCTTGTCGATCCTGATCGTGATCTATATGATTGTTTTCCTTTGTTGTTAATGTTGCTATAACTTAAGATAGAGAAAGTTTGATGTTCACCGTTTTCTATTTTTCACTTGTCATGGTTGACGGTAGGTCCATCCTTTGGTAATGAATGAAACACTGTCCAGTTCCATTGTGTCTACTGGTGACTAACGTACCAATTATCATCTATTTCTCATCAATAACAATACAAATGCTGTTTTTTTTGTTTTAAACAAATTTATTTTTATTTTTATAAATATAATGGTAGCTGCTGTGTCAAGATAGCAAGTAGGCATTGGAGTTGAGAAGTTTGCATTTTTAATTGCTTCGGTAGATGTTAATTTTTGTATCTTGGTGTTAATTGTGGTGCAGGAATTATCAGAACATTTGGGAATTCGATTGTTGAATGAACGTCTCACGGATCCGACAATGCAGGATTCGTTTGAATCCATATTCCCTAGGGATAACCCAAAGAACACAAGATTTTCCATCAACTTCTTCACGTCTATTGGGCTTGGTGGTTTGACAGAGAATTTGCGAGAGTATTTGAAGAATATGCCCCGGCTAATCATGCAACAGCAAAAACCAGTATCAGACTCCGATGAGGAATCTCAAAGCTCCGGTTCTTCAGATTCAGATTCAGACTCAAGTACTTCAGAGTCAGAATCAGATTCAGATGAAAGTGAAGGCGAAGATAGGAGACGTGGAAAAAAGAGAAGAAAAACCGGAAGGTGATATCAATATGGTTGTATATTTTCTCCAATAACTCTTTGCAAGATGATTTATCTTCCTGCTTCCTAGGTGTTGTATTGTAATAACCTTTTGATTGTTTATATGCAAATTTTGGCCCTCTAACGACTATTAGTTGTTTTCATCCCCGAAATTGTTGTTAGATTAATCAGAAGGTGTCTGGATTTTTACTTCCCAAATTGAATACAATCAATGATGAGATAAGATGAGATCCACATTGTTCAACTCCAGGTCCAACGGAGGTGTTGCTGTTCACGATTGTTATTATATAATTTGAGCTATATAATTCCGTTACCAAATATCTGATGTTAAGATGTGCATTTTCATTTCTTGAGAGCTTAAGATAAAACATCTTTGCTTGAAAGCAAAAAAAGAAGCTAAGTGAGTAGCTAAAGGCAGGATTCTGATTCGTTTAGAAGTGTTTCAAATCCAAATGATAATGCTTCTCAACTACCTACTTTATCAAAATAGCTTAAACATACACATCTACATTCGTGTACTCCAACGTTTGTATAAAACTCTATTTTTATTAATTGAC

mRNA sequence

TTATCTCGTTCGCGAGCCCAGCCACGTTCTCTCCCTCCGCTCATCTCTCCTGCTTCTCGTGTTTCTCTTCCAGCCACCGCACGCTGCCGCTCCGATCCAACTTCCTTCGACGCCGCCGCCGTCAACGCACTTTACAGGAGAAGACTCGCGTTGATTTTGCGCGGTCTGCTAACCCAACGCCGCGTCAAACCCCCGTCCAGCCCAGGTGTCGACGCTACTTCTATCAGCAGCCACAGTCCTTCATTTGTGAGCAATCGAGTTACTTTGCTTCTTCGAACCTTTCTCTATCAATTTAAGCGAGTTTTAGGGGCGATCTTGTTCAACGGCTCTTTAGGGATTGGATTTTAGTTTGGTGCTGAAAAGAAATTTGTGCTTTAGAGCCGTTTAAATTTTCTTGCGGTGCTGGTATGGATAGGAAGTATAGCAGAGAGTCGTCAGATGAGGATGAAGTGAAAAAGAACAGGAGAATAAGCAGAGACGAAAACAGGCAAGGTAGAGACAATAGCCATCAGGACAAAAATTTGCACAGAGAACTAGAGAGGGGAGACAAGAAAAAATCACATCAAAGTTCTGATGAAGAAGAACAAAGGACTGAGAGAAACAAAAATAGACATGATAGAGACAGAAGGCATCATGGTGAAAATCGCCATAGTAGAGGACAAGAGAGAGAAGACCGAAAAGAATCACATCAAAGTTCTGATGAAGATGAACAGAGGACTGAGAGAAACAAAAATAGACATGATAGAGACAGAAGGCATCATGGTGAAAATCACCATAGTAGAGGACAAGAGAGAGAAGACCGAAAAGAATCACATCAAAGTTCTGATGAAGATGAACAAAGGACTGGGAGAAACAAAAATAGACATGATAGAGACAGAAGGCATCATGGTGAAAATCGCCATAGTAGAGGACAAGAGAGAGAGGACCGAAAAGAAGCACATCAAAGTTCTGGTGAAGATGAACAGAGGACTGAGAGAAACAAAAATAGACATGATAGAGACAGAAGGCATCATCGTGAAAATTGCCATGGTAGAGGACAAGAGAGAGAAGACTGTAAAGAATCATATCAAAGTTCTGATGAAGATGAGTGGAAGAATAGGAGGCACAACCGTAGACAACGTGAAACTGAAACTGAAAATAAAAATTTGGATCACCATTTGCATCGTGATTCAAAAGATGAGCGTGACAAGGAATTGCGTAGAAAATCAGAACATCGGAGGAATTCGACTGACAATGATAGGGAGAGAAAGCATTCAAAACATGATTACAAGTACGGAAATTCTCAAGATCAACTAGATAAGGAGGTGAGTGGACGGAGAGAGGATAGAAGAAACATTGGGGAGAAAGAAAAGGTGAGTACAGGGACTATTGACCATCTACAATCTCGCAGACTGGAAAAACAGCCTGAAAACAATTTGAATCCTGATTCTTCAAATTTGGGAAAGAGTGGGGGTGTTTATATTCCACCATTTAAGTTGGCCAGAATGATGAAGGAGGTTCAAGATAAGAGCAGCATTGAGTATCAACGTTTGACATGGGATGCACTCCGAAAAAGTATTAATGGTCTTGTCAACAAGGTCAATGCTACTAATATAAAGAATATCATTCCAGAGTTATTTGCAGAGAACTTGATCAGGGGAAGGGGTCTATTTTGCCGTTCATGTATGAAGTCACAAATGGCATCTCCAGGGTTTACCGATGTATTTGCTGCACTTGTTGCTGTTGTGAATACTAAGTTTCCGGAAGTGGGTGATCTTCTATTGAGAAGAATTGTGTTGCAGCTCAAAAGAGCATATAAACGGAATGACAAGCCTCAACTGCTTGCTGCCGTGAAATTTATAGCGCATTTAGTTAATCAGCAGGTGGCTCATGAAATAATTGCATTAGAATTACTCACTGTGTTGCTGGAGAATCCTACAGATGACAGCGTGGAGGTGGCCGTCGGTTTTGTAACTGAATGTGGATCAATACTCAAGGATCTTTCCCCTAAGGGGCTTCATGGAATATTTGAACGTTTCCGTGGAATTCTTCATGAAGGGGAAATAGACAAAAGGGTTCAGTTTCTAATTGAAGGCCTATTTGCAATAAGGAAAGCAAAGTTTGAGGGCTATCCAGCTGTTCGTCCAGAACTGGACCTTGTAGAGCAAGAAGATCAGTTAACTCATGAAATCTCTTTGCAAGAAGAGATAGATCCTGAGATTGCTCTTGATATCTTCAAGTCTGATCCAAATTTCCTTGAAAATGAGAAGCGGTATGAGGATTTAAAGAAAAATATACTTGGTGAGGAATCCGAGGATGAAGAAGACCAATCTGATGGTGGATCAGATGATGAGGAGGATGAGGATGAGGAAGATGAATCTGAAGAAGAAGATGAGGAGCAGATGCAAATAAACGATGAAACAGAAACCAATCTTGTGAACCTTAGAAGAACAATTTATCTGACAATTATGTCCAGTGTAGATTTTGAAGAGGCTGGGCATAAGCTTCTAAAAATTAAACTTGAGCCTGGTCAAGAAATAGAGTTATGCGTCATGTTATTGGAATGTTGCAGTCAGGAGAGAACTTACCTGCGATATTATGGTCTGTTAGGGCAAAGATTTTGCAAGATCAACAAAGTGTATCAGGAAAATTTTGAGAAATGCTTTGTCCAGCAATATTCAATGATTCACAGGCTTGAAACTAACAAGTTAAGAAATGTGGCTAAATTTTTTGCCCACTTACTCGGCACTGATGCTCTCCCATGGCATGTTTTGTCATACATTCGCTTGACGGAAGAAGACACCACATCGTCATCTAGGATTTTTATTAAGATCCTCTTCCAGGAATTATCAGAACATTTGGGAATTCGATTGTTGAATGAACGTCTCACGGATCCGACAATGCAGGATTCGTTTGAATCCATATTCCCTAGGGATAACCCAAAGAACACAAGATTTTCCATCAACTTCTTCACGTCTATTGGGCTTGGTGGTTTGACAGAGAATTTGCGAGAGTATTTGAAGAATATGCCCCGGCTAATCATGCAACAGCAAAAACCAGTATCAGACTCCGATGAGGAATCTCAAAGCTCCGGTTCTTCAGATTCAGATTCAGACTCAAGTACTTCAGAGTCAGAATCAGATTCAGATGAAAGTGAAGGCGAAGATAGGAGACGTGGAAAAAAGAGAAGAAAAACCGGAAGGTGATATCAATATGGTTGTATATTTTCTCCAATAACTCTTTGCAAGATGATTTATCTTCCTGCTTCCTAGGTGTTGTATTGTAATAACCTTTTGATTGTTTATATGCAAATTTTGGCCCTCTAACGACTATTAGTTGTTTTCATCCCCGAAATTGTTGTTAGATTAATCAGAAGGTGTCTGGATTTTTACTTCCCAAATTGAATACAATCAATGATGAGATAAGATGAGATCCACATTGTTCAACTCCAGGTCCAACGGAGGTGTTGCTGTTCACGATTGTTATTATATAATTTGAGCTATATAATTCCGTTACCAAATATCTGATGTTAAGATGTGCATTTTCATTTCTTGAGAGCTTAAGATAAAACATCTTTGCTTGAAAGCAAAAAAAGAAGCTAAGTGAGTAGCTAAAGGCAGGATTCTGATTCGTTTAGAAGTGTTTCAAATCCAAATGATAATGCTTCTCAACTACCTACTTTATCAAAATAGCTTAAACATACACATCTACATTCGTGTACTCCAACGTTTGTATAAAACTCTATTTTTATTAATTGAC

Coding sequence (CDS)

ATGGATAGGAAGTATAGCAGAGAGTCGTCAGATGAGGATGAAGTGAAAAAGAACAGGAGAATAAGCAGAGACGAAAACAGGCAAGGTAGAGACAATAGCCATCAGGACAAAAATTTGCACAGAGAACTAGAGAGGGGAGACAAGAAAAAATCACATCAAAGTTCTGATGAAGAAGAACAAAGGACTGAGAGAAACAAAAATAGACATGATAGAGACAGAAGGCATCATGGTGAAAATCGCCATAGTAGAGGACAAGAGAGAGAAGACCGAAAAGAATCACATCAAAGTTCTGATGAAGATGAACAGAGGACTGAGAGAAACAAAAATAGACATGATAGAGACAGAAGGCATCATGGTGAAAATCACCATAGTAGAGGACAAGAGAGAGAAGACCGAAAAGAATCACATCAAAGTTCTGATGAAGATGAACAAAGGACTGGGAGAAACAAAAATAGACATGATAGAGACAGAAGGCATCATGGTGAAAATCGCCATAGTAGAGGACAAGAGAGAGAGGACCGAAAAGAAGCACATCAAAGTTCTGGTGAAGATGAACAGAGGACTGAGAGAAACAAAAATAGACATGATAGAGACAGAAGGCATCATCGTGAAAATTGCCATGGTAGAGGACAAGAGAGAGAAGACTGTAAAGAATCATATCAAAGTTCTGATGAAGATGAGTGGAAGAATAGGAGGCACAACCGTAGACAACGTGAAACTGAAACTGAAAATAAAAATTTGGATCACCATTTGCATCGTGATTCAAAAGATGAGCGTGACAAGGAATTGCGTAGAAAATCAGAACATCGGAGGAATTCGACTGACAATGATAGGGAGAGAAAGCATTCAAAACATGATTACAAGTACGGAAATTCTCAAGATCAACTAGATAAGGAGGTGAGTGGACGGAGAGAGGATAGAAGAAACATTGGGGAGAAAGAAAAGGTGAGTACAGGGACTATTGACCATCTACAATCTCGCAGACTGGAAAAACAGCCTGAAAACAATTTGAATCCTGATTCTTCAAATTTGGGAAAGAGTGGGGGTGTTTATATTCCACCATTTAAGTTGGCCAGAATGATGAAGGAGGTTCAAGATAAGAGCAGCATTGAGTATCAACGTTTGACATGGGATGCACTCCGAAAAAGTATTAATGGTCTTGTCAACAAGGTCAATGCTACTAATATAAAGAATATCATTCCAGAGTTATTTGCAGAGAACTTGATCAGGGGAAGGGGTCTATTTTGCCGTTCATGTATGAAGTCACAAATGGCATCTCCAGGGTTTACCGATGTATTTGCTGCACTTGTTGCTGTTGTGAATACTAAGTTTCCGGAAGTGGGTGATCTTCTATTGAGAAGAATTGTGTTGCAGCTCAAAAGAGCATATAAACGGAATGACAAGCCTCAACTGCTTGCTGCCGTGAAATTTATAGCGCATTTAGTTAATCAGCAGGTGGCTCATGAAATAATTGCATTAGAATTACTCACTGTGTTGCTGGAGAATCCTACAGATGACAGCGTGGAGGTGGCCGTCGGTTTTGTAACTGAATGTGGATCAATACTCAAGGATCTTTCCCCTAAGGGGCTTCATGGAATATTTGAACGTTTCCGTGGAATTCTTCATGAAGGGGAAATAGACAAAAGGGTTCAGTTTCTAATTGAAGGCCTATTTGCAATAAGGAAAGCAAAGTTTGAGGGCTATCCAGCTGTTCGTCCAGAACTGGACCTTGTAGAGCAAGAAGATCAGTTAACTCATGAAATCTCTTTGCAAGAAGAGATAGATCCTGAGATTGCTCTTGATATCTTCAAGTCTGATCCAAATTTCCTTGAAAATGAGAAGCGGTATGAGGATTTAAAGAAAAATATACTTGGTGAGGAATCCGAGGATGAAGAAGACCAATCTGATGGTGGATCAGATGATGAGGAGGATGAGGATGAGGAAGATGAATCTGAAGAAGAAGATGAGGAGCAGATGCAAATAAACGATGAAACAGAAACCAATCTTGTGAACCTTAGAAGAACAATTTATCTGACAATTATGTCCAGTGTAGATTTTGAAGAGGCTGGGCATAAGCTTCTAAAAATTAAACTTGAGCCTGGTCAAGAAATAGAGTTATGCGTCATGTTATTGGAATGTTGCAGTCAGGAGAGAACTTACCTGCGATATTATGGTCTGTTAGGGCAAAGATTTTGCAAGATCAACAAAGTGTATCAGGAAAATTTTGAGAAATGCTTTGTCCAGCAATATTCAATGATTCACAGGCTTGAAACTAACAAGTTAAGAAATGTGGCTAAATTTTTTGCCCACTTACTCGGCACTGATGCTCTCCCATGGCATGTTTTGTCATACATTCGCTTGACGGAAGAAGACACCACATCGTCATCTAGGATTTTTATTAAGATCCTCTTCCAGGAATTATCAGAACATTTGGGAATTCGATTGTTGAATGAACGTCTCACGGATCCGACAATGCAGGATTCGTTTGAATCCATATTCCCTAGGGATAACCCAAAGAACACAAGATTTTCCATCAACTTCTTCACGTCTATTGGGCTTGGTGGTTTGACAGAGAATTTGCGAGAGTATTTGAAGAATATGCCCCGGCTAATCATGCAACAGCAAAAACCAGTATCAGACTCCGATGAGGAATCTCAAAGCTCCGGTTCTTCAGATTCAGATTCAGACTCAAGTACTTCAGAGTCAGAATCAGATTCAGATGAAAGTGAAGGCGAAGATAGGAGACGTGGAAAAAAGAGAAGAAAAACCGGAAGGTGA

Protein sequence

MDRKYSRESSDEDEVKKNRRISRDENRQGRDNSHQDKNLHRELERGDKKKSHQSSDEEEQRTERNKNRHDRDRRHHGENRHSRGQEREDRKESHQSSDEDEQRTERNKNRHDRDRRHHGENHHSRGQEREDRKESHQSSDEDEQRTGRNKNRHDRDRRHHGENRHSRGQEREDRKEAHQSSGEDEQRTERNKNRHDRDRRHHRENCHGRGQEREDCKESYQSSDEDEWKNRRHNRRQRETETENKNLDHHLHRDSKDERDKELRRKSEHRRNSTDNDRERKHSKHDYKYGNSQDQLDKEVSGRREDRRNIGEKEKVSTGTIDHLQSRRLEKQPENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKKNILGEESEDEEDQSDGGSDDEEDEDEEDESEEEDEEQMQINDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYLKNMPRLIMQQQKPVSDSDEESQSSGSSDSDSDSSTSESESDSDESEGEDRRRGKKRRKTGR

Homology

[Close]

BLAST of Clc02G24700 vs. NCBI nr
Match: XP_038900963.1 (pre-mRNA-splicing factor CWC22 homolog [Benincasa hispida] >XP_038900964.1 pre-mRNA-splicing factor CWC22 homolog [Benincasa hispida])

HSP 1 Score: 1325.8 bits (3430), Expect = 0.0e+00
Identity = 733/799 (91.74%), Postives = 757/799 (94.74%), Query Frame = 0


Query: 131 DRKESHQSSDEDE----QRTGRNKNRHDRDRRHHGENRHSRGQEREDRKEAHQSSGEDEQ 190
           DRK S +SSDEDE    +R  R+KNR  RD+ H  +N H R  +R D+K+++QS  EDEQ
Sbjct: 2   DRKYSRESSDEDEVKKDRRISRDKNRQGRDKSHQDKNLH-RELDRVDKKKSYQSFDEDEQ 61

Query: 191 RTERNKNRHDRDRRHHRENCHGRGQEREDCKESYQSSDEDEWKNRRHNRRQRETETENKN 250
           RTERN+NRHDRDR+HH EN H RGQERE+ KESYQSSDEDEWKNRRH+RR+RETE ENKN
Sbjct: 62  RTERNRNRHDRDRKHHGENRHSRGQERENRKESYQSSDEDEWKNRRHDRRERETENENKN 121

Query: 251 LDHHLHRDSKDERDKELRRKSEHRRNSTDNDRERKHSKHDYKYGNSQDQLDKEVSGRRED 310
           +D HLH DSKDERDKEL RKSEHRRN TDNDRERKHSKHDYKY NSQDQ DKEVSG RED
Sbjct: 122 MDRHLHHDSKDERDKELSRKSEHRRNWTDNDRERKHSKHDYKYSNSQDQRDKEVSGWRED 181

Query: 311 RRNIGEKEKVSTGTIDHLQSRRLEKQPENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQD 370
           RRNIGEKEKV TGTID LQ  R +KQ ENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQD
Sbjct: 182 RRNIGEKEKVGTGTIDPLQPPRQDKQSENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQD 241

Query: 371 KSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMAS 430
           KSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELF ENLIRGRGLFCRSCMKSQMAS
Sbjct: 242 KSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFGENLIRGRGLFCRSCMKSQMAS 301

Query: 431 PGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQV 490
           PGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQV
Sbjct: 302 PGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQV 361

Query: 491 AHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEI 550
           AHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEI
Sbjct: 362 AHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEI 421

Query: 551 DKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSD 610
           DKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSD
Sbjct: 422 DKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSD 481

Query: 611 PNFLENEKRYEDLKKNILGEESEDEEDQSDGGSDDEEDEDEEDESEEEDEEQMQINDETE 670
           PNFLENEKRYEDLKKNILGEES+DEED+SD GSDDEEDED+EDESEEEDEEQMQINDETE
Sbjct: 482 PNFLENEKRYEDLKKNILGEESDDEEDRSDAGSDDEEDEDDEDESEEEDEEQMQINDETE 541

Query: 671 TNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGL 730
           TNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGL
Sbjct: 542 TNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGL 601

Query: 731 LGQRFCKINKVYQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIR 790
           LGQRFCKINKVYQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIR
Sbjct: 602 LGQRFCKINKVYQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIR 661

Query: 791 LTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSIN 850
           LTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSIN
Sbjct: 662 LTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSIN 721

Query: 851 FFTSIGLGGLTENLREYLKNMPRLIMQQQKPVSDSDEESQSSGSSDSDSDSSTSESESDS 910
           FFTSIGLGGLTENLREYLKNMPRLIMQQQKP+SDSDEESQSS SSDSDS+SS+SESESDS
Sbjct: 722 FFTSIGLGGLTENLREYLKNMPRLIMQQQKPMSDSDEESQSSDSSDSDSESSSSESESDS 781

Query: 911 DESEGEDRRRGKKRRKTGR 926
           +ESE EDRRRGKKRRKTGR
Sbjct: 782 EESEREDRRRGKKRRKTGR 799

[Close]

BLAST of Clc02G24700 vs. NCBI nr
Match: XP_022943731.1 (pre-mRNA-splicing factor CWC22 homolog [Cucurbita moschata])

HSP 1 Score: 1316.2 bits (3405), Expect = 0.0e+00
Identity = 775/961 (80.65%), Postives = 819/961 (85.22%), Query Frame = 0


Query: 1   MDRKYSRESSDEDEVKK----------------------------------NRRISRDEN 60
           MD KYSRESSDEDE+K+                                   R   +D++
Sbjct: 1   MDSKYSRESSDEDEMKRKTNRQPHSSRKRDRQHGHHEDDSDSSDASEGYRGRRHEKKDDD 60

Query: 61  RQGRDNSHQDKNLHRELERGDKKK--SHQSSDEEEQRTERNKNRHDRDRRHHGENRHSRG 120
           +  R + + D + H   +  D+KK  S +  DE  +R +R  N   RD+RHH  NR  R 
Sbjct: 61  QAKRISGNNDGHTHERWQNEDEKKTASQRFPDEGYKRIDRENNGQGRDKRHHDGNR-CRE 120

Query: 121 QEREDRKESHQSSDEDEQRTERNKNRHDRDRRHHGENHHSRGQEREDRKESHQSSDEDEQ 180
           QER DRKESHQS + +EQR +R+K RH+RDRRH  E H  R QER DRKESHQSSDEDE+
Sbjct: 121 QERGDRKESHQSFEAEEQRMDRDKKRHNRDRRHQSE-HRQREQERVDRKESHQSSDEDER 180

Query: 181 RTGRNKNRHDRDRRHHGENRHSRGQEREDRKEAHQSSGEDEQRTERNKNRHDRDRRHHRE 240
              + KNRHDRDRRH G+N H R   R  +KE++QS+ EDEQ T RNKNRHDRDRRH  E
Sbjct: 181 SVDKEKNRHDRDRRHRGKNPH-RELGRSGKKESYQSNDEDEQITGRNKNRHDRDRRHEDE 240

Query: 241 NCHGRGQEREDCKESYQSSDEDEWKNRRHNRRQRETETENKNLDHHLHRDSKDERDKELR 300
           N H R +ER D KE Y S DEDEWKNRRH+RRQRETE  NK  D HL  DSKDERDKEL 
Sbjct: 241 NQHSREKERGDQKELYHSYDEDEWKNRRHDRRQRETENGNKITDRHLRHDSKDERDKELH 300

Query: 301 RKSEHRRNSTDNDRERKHSKHDYKYGNSQDQLDKEVSGRREDRRNIGEKEKVSTGTIDHL 360
           RKSE RRN TDNDRERKHSKHDYK  NSQDQ DKEVSG REDRRNIG KE V TGT++HL
Sbjct: 301 RKSEDRRNWTDNDRERKHSKHDYKSSNSQDQRDKEVSGWREDRRNIGGKENVGTGTLNHL 360

Query: 361 QSRRLEKQPENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSI 420
           Q  R EKQ ENNLNPD+SNLGKSGGVYIPPFKLARMMKEV+DKSSIEYQRLTWDALRKSI
Sbjct: 361 QPHRQEKQSENNLNPDASNLGKSGGVYIPPFKLARMMKEVEDKSSIEYQRLTWDALRKSI 420

Query: 421 NGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKF 480
           NGLVNKVNATNIKNII ELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKF
Sbjct: 421 NGLVNKVNATNIKNIITELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKF 480

Query: 481 PEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPT 540
           PEVGDLLLRRI+LQLKRAYKRNDKPQLLAAVKF+AHLVNQ VAHEIIALELLTVLLENPT
Sbjct: 481 PEVGDLLLRRIILQLKRAYKRNDKPQLLAAVKFVAHLVNQLVAHEIIALELLTVLLENPT 540

Query: 541 DDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAK 600
           DDSVEVAVGFVTECGSIL DLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAK
Sbjct: 541 DDSVEVAVGFVTECGSILNDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAK 600

Query: 601 FEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKKNIL 660
           FEGYPAVRPELDLVEQEDQLTHE+SLQEEIDPEIALDIFKSDPNFLENEKRYEDLKKNIL
Sbjct: 601 FEGYPAVRPELDLVEQEDQLTHEVSLQEEIDPEIALDIFKSDPNFLENEKRYEDLKKNIL 660

Query: 661 GEESEDEEDQSDGGSDDEEDEDEEDESEEEDEEQMQINDETETNLVNLRRTIYLTIMSSV 720
           GEESEDEED+SD GSD  EDE+EEDESEEEDEEQM INDETETNLVNLRRTIYLTIMSSV
Sbjct: 661 GEESEDEEDRSDAGSD--EDEEEEDESEEEDEEQMLINDETETNLVNLRRTIYLTIMSSV 720

Query: 721 DFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFEK 780
           DFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKV+QENFEK
Sbjct: 721 DFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQENFEK 780

Query: 781 CFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILF 840
           CFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILF
Sbjct: 781 CFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILF 840

Query: 841 QELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYL 900
           QELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRF+INFFTSIGLGGLTENLREYL
Sbjct: 841 QELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFAINFFTSIGLGGLTENLREYL 900

Query: 901 KNMPRLIMQQQKPVSDSDEESQSSGSSDSDSDSSTSESESDSDESEGEDRRRGKKRRKTG 926
           KNMPRLIMQQQKPVS+SDEES SS SSDSDSDSS S   S+S+E E EDRRRGKKRRK+G
Sbjct: 901 KNMPRLIMQQQKPVSESDEESGSSDSSDSDSDSSVSSDSSESEEEE-EDRRRGKKRRKSG 955

[Close]

BLAST of Clc02G24700 vs. NCBI nr
Match: KAG7010258.1 (Pre-mRNA-splicing factor CWC22-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1313.5 bits (3398), Expect = 0.0e+00
Identity = 771/961 (80.23%), Postives = 818/961 (85.12%), Query Frame = 0


Query: 1   MDRKYSRESSDEDEVKK--NRRISRDENRQGRDNSHQDKNLHRELERGDKKKSHQSSDEE 60
           MD KYSRESSDEDE+K+  NR       R  +   H+D++   +   G + + H+  D++
Sbjct: 1   MDSKYSRESSDEDEMKRKTNRHPHSSRKRDRQHGHHEDESDSSDASEGYRGRRHEKKDDD 60

Query: 61  E----------------------------------QRTERNKNRHDRDRRHHGENRHSRG 120
           +                                  +R +R  N   RD+RHH  NR  R 
Sbjct: 61  QAKKISGNNDGHTQERWQNEDEKKTASQRFPDEGYKRIDRENNGQGRDKRHHDGNR-CRE 120

Query: 121 QEREDRKESHQSSDEDEQRTERNKNRHDRDRRHHGENHHSRGQEREDRKESHQSSDEDEQ 180
           QER D+KESHQS +E+EQR +R+K RH+RDRRH  E H  R QER DRKESHQSSDEDE+
Sbjct: 121 QERGDQKESHQSFEEEEQRMDRDKKRHNRDRRHQSE-HRQREQERVDRKESHQSSDEDER 180

Query: 181 RTGRNKNRHDRDRRHHGENRHSRGQEREDRKEAHQSSGEDEQRTERNKNRHDRDRRHHRE 240
              + KNRHDRDRRH G+N H R   R  +KE++QS+ EDE+ T RNKNRHDRDRRH  E
Sbjct: 181 SVDKEKNRHDRDRRHRGKNPH-RELGRSGKKESYQSNDEDERITGRNKNRHDRDRRHEDE 240

Query: 241 NCHGRGQEREDCKESYQSSDEDEWKNRRHNRRQRETETENKNLDHHLHRDSKDERDKELR 300
           N H R +ER D KE YQS DEDEWKNRRH+RRQRETE  NK  D HL  DSKDERDKEL 
Sbjct: 241 NQHSREKERGDQKELYQSYDEDEWKNRRHDRRQRETENGNKITDRHLRHDSKDERDKELH 300

Query: 301 RKSEHRRNSTDNDRERKHSKHDYKYGNSQDQLDKEVSGRREDRRNIGEKEKVSTGTIDHL 360
           RKSE RRN TDNDRERKHSKHDYK  NSQDQ DKEVSG REDRRNIG KE V TGT++H 
Sbjct: 301 RKSEDRRNWTDNDRERKHSKHDYKSSNSQDQRDKEVSGWREDRRNIGGKENVGTGTLNHR 360

Query: 361 QSRRLEKQPENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSI 420
           Q  R EKQ ENNLNPD+SNLGKSGGVYIPPFKLARMMKEV+DKSSIEYQRLTWDALRKSI
Sbjct: 361 QPHRQEKQSENNLNPDASNLGKSGGVYIPPFKLARMMKEVEDKSSIEYQRLTWDALRKSI 420

Query: 421 NGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKF 480
           NGLVNKVNATNIKNII ELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKF
Sbjct: 421 NGLVNKVNATNIKNIITELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKF 480

Query: 481 PEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPT 540
           PEVGDLLLRRI+LQLKRAYKRNDKPQLLAAVKF+AHLVNQ VAHEIIALELLTVLLENPT
Sbjct: 481 PEVGDLLLRRIILQLKRAYKRNDKPQLLAAVKFVAHLVNQLVAHEIIALELLTVLLENPT 540

Query: 541 DDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAK 600
           DDSVEVAVGFVTECGSIL DLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAK
Sbjct: 541 DDSVEVAVGFVTECGSILNDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAK 600

Query: 601 FEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKKNIL 660
           FEGYPAVRPELDLVEQEDQLTHE+SLQEEIDPEIALDIFKSDPNFLENEKRYEDLKKNIL
Sbjct: 601 FEGYPAVRPELDLVEQEDQLTHEVSLQEEIDPEIALDIFKSDPNFLENEKRYEDLKKNIL 660

Query: 661 GEESEDEEDQSDGGSDDEEDEDEEDESEEEDEEQMQINDETETNLVNLRRTIYLTIMSSV 720
           GEESEDEED+SD GSD  EDE+EEDESEEEDEEQM INDETETNLVNLRRTIYLTIMSSV
Sbjct: 661 GEESEDEEDRSDAGSD--EDEEEEDESEEEDEEQMLINDETETNLVNLRRTIYLTIMSSV 720

Query: 721 DFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFEK 780
           DFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKV+QENFEK
Sbjct: 721 DFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQENFEK 780

Query: 781 CFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILF 840
           CFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILF
Sbjct: 781 CFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILF 840

Query: 841 QELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYL 900
           QELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRF+INFFTSIGLGGLTENLREYL
Sbjct: 841 QELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFAINFFTSIGLGGLTENLREYL 900

Query: 901 KNMPRLIMQQQKPVSDSDEESQSSGSSDSDSDSSTSESESDSDESEGEDRRRGKKRRKTG 926
           KNMPRLIMQQQKPVS+SDEES SS SSDSDSDSS S   S+S+E E EDRRRGKKRRK+G
Sbjct: 901 KNMPRLIMQQQKPVSESDEESGSSDSSDSDSDSSVSSDSSESEEEE-EDRRRGKKRRKSG 955

[Close]

BLAST of Clc02G24700 vs. NCBI nr
Match: KAG6570382.1 (Pre-mRNA-splicing factor CWC22-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1312.7 bits (3396), Expect = 0.0e+00
Identity = 771/961 (80.23%), Postives = 818/961 (85.12%), Query Frame = 0


Query: 1    MDRKYSRESSDEDEVKK--NRRISRDENRQGRDNSHQDKNLHRELERGDKKKSHQSSDEE 60
            MD KYSRESSDEDE+K+  NR       R  +   H+D++   +   G + + H+  D++
Sbjct: 82   MDSKYSRESSDEDEMKRKTNRHPHSSRKRDRQHGHHEDESDSSDASEGYRGRRHEKKDDD 141

Query: 61   E----------------------------------QRTERNKNRHDRDRRHHGENRHSRG 120
            +                                  +R +R  N   RD+RHH  NR  R 
Sbjct: 142  QAKKISGNNDGHTQERWQNEDEKKTASQRFPDEGYKRIDRENNGQGRDKRHHDGNR-CRE 201

Query: 121  QEREDRKESHQSSDEDEQRTERNKNRHDRDRRHHGENHHSRGQEREDRKESHQSSDEDEQ 180
            QER D+KESHQS +E+EQR +R+K RH+RDRRH  E H  R QER DRKESHQSSDEDE+
Sbjct: 202  QERGDQKESHQSFEEEEQRMDRDKKRHNRDRRHQSE-HRQREQERVDRKESHQSSDEDER 261

Query: 181  RTGRNKNRHDRDRRHHGENRHSRGQEREDRKEAHQSSGEDEQRTERNKNRHDRDRRHHRE 240
               + KNRHDRDRRH G+N H R   R  +KE++QS+ EDE+ T RNKNRHDRDRRH  E
Sbjct: 262  SVDKEKNRHDRDRRHRGKNPH-RELGRSGKKESYQSNDEDERITGRNKNRHDRDRRHEDE 321

Query: 241  NCHGRGQEREDCKESYQSSDEDEWKNRRHNRRQRETETENKNLDHHLHRDSKDERDKELR 300
            N H R +ER D KE YQS DEDEWKNRRH+RRQRETE  NK  D HL  DSKDERDKEL 
Sbjct: 322  NQHSREKERGDQKELYQSYDEDEWKNRRHDRRQRETENGNKITDRHLRHDSKDERDKELH 381

Query: 301  RKSEHRRNSTDNDRERKHSKHDYKYGNSQDQLDKEVSGRREDRRNIGEKEKVSTGTIDHL 360
            RKSE RRN TDNDRERKHSKHDYK  NSQDQ DKEVSG REDRRNIG KE V TGT++HL
Sbjct: 382  RKSEDRRNWTDNDRERKHSKHDYKSSNSQDQRDKEVSGWREDRRNIGGKENVGTGTLNHL 441

Query: 361  QSRRLEKQPENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSI 420
            Q  R EKQ ENNLNPD+SNLGKSGGVYIPPFKLARMMKEV+DKSSIEYQRLTWDALRKSI
Sbjct: 442  QPHRQEKQSENNLNPDASNLGKSGGVYIPPFKLARMMKEVEDKSSIEYQRLTWDALRKSI 501

Query: 421  NGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKF 480
            NGLVNKVNATNIKNII ELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKF
Sbjct: 502  NGLVNKVNATNIKNIITELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKF 561

Query: 481  PEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPT 540
            PEVGDLLLRRI+LQLKRAYKRNDKPQLLAAVKF+AHLVNQ VAHEIIALELLTVLLENPT
Sbjct: 562  PEVGDLLLRRIILQLKRAYKRNDKPQLLAAVKFVAHLVNQLVAHEIIALELLTVLLENPT 621

Query: 541  DDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAK 600
            DDSVEVAVGFVTECGSIL DLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAK
Sbjct: 622  DDSVEVAVGFVTECGSILNDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAK 681

Query: 601  FEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKKNIL 660
            FEGYPAVRPELDLVEQEDQLTHE+SLQEEIDPEIALDIFKSDPNFLENEKRYEDLKKNIL
Sbjct: 682  FEGYPAVRPELDLVEQEDQLTHEVSLQEEIDPEIALDIFKSDPNFLENEKRYEDLKKNIL 741

Query: 661  GEESEDEEDQSDGGSDDEEDEDEEDESEEEDEEQMQINDETETNLVNLRRTIYLTIMSSV 720
            GEESEDEED+SD GSD  EDE+EEDESEEEDEEQM INDETETNLVNLRRTIYLTIMSSV
Sbjct: 742  GEESEDEEDRSDAGSD--EDEEEEDESEEEDEEQMLINDETETNLVNLRRTIYLTIMSSV 801

Query: 721  DFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFEK 780
            DFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKV+QENFEK
Sbjct: 802  DFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQENFEK 861

Query: 781  CFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILF 840
            CFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILF
Sbjct: 862  CFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILF 921

Query: 841  QELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYL 900
            QELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRF+INFFTSIGLGGLTENLREYL
Sbjct: 922  QELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFAINFFTSIGLGGLTENLREYL 981

Query: 901  KNMPRLIMQQQKPVSDSDEESQSSGSSDSDSDSSTSESESDSDESEGEDRRRGKKRRKTG 926
            KNMPRLIMQQQKPVS+SDEES SS SSDSDSDSS S   S+S+E E EDRRR KKRRK+G
Sbjct: 982  KNMPRLIMQQQKPVSESDEESGSSDSSDSDSDSSVSSDSSESEEEE-EDRRREKKRRKSG 1036

[Close]

BLAST of Clc02G24700 vs. NCBI nr
Match: XP_022985613.1 (pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima])

HSP 1 Score: 1307.0 bits (3381), Expect = 0.0e+00
Identity = 770/961 (80.12%), Postives = 820/961 (85.33%), Query Frame = 0


Query: 1   MDRKYSRESSDEDEVKK----------------------------------NRRISRDEN 60
           MD KYSRESSDEDE+K+                                   R   +D++
Sbjct: 1   MDSKYSRESSDEDEMKRKTNRHPHSSRKRDRQHGHHEDESDSSDASEGYRGRRHEKKDDD 60

Query: 61  RQGRDNSHQDKNLHRELERGDKKK--SHQSSDEEEQRTERNKNRHDRDRRHHGENRHSRG 120
           +  R + + D ++H   +  D+ K  S +  DE  +R +R KN   RD+RHH ENR    
Sbjct: 61  QTKRISGNNDGHIHERWQNEDENKTASQRFPDEGYKRIDREKNGQGRDKRHHDENRCIE- 120

Query: 121 QEREDRKESHQSSDEDEQRTERNKNRHDRDRRHHGENHHSRGQEREDRKESHQSSDEDEQ 180
           QER DRKESHQS +E+EQR +R+K RH+RDRRH  E H  R QER DRKES+QSSDEDE+
Sbjct: 121 QERGDRKESHQSFEEEEQRMDRDKKRHNRDRRHQSE-HRQREQERVDRKESYQSSDEDER 180

Query: 181 RTGRNKNRHDRDRRHHGENRHSRGQEREDRKEAHQSSGEDEQRTERNKNRHDRDRRHHRE 240
              + KNRHDRDRRH G+N H R   R  +KE++QS+ EDE+ T RNKNRHDRDRR+  E
Sbjct: 181 SVDKEKNRHDRDRRHRGKNPH-RELGRSGKKESYQSNDEDERITGRNKNRHDRDRRYEDE 240

Query: 241 NCHGRGQEREDCKESYQSSDEDEWKNRRHNRRQRETETENKNLDHHLHRDSKDERDKELR 300
           N H R +ER D KE YQS DEDEWKNRRH+ RQ ETE  NK  D HL  DSKDERDK+L 
Sbjct: 241 NQHSREKERGDQKELYQSYDEDEWKNRRHDHRQCETENGNKITDRHLRHDSKDERDKKLH 300

Query: 301 RKSEHRRNSTDNDRERKHSKHDYKYGNSQDQLDKEVSGRREDRRNIGEKEKVSTGTIDHL 360
           RKSE RRN  DNDRERKHSKHDYK  NSQDQ DKEVSG REDRRNIG KE V TGT++HL
Sbjct: 301 RKSEDRRNWADNDRERKHSKHDYKSSNSQDQRDKEVSGWREDRRNIGGKENVGTGTLNHL 360

Query: 361 QSRRLEKQPENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSI 420
           +S R EKQ ENNLNPD+SNLGKSGGVYIPPFKLARMMKEV+DKSSIEYQRLTWDALRKSI
Sbjct: 361 KSHRQEKQSENNLNPDASNLGKSGGVYIPPFKLARMMKEVEDKSSIEYQRLTWDALRKSI 420

Query: 421 NGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKF 480
           NGLVNKVNATNIKNII ELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKF
Sbjct: 421 NGLVNKVNATNIKNIITELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKF 480

Query: 481 PEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPT 540
           PEVGDLLLRRI+LQLKRAYKRNDKPQLLAAVKF+AHLVNQ VAHEIIALELLTVLLENPT
Sbjct: 481 PEVGDLLLRRIILQLKRAYKRNDKPQLLAAVKFVAHLVNQLVAHEIIALELLTVLLENPT 540

Query: 541 DDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAK 600
           DDSVEVAVGFVTECGSIL DLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAK
Sbjct: 541 DDSVEVAVGFVTECGSILNDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAK 600

Query: 601 FEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKKNIL 660
           FEGYPAVRPELDLVEQEDQLTHE+SLQEEIDPEIALDIFKSDPNFLENEKRYEDLKKNIL
Sbjct: 601 FEGYPAVRPELDLVEQEDQLTHEVSLQEEIDPEIALDIFKSDPNFLENEKRYEDLKKNIL 660

Query: 661 GEESEDEEDQSDGGSDDEEDEDEEDESEEEDEEQMQINDETETNLVNLRRTIYLTIMSSV 720
           GEESEDEED+SD GSD  EDE+EEDESEEEDEEQM INDETETNLVNLRRTIYLTIMSSV
Sbjct: 661 GEESEDEEDRSDAGSD--EDEEEEDESEEEDEEQMLINDETETNLVNLRRTIYLTIMSSV 720

Query: 721 DFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFEK 780
           DFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKV+QENFEK
Sbjct: 721 DFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQENFEK 780

Query: 781 CFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILF 840
           CFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILF
Sbjct: 781 CFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILF 840

Query: 841 QELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYL 900
           QELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRF+INFFTSIGLGGLTENLREYL
Sbjct: 841 QELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFAINFFTSIGLGGLTENLREYL 900

Query: 901 KNMPRLIMQQQKPVSDSDEESQSSGSSDSDSDSSTSESESDSDESEGEDRRRGKKRRKTG 926
           KNMPRLIMQQQKPVS+SDEES SS SSDSDSDSS S   S+S+E E EDRRRGKKRRK+G
Sbjct: 901 KNMPRLIMQQQKPVSESDEESGSSDSSDSDSDSSVSSDSSESEEEE-EDRRRGKKRRKSG 955

[Close]

BLAST of Clc02G24700 vs. ExPASy Swiss-Prot
Match: Q8C5N3 (Pre-mRNA-splicing factor CWC22 homolog OS=Mus musculus OX=10090 GN=Cwc22 PE=1 SV=1)

HSP 1 Score: 626.7 bits (1615), Expect = 4.2e-178
Identity = 365/703 (51.92%), Postives = 495/703 (70.41%), Query Frame = 0


Query: 229 KNRRHNRRQRETETENKNLDHHLHRDSKDERDKELRRKSEHRRNSTDNDRERKHSKHDYK 288
           K+  HNR  RET +  +       R ++ ER    R  S++ R    +D ER  S+  Y 
Sbjct: 9   KSSGHNR--RETHSSYRRSSSPEDRYTEQERSPRDRGYSDYSR----SDYER--SRRGYS 68

Query: 289 YGNSQDQLDKEVSGRREDRRNIGEKEK-----------VSTGTIDHLQSRRLEKQPENNL 348
           Y +S +   ++   RRE  R+   +++              G     Q     K+ ++ L
Sbjct: 69  YDDSMESRSRDREKRRERERDADHRKRSRKSPSPDRSPARGGGQSSPQEEPTWKKKKDEL 128

Query: 349 NPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSINGLVNKVNATNIK 408
           +P    L ++GG YIPP KL  M +++ DKSS+ YQR++W+AL+KSINGL+NKVN +NI 
Sbjct: 129 DP---LLTRTGGAYIPPAKLRMMQEQITDKSSLAYQRMSWEALKKSINGLINKVNISNIS 188

Query: 409 NIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIVL 468
            II EL  EN++RGRGL  RS +++Q ASP FT V+AALVA++N+KFP++G+L+L+R++L
Sbjct: 189 IIIQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGELILKRLIL 248

Query: 469 QLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDSVEVAVGFVTE 528
             ++ Y+RNDK   L A KF+AHL+NQ VAHE++ LE+LT+LLE PTDDSVEVA+GF+ E
Sbjct: 249 NFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAIGFLKE 308

Query: 529 CGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFEGYPAVRPELDL 588
           CG  L  +SP+G++ IFER R ILHE EIDKRVQ++IE +FA+RK  F+ +P +   LDL
Sbjct: 309 CGLKLTQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPVILEGLDL 368

Query: 589 VEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKKNILGE-ESEDEEDQSD 648
           VE++DQ TH + L+++ +PE  L++FK DPNF+ENE++Y+ +KK IL E +S+   DQ  
Sbjct: 369 VEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEILDEGDSDSNTDQGA 428

Query: 649 GGSDDEEDEDEEDESE-EEDEEQMQINDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLK 708
           G S+DEE+EDEE+E E EE  +++ I+D+TE NLV+ RRTIYL I SS+DFEE  HKLLK
Sbjct: 429 GSSEDEEEEDEEEEGEDEEGGQKVTIHDKTEINLVSFRRTIYLAIQSSLDFEECAHKLLK 488

Query: 709 IKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFEKCFVQQYSMIHR 768
           ++    Q  ELC M+L+CC+Q+RTY +++GLL  RFC + K Y E+FE  F +QY  IHR
Sbjct: 489 MEFAESQTKELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFESIFKEQYDTIHR 548

Query: 769 LETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRL 828
           LETNKLRNVAK FAHLL TD+LPW VL  I+L+EE TTSSSRIF+KI FQEL E++G+  
Sbjct: 549 LETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPK 608

Query: 829 LNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYLKNMPRLIM--- 888
           LN RL D T+Q  FE + PRDNP+NTRF+INFFTSIGLGGLT+ LRE+LKN P++I+   
Sbjct: 609 LNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNTPKVIVAQK 668

Query: 889 ---QQQKP--VSDSDEESQSSGSSDSDSDSSTSESESDSDESE 911
              +Q+KP   S S E S +S SSDS+SDSS S SES SD S+
Sbjct: 669 PEAEQKKPALTSSSSESSSASDSSDSESDSSESSSESSSDASD 700

[Close]

BLAST of Clc02G24700 vs. ExPASy Swiss-Prot
Match: Q9HCG8 (Pre-mRNA-splicing factor CWC22 homolog OS=Homo sapiens OX=9606 GN=CWC22 PE=1 SV=3)

HSP 1 Score: 621.3 bits (1601), Expect = 1.7e-176
Identity = 357/713 (50.07%), Postives = 490/713 (68.72%), Query Frame = 0


Query: 210 GQEREDCKESYQ--SSDEDEWKNRRHNRRQRETETENKNLDHHLHRDSKDERDKELRRKS 269
           G +R +   SYQ  SS ED ++ +  + R R+    +++   H  R    +   E R + 
Sbjct: 13  GHDRRENLNSYQRNSSPEDRYEEQERSPRDRDYFDYSRSDYEHSRRGRSYDSSMESRNRD 72

Query: 270 EHRRNSTDNDRERKHSKHDYKYGNSQDQLDKEVSGRREDRRNIGEKEKVSTGTIDHLQSR 329
             +R   + D +RK S+                 GRR    ++ +            Q  
Sbjct: 73  REKRRERERDTDRKRSR------------KSPSPGRRNPETSVTQSSSA--------QDE 132

Query: 330 RLEKQPENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSINGL 389
              K+ ++ L+P    L ++GG YIPP KL  M +++ DK+S+ YQR++W+AL+KSINGL
Sbjct: 133 PATKKKKDELDP---LLTRTGGAYIPPAKLRMMQEQITDKNSLAYQRMSWEALKKSINGL 192

Query: 390 VNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEV 449
           +NKVN +NI  II EL  EN++RGRGL  RS +++Q ASP FT V+AALVA++N+KFP++
Sbjct: 193 INKVNISNISIIIQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQI 252

Query: 450 GDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDS 509
           G+L+L+R++L  ++ Y+RNDK   L A KF+AHL+NQ VAHE++ LE+LT+LLE PTDDS
Sbjct: 253 GELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDS 312

Query: 510 VEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFEG 569
           VEVA+GF+ ECG  L  +SP+G++ IFER R ILHE EIDKRVQ++IE +FA+RK  F+ 
Sbjct: 313 VEVAIGFLKECGLKLTQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKD 372

Query: 570 YPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKKNILGEE 629
           +P +   LDLVE++DQ TH + L+++ +PE  L++FK DPNF+ENE++Y+ +KK IL E 
Sbjct: 373 HPIILEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEILDEG 432

Query: 630 SEDEEDQSDGGSDDEEDEDEEDESEEEDE-EQMQINDETETNLVNLRRTIYLTIMSSVDF 689
             D     D GS +E++E+EE+E EE++E +++ I+D+TE NLV+ RRTIYL I SS+DF
Sbjct: 433 DTDSNTDQDAGSSEEDEEEEEEEGEEDEEGQKVTIHDKTEINLVSFRRTIYLAIQSSLDF 492

Query: 690 EEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFEKCF 749
           EE  HKLLK++    Q  ELC M+L+CC+Q+RTY +++GLL  RFC + K Y E+FE  F
Sbjct: 493 EECAHKLLKMEFPESQTKELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFEGIF 552

Query: 750 VQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQE 809
            +QY  IHRLETNKLRNVAK FAHLL TD+LPW VL  I+L+EE TTSSSRIF+KI FQE
Sbjct: 553 KEQYDTIHRLETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQE 612

Query: 810 LSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYLKN 869
           L E++G+  LN RL D T+Q  FE + PRDNP+NTRF+INFFTSIGLGGLT+ LRE+LKN
Sbjct: 613 LCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKN 672

Query: 870 MPRLIMQQQKPV---------SDSDEESQSSGSSDSDSDSSTSESESDSDESE 911
            P++I+ Q+  V         S S   S  S SSDSDSDSS S SES S+ES+
Sbjct: 673 TPKVIVAQKPDVEQNKSSPSSSSSASSSSESDSSDSDSDSSDSSSESSSEESD 702

[Close]

BLAST of Clc02G24700 vs. ExPASy Swiss-Prot
Match: Q5RA93 (Pre-mRNA-splicing factor CWC22 homolog OS=Pongo abelii OX=9601 GN=CWC22 PE=2 SV=1)

HSP 1 Score: 618.2 bits (1593), Expect = 1.5e-175
Identity = 356/713 (49.93%), Postives = 489/713 (68.58%), Query Frame = 0


Query: 210 GQEREDCKESYQ--SSDEDEWKNRRHNRRQRETETENKNLDHHLHRDSKDERDKELRRKS 269
           G +R +   SYQ  SS ED ++ +  + R R+    +++   H  R    +   E R + 
Sbjct: 13  GHDRRENLNSYQRNSSPEDRYEEQERSPRDRDYFDYSRSDYEHSRRGHSYDSSMESRNRD 72

Query: 270 EHRRNSTDNDRERKHSKHDYKYGNSQDQLDKEVSGRREDRRNIGEKEKVSTGTIDHLQSR 329
             +R   + D +RK S+                 GRR    ++ +            Q  
Sbjct: 73  REKRRERERDTDRKRSR------------KSPSPGRRNPETSVTQSSPA--------QDE 132

Query: 330 RLEKQPENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSINGL 389
              K+ ++ L+P    L ++GG YIPP KL  M +++ DK+S+ YQR++W+AL+KSINGL
Sbjct: 133 PATKKKKDELDP---LLTRTGGAYIPPAKLRMMQEQITDKNSLAYQRMSWEALKKSINGL 192

Query: 390 VNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEV 449
           +NKVN +NI  II EL  EN++RGRGL  RS +++Q ASP FT V+AALVA++N+KFP++
Sbjct: 193 INKVNISNISIIIQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQI 252

Query: 450 GDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDS 509
           G+L+L+R++L  ++ Y+RNDK   L A KF+AHL+NQ VAHE++ LE+LT+LLE PTDDS
Sbjct: 253 GELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDS 312

Query: 510 VEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFEG 569
           VEVA+GF+ ECG  L  +SP+G++ IF R R ILHE EIDKRVQ++IE +FA+RK  F+ 
Sbjct: 313 VEVAIGFLKECGLKLTQVSPRGINAIFGRLRNILHESEIDKRVQYMIEVMFAVRKDGFKD 372

Query: 570 YPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKKNILGEE 629
           +P +   LDLVE++DQ TH + L+++ +PE  L++FK DPNF+ENE++Y+ +KK IL E 
Sbjct: 373 HPIILEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEILDEG 432

Query: 630 SEDEEDQSDGGSDDEEDEDEEDESEEEDE-EQMQINDETETNLVNLRRTIYLTIMSSVDF 689
             D     D GS +E++E+EE+E EE++E +++ I+D+TE NLV+ RRTIYL I SS+DF
Sbjct: 433 DTDSNTDQDAGSSEEDEEEEEEEGEEDEEGQKVTIHDKTEINLVSFRRTIYLAIQSSLDF 492

Query: 690 EEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFEKCF 749
           EE  HKLLK++    Q  ELC M+L+CC+Q+RTY +++GLL  RFC + K Y E+FE  F
Sbjct: 493 EECAHKLLKMEFPESQTKELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFEGIF 552

Query: 750 VQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQE 809
            +QY  IHRLETNKLRNVAK FAHLL TD+LPW VL  I+L+EE TTSSSRIF+KI FQE
Sbjct: 553 KEQYDTIHRLETNKLRNVAKMFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQE 612

Query: 810 LSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYLKN 869
           L E++G+  LN RL D T+Q  FE + PRDNP+NTRF+INFFTSIGLGGLT+ LRE+LKN
Sbjct: 613 LCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKN 672

Query: 870 MPRLIMQQQKPV---------SDSDEESQSSGSSDSDSDSSTSESESDSDESE 911
            P++I+ Q+  V         S S   S  S SSDSDSDSS S SES S+ES+
Sbjct: 673 TPKVIVAQKPDVEQNKSSPSSSSSASSSSESDSSDSDSDSSDSSSESSSEESD 702

[Close]

BLAST of Clc02G24700 vs. ExPASy Swiss-Prot
Match: Q5ZKA3 (Pre-mRNA-splicing factor CWC22 homolog OS=Gallus gallus OX=9031 GN=CWC22 PE=2 SV=2)

HSP 1 Score: 606.3 bits (1562), Expect = 5.8e-172
Identity = 366/740 (49.46%), Postives = 503/740 (67.97%), Query Frame = 0


Query: 207 HGRGQERED----CKESYQSSDEDEWKNRRHNRRQRETETENKNLDHHLHRDSKDERDKE 266
           HG   ER++       S    D D  ++R  + R+R    +++    +  R+  D+R  E
Sbjct: 10  HGSNHERKERYSPRHRSLTPEDRDVERDRSRSPRRRRYSDDSRYDQEYSRREYYDDRSSE 69

Query: 267 LRRKSEHRRNSTDNDRERKHSKHDYKYGNSQDQLDKEVSGRREDRRNIGEKEKVSTGTID 326
            RR    R    +   ER + +   +  +S D    E S                 G+  
Sbjct: 70  GRRMERGRDRYYEKWEERDYDRRRKRRLSSPDHRSPERS--------------TVQGSNT 129

Query: 327 HLQSRRLEKQPENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRK 386
           H ++   +K+ E  ++P    L ++GG YIPP KL  M +++ DK+S+ YQR++W+AL+K
Sbjct: 130 HEEATSKKKKEE--VDP---ILTRTGGAYIPPAKLRMMQEQITDKNSLAYQRMSWEALKK 189

Query: 387 SINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNT 446
           SINGLVNKVN +NI+NII EL  EN++RGRGL  RS +++Q ASP FT V+AALVA++N+
Sbjct: 190 SINGLVNKVNVSNIENIIHELLQENIVRGRGLLSRSILQAQGASPIFTHVYAALVAIINS 249

Query: 447 KFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLEN 506
           KFP +G+L+L+R++L  ++ Y+RNDK   L + KF+AHL+NQ VAHE++ LE+LT+LLE 
Sbjct: 250 KFPNIGELILKRLILNFRKGYRRNDKQLCLTSSKFVAHLMNQNVAHEVLCLEMLTLLLER 309

Query: 507 PTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRK 566
           PTDDS+EVA+GF+ E G  L ++SP+G++ IF+R R ILHE +ID RVQ++IE +FA+RK
Sbjct: 310 PTDDSIEVAIGFLKESGLKLTEVSPRGINAIFDRLRHILHESKIDMRVQYMIEVMFAVRK 369

Query: 567 AKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKKN 626
             F+ +P +   LDLVE+EDQ TH + L++E +PE  L++FK DPNF+ENE++Y+ LKK 
Sbjct: 370 DGFKDHPIIPEGLDLVEEEDQFTHMLPLEDEYNPEDVLNVFKMDPNFMENEEKYKALKKE 429

Query: 627 ILGE-ESEDEEDQSDGGSDDEEDEDEEDESEEEDEEQMQINDETETNLVNLRRTIYLTIM 686
           IL E +SE E DQ  G SD+EE+EDEE   E+ED +++ ++D+TE NLV    TIYL I 
Sbjct: 430 ILDEGDSESEPDQEAGSSDEEEEEDEE---EDEDGQKVTVHDKTEINLVPSVGTIYLAIQ 489

Query: 687 SSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQEN 746
           SS+DFEE  HKLLK+     Q  ELC M+L+CC+Q+RTY +++GLL  RFC + K Y E+
Sbjct: 490 SSLDFEECAHKLLKMDFPESQTKELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMES 549

Query: 747 FEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIK 806
           FE  F +QY  IHRLETNKLRNVAK FAHLL TD++PW VL  I L+EE TTSSSRIF+K
Sbjct: 550 FEAIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSIPWSVLECIILSEETTTSSSRIFVK 609

Query: 807 ILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLR 866
           I FQELSE++G+  LN RL D T+Q  FE + PRDNP+NTRF+INFFTSIGLGGLT+ LR
Sbjct: 610 IFFQELSEYMGLPNLNARLKDITLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELR 669

Query: 867 EYLKNMPRLIMQQQKPV--SDSDEESQSSGSSDSDSDSSTSESE--------------SD 926
           E+LKN P++IM Q++ V  SDS   S++  SSDSDSDSS+S SE              SD
Sbjct: 670 EHLKNAPKMIMTQKQDVESSDSSSSSETDSSSDSDSDSSSSSSESSSSSDSSSSSSDSSD 727

[Close]

BLAST of Clc02G24700 vs. ExPASy Swiss-Prot
Match: Q08C72 (Pre-mRNA-splicing factor CWC22 homolog OS=Danio rerio OX=7955 GN=cwc22 PE=2 SV=1)

HSP 1 Score: 591.7 bits (1524), Expect = 1.5e-167
Identity = 373/785 (47.52%), Postives = 515/785 (65.61%), Query Frame = 0


Query: 133 KESHQSSDEDEQRTGRNKNRHDRDRRHHGENRH---SRGQEREDRKEAHQSSGEDEQRTE 192
           ++   S++E EQR  +       D  H   +R         R+              R +
Sbjct: 19  RDEPPSTEEIEQRQRKASTSSSEDGEHEDNDRRRVVGSPGSRDGSPRVGSPVARASPRAK 78

Query: 193 RNKNRHDRDRRHHRENCHGRGQEREDCKESYQSSDEDEWKNRRHNRRQRETETENKNLDH 252
           R++   D D      +     + R       ++SDE E KNR  +      E ++K+   
Sbjct: 79  RDQKSSDSDSDSSDSDDGVMRKIRSSVMHIRRTSDE-ETKNRERSSSPDRHEKKSKSRSR 138

Query: 253 HLHRDSKDERDKELRRKSEHRRNSTDNDRERKHSKHDYKYGNSQDQLDKEVSGRREDRRN 312
              R     R +  R +    R S + +R+R   +  Y+  +S+   +++   RR  R  
Sbjct: 139 SRSRSRSRSRSRSPRERYRRARRSRERERDRYGDRERYERRSSR---ERDWEHRRRGRSA 198

Query: 313 IGEKEKVSTGTIDHLQSRRLEKQPENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSS 372
             +K          ++ R+        L+P    L ++GG YIPP KL  M  ++ DKSS
Sbjct: 199 SPDKNDKPPTEEPPVKKRK------ETLDP---ILTRTGGAYIPPAKLRMMQAQITDKSS 258

Query: 373 IEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGF 432
           +EYQR++W+AL+KSINGL+NKVN +NI NII EL  EN++RGRGL  RS +++Q ASP F
Sbjct: 259 LEYQRMSWEALKKSINGLINKVNVSNIANIIQELLQENIVRGRGLLARSILQAQAASPIF 318

Query: 433 TDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHE 492
           T V++A+VA++N+KFP++G+L+L+R++L  ++ Y+RNDK Q L A KF+ HL+NQ VAHE
Sbjct: 319 THVYSAVVAIINSKFPQIGELILKRLILNFRKGYRRNDKQQCLTASKFVGHLINQNVAHE 378

Query: 493 IIALELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKR 552
           ++ LE+LT+LLE PTDDSVEVA+ F+ ECG  L ++SP+G++ IFER R ILHE EIDKR
Sbjct: 379 VLCLEMLTLLLERPTDDSVEVAISFLKECGLKLTEVSPRGINAIFERLRNILHESEIDKR 438

Query: 553 VQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNF 612
           VQ++IE +FAIRK  F+ +P +   LDLVE+EDQ TH + L++E + E  L++FK DPNF
Sbjct: 439 VQYMIEVMFAIRKDGFKDHPIIPEGLDLVEEEDQFTHMLPLEDEYNTEDILNVFKLDPNF 498

Query: 613 LENEKRYEDLKKNILGEESEDEEDQSDGGSDDEEDEDEEDE--SEEEDEEQMQINDETET 672
           LENE++Y+ +K+ IL E S D  D + GGS D+ED+DEEDE  +  E++E++ I D+TE 
Sbjct: 499 LENEEKYKTIKREILDEGSSDSGDDA-GGSGDDEDDDEEDEEAAAGEEQEKVTIFDQTEV 558

Query: 673 NLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLL 732
           NLV  RRTIYL I SS+DFEE  HKL+K+     Q  ELC M+L+CC+Q+RTY +++GLL
Sbjct: 559 NLVAFRRTIYLAIQSSLDFEECAHKLIKMDFPESQTKELCNMILDCCAQQRTYEKFFGLL 618

Query: 733 GQRFCKINKVYQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRL 792
             RFC + K Y E+FE  F +QY  IHRLETNKLRNVA+ FAHLL TD++PW VL  +R+
Sbjct: 619 AGRFCLLKKEYMESFEAIFQEQYETIHRLETNKLRNVARIFAHLLYTDSVPWSVLECVRM 678

Query: 793 TEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINF 852
           +E+ TTSSSRIF+KILFQEL  ++G+  LNERL D T+Q  FE +FPRDNP+NTRF+INF
Sbjct: 679 SEDTTTSSSRIFVKILFQELCAYMGLPKLNERLKDTTLQPFFEGLFPRDNPRNTRFAINF 738

Query: 853 FTSIGLGGLTENLREYLKNMPRLIMQQQKPVSDSDEESQSSGSSDSDSDSSTSESESDSD 912
           FTSIGLGGLT+ LRE+LKN P++IM Q + V  SD  S SS SSDS S SS S SESDS 
Sbjct: 739 FTSIGLGGLTDELREHLKNAPKMIMTQNQEVESSDSSSSSSSSSDS-SSSSGSSSESDSS 788

[Close]

BLAST of Clc02G24700 vs. ExPASy TrEMBL
Match: A0A6J1FSI6 (pre-mRNA-splicing factor CWC22 homolog OS=Cucurbita moschata OX=3662 GN=LOC111448393 PE=4 SV=1)

HSP 1 Score: 1316.2 bits (3405), Expect = 0.0e+00
Identity = 775/961 (80.65%), Postives = 819/961 (85.22%), Query Frame = 0


Query: 1   MDRKYSRESSDEDEVKK----------------------------------NRRISRDEN 60
           MD KYSRESSDEDE+K+                                   R   +D++
Sbjct: 1   MDSKYSRESSDEDEMKRKTNRQPHSSRKRDRQHGHHEDDSDSSDASEGYRGRRHEKKDDD 60

Query: 61  RQGRDNSHQDKNLHRELERGDKKK--SHQSSDEEEQRTERNKNRHDRDRRHHGENRHSRG 120
           +  R + + D + H   +  D+KK  S +  DE  +R +R  N   RD+RHH  NR  R 
Sbjct: 61  QAKRISGNNDGHTHERWQNEDEKKTASQRFPDEGYKRIDRENNGQGRDKRHHDGNR-CRE 120

Query: 121 QEREDRKESHQSSDEDEQRTERNKNRHDRDRRHHGENHHSRGQEREDRKESHQSSDEDEQ 180
           QER DRKESHQS + +EQR +R+K RH+RDRRH  E H  R QER DRKESHQSSDEDE+
Sbjct: 121 QERGDRKESHQSFEAEEQRMDRDKKRHNRDRRHQSE-HRQREQERVDRKESHQSSDEDER 180

Query: 181 RTGRNKNRHDRDRRHHGENRHSRGQEREDRKEAHQSSGEDEQRTERNKNRHDRDRRHHRE 240
              + KNRHDRDRRH G+N H R   R  +KE++QS+ EDEQ T RNKNRHDRDRRH  E
Sbjct: 181 SVDKEKNRHDRDRRHRGKNPH-RELGRSGKKESYQSNDEDEQITGRNKNRHDRDRRHEDE 240

Query: 241 NCHGRGQEREDCKESYQSSDEDEWKNRRHNRRQRETETENKNLDHHLHRDSKDERDKELR 300
           N H R +ER D KE Y S DEDEWKNRRH+RRQRETE  NK  D HL  DSKDERDKEL 
Sbjct: 241 NQHSREKERGDQKELYHSYDEDEWKNRRHDRRQRETENGNKITDRHLRHDSKDERDKELH 300

Query: 301 RKSEHRRNSTDNDRERKHSKHDYKYGNSQDQLDKEVSGRREDRRNIGEKEKVSTGTIDHL 360
           RKSE RRN TDNDRERKHSKHDYK  NSQDQ DKEVSG REDRRNIG KE V TGT++HL
Sbjct: 301 RKSEDRRNWTDNDRERKHSKHDYKSSNSQDQRDKEVSGWREDRRNIGGKENVGTGTLNHL 360

Query: 361 QSRRLEKQPENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSI 420
           Q  R EKQ ENNLNPD+SNLGKSGGVYIPPFKLARMMKEV+DKSSIEYQRLTWDALRKSI
Sbjct: 361 QPHRQEKQSENNLNPDASNLGKSGGVYIPPFKLARMMKEVEDKSSIEYQRLTWDALRKSI 420

Query: 421 NGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKF 480
           NGLVNKVNATNIKNII ELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKF
Sbjct: 421 NGLVNKVNATNIKNIITELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKF 480

Query: 481 PEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPT 540
           PEVGDLLLRRI+LQLKRAYKRNDKPQLLAAVKF+AHLVNQ VAHEIIALELLTVLLENPT
Sbjct: 481 PEVGDLLLRRIILQLKRAYKRNDKPQLLAAVKFVAHLVNQLVAHEIIALELLTVLLENPT 540

Query: 541 DDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAK 600
           DDSVEVAVGFVTECGSIL DLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAK
Sbjct: 541 DDSVEVAVGFVTECGSILNDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAK 600

Query: 601 FEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKKNIL 660
           FEGYPAVRPELDLVEQEDQLTHE+SLQEEIDPEIALDIFKSDPNFLENEKRYEDLKKNIL
Sbjct: 601 FEGYPAVRPELDLVEQEDQLTHEVSLQEEIDPEIALDIFKSDPNFLENEKRYEDLKKNIL 660

Query: 661 GEESEDEEDQSDGGSDDEEDEDEEDESEEEDEEQMQINDETETNLVNLRRTIYLTIMSSV 720
           GEESEDEED+SD GSD  EDE+EEDESEEEDEEQM INDETETNLVNLRRTIYLTIMSSV
Sbjct: 661 GEESEDEEDRSDAGSD--EDEEEEDESEEEDEEQMLINDETETNLVNLRRTIYLTIMSSV 720

Query: 721 DFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFEK 780
           DFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKV+QENFEK
Sbjct: 721 DFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQENFEK 780

Query: 781 CFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILF 840
           CFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILF
Sbjct: 781 CFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILF 840

Query: 841 QELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYL 900
           QELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRF+INFFTSIGLGGLTENLREYL
Sbjct: 841 QELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFAINFFTSIGLGGLTENLREYL 900

Query: 901 KNMPRLIMQQQKPVSDSDEESQSSGSSDSDSDSSTSESESDSDESEGEDRRRGKKRRKTG 926
           KNMPRLIMQQQKPVS+SDEES SS SSDSDSDSS S   S+S+E E EDRRRGKKRRK+G
Sbjct: 901 KNMPRLIMQQQKPVSESDEESGSSDSSDSDSDSSVSSDSSESEEEE-EDRRRGKKRRKSG 955

[Close]

BLAST of Clc02G24700 vs. ExPASy TrEMBL
Match: A0A6J1JE49 (pre-mRNA-splicing factor CWC22 homolog OS=Cucurbita maxima OX=3661 GN=LOC111483625 PE=4 SV=1)

HSP 1 Score: 1307.0 bits (3381), Expect = 0.0e+00
Identity = 770/961 (80.12%), Postives = 820/961 (85.33%), Query Frame = 0


Query: 1   MDRKYSRESSDEDEVKK----------------------------------NRRISRDEN 60
           MD KYSRESSDEDE+K+                                   R   +D++
Sbjct: 1   MDSKYSRESSDEDEMKRKTNRHPHSSRKRDRQHGHHEDESDSSDASEGYRGRRHEKKDDD 60

Query: 61  RQGRDNSHQDKNLHRELERGDKKK--SHQSSDEEEQRTERNKNRHDRDRRHHGENRHSRG 120
           +  R + + D ++H   +  D+ K  S +  DE  +R +R KN   RD+RHH ENR    
Sbjct: 61  QTKRISGNNDGHIHERWQNEDENKTASQRFPDEGYKRIDREKNGQGRDKRHHDENRCIE- 120

Query: 121 QEREDRKESHQSSDEDEQRTERNKNRHDRDRRHHGENHHSRGQEREDRKESHQSSDEDEQ 180
           QER DRKESHQS +E+EQR +R+K RH+RDRRH  E H  R QER DRKES+QSSDEDE+
Sbjct: 121 QERGDRKESHQSFEEEEQRMDRDKKRHNRDRRHQSE-HRQREQERVDRKESYQSSDEDER 180

Query: 181 RTGRNKNRHDRDRRHHGENRHSRGQEREDRKEAHQSSGEDEQRTERNKNRHDRDRRHHRE 240
              + KNRHDRDRRH G+N H R   R  +KE++QS+ EDE+ T RNKNRHDRDRR+  E
Sbjct: 181 SVDKEKNRHDRDRRHRGKNPH-RELGRSGKKESYQSNDEDERITGRNKNRHDRDRRYEDE 240

Query: 241 NCHGRGQEREDCKESYQSSDEDEWKNRRHNRRQRETETENKNLDHHLHRDSKDERDKELR 300
           N H R +ER D KE YQS DEDEWKNRRH+ RQ ETE  NK  D HL  DSKDERDK+L 
Sbjct: 241 NQHSREKERGDQKELYQSYDEDEWKNRRHDHRQCETENGNKITDRHLRHDSKDERDKKLH 300

Query: 301 RKSEHRRNSTDNDRERKHSKHDYKYGNSQDQLDKEVSGRREDRRNIGEKEKVSTGTIDHL 360
           RKSE RRN  DNDRERKHSKHDYK  NSQDQ DKEVSG REDRRNIG KE V TGT++HL
Sbjct: 301 RKSEDRRNWADNDRERKHSKHDYKSSNSQDQRDKEVSGWREDRRNIGGKENVGTGTLNHL 360

Query: 361 QSRRLEKQPENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSI 420
           +S R EKQ ENNLNPD+SNLGKSGGVYIPPFKLARMMKEV+DKSSIEYQRLTWDALRKSI
Sbjct: 361 KSHRQEKQSENNLNPDASNLGKSGGVYIPPFKLARMMKEVEDKSSIEYQRLTWDALRKSI 420

Query: 421 NGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKF 480
           NGLVNKVNATNIKNII ELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKF
Sbjct: 421 NGLVNKVNATNIKNIITELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKF 480

Query: 481 PEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPT 540
           PEVGDLLLRRI+LQLKRAYKRNDKPQLLAAVKF+AHLVNQ VAHEIIALELLTVLLENPT
Sbjct: 481 PEVGDLLLRRIILQLKRAYKRNDKPQLLAAVKFVAHLVNQLVAHEIIALELLTVLLENPT 540

Query: 541 DDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAK 600
           DDSVEVAVGFVTECGSIL DLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAK
Sbjct: 541 DDSVEVAVGFVTECGSILNDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAK 600

Query: 601 FEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRYEDLKKNIL 660
           FEGYPAVRPELDLVEQEDQLTHE+SLQEEIDPEIALDIFKSDPNFLENEKRYEDLKKNIL
Sbjct: 601 FEGYPAVRPELDLVEQEDQLTHEVSLQEEIDPEIALDIFKSDPNFLENEKRYEDLKKNIL 660

Query: 661 GEESEDEEDQSDGGSDDEEDEDEEDESEEEDEEQMQINDETETNLVNLRRTIYLTIMSSV 720
           GEESEDEED+SD GSD  EDE+EEDESEEEDEEQM INDETETNLVNLRRTIYLTIMSSV
Sbjct: 661 GEESEDEEDRSDAGSD--EDEEEEDESEEEDEEQMLINDETETNLVNLRRTIYLTIMSSV 720

Query: 721 DFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFEK 780
           DFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKV+QENFEK
Sbjct: 721 DFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVHQENFEK 780

Query: 781 CFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILF 840
           CFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILF
Sbjct: 781 CFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILF 840

Query: 841 QELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYL 900
           QELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRF+INFFTSIGLGGLTENLREYL
Sbjct: 841 QELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFAINFFTSIGLGGLTENLREYL 900

Query: 901 KNMPRLIMQQQKPVSDSDEESQSSGSSDSDSDSSTSESESDSDESEGEDRRRGKKRRKTG 926
           KNMPRLIMQQQKPVS+SDEES SS SSDSDSDSS S   S+S+E E EDRRRGKKRRK+G
Sbjct: 901 KNMPRLIMQQQKPVSESDEESGSSDSSDSDSDSSVSSDSSESEEEE-EDRRRGKKRRKSG 955

[Close]

BLAST of Clc02G24700 vs. ExPASy TrEMBL
Match: A0A1S3BND2 (pre-mRNA-splicing factor CWC22 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491527 PE=4 SV=1)

HSP 1 Score: 1301.2 bits (3366), Expect = 0.0e+00
Identity = 742/849 (87.40%), Postives = 773/849 (91.05%), Query Frame = 0


Query: 89  DRKESHQSSDEDE----QRTERNKNRHDRDRRHHGENHHSRGQEREDRKESHQSSDEDEQ 148
           DRK S +SSDEDE    +R  R+ +R DRDRRH  +N H R  ER D+K+S++S DE EQ
Sbjct: 2   DRKYSRESSDEDEAKGNRRASRDNDRQDRDRRHQDKNLH-REVERGDKKKSYESFDEGEQ 61

Query: 149 RTGRNKNRHDRDRRHHGENRHSRGQEREDRKEAHQSSGEDEQRTERNKNRH--------D 208
           RT RNK+RHDRDRRHH E RHSRG ERE+RKE++QSS EDE++  R+  R         +
Sbjct: 62  RTERNKSRHDRDRRHHDEKRHSRGHERENRKESYQSSDEDERKNRRHDRRQRETENENKN 121

Query: 209 RDRRHHRENCHGRGQEREDCKESYQSSDEDEWKNRRHNRRQRETETENKNLDHHLHRDSK 268
            DRR   ++   R +E  + KESYQSSDEDE KNRRH+RRQRE E ENKN+D  L  DSK
Sbjct: 122 MDRRLDNDSKDERDKELLNRKESYQSSDEDERKNRRHDRRQREIENENKNMDRRLDHDSK 181

Query: 269 DERDKELRRKSEHRRNSTDNDRERKHSKHDYKYGNSQDQLDKEVSGRREDRRNIGEKEKV 328
           DERDKEL RKS+HRRN  DNDRER+HSKHDYK+ NSQDQ DKE SGRREDRRNIGEKEKV
Sbjct: 182 DERDKELLRKSDHRRNRADNDRERRHSKHDYKHNNSQDQRDKETSGRREDRRNIGEKEKV 241

Query: 329 STGTIDHLQSRRLEKQPENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLT 388
            TGTIDH Q  R EKQ ENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLT
Sbjct: 242 GTGTIDHRQPHRQEKQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLT 301

Query: 389 WDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAAL 448
           WDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAAL
Sbjct: 302 WDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAAL 361

Query: 449 VAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELL 508
           VAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELL
Sbjct: 362 VAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELL 421

Query: 509 TVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEG 568
           TVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEG
Sbjct: 422 TVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEG 481

Query: 569 LFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDPNFLENEKRY 628
           LFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEI LDIFKSDPNFLENEKRY
Sbjct: 482 LFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSDPNFLENEKRY 541

Query: 629 EDLKKNILGEESEDEEDQSDGGSDDEEDEDEEDESEEEDEEQMQINDETETNLVNLRRTI 688
           EDLKKNILGEESEDEED+SD GSDDEEDEDEEDESEEEDEEQMQINDETETNLVNLRRTI
Sbjct: 542 EDLKKNILGEESEDEEDRSDAGSDDEEDEDEEDESEEEDEEQMQINDETETNLVNLRRTI 601

Query: 689 YLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINK 748
           YLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINK
Sbjct: 602 YLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINK 661

Query: 749 VYQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSS 808
           VYQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSS
Sbjct: 662 VYQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSS 721

Query: 809 RIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGL 868
           RIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGL
Sbjct: 722 RIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGL 781

Query: 869 TENLREYLKNMPRLIMQQQKPVSDSDEESQSSGSSDSDSDSSTSESESDSDESEGEDRRR 926
           TENLREYLKNMPRLIMQQQKPVSDSDEESQSS S  SDSDSS+SESESDS++ E +DRRR
Sbjct: 782 TENLREYLKNMPRLIMQQQKPVSDSDEESQSSDS--SDSDSSSSESESDSEDRESKDRRR 841

[Close]

BLAST of Clc02G24700 vs. ExPASy TrEMBL
Match: A0A1S3BNN3 (pre-mRNA-splicing factor CWC22 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491527 PE=4 SV=1)

HSP 1 Score: 1295.8 bits (3352), Expect = 0.0e+00
Identity = 723/799 (90.49%), Postives = 745/799 (93.24%), Query Frame = 0


Query: 131 DRKESHQSSDEDE----QRTGRNKNRHDRDRRHHGENRHSRGQEREDRKEAHQSSGEDEQ 190
           DRK S +SSDEDE    +R  R+ +R DRDRRH  +N H R  ER D+K++++S  E EQ
Sbjct: 2   DRKYSRESSDEDEAKGNRRASRDNDRQDRDRRHQDKNLH-REVERGDKKKSYESFDEGEQ 61

Query: 191 RTERNKNRHDRDRRHHRENCHGRGQEREDCKESYQSSDEDEWKNRRHNRRQRETETENKN 250
           RTERNK+RHDRDRRHH E  H RG ERE+ KESYQSSDEDE KNRRH+RRQRE E ENKN
Sbjct: 62  RTERNKSRHDRDRRHHDEKRHSRGHERENRKESYQSSDEDERKNRRHDRRQREIENENKN 121

Query: 251 LDHHLHRDSKDERDKELRRKSEHRRNSTDNDRERKHSKHDYKYGNSQDQLDKEVSGRRED 310
           +D  L  DSKDERDKEL RKS+HRRN  DNDRER+HSKHDYK+ NSQDQ DKE SGRRED
Sbjct: 122 MDRRLDHDSKDERDKELLRKSDHRRNRADNDRERRHSKHDYKHNNSQDQRDKETSGRRED 181

Query: 311 RRNIGEKEKVSTGTIDHLQSRRLEKQPENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQD 370
           RRNIGEKEKV TGTIDH Q  R EKQ ENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQD
Sbjct: 182 RRNIGEKEKVGTGTIDHRQPHRQEKQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQD 241

Query: 371 KSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMAS 430
           KSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMAS
Sbjct: 242 KSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMAS 301

Query: 431 PGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQV 490
           PGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQV
Sbjct: 302 PGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQV 361

Query: 491 AHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEI 550
           AHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEI
Sbjct: 362 AHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEI 421

Query: 551 DKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSD 610
           DKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEI LDIFKSD
Sbjct: 422 DKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSD 481

Query: 611 PNFLENEKRYEDLKKNILGEESEDEEDQSDGGSDDEEDEDEEDESEEEDEEQMQINDETE 670
           PNFLENEKRYEDLKKNILGEESEDEED+SD GSDDEEDEDEEDESEEEDEEQMQINDETE
Sbjct: 482 PNFLENEKRYEDLKKNILGEESEDEEDRSDAGSDDEEDEDEEDESEEEDEEQMQINDETE 541

Query: 671 TNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGL 730
           TNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGL
Sbjct: 542 TNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGL 601

Query: 731 LGQRFCKINKVYQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIR 790
           LGQRFCKINKVYQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIR
Sbjct: 602 LGQRFCKINKVYQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIR 661

Query: 791 LTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSIN 850
           LTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSIN
Sbjct: 662 LTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSIN 721

Query: 851 FFTSIGLGGLTENLREYLKNMPRLIMQQQKPVSDSDEESQSSGSSDSDSDSSTSESESDS 910
           FFTSIGLGGLTENLREYLKNMPRLIMQQQKPVSDSDEESQSS S  SDSDSS+SESESDS
Sbjct: 722 FFTSIGLGGLTENLREYLKNMPRLIMQQQKPVSDSDEESQSSDS--SDSDSSSSESESDS 781

Query: 911 DESEGEDRRRGKKRRKTGR 926
           ++ E +DRRR KKRRKT R
Sbjct: 782 EDRESKDRRREKKRRKTRR 797

[Close]

BLAST of Clc02G24700 vs. ExPASy TrEMBL
Match: A0A0A0L1Y4 (MI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G290770 PE=4 SV=1)

HSP 1 Score: 1295.4 bits (3351), Expect = 0.0e+00
Identity = 723/799 (90.49%), Postives = 748/799 (93.62%), Query Frame = 0


Query: 131 DRKESHQSSDEDE----QRTGRNKNRHDRDRRHHGENRHSRGQEREDRKEAHQSSGEDEQ 190
           DRK S +SSDEDE    +RT R+ +R DRD+RH  +N H R  ER D+K++++S  E EQ
Sbjct: 2   DRKYSRESSDEDEVKGNRRTSRDNDRQDRDKRHQDKNLH-REVERGDKKKSYESFDEGEQ 61

Query: 191 RTERNKNRHDRDRRHHRENCHGRGQEREDCKESYQSSDEDEWKNRRHNRRQRETETENKN 250
           RTERNK+RHDRDRRHH E  H RGQERE+ KESYQSSDEDE KNRRH+RRQRETE ENKN
Sbjct: 62  RTERNKSRHDRDRRHHDEKRHSRGQERENRKESYQSSDEDERKNRRHDRRQRETENENKN 121

Query: 251 LDHHLHRDSKDERDKELRRKSEHRRNSTDNDRERKHSKHDYKYGNSQDQLDKEVSGRRED 310
            D  L  DSKDERDKEL RKS+HRRN TD+DRER+HSKHDYK+ N QDQ DKE SGRRED
Sbjct: 122 YDRRLDHDSKDERDKELLRKSDHRRNRTDSDRERRHSKHDYKHNNFQDQRDKEASGRRED 181

Query: 311 RRNIGEKEKVSTGTIDHLQSRRLEKQPENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQD 370
           RRNIGEKEKV TGTIDHLQ  R EKQ ENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQD
Sbjct: 182 RRNIGEKEKVGTGTIDHLQPHRQEKQTENNLNPDSSNLGKSGGVYIPPFKLARMMKEVQD 241

Query: 371 KSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMAS 430
           KSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMAS
Sbjct: 242 KSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMAS 301

Query: 431 PGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQV 490
           PGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQV
Sbjct: 302 PGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQV 361

Query: 491 AHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEI 550
           AHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEI
Sbjct: 362 AHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPKGLHGIFERFRGILHEGEI 421

Query: 551 DKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSD 610
           DKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEI LDIFKSD
Sbjct: 422 DKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEISLQEEIDPEITLDIFKSD 481

Query: 611 PNFLENEKRYEDLKKNILGEESEDEEDQSDGGSDDEEDEDEEDESEEEDEEQMQINDETE 670
           PNFLENEKRYEDLKKNILGEESEDEED+SD GSD+ EDEDEEDESEEEDEEQMQINDETE
Sbjct: 482 PNFLENEKRYEDLKKNILGEESEDEEDRSDAGSDESEDEDEEDESEEEDEEQMQINDETE 541

Query: 671 TNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGL 730
           TNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGL
Sbjct: 542 TNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGL 601

Query: 731 LGQRFCKINKVYQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIR 790
           LGQRFCKINKVYQENF+KCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIR
Sbjct: 602 LGQRFCKINKVYQENFDKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIR 661

Query: 791 LTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSIN 850
           LTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSIN
Sbjct: 662 LTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSIN 721

Query: 851 FFTSIGLGGLTENLREYLKNMPRLIMQQQKPVSDSDEESQSSGSSDSDSDSSTSESESDS 910
           FFTSIGLGGLTENLREYLKNMPRLIMQQQKPVSDSDEESQSS S  SDSDSS+SES+SDS
Sbjct: 722 FFTSIGLGGLTENLREYLKNMPRLIMQQQKPVSDSDEESQSSDS--SDSDSSSSESKSDS 781

Query: 911 DESEGEDRRRGKKRRKTGR 926
           ++SE EDRRR KKRRKT R
Sbjct: 782 EDSEIEDRRREKKRRKTRR 797

[Close]

BLAST of Clc02G24700 vs. TAIR 10
Match: AT1G80930.1 (MIF4G domain-containing protein / MA3 domain-containing protein )

HSP 1 Score: 879.8 bits (2272), Expect = 1.9e-255
Identity = 565/935 (60.43%), Postives = 680/935 (72.73%), Query Frame = 0


Query: 7   RESSDEDEVKKNRRISRDENRQG--RDNSHQDKNLHRELERGDKKKSHQSSDEEEQRTER 66
           R  ++ D+V +  R+S DE+R+   RD          E  RGDK +  ++SD+EE     
Sbjct: 30  RSRTETDDVARRVRVSDDEDRKSSRRDLEIGGTVADGEGRRGDKVRRKETSDDEELAR-- 89

Query: 67  NKNRHDRDRRHHGENRHSRGQEREDRKESHQSSDEDEQRTERNKNRHDRDRRHHGENHHS 126
                               + R+DRKE++  S++D  +      R + D    GE   +
Sbjct: 90  --------------------RSRKDRKEANSGSEDDRGK------RIEVDSDGDGERRVN 149

Query: 127 RGQEREDRKESHQSSDEDEQRTGRNKN--RHDRDRRHHGENRHSRGQEREDRKEAHQSS- 186
           +G+   DR  +  SSDE++   G  K     D D    G  R  +  E++ R+ +H+ S 
Sbjct: 150 KGR-NTDRVRADTSSDEEDDLKGNKKEPMEVDDDYGRRGRRRSPKVMEKQGRERSHRGSR 209

Query: 187 ---------GEDEQRTERNKNRHDRDRRHHRENCHGRGQEREDCKESYQSSDEDEWKNRR 246
                     +D QR+   +    R RR HR +      E    +   + +D       +
Sbjct: 210 VIADKPSDEEDDRQRSRGGRRESQRKRRDHRASDDDEEGEIRSERRGKEKNDRGSEGLLK 269

Query: 247 HNRRQRETETENKNLDHHLHRDSKDERDKELRRKSEHRRNSTDNDRERKHSKHDYKYGNS 306
            +RR+R+    ++N            R +E  RK   RR+  D  R+ K  +H+ KY +S
Sbjct: 270 RDRRERDLTDGHEN----------GSRRRESERKDRSRRD--DGVRDEKERRHNDKYDDS 329

Query: 307 Q-DQLDKEVSGRREDRRNIGEKEKVSTGTIDHLQSRRLEKQPENNLNPDSSN---LGKSG 366
           Q D+L KE S +RE+++    K K++                   LNP  +N   LGK+G
Sbjct: 330 QRDKLRKEDSRKREEKKIEVPKPKLA------------------ELNPSENNAMALGKTG 389

Query: 367 GVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENL 426
           GVYIPPFKLARMMKEV+DKSS+EYQRLTWDALRKSINGLVNKVNA+NIKNIIPELFAENL
Sbjct: 390 GVYIPPFKLARMMKEVEDKSSVEYQRLTWDALRKSINGLVNKVNASNIKNIIPELFAENL 449

Query: 427 IRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDK 486
           IRGRGLFCRSCMKSQMASPGFTDVFAALVAV+N KFPEV +LLL+R+VLQLKRAYKRNDK
Sbjct: 450 IRGRGLFCRSCMKSQMASPGFTDVFAALVAVINAKFPEVAELLLKRVVLQLKRAYKRNDK 509

Query: 487 PQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDSVEVAVGFVTECGSILKDLSPK 546
           PQLLAAVKFIAHLVNQQVA EIIALEL+T+LL +PTDDSVEVAVGFVTECG++L+D+SP+
Sbjct: 510 PQLLAAVKFIAHLVNQQVAEEIIALELVTILLGDPTDDSVEVAVGFVTECGAMLQDVSPR 569

Query: 547 GLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFEGYPAVRPELDLVEQEDQLTHEI 606
           GL+GIFERFRGILHEGEIDKRVQ+LIE LFA RKAKF+G+PAVRPELDLV  E++ +H++
Sbjct: 570 GLNGIFERFRGILHEGEIDKRVQYLIESLFATRKAKFQGHPAVRPELDLV--EEKYSHDL 629

Query: 607 SLQEEIDPEIALDIFKSDPNFLENEKRYEDLKKNILGEESEDEEDQSDGGSDDEEDEDEE 666
           SL  EIDPE ALDIFK DP+F+ENEK+YE LKK +LG+E  ++ED SD  S+D  +++EE
Sbjct: 630 SLDHEIDPETALDIFKPDPDFVENEKKYEALKKELLGDEESEDEDGSDASSED--NDEEE 689

Query: 667 DESEEEDEEQMQINDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEIELCV 726
           DES+EEDEEQM+I DETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQE+ELC+
Sbjct: 690 DESDEEDEEQMRIRDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCI 749

Query: 727 MLLECCSQERTYLRYYGLLGQRFCKINKVYQENFEKCFVQQYSMIHRLETNKLRNVAKFF 786
           MLLECCSQERTYLRYYGLLGQRFC INK++QENFEKCFVQQYSMIHRLETNKLRNVAKFF
Sbjct: 750 MLLECCSQERTYLRYYGLLGQRFCMINKIHQENFEKCFVQQYSMIHRLETNKLRNVAKFF 809

Query: 787 AHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPTMQDS 846
           AHLLGTDALPWHVL+YIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERL DPTMQ+S
Sbjct: 810 AHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLQDPTMQES 869

Query: 847 FESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYLKNMPRLIMQQQKPVSDSDEESQSS 906
            ESIFP+DNPKNTRF+INFFTSIGLGG+TENLREYLKNMP LIMQ+QK V++S E   SS
Sbjct: 870 LESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPSLIMQRQKQVAES-ESGSSS 900

Query: 907 GSSDSDSDSSTSESESDSDESEGEDRRRGKKRRKT 924
           GS  SDS+S +    S S  S+  DR + K+RR++
Sbjct: 930 GSDSSDSESESESGSSSSSSSDESDREKRKRRRRS 900

[Close]

BLAST of Clc02G24700 vs. TAIR 10
Match: AT1G52325.1 (Initiation factor eIF-4 gamma, MA3 )

HSP 1 Score: 141.0 bits (354), Expect = 4.9e-33
Identity = 81/184 (44.02%), Postives = 103/184 (55.98%), Query Frame = 0


Query: 681 MSSVDFEEAGHKLLKIKLEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQE 740
           MSS+DFEEAGHKLLKI+LE GQ +ELCVM+LECC++E+TY  +Y                
Sbjct: 1   MSSLDFEEAGHKLLKIRLEQGQGMELCVMVLECCTEEKTYRSFY---------------- 60

Query: 741 NFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFI 800
                                                            ED+TSSS IF+
Sbjct: 61  ------------------------------------------------VEDSTSSSLIFL 120

Query: 801 KILFQELSEHLGIRLLNERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENL 860
           K LF +LSE L I+LLNE+L DPTM+++FESIFP+D+ KNT FSI FFT IGLGG+T+ L
Sbjct: 121 KTLFLQLSELLRIKLLNEKLQDPTMEETFESIFPKDHRKNTLFSIIFFTKIGLGGITQTL 120

Query: 861 REYL 865
           R+ +
Sbjct: 181 RQLI 120

The following BLAST results are available for this feature:

BLAST of Clc02G24700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900963.1	0.0e+00	91.74	pre-mRNA-splicing factor CWC22 homolog [Benincasa hispida] >XP_038900964.1 pre-m...	[more]
XP_022943731.1	0.0e+00	80.65	pre-mRNA-splicing factor CWC22 homolog [Cucurbita moschata]	[more]
KAG7010258.1	0.0e+00	80.23	Pre-mRNA-splicing factor CWC22-like protein, partial [Cucurbita argyrosperma sub...	[more]
KAG6570382.1	0.0e+00	80.23	Pre-mRNA-splicing factor CWC22-like protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022985613.1	0.0e+00	80.12	pre-mRNA-splicing factor CWC22 homolog [Cucurbita maxima]	[more]

BLAST of Clc02G24700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8C5N3	4.2e-178	51.92	Pre-mRNA-splicing factor CWC22 homolog OS=Mus musculus OX=10090 GN=Cwc22 PE=1 SV...	[more]
Q9HCG8	1.7e-176	50.07	Pre-mRNA-splicing factor CWC22 homolog OS=Homo sapiens OX=9606 GN=CWC22 PE=1 SV=...	[more]
Q5RA93	1.5e-175	49.93	Pre-mRNA-splicing factor CWC22 homolog OS=Pongo abelii OX=9601 GN=CWC22 PE=2 SV=...	[more]
Q5ZKA3	5.8e-172	49.46	Pre-mRNA-splicing factor CWC22 homolog OS=Gallus gallus OX=9031 GN=CWC22 PE=2 SV...	[more]
Q08C72	1.5e-167	47.52	Pre-mRNA-splicing factor CWC22 homolog OS=Danio rerio OX=7955 GN=cwc22 PE=2 SV=1	[more]

BLAST of Clc02G24700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FSI6	0.0e+00	80.65	pre-mRNA-splicing factor CWC22 homolog OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1JE49	0.0e+00	80.12	pre-mRNA-splicing factor CWC22 homolog OS=Cucurbita maxima OX=3661 GN=LOC1114836...	[more]
A0A1S3BND2	0.0e+00	87.40	pre-mRNA-splicing factor CWC22 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A1S3BNN3	0.0e+00	90.49	pre-mRNA-splicing factor CWC22 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A0A0L1Y4	0.0e+00	90.49	MI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G290770 PE=4 SV=...	[more]

BLAST of Clc02G24700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80930.1	1.9e-255	60.43	MIF4G domain-containing protein / MA3 domain-containing protein	[more]
AT1G52325.1	4.9e-33	44.02	Initiation factor eIF-4 gamma, MA3	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003891	Initiation factor eIF-4 gamma, MA3	SMART	SM00544	ma3_7	coord: 672..778 e-value: 2.8E-38 score: 143.2
IPR003891	Initiation factor eIF-4 gamma, MA3	PFAM	PF02847	MA3	coord: 672..778 e-value: 2.0E-30 score: 105.1
IPR003891	Initiation factor eIF-4 gamma, MA3	PROSITE	PS51366	MI	coord: 671..787 score: 24.71707
IPR003890	MIF4G-like, type 3	SMART	SM00543	if4_15	coord: 381..564 e-value: 1.1E-38 score: 144.5
IPR016021	MIF4G-like domain superfamily	GENE3D	1.25.40.180		coord: 338..624 e-value: 1.5E-99 score: 334.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 873..925
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..345
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 628..662
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 621..665
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 873..897
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..334
None	No IPR available	PANTHER	PTHR18034	CELL CYCLE CONTROL PROTEIN CWF22-RELATED	coord: 332..912
None	No IPR available	PANTHER	PTHR18034:SF3	PRE-MRNA-SPLICING FACTOR CWC22 HOMOLOG	coord: 332..912
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 371..612

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G24700.2	Clc02G24700.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0006417	regulation of translation
cellular_component	GO:0071013	catalytic step 2 spliceosome
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding