Clc02G24260 (gene) Watermelon (cordophanus) v2

Overview
NameClc02G24260
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Descriptionreactive oxygen species modulator 1
LocationClcChr02: 36132447 .. 36135979 (+)
RNA-Seq ExpressionClc02G24260
SyntenyClc02G24260
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAGAGATAGCTGTTTGGCTCGAGTTACTGCCGGAGTTGCCGTTGGTGGCGCTGTAGGCGGAGCCGTCGGTAAGGAAAACCCTAAATTTTCTTCAAAGTTCAATTCTGTTACCTGTCGTCTTCTTATATATCCTTGTTATTCCCTTTTTCCTTTTGTTTCTCGAGTTCCGAGTTCTGGTTATGGTTTGATTGTTGTTCCGCTTCTTCGGTTATTGAGTAGTTATATGTATGGGATGTGTTGGATTAAAGAGTTTGACATAAGCAGGAAGCTGGATAATTGGTCAAGTTGCGTTCTTGCATCTGTGATTGAACCATGTTTGTTTTTCCGTGAAAATGTACTACTAGAAAATTTAGCGCCATGTAACCTTGGGTACCCTATAGAATTCTTCCATTTGATCTCTCATGTTAAAGCTATGTTTCCTTCAGTTTTTATAAATCAAGGCTTTATTTGTTGGATCATATCACTTGCTTGTGGAGATTATCTTCATTGTGTAGAAAGAGTTCTTAGCTTTTCATTGCCCATGTCATTATTGTGTAGAGCATGTTTGGGTTTGGGAGTGATTTTACAATAATCACTTTTGTCATTTTCAAAATCACTATAAAACATGTTTTTTTATTGTTTTGGAGTGATTGAAAGCATGTTTTAGAGTAATTTTAAAAATGACAAAAGTAATTTTGACGGTTTTAAAATCATTCCCAAACATAGACTTAACTTGTTAAGTATGAAGTCAATTGATCTGATGTTTGGCGTCTGGTTGTACTCCATAGGCTTATTTTGTGTATACCTCTTAAAGTTGGCCGGAACTTGTGTTAAAGAATGTAGCTTAGTGATTATCATTTATGATCCATCTTCCATCCCAGAATGTACTGACTACTTGATGCTCAAAGTTTTAACCTTATTTAAATTGTAACATTATACTTTTTAAGGAAGCTCCTTATTTGCTTTCTCCATTTTTAATCTATTAGAGTGTCGAGCATTACGAACTAGCCAGTGCCACAACTTTGAAGATATACGTCAGTAATTAAGCCATTGTAATCAACAATTTTGGCTATCTCTCTTTCTTTTTGAATTTTAATATTGGACGGCCTTTTATGTTTTAGAGTTTCTTACAATTAATTTTATTCAATTTTTTTCCTGTGTACGGAGTATAACTCCGCGCACCCCCACAATAGTTTCTTTCCATGCTTTTCTTCAGTTGTGTGCTACAGTTTTAACTGATACAATATGTGCCATCCGAATTTTGAAGTATGATATGTTTTGGCTAAGGATTCTAGAACTAACACATTTTTTTCTCTAGGTGCTGTTTATGGGACCTATGAGGCAATTAGATTTAAGGTATACTATCTTCTCTGATCCAAATCTTTTAAAAAAACAAGACTTGGAATTCAACCACGGCTAATCTGTGTTTTGATGATTTGAAGTTTCTCATCAAATTATTATGAATATTTAATCTTTTTCCAATTAATTAATGTTTTATCTAAACATTTTGAAACTAATATAGCAATATGAGATTCCAGCTCTGCCTCATTAGGAATTCTATGATCATAGGAGACTACAATAGTTATATTTTATTAGCATGGGATCAAAATTCGCGTCAACCTACTTTGAAGTGAAAATGAAATACTACACATTTGGCCTTCTAAAATCAAATTTCATTATCTTCTTCCACGTATTTTATATTCTTCTTCGTGTTATTCTAAATTGTTAATTAGATGAGAGGAATCCATAGATTATAGGGAATTGTTAATTATTCCTGAAATTGCTACATTCGTTTCTACAGACAAACGTCTATTCCCTGTCTTAAGCCCTTTTGCATTATTCATTCTCACTATGTTAAGTTTTTGCCCTAAAAACCCAAAGATTTATGACAAACTTCATACAGTTCCTGGTGATGATGGATGGCAATGAATTATTTACCTAAACTTGCATTTGTTCTTGCAGGTGCCAGGACTTTTGAAAATTAGGTATATTGGACAAACAACACTTGGAAGTGCTGCCATATTTGGCCTTTTCTTAGGTGCAGGGAGTTTGATACATTGTGGAAAGTCATATTAAAGCATAAGCTCCTGTATTTGGGTCAGATAATATTGTTTGTTTTTTAGATTTCTTGCTTTTGAACATGAAGTTAGTGCAGCAGGTCATTTGTTTATTTAAAAAGCTTCCATTTGTGGTTGTTGGTTAAAAGGAACAAAGTGGTCAATTGATGGTGATATGGCTTCACCCTACTCGGATATGGATTTTCAAGTTTTCATGACATAAAATATTTATGTTGATTTCGACATTTTCGATCAAATATTTCTATCGGCGGATATTTTGTAAATAAAAAATTCTAGAAGTTATTAAATTAATAATCAAGTAGTTTATACCTCTAAATTATGTTTTGTATGTTGTTATTAGTATTCGTATACATCTAATTAATGTTTTATGTATATGTATAAAAGATTTTGAGATATATATATATATGTATATGTATGTATAAATAATGTCAAAGGCATTTGTTTCAAGTCTTTCATCTTAAACTATTCCTCCCAAAAGCACTCTTGTGCACAGTATAGATAATCTCCTGAGTTTTTATGGACTATGATAAATAGAATTTCTTTCATTTTTATTTATTTTCAAGTGAAAAATTGACCCCATTAGCTAAATCTGCCTATTTTTAAAGCCAGAAGTTTACTTGCTGACTACAAATCCTCCAATCTTGACAGCTTCATTATAGAGGTTAGCACATATTGGTAGTGATTTTATATCATTAGGTGCATGAGAGGGAAAGAAAGAAGGTCATGATTTTATCATAGATTCAAGCGTTCAGAAGTAGGCAGTTGCATCGAATCATTATCAGCACTATAAATAACGTAAGAATTTGCCCATTTCAATGTGGCGAGTGTGAAAAAGTTAAGGAAGATTAGAAAAGCTCTACTGTGTGAGTGCACTTTATTGTGTTTTGGATTAGTTGAAGTAACGCCTCATACCCAAGTTTTGGCACCTGATGGTCTCTACATTCTCCCCAGACCCAGGATTCGGCACCTTATGGTCTCGACATTCTCTCTCATTTGGATGTGATTTCGGTTCATTCATGTCTCATTCCTAAACTTGAGGCGTTACATCCCACCAGCTTAAGCTTAGTTTGTCCCCAAACCACATCTCGAGAGGTTCTGCCTTGATACCAAACACCCTAGGCCAAGATTTAAACTAGGACGAGTGCAAAGGATTTACATTAGTAAAAGATTATACATCCTTATTTTCAAATTTCAAAATCTAGGTTATATGACATTTTCGTCATGCAATTTGGGATATCGATACAAAGATCTCAAGAAAAATAAAAATAAAAAAAATAAAAGTTGCTTTGCTTTTATCATCATTCATCGGCAGGAAAAAGAAGTAGAAATATTGAAGGGAAAAAAACAAAGAAAAGACGACTCCACTGGGGATCGAACCCAGAATCTCTGGTTCCGTAGACCAGCGCCTTATCCATTGGGCCATGGAGTCGCTGTTGAAATACTTACCGCTTATAAGTTACAATGCACATGA

mRNA sequence

ATGGCGAGAGATAGCTGTTTGGCTCGAGTTACTGCCGGAGTTGCCGTTGGTGGCGCTGTAGGCGGAGCCGTCGGTAAGGAAAACCCTAAATTTTCTTCAAAGTTCAATTCTGTTACCTGTCGTCTTCTTATATATCCTTGTTATTCCCTTTTTCCTTTTGTTTCTCGAGTTCCGAGTTCTGGTTATGGTTTGATTGTTGTTCCGCTTCTTCGGTTATTGAGTAGTTATATGTATGGGATGTGTTGGATTAAAGAGTTTGACATAAGCAGGAAGCTGGATAATTGGTCAAGTTGCGTTCTTGCATCTGTGATTGAACCATGTGCTGTTTATGGGACCTATGAGGCAATTAGATTTAAGGTGCCAGGACTTTTGAAAATTAGGTATATTGGACAAACAACACTTGGAAGTGCTGCCATATTTGGCCTTTTCTTAGATTTCTTGCTTTTGAACATGAAGTTAGTGCAGCAGACCCAGGATTCGGCACCTTATGGTCTCGACATTCTCTCTCATTTGGATGTGATTTCGGTTCATTCATGTCTCATTCCTAAACTTGAGGCGTTACATCCCACCAGCTTAAGCTTAGTTTGTCCCCAAACCACATCTCGAGAGGAAAAAGAAGTAGAAATATTGAAGGGAAAAAAACAAAGAAAAGACGACTCCACTGGGGATCGAACCCAGAATCTCTGGTTCCGTAGACCAGCGCCTTATCCATTGGGCCATGGAGTCGCTGTTGAAATACTTACCGCTTATAAGTTACAATGCACATGA

Coding sequence (CDS)

ATGGCGAGAGATAGCTGTTTGGCTCGAGTTACTGCCGGAGTTGCCGTTGGTGGCGCTGTAGGCGGAGCCGTCGGTAAGGAAAACCCTAAATTTTCTTCAAAGTTCAATTCTGTTACCTGTCGTCTTCTTATATATCCTTGTTATTCCCTTTTTCCTTTTGTTTCTCGAGTTCCGAGTTCTGGTTATGGTTTGATTGTTGTTCCGCTTCTTCGGTTATTGAGTAGTTATATGTATGGGATGTGTTGGATTAAAGAGTTTGACATAAGCAGGAAGCTGGATAATTGGTCAAGTTGCGTTCTTGCATCTGTGATTGAACCATGTGCTGTTTATGGGACCTATGAGGCAATTAGATTTAAGGTGCCAGGACTTTTGAAAATTAGGTATATTGGACAAACAACACTTGGAAGTGCTGCCATATTTGGCCTTTTCTTAGATTTCTTGCTTTTGAACATGAAGTTAGTGCAGCAGACCCAGGATTCGGCACCTTATGGTCTCGACATTCTCTCTCATTTGGATGTGATTTCGGTTCATTCATGTCTCATTCCTAAACTTGAGGCGTTACATCCCACCAGCTTAAGCTTAGTTTGTCCCCAAACCACATCTCGAGAGGAAAAAGAAGTAGAAATATTGAAGGGAAAAAAACAAAGAAAAGACGACTCCACTGGGGATCGAACCCAGAATCTCTGGTTCCGTAGACCAGCGCCTTATCCATTGGGCCATGGAGTCGCTGTTGAAATACTTACCGCTTATAAGTTACAATGCACATGA

Protein sequence

MARDSCLARVTAGVAVGGAVGGAVGKENPKFSSKFNSVTCRLLIYPCYSLFPFVSRVPSSGYGLIVVPLLRLLSSYMYGMCWIKEFDISRKLDNWSSCVLASVIEPCAVYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGLFLDFLLLNMKLVQQTQDSAPYGLDILSHLDVISVHSCLIPKLEALHPTSLSLVCPQTTSREEKEVEILKGKKQRKDDSTGDRTQNLWFRRPAPYPLGHGVAVEILTAYKLQCT
Homology
[Close]
BLAST of Clc02G24260 vs. NCBI nr
Match: KAF2291850.1 (hypothetical protein GH714_035840 [Hevea brasiliensis])

HSP 1 Score: 106.7 bits (265), Expect = 3.0e-19
Identity = 71/149 (47.65%), Postives = 87/149 (58.39%), Query Frame = 0 

Query: 1   MARDSCLARVTAGVAVGGAVGGAVGKENPKFSSKFNSVTCRLLIYP-----CYSLFPFVS 60
           MARDSCLARVTAGVAVGGAVGGAV   +   + +  +V  RL +        +S F    
Sbjct: 1   MARDSCLARVTAGVAVGGAVGGAVVLRSALGTIRLRTVEIRLELVEEKGSLGWSDFQLFV 60

Query: 61  RVPSSGYGLIVVPLLRLLSSYMYGMCWIKEFDISRKLDNWSSCVLASVIEPCAVYGTYEA 120
           R       L++  ++  LS +   M    +F++  K                AVYGTYEA
Sbjct: 61  RNDGFCLKLVIESIVYCLSDHCVDMRPSSDFNVYNKEK-----------ARMAVYGTYEA 120

Query: 121 IRFKVPGLLKIRYIGQTTLGSAAIFGLFL 145
           IR+KVPGLLKIR+IGQTTLGSAAIFGLFL
Sbjct: 121 IRYKVPGLLKIRHIGQTTLGSAAIFGLFL 138

[Close]
BLAST of Clc02G24260 vs. NCBI nr
Match: RVX19981.1 (hypothetical protein CK203_004530 [Vitis vinifera])

HSP 1 Score: 104.0 bits (258), Expect = 2.0e-18
Identity = 75/152 (49.34%), Postives = 87/152 (57.24%), Query Frame = 0 

Query: 1   MARDSCLARVTAGVAVGGAVGGAVG-------KENPKFSSKFNSVTCRLLIYPCYSLFPF 60
           MARDSCLARVTAGVAVGGAVGGAV        +E      K  +VT      P   L   
Sbjct: 1   MARDSCLARVTAGVAVGGAVGGAVVFNAVFGLRETLGMGEKMLNVTSSNFPPPNELLEKL 60

Query: 61  VSRVPSSGYGLI-VVPLLRLLSSYMYGMCWIKEFDISRKLDNWSSCVLASVIEPCAVYGT 120
           ++     G G+I VV  +RL                       ++CV+ S+    AVYGT
Sbjct: 61  LTDDEILGSGMIHVVSTMRLSIG--------------------AACVVLSL---GAVYGT 120

Query: 121 YEAIRFKVPGLLKIRYIGQTTLGSAAIFGLFL 145
           YEAIR+KVPGLLKIRYIGQTTLGSAA+FGLFL
Sbjct: 121 YEAIRYKVPGLLKIRYIGQTTLGSAAVFGLFL 129

[Close]
BLAST of Clc02G24260 vs. NCBI nr
Match: BAT93392.1 (hypothetical protein VIGAN_07234500 [Vigna angularis var. angularis])

HSP 1 Score: 86.3 bits (212), Expect = 4.2e-13
Identity = 64/144 (44.44%), Postives = 77/144 (53.47%), Query Frame = 0 

Query: 1   MARDSCLARVTAGVAVGGAVGGAVGKENPKFSSKFNSVTCRLLIYPCYSLFPFVSRVPSS 60
           MARD+ L RV  G AVGGA+GGAVG+  P            L +   +S    VS+ P  
Sbjct: 1   MARDNVLTRVATGAAVGGAIGGAVGEITPLI----------LCLVTSFS----VSQTPH- 60

Query: 61  GYGLIVVPLLRLLSSYMYGMCWIKEFDISRKLDNWSSCVLASVIEPCAVYGTYEAIRFKV 120
               I   LLRL+ S +             KL          V+   AVYGTY+AIR+KV
Sbjct: 61  ----IFRYLLRLILSIL-------------KL---------GVLHTGAVYGTYDAIRYKV 103

Query: 121 PGLLKIRYIGQTTLGSAAIFGLFL 145
           PG LKIR+IGQTTLGSAA+F LFL
Sbjct: 121 PGFLKIRHIGQTTLGSAAVFSLFL 103

[Close]
BLAST of Clc02G24260 vs. NCBI nr
Match: XP_004140202.2 (reactive oxygen species modulator 1 [Cucumis sativus] >XP_008449669.1 PREDICTED: reactive oxygen species modulator 1 [Cucumis melo] >XP_022152962.1 reactive oxygen species modulator 1 [Momordica charantia] >XP_022943286.1 reactive oxygen species modulator 1 isoform X2 [Cucurbita moschata] >XP_022986427.1 reactive oxygen species modulator 1 isoform X2 [Cucurbita maxima] >XP_023511835.1 reactive oxygen species modulator 1 [Cucurbita pepo subsp. pepo] >XP_038900697.1 reactive oxygen species modulator 1 [Benincasa hispida] >KAG6570413.1 Reactive oxygen species modulator 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010289.1 Reactive oxygen species modulator 1 [Cucurbita argyrosperma subsp. argyrosperma] >KGN48107.1 hypothetical protein Csa_003706 [Cucumis sativus])

HSP 1 Score: 85.5 bits (210), Expect = 7.2e-13
Identity = 62/144 (43.06%), Postives = 62/144 (43.06%), Query Frame = 0 

Query: 1   MARDSCLARVTAGVAVGGAVGGAVGKENPKFSSKFNSVTCRLLIYPCYSLFPFVSRVPSS 60
           MARDSCLARVTAGVAVGGAVGGAVG                                   
Sbjct: 1   MARDSCLARVTAGVAVGGAVGGAVG----------------------------------- 60

Query: 61  GYGLIVVPLLRLLSSYMYGMCWIKEFDISRKLDNWSSCVLASVIEPCAVYGTYEAIRFKV 120
                                                          AVYGTYEAIRFKV
Sbjct: 61  -----------------------------------------------AVYGTYEAIRFKV 62

Query: 121 PGLLKIRYIGQTTLGSAAIFGLFL 145
           PGLLKIRYIGQTTLGSAAIFGLFL
Sbjct: 121 PGLLKIRYIGQTTLGSAAIFGLFL 62

[Close]
BLAST of Clc02G24260 vs. NCBI nr
Match: XP_023876465.1 (reactive oxygen species modulator 1 [Quercus suber] >KAF3969773.1 hypothetical protein CMV_006468 [Castanea mollissima])

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-12
Identity = 61/144 (42.36%), Postives = 62/144 (43.06%), Query Frame = 0 

Query: 1   MARDSCLARVTAGVAVGGAVGGAVGKENPKFSSKFNSVTCRLLIYPCYSLFPFVSRVPSS 60
           MARDSCLARVTAGVAVGGAVGGAVG                                   
Sbjct: 1   MARDSCLARVTAGVAVGGAVGGAVG----------------------------------- 60

Query: 61  GYGLIVVPLLRLLSSYMYGMCWIKEFDISRKLDNWSSCVLASVIEPCAVYGTYEAIRFKV 120
                                                          AVYGTYEAIRFKV
Sbjct: 61  -----------------------------------------------AVYGTYEAIRFKV 62

Query: 121 PGLLKIRYIGQTTLGSAAIFGLFL 145
           PGL+KIRYIGQTTLGSAAIFGLFL
Sbjct: 121 PGLMKIRYIGQTTLGSAAIFGLFL 62

[Close]
BLAST of Clc02G24260 vs. ExPASy TrEMBL
Match: A0A6A6KS69 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_035840 PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-19
Identity = 71/149 (47.65%), Postives = 87/149 (58.39%), Query Frame = 0 

Query: 1   MARDSCLARVTAGVAVGGAVGGAVGKENPKFSSKFNSVTCRLLIYP-----CYSLFPFVS 60
           MARDSCLARVTAGVAVGGAVGGAV   +   + +  +V  RL +        +S F    
Sbjct: 1   MARDSCLARVTAGVAVGGAVGGAVVLRSALGTIRLRTVEIRLELVEEKGSLGWSDFQLFV 60

Query: 61  RVPSSGYGLIVVPLLRLLSSYMYGMCWIKEFDISRKLDNWSSCVLASVIEPCAVYGTYEA 120
           R       L++  ++  LS +   M    +F++  K                AVYGTYEA
Sbjct: 61  RNDGFCLKLVIESIVYCLSDHCVDMRPSSDFNVYNKEK-----------ARMAVYGTYEA 120

Query: 121 IRFKVPGLLKIRYIGQTTLGSAAIFGLFL 145
           IR+KVPGLLKIR+IGQTTLGSAAIFGLFL
Sbjct: 121 IRYKVPGLLKIRHIGQTTLGSAAIFGLFL 138

[Close]
BLAST of Clc02G24260 vs. ExPASy TrEMBL
Match: A0A438KFL7 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_004530 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 9.5e-19
Identity = 75/152 (49.34%), Postives = 87/152 (57.24%), Query Frame = 0 

Query: 1   MARDSCLARVTAGVAVGGAVGGAVG-------KENPKFSSKFNSVTCRLLIYPCYSLFPF 60
           MARDSCLARVTAGVAVGGAVGGAV        +E      K  +VT      P   L   
Sbjct: 1   MARDSCLARVTAGVAVGGAVGGAVVFNAVFGLRETLGMGEKMLNVTSSNFPPPNELLEKL 60

Query: 61  VSRVPSSGYGLI-VVPLLRLLSSYMYGMCWIKEFDISRKLDNWSSCVLASVIEPCAVYGT 120
           ++     G G+I VV  +RL                       ++CV+ S+    AVYGT
Sbjct: 61  LTDDEILGSGMIHVVSTMRLSIG--------------------AACVVLSL---GAVYGT 120

Query: 121 YEAIRFKVPGLLKIRYIGQTTLGSAAIFGLFL 145
           YEAIR+KVPGLLKIRYIGQTTLGSAA+FGLFL
Sbjct: 121 YEAIRYKVPGLLKIRYIGQTTLGSAAVFGLFL 129

[Close]
BLAST of Clc02G24260 vs. ExPASy TrEMBL
Match: A0A803MYA6 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 3.4e-16
Identity = 68/156 (43.59%), Postives = 86/156 (55.13%), Query Frame = 0 

Query: 1   MARDSCLARVTAGVAVGGAVGGAV------GKENPKFSSKFNSVTCRLLIYPCYSLFPFV 60
           MARDSCLARV AGVAVGGAVGGAV      G+      +K   V  +  +  C     F 
Sbjct: 1   MARDSCLARVGAGVAVGGAVGGAVVFGLVRGRMYGCIVAKIMKVKRKARLLNCAD---FR 60

Query: 61  SRVPSSGYGLIVVPLLRLLSSYMYGMCWIKEFDISRKLDNW--SSCV----LASVIEPCA 120
               SS  GL+ +    L  +      W+          +W   SC+    +  +I   A
Sbjct: 61  VVEDSSSIGLLSIVFRNLGLNIPENDIWLPH--------SWIVGSCIKLVEMQRIIIAGA 120

Query: 121 VYGTYEAIRFKVPGLLKIRYIGQTTLGSAAIFGLFL 145
           VYGT++A+R K+PGLLKIR+IGQTT+GSAAIFGLFL
Sbjct: 121 VYGTFDAVRNKIPGLLKIRHIGQTTVGSAAIFGLFL 145

[Close]
BLAST of Clc02G24260 vs. ExPASy TrEMBL
Match: A0A0S3SKR2 (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G234500 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.1e-13
Identity = 64/144 (44.44%), Postives = 77/144 (53.47%), Query Frame = 0 

Query: 1   MARDSCLARVTAGVAVGGAVGGAVGKENPKFSSKFNSVTCRLLIYPCYSLFPFVSRVPSS 60
           MARD+ L RV  G AVGGA+GGAVG+  P            L +   +S    VS+ P  
Sbjct: 1   MARDNVLTRVATGAAVGGAIGGAVGEITPLI----------LCLVTSFS----VSQTPH- 60

Query: 61  GYGLIVVPLLRLLSSYMYGMCWIKEFDISRKLDNWSSCVLASVIEPCAVYGTYEAIRFKV 120
               I   LLRL+ S +             KL          V+   AVYGTY+AIR+KV
Sbjct: 61  ----IFRYLLRLILSIL-------------KL---------GVLHTGAVYGTYDAIRYKV 103

Query: 121 PGLLKIRYIGQTTLGSAAIFGLFL 145
           PG LKIR+IGQTTLGSAA+F LFL
Sbjct: 121 PGFLKIRHIGQTTLGSAAVFSLFL 103

[Close]
BLAST of Clc02G24260 vs. ExPASy TrEMBL
Match: A0A6J1J7H7 (reactive oxygen species modulator 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484176 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 3.5e-13
Identity = 62/144 (43.06%), Postives = 62/144 (43.06%), Query Frame = 0 

Query: 1   MARDSCLARVTAGVAVGGAVGGAVGKENPKFSSKFNSVTCRLLIYPCYSLFPFVSRVPSS 60
           MARDSCLARVTAGVAVGGAVGGAVG                                   
Sbjct: 1   MARDSCLARVTAGVAVGGAVGGAVG----------------------------------- 60

Query: 61  GYGLIVVPLLRLLSSYMYGMCWIKEFDISRKLDNWSSCVLASVIEPCAVYGTYEAIRFKV 120
                                                          AVYGTYEAIRFKV
Sbjct: 61  -----------------------------------------------AVYGTYEAIRFKV 62

Query: 121 PGLLKIRYIGQTTLGSAAIFGLFL 145
           PGLLKIRYIGQTTLGSAAIFGLFL
Sbjct: 121 PGLLKIRYIGQTTLGSAAIFGLFL 62

[Close]
BLAST of Clc02G24260 vs. TAIR 10
Match: AT3G07910.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reactive oxygen species modulator 1 (InterPro:IPR018450); Has 192 Blast hits to 192 proteins in 80 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 6; Plants - 39; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). )

HSP 1 Score: 70.1 bits (170), Expect = 2.9e-12
Identity = 52/144 (36.11%), Postives = 59/144 (40.97%), Query Frame = 0 

Query: 1   MARDSCLARVTAGVAVGGAVGGAVGKENPKFSSKFNSVTCRLLIYPCYSLFPFVSRVPSS 60
           MA++SCLA++TAGVAVGGA+GGAVG                                   
Sbjct: 1   MAKNSCLAKITAGVAVGGALGGAVG----------------------------------- 60

Query: 61  GYGLIVVPLLRLLSSYMYGMCWIKEFDISRKLDNWSSCVLASVIEPCAVYGTYEAIRFKV 120
                                                          AVYGTYEAIR KV
Sbjct: 61  -----------------------------------------------AVYGTYEAIRVKV 62

Query: 121 PGLLKIRYIGQTTLGSAAIFGLFL 145
           PGL K+R+IGQTTL SAAIFGLFL
Sbjct: 121 PGLHKVRFIGQTTLSSAAIFGLFL 62

The following BLAST results are available for this feature:
BLAST of Clc02G24260 vs. NCBI nr
Match NameE-valueIdentityDescription
KAF2291850.13.0e-1947.65hypothetical protein GH714_035840 [Hevea brasiliensis][more]
RVX19981.12.0e-1849.34hypothetical protein CK203_004530 [Vitis vinifera][more]
BAT93392.14.2e-1344.44hypothetical protein VIGAN_07234500 [Vigna angularis var. angularis][more]
XP_004140202.27.2e-1343.06reactive oxygen species modulator 1 [Cucumis sativus] >XP_008449669.1 PREDICTED:... [more]
XP_023876465.11.2e-1242.36reactive oxygen species modulator 1 [Quercus suber] >KAF3969773.1 hypothetical p... [more]
BLAST of Clc02G24260 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Clc02G24260 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6A6KS691.5e-1947.65Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_035840 PE=3 SV=1[more]
A0A438KFL79.5e-1949.34Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_004530 PE=3 SV=1[more]
A0A803MYA63.4e-1643.59Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1[more]
A0A0S3SKR22.1e-1344.44Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G... [more]
A0A6J1J7H73.5e-1343.06reactive oxygen species modulator 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LO... [more]
BLAST of Clc02G24260 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G07910.12.9e-1236.11FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018450Romo1/Mgr2SMARTSM01378Romo1_2coord: 4..144
e-value: 2.5E-6
score: 37.0
IPR018450Romo1/Mgr2PFAMPF10247Romo1coord: 107..144
e-value: 5.5E-8
score: 33.1
IPR018450Romo1/Mgr2PANTHERPTHR28525REACTIVE OXYGEN SPECIES MODULATOR 1coord: 1..26
coord: 108..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 207..225
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 207..226
NoneNo IPR availablePANTHERPTHR28525:SF6BNAC03G35570D PROTEINcoord: 108..144
NoneNo IPR availablePANTHERPTHR28525:SF6BNAC03G35570D PROTEINcoord: 1..26

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc02G24260.2Clc02G24260.2mRNA