Clc02G24090 (gene) Watermelon (cordophanus) v2

Overview
NameClc02G24090
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionAvrRpt-cleavage domain-containing protein
LocationClcChr02: 35988952 .. 35992173 (-)
RNA-Seq ExpressionClc02G24090
SyntenyClc02G24090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGCCATGGAGGAAGGTTTCTTTGGAGCTTTTTTGGGAGATGAGAAACTGCGAGAAAATTCGAAATGCGGGAAATCTCGGAGACGGGGTGATTTATGTCATTTTAATTTGGTATTTATCGTATTTCAAGAAAGAAAGAAAAAAAATAATTATCTACAATGGGCCTCAAGGAGCAGGCCCATCAATTTTTATGGGCTTGGATATCCAAGCAAAGTGGGCTGGGTCCGACTTCGCCCCATTAGGCAACCAGCTACAGCTAGTTACCTTCTTCATCGAAAATTATCGAAAAATACTAACAATGCATCAGCTCGTTTTAAGCTCGTTTTTGTGACAAGTATTCGATCACAGGTACTCATGTAACAAATTTTTCTTTCTTTAAAAAATACATATTTTTTAAAATATTTTTTCCTTTGTAATTAACTAATACAAAGTTATCATAATGACCTCATGTTATTTATATAAATAAACAATGACCTAATCGGAAGATGATTTAAATTTAAAATGACAAAGCCAATAATATAATATATTTAAAATAAAAATTTTCTTATCCATATTGGTTAGAAAAATAAAAAAGAGTAAACAAGGAAATATTTACACGAAGTGGTGATTTTAATGATGAGGTAACATAATGACGTTGTGTGTATATATTAATGATGAGGTAACATAATGATGAGATAACCCGTTTTTTGCCCTAAGAACTGTCTCTCTCATGCTAAATAAAGGAGAGATCTATTTTAATAAATGAAACGATTGTTGGAAAAACACAATTGGTTTTTAATTTTTTCTTTTTTTTAGATAAAGAAGTTTTTTATTTTGATTTTGATTTTGATTTTTATTTTTTGATGGTTTCTAATTTGGATGTGCCTATTTTGAAGTTGTTTGTATTTAGAACAAACATATATAAAGAGATGGAAGTTTTTTATTTGAAGATTTCTCCCATTCATTTTCCCTCTCTGTTACAGGTCTCCTGCCTCTCCTTCCCCTCTTGAGACCCTATGGATTCTCGGACGGAGGTAATTTTTTCCTTTTTTCTTTTTTCTTTTTTTTTGGAAATAATATTTTTCCTCTCTTGATAATCCCATTAATTTATTGATCATTATCTAATGATTATGCCATGAGTTTATTTCAATTCCCATCCCTTTTGTTTTACTTTTCATTGTTTAGATTATGCTTTGAAATCCAAATCAATTGGAGTTTGAACTCTGGACTTTAAATCTTTCAAACTTTCAATGCTATATTAATTTCAAGTTGTATTATTAAGATCTCCAAAGAAAGAAAAGGAAGCATTTAGAAGATAATTGTGGCTCATGGTTTCATCAATTTATGTTTTTGCAGGTAATTGATAAATTTATGTATGATGATTTGGCTTGAAACTTTGGGAATCTTTTGTATTTAAATTAGGTAGATGAATGAATTATATAGAAACTCAATCAAAAATCTAATCAAGAGATGTTAATCTTCTAAGATTTCCAGATAAAAATTAGAAAAATTTCACCAAGAACATCCATAGGTTTTTTCTGAGATAGAAAGGAAAAAACTTTCCTGGAATTTCCCCTCTTTTTCTTTTTCTTTCTTTTCTCTATCCTAATTCAAGAGAATTATTGTATTTAATTCTCTTGCATCTGGACCAATTCCTGGCAAAAACAACCTAAAAATCAATCAAAATCACAAAAATGTGAGGTGGGGAAGAGAAATATGATGAATCCATTTGAAAATGCAACTGAAAGTTTGGTTGGTGTGTGTGTGTGTGTGTTTATGCAGAACAATAGGTGGAGATCTGTTCCAGAATTTGGGGGTTGGGATCACAATGCGCCCGGAGCAAGCAATTATTCTGTTGTGTTTTCTCAAGCTCGTGCCAATAGGAAACAGCAAAAAACTGACTTAACTGAGTTCAAAAGAACCAGCCTAGGGAATGAAAGGGAGTTAATGGCAAGCGCGGATAAGCATCATCGTCAACAAAAACATCACCACCATTGCCATCATCACCGCCATGAACACCAACACCAACATCGCCCCCGTCACCACCAACATCATCATCAACCACCTGCAGATGACTCTGTTGTCCCAGTAAGCATTTTTGTTTTTTTGTATTTGTACAAATAAGTGAAAAAAATGAGGATTTGAACCTCCAACTTAAAAAAGAATGAGTACTTGCCAATTATTGATGAGCTATGCTTACTTTGGCTTGCATCGGTTGTTCTTTTCCCACTTTAATCTCACAGTCAAATCTTGAACTATCTAATTTTTTTTTCTTCTAGGGAACAACCCACTTGACTCTGCAATGTTTTTGTGCAAAAATAAAAAAAAAAAATAAATAAATAAATCCTAGGTTGGGACACAAGTTGAACTTATTCAGTTCTTTATCAAAACCATGTTCATCTTCAACGGGTTAATCCAAACTCTGAACTTAATGAAGCAAACCAAGGTTGAACAAGAATTAAAATGTAATATTTGAAAACAGAAACTGAAGAAAATTTGTATAGAACGTAGTACCTGTTGGATACTGAGGCTGAGGAACAGATGCTGTATCTATCCCTTGATGGAGGGTTATTTATTTTGCTATCCATGATGGTGGCAACTTCATTTATCGCCTTCTGTGAAGTTACCCTTCCAGTAATTAGAGCTTTTCCCCAAGTTTAACCACAGCTAAACTTCAAAGTAATACACAATTATCTCATAATTAAGATACAATTCTTAATAGGTAGTGTCTTGTTCCAGCATACAAGGAACATAAGGATATTTGTAATAGAAATTATAATAGCAGGCTATCATGGATTTGATATTGACCAAAAAATTAATAGTAAATAAATAGATAATGAAAATCTCATAGTACAGTATAAGAAACGTGAGTGATTCCATCATAATTTTTTAAAGAAATTAAATTGCTATAAATATTACACATTTAATCCTTGCTCTTTTATTTTTCTCTTATCCAGCAGAAGCAAAAGAAGATTCTGACCTACATCAATTGTTGTATCAGGCCTTGATATGAGACAGAAGCCAATCCACTCCTCTATGTTCTACTCATATCATGCTGTTTTTCTGAATCTTTTTTTTATTATTTTTTACTGGCATGTAAATGTAGATGGGACACGTTCACCATATGGACAATTGCATCAATTTCCCCTTCCCTGCATCTTGTTTAGGTTCTTTAGCTTATAAAACATGGAACCTTGCAATTTATTTCTTACTTCATGGAGCAAAACAAGATAAATAAACT

mRNA sequence

ATGTGGCCATGGAGGAAGGTTTCTTTGGAGCTTTTTTGGGAGATGAGAAACTGCGAGAAAATTCGAAATGCGGGAAATCTCGGAGACGGGGTGATTTATGTCATTTTAATTTGGCAACCAGCTACAGCTAGTTACCTTCTTCATCGAAAATTATCGAAAAATACTAACAATGCATCAGCTCGTTTTAAGCTCGTTTTTGTGACAAGTATTCGATCACAGAACAATAGGTGGAGATCTGTTCCAGAATTTGGGGGTTGGGATCACAATGCGCCCGGAGCAAGCAATTATTCTGTTGTGTTTTCTCAAGCTCGTGCCAATAGGAAACAGCAAAAAACTGACTTAACTGAGTTCAAAAGAACCAGCCTAGGGAATGAAAGGGAGTTAATGGCAAGCGCGGATAAGCATCATCGTCAACAAAAACATCACCACCATTGCCATCATCACCGCCATGAACACCAACACCAACATCGCCCCCGTCACCACCAACATCATCATCAACCACCTGCAGATGACTCTGTTGTCCCAAAACTGAAGAAAATTTGTATAGAACGTAGTACCTGTTGGATACTGAGGCTGAGGAACAGATGCTGTATCTATCCCTTGATGGAGGCATACAAGGAACATAAGGATATTTTACAGTATAAGAAACCAGAAGCAAAAGAAGATTCTGACCTACATCAATTGTTGTATCAGGCCTTGATATGAGACAGAAGCCAATCCACTCCTCTATGTTCTACTCATATCATGCTGTTTTTCTGAATCTTTTTTTTATTATTTTTTACTGGCATGTAAATGTAGATGGGACACGTTCACCATATGGACAATTGCATCAATTTCCCCTTCCCTGCATCTTGTTTAGGTTCTTTAGCTTATAAAACATGGAACCTTGCAATTTATTTCTTACTTCATGGAGCAAAACAAGATAAATAAACT

Coding sequence (CDS)

ATGTGGCCATGGAGGAAGGTTTCTTTGGAGCTTTTTTGGGAGATGAGAAACTGCGAGAAAATTCGAAATGCGGGAAATCTCGGAGACGGGGTGATTTATGTCATTTTAATTTGGCAACCAGCTACAGCTAGTTACCTTCTTCATCGAAAATTATCGAAAAATACTAACAATGCATCAGCTCGTTTTAAGCTCGTTTTTGTGACAAGTATTCGATCACAGAACAATAGGTGGAGATCTGTTCCAGAATTTGGGGGTTGGGATCACAATGCGCCCGGAGCAAGCAATTATTCTGTTGTGTTTTCTCAAGCTCGTGCCAATAGGAAACAGCAAAAAACTGACTTAACTGAGTTCAAAAGAACCAGCCTAGGGAATGAAAGGGAGTTAATGGCAAGCGCGGATAAGCATCATCGTCAACAAAAACATCACCACCATTGCCATCATCACCGCCATGAACACCAACACCAACATCGCCCCCGTCACCACCAACATCATCATCAACCACCTGCAGATGACTCTGTTGTCCCAAAACTGAAGAAAATTTGTATAGAACGTAGTACCTGTTGGATACTGAGGCTGAGGAACAGATGCTGTATCTATCCCTTGATGGAGGCATACAAGGAACATAAGGATATTTTACAGTATAAGAAACCAGAAGCAAAAGAAGATTCTGACCTACATCAATTGTTGTATCAGGCCTTGATATGA

Protein sequence

MWPWRKVSLELFWEMRNCEKIRNAGNLGDGVIYVILIWQPATASYLLHRKLSKNTNNASARFKLVFVTSIRSQNNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMASADKHHRQQKHHHHCHHHRHEHQHQHRPRHHQHHHQPPADDSVVPKLKKICIERSTCWILRLRNRCCIYPLMEAYKEHKDILQYKKPEAKEDSDLHQLLYQALI
Homology
BLAST of Clc02G24090 vs. NCBI nr
Match: XP_038901152.1 (lateral signaling target protein 2 homolog isoform X2 [Benincasa hispida])

HSP 1 Score: 171.4 bits (433), Expect = 9.2e-39
Identity = 94/120 (78.33%), Postives = 102/120 (85.00%), Query Frame = 0

Query: 71  RSQNNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMA 130
           R++ NRWRSVPEFGGWDHNAPGASNYSVVF+QARA+RKQ+KTDLTEFKRTSLGNERELMA
Sbjct: 4   RTEKNRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQRKTDLTEFKRTSLGNERELMA 63

Query: 131 SADKHHRQQKHHHHCHHHRHE--HQHQHRPRHHQHH-HQPPADDSVVPKLKKICIERSTC 188
           +  K HR QKHHHH HHH HE  HQHQH+ RHH HH HQPPADDSVVPK KKI    + C
Sbjct: 64  ATGKCHRHQKHHHHRHHHHHEQQHQHQHQHRHHHHHRHQPPADDSVVPKKKKILTYINCC 123

BLAST of Clc02G24090 vs. NCBI nr
Match: XP_038901151.1 (lateral signaling target protein 2 homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 169.5 bits (428), Expect = 3.5e-38
Identity = 93/122 (76.23%), Postives = 102/122 (83.61%), Query Frame = 0

Query: 71  RSQNNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMA 130
           R++ NRWRSVPEFGGWDHNAPGASNYSVVF+QARA+RKQ+KTDLTEFKRTSLGNERELMA
Sbjct: 4   RTEKNRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQRKTDLTEFKRTSLGNERELMA 63

Query: 131 SADKHHRQQKHHHHCHHHRHE--HQHQHRPRHHQHH-HQPPADDSVVPKLKKICIERSTC 190
           +  K HR QKHHHH HHH HE  HQHQH+ RHH HH HQPPADDSVVP+ KK  +    C
Sbjct: 64  ATGKCHRHQKHHHHRHHHHHEQQHQHQHQHRHHHHHRHQPPADDSVVPQKKKKILTYINC 123

BLAST of Clc02G24090 vs. NCBI nr
Match: KAE8647369.1 (hypothetical protein Csa_004264 [Cucumis sativus])

HSP 1 Score: 158.7 bits (400), Expect = 6.2e-35
Identity = 85/114 (74.56%), Postives = 94/114 (82.46%), Query Frame = 0

Query: 71  RSQNNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMA 130
           R +NNRWRSVPEFGGWDHNAPGASNYSVVF+QARA+RKQQKTDLTEFK+TSLGNE+ELM 
Sbjct: 4   RKENNRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQQKTDLTEFKKTSLGNEKELME 63

Query: 131 SADKHHRQQKH--------HHHCHHHRHEHQHQHRPRHHQHHHQ-PPADDSVVP 176
           + DKHHR QKH        HHH HHH H+H H+H+  HHQHHHQ PP DDSV P
Sbjct: 64  AVDKHHRHQKHRHHRHRHRHHHHHHHDHDHDHEHQHHHHQHHHQSPPGDDSVGP 117

BLAST of Clc02G24090 vs. NCBI nr
Match: KAG6605945.1 (hypothetical protein SDJN03_03262, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035891.1 hypothetical protein SDJN02_02690, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 140.6 bits (353), Expect = 1.7e-29
Identity = 81/119 (68.07%), Postives = 93/119 (78.15%), Query Frame = 0

Query: 73  QNNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMASA 132
           +NNRW+SVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKR SLGNERE+MA A
Sbjct: 7   KNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMMAMA 66

Query: 133 DKHHRQQKHHHHCHHHRHEH--QHQHRPRHHQHHHQPPADDSVVPKLKKICIERSTCWI 190
           DKH RQQ HHHH HH  + H  +++H P+ +QH  +P   D VVP+ KK  +    C I
Sbjct: 67  DKHLRQQNHHHHRHHSHNSHHSRYEHHPQ-YQHRLRPHQHDPVVPQKKKKILTYINCCI 124

BLAST of Clc02G24090 vs. NCBI nr
Match: XP_022985820.1 (dendritic arbor reduction protein 1 isoform X2 [Cucurbita maxima])

HSP 1 Score: 138.3 bits (347), Expect = 8.6e-29
Identity = 81/114 (71.05%), Postives = 88/114 (77.19%), Query Frame = 0

Query: 75  NRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMASADK 134
           NRW+SVPEFGGWD+N P ASNYSVVFS+ARAN+KQQKTDLTEFKR SLGNE+ELMA ADK
Sbjct: 7   NRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKELMAIADK 66

Query: 135 HHRQQKHHHHCHHHRHEHQHQ-HRPRHHQHHHQPPADDSVVPKLKKICIERSTC 188
           H R     HH HHHR EH+HQ H  RHH HH Q PAD +VV K KKI    S C
Sbjct: 67  HDR-----HHQHHHRREHRHQHHHHRHHPHHGQLPADGAVVGKKKKILSCMSCC 115

BLAST of Clc02G24090 vs. ExPASy TrEMBL
Match: A0A0A0KK09 (AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G430670 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 7.1e-37
Identity = 89/128 (69.53%), Postives = 100/128 (78.12%), Query Frame = 0

Query: 71  RSQNNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMA 130
           R +NNRWRSVPEFGGWDHNAPGASNYSVVF+QARA+RKQQKTDLTEFK+TSLGNE+ELM 
Sbjct: 4   RKENNRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQQKTDLTEFKKTSLGNEKELME 63

Query: 131 SADKHHRQQKH--------HHHCHHHRHEHQHQHRPRHHQHHHQ-PPADDSVVPKLKKIC 190
           + DKHHR QKH        HHH HHH H+H H+H+  HHQHHHQ PP DDSV P+ KK  
Sbjct: 64  AVDKHHRHQKHRHHRHRHRHHHHHHHDHDHDHEHQHHHHQHHHQSPPGDDSVGPEKKKKI 123

BLAST of Clc02G24090 vs. ExPASy TrEMBL
Match: A0A6J1JCC4 (dendritic arbor reduction protein 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483749 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 4.2e-29
Identity = 81/114 (71.05%), Postives = 88/114 (77.19%), Query Frame = 0

Query: 75  NRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMASADK 134
           NRW+SVPEFGGWD+N P ASNYSVVFS+ARAN+KQQKTDLTEFKR SLGNE+ELMA ADK
Sbjct: 7   NRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKELMAIADK 66

Query: 135 HHRQQKHHHHCHHHRHEHQHQ-HRPRHHQHHHQPPADDSVVPKLKKICIERSTC 188
           H R     HH HHHR EH+HQ H  RHH HH Q PAD +VV K KKI    S C
Sbjct: 67  HDR-----HHQHHHRREHRHQHHHHRHHPHHGQLPADGAVVGKKKKILSCMSCC 115

BLAST of Clc02G24090 vs. ExPASy TrEMBL
Match: A0A6J1DJD7 (lateral signaling target protein 2 homolog OS=Momordica charantia OX=3673 GN=LOC111020600 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 9.3e-29
Identity = 80/102 (78.43%), Postives = 86/102 (84.31%), Query Frame = 0

Query: 73  QNNRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMASA 132
           + N WRSVPEFGGWDHNAPGASNYSVVF+QARANRKQQKTDLTEFKR+SLGNERELMA+A
Sbjct: 5   KENGWRSVPEFGGWDHNAPGASNYSVVFTQARANRKQQKTDLTEFKRSSLGNERELMAAA 64

Query: 133 DKHHRQQKHHHHCHHHRHEHQHQH-RPRHHQHHHQPPADDSV 174
                QQKH H  H HRHEHQ+QH R  HHQHHHQ  ADDS+
Sbjct: 65  G---HQQKHRHQ-HRHRHEHQNQHRRHHHHQHHHQAAADDSI 102

BLAST of Clc02G24090 vs. ExPASy TrEMBL
Match: A0A6J1JEB9 (dendritic arbor reduction protein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483749 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.1e-28
Identity = 79/116 (68.10%), Postives = 89/116 (76.72%), Query Frame = 0

Query: 75  NRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMASADK 134
           NRW+SVPEFGGWD+N P ASNYSVVFS+ARAN+KQQKTDLTEFKR SLGNE+ELMA ADK
Sbjct: 7   NRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKELMAIADK 66

Query: 135 HHRQQKHHHHCHHHRHEHQHQ-HRPRHHQHHHQPPADDSVVPKLKKICIERSTCWI 190
           H R     HH HHHR EH+HQ H  RHH HH Q PAD +VV + KK  +   +C I
Sbjct: 67  HDR-----HHQHHHRREHRHQHHHHRHHPHHGQLPADGAVVGQKKKKILSCMSCCI 117

BLAST of Clc02G24090 vs. ExPASy TrEMBL
Match: A0A6J1FX29 (dendritic arbor reduction protein 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448272 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.5e-26
Identity = 77/113 (68.14%), Postives = 84/113 (74.34%), Query Frame = 0

Query: 75  NRWRSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELMASADK 134
           NRW+SVPEFGGWD+N P ASNYSVVFS+ARAN+KQQKTDLTEFKR SLGNE+ELMA ADK
Sbjct: 7   NRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEKELMAIADK 66

Query: 135 HHRQQKHHHHCHHHRHEHQHQHRPRHHQHHHQPPADDSVVPKLKKICIERSTC 188
           H R   HH H H H H  QH H+ RHH HH Q P   +VV K KKI    S C
Sbjct: 67  HDR---HHQHRHRHEHRQQHHHQ-RHHPHHGQLPVGGAVVGKKKKILSCMSCC 115

BLAST of Clc02G24090 vs. TAIR 10
Match: AT5G19473.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 69.7 bits (169), Expect = 3.5e-12
Identity = 50/118 (42.37%), Postives = 64/118 (54.24%), Query Frame = 0

Query: 71  RSQNNRWRSVPEFGGWDHNAPG-ASNYSVVFSQARANRKQQKTDLTEFKRTSLGNERELM 130
           R +N  W  VP+FGGWD   P  A+NYSVVFS+ARANRKQ K  +   + +SLG+E+ELM
Sbjct: 4   RRENAAWTPVPQFGGWDQKGPNDATNYSVVFSKARANRKQNKAGV---RHSSLGSEQELM 63

Query: 131 ASADKHHRQQKHHHHCHHHRHEHQHQHRPRHHQHHHQPPADDSVVPKLKKICIERSTC 188
            S  ++H+Q        HHRHE Q                DD  V K K+I    + C
Sbjct: 64  VSVRRNHQQL-------HHRHETQ----------------DDDPVMKKKRILTYINCC 95

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038901152.19.2e-3978.33lateral signaling target protein 2 homolog isoform X2 [Benincasa hispida][more]
XP_038901151.13.5e-3876.23lateral signaling target protein 2 homolog isoform X1 [Benincasa hispida][more]
KAE8647369.16.2e-3574.56hypothetical protein Csa_004264 [Cucumis sativus][more]
KAG6605945.11.7e-2968.07hypothetical protein SDJN03_03262, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022985820.18.6e-2971.05dendritic arbor reduction protein 1 isoform X2 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KK097.1e-3769.53AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G43... [more]
A0A6J1JCC44.2e-2971.05dendritic arbor reduction protein 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1DJD79.3e-2978.43lateral signaling target protein 2 homolog OS=Momordica charantia OX=3673 GN=LOC... [more]
A0A6J1JEB92.1e-2868.10dendritic arbor reduction protein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1FX292.5e-2668.14dendritic arbor reduction protein 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=... [more]
Match NameE-valueIdentityDescription
AT5G19473.13.5e-1242.37RPM1-interacting protein 4 (RIN4) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008700RIN4, pathogenic type III effector avirulence factor Avr cleavage sitePFAMPF05627AvrRpt-cleavagecoord: 76..108
e-value: 5.0E-8
score: 32.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..172
NoneNo IPR availablePANTHERPTHR33882PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEINcoord: 72..168

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc02G24090.2Clc02G24090.2mRNA