Clc02G23830 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G23830
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	YABBY2-like transcription factor YAB2
Location	ClcChr02: 35744271 .. 35750573 (-)
RNA-Seq Expression	Clc02G23830
Synteny	Clc02G23830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTCTTCTTCTTCTTCTTCCTCTCCTCACAGATCATATATAGACACAAAACTCAATTTAGGTAGGTTGCTTCATTTTCTTCCCTTTCTTTTTCCTTTTCAATTTTGTTTTAAAGGAGTGTCTTAATTATTTCTGATTTGGGTTTTTCTTTTTTCTTTTTTCTTTAACATATAAATATTTAAAAGATATTTGTGAAGAAAGAAAGAAAGAAAGAAAGATTATAAATCAATCTGTAGCAAAGAAATGTCACTGGACATGATGGCATCAGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTTTAGCGGTACAAAACCTCCACCTTTCTATCTTTATTTATATATCTATTTCCATTTATTTATTTATTTATTTTTCCATTCTGTCATTACTTTAAATCTTCCTCTTCCCACCCTTTGATTTGACAATTTCTCTTTCTTTCTCAAACTTTTTTTTTTTTCTTTTTTAATGAAATTTTATGAATGTTGTGTATTAATATATAGTAATATGTGTGTTTGTGTGTGTGTGTTTTAATGACTGGCTACAGTACTTTCGTTTTCAGCTGAAAAGACCAGCAAAATTTGTTCACTTTATCAAATTCAGACTGTTGGAGGAAAAAAAAAGCGTATATGTATGTATATATTTCAAACCAAATCATAGTTTTGTTCTTTTTACTGTTGGAATCTTGAAACACTGGTAACAAATTGTAAGATCTTTTGATATTTTTCTCGATAAATCTGCCAAGAAAAAAAAAAAAAAAACTGTTTTAAAAGCATATATTTTATGAGGAATTTTTCATCTGGGTTTCTAACCAAACCCTCAGATGTGTACAGATTTTCCTTCCAAAAAAGGTTGAAAAAATTAGCCAAATTTGTTGGCATCTTTGAGGAATTTTCAGAGAAAATTGAAGTGAAATTCTAGCTTTTAAAACAAGAAAATGAAGTGCAAGTTAGGGTTCTTGATTTTTCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTGTTGGGGTAGATTATTATTCTCCAAGTCAAGCTCAAAATTAGGTCATGGGTAATTAATTACATGTGATGAATGAGGATCTGATCTCTCTCTCCTCTCAATTTAACGCTTTTTTAAATGACATACTTTAATCAAGTGAATTATGTTTAGATTGACGTAACTGTTCCTATAGAATCTCTCTCGATTATTAAAACAAAAACTATATCCCAATTCTTGCAAGCTTCAACCCCAGATTCTTCTCATACTGAAAATTTGTTGTCTCTCCATTTTTGGAGAGAGAGAGAGAGTAAACGCCTTTTTTTTTTTCAATCCTTTCCTACAAAATATACACACACACACACACACACAAAAGCCTGTTAATTTCAGAAGCAACATTTACCCAATTTTCCCTAAACCAAAATTTCATATTCGAGATTGGTAAGAGGTGCTTGTAGAGTGGAGTAATAACACAGAATTTTTTAGGTCTAGAGTTTGTTGATCACGAGGATTTTCTTTTTTTTGTTTGTTTGTTTGTTTTTTTTTTTTTTTTCTCTTCTTTAATGGACTTGACTCTATGGTTTCCGTTCCAGTCATGTCGTTTTCCCATCTTTTTATCTCTCTTTCTTTAATCTAAATTTTCTATCTTTTATCTTCTTGCTTGCGGTGGTGTCAGATTGAAAGTCAGTAAGAGCCACCATTGAAAAACATGTTTTTTGAAGAGATAATTTTGGCTTTGTGTGTTATAATTTAAAACATAACCAAATTCTTATTTATTATGGGAAATTAATGTAAGGTAACAAAGATAATATGAGAAATGTGAATGTTTTGTTGGAGACAGGTAAGTGTTCCATGCAACAGCATGTTCACACTTGTGACTGTGAGATGTGGCCATTGTTCAAATCTGTTGTCTGTAAACATGGGAGCTTCTCTTCAAGTTGTTCCTCCTCAAGATTCCCAACAGGTATAATACATCAAAATTTCACTCCATTTCTTATTTTATTGCACACCAATTTCAAATTAATTTTAGAAAAAAAATACTTTTCTAGTACTTAAATTTCAAAATGTTACATTTTAGTTCTTAAATTTTGAGTTTAATTTCAATTTAGTTCCTACGTTTCAAAATATAATAATTTTACCCTTGAGATTTGAATTTTGTTTCAATTTAGTCTCTATATTTTAAGATTTATACCTTTTAACCTTAATTTTTTATTAAATATTCACTTTGAGTCTTTAGTGTTAATGTTTATTAATTAATTTAGAAGAATTTTAATTAATTAAGTTTTGCTATTAAAATTAATTTTAAAATTCCACTGAAGTAAGAATCCAACTTGAAGGCCTAAGAACCAAATTAAAGTAAAACTCAAAATTTAAGGACAAAAAATGTAACATTTTGTAGGGACTAAATGGAAATTAGACCCGAAACTTAGGGACCAAAAACATATTTTTCCTCCTCATTTTAATACATTTCTTATTATCGTGTTTGTCTCTTCTTTTACATATGAATGAAATATTATTTATATTTTTCTAATTTAGGTAGATTAAATATTTTTGGTTTAGGTATATATAGTAATGTATTTGTTTGTGTCTATGTTTTAGGGTCATAAACAGCAGCAGGTGAATGCTGGGGATTCAAGTAAGGACAGAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAAATGCACTAAAATTGGCTCTCTTGATTCTGCTGAACGTGACCAACATAGAATCCCTCCTATTCGCCGTGAGTTTTTTTTTCTTCTTCTTCTTCTTTTTTAACTTCATAATGAAGATTATTTTGAATTAAATGAGAACAAATTAAATAAGTAAATTTAATGGTGAATGAAAAATTAAATAGCCACATTAAGTTTATTTCAACTATATCATAATTTAATTGCCAAAACCAACCACCCTATATACTTATCTAATCTCTATCTCTCTCTTTCTTTATGCATATTAATTGAAGCAAAATATTTGTTGAAGTTTTATTGAGGGTTGCATTTTGATAATTATTCGGGTTTTAACCATGATTTATCTTTATAAAATAAATATTTGGATTGTGGTTAAAAGTAAATTTTTAAAAACTATTTTAGTTCTTTAGTTCTTAAATCTGGGTTTGGATTTAAAAAATAAATAAAACGGTGGAAACCATGTTTATAAACTTATGTTTTAAAAATTAAATACTAAATAGTTATAAATCGGACATTATGATTTCAAAGACGTACTATTGTTTTCAGAGAGGTAGATTGGGATATAAATACATTGGTAATAAATGAACTTCTTTTATAAAATAAAAAGTGGAAAACATAATAATCACTTGGAATTTATGTTACCATGGACAAAAATTGTCTCTTCCTTGCTAATTAAAAATGATTTTTTTTTCAAACTTTATGGTGTAGTCTTTTTACTAGTTTATACATTGTTTTTTCTTTTTCAATGAATTAGGTGAATTGTACTAATTTTTATATATATATCGTAAATAAACTACATGAAAATGTAAACTGTCGTAGTTCTTACTTATTGGTTTGAAGACAGGAATATGAAAAGAAAGAAGAAGCATGTGGAGGGTTTATATTTAATTAATATTGGTTTCCATTTTACTCGTTCAACTTTCAACCTCAACCGAACTTAATTAGTAGGTAGAGAGTAAAATGAAAAGAGTAAACAAGATTTTGAAAATGAAAAAGTTTAACGACTAAAATGAGTAAAGAAAAAAAAAATCCTAATTTTAGTCGTTAAATTTATGCATTTTTAAAATCTTCGGTTTTGATCCTTAAACTTTCAAGTTCTTTCCTGAACTTTTAAAAACAATCCTATTTACTTTGACCGTGTCATGTATGTTTTTTTCTATAAAATATTCGTCTTATATATGTATATATGTTTGTGTCTAATTTATTTGGTTTTTTACCATGCTTTCACAAGTATAAGGATCGAAATAATTTTTTTTTTTTTTGTCAAAGTTAAAGGACTATCGAGACTTTGGATGAAAAAAAAAATAGAAGAAATTTATGTACTAAAATAAAATTTAAACCTGACTTATTTGTAAAGAAGGGGCAGTACTGAGTAGTTATTACAAAAATGACATGGCATATCTAATAACTTCCTAATGAAATTAAATGAAATTAATTTGTGTGTGTGTATATATAAATTTATTTTTTGGATATTAATTCTTAGATGCATATGAATGTGGCCCTATCTTGGATGTTGACCATACACACATAATAGAATCTGACCCATCAATATCATGGGCCATTCTCTATACATATATGTGTTGTTCCGTATGTATGTAAGTATGTATGCTATGTATTGGTTATTTTGGTTATTAACACTTAGCACAAAAATATGAAAATAACTGTAACACACCCATTTTTCTGAATTGTCTTTCACTTATTTGTCACATGTCATTGATTCCTCTGCTCTTTTTTCTTTTCCATTTTCCATTTTTTTTTTCTTAAACATTTGATATTTTGGATGTTCTATAGACATAAGATAATGTTTGTTCGTTTTCTTTTATGGTAAACTCAGGCTAGCTAATCTCTATCAAAATTAAGATACTCATGCATTTAACATATAGGCATTAAAGTTTAAGTCGTTTGGATTATTATTATTGTAACAGACTTAGTTTTATTGTTGAGAATTAGTATATCATTAATAATAAATGTAGCAGAAAATGGATGTTAGTTGTTATTGTTTTGAGTAATTTAAGAATGGGTTTTGGATGTTGGCAGCACCAGAGAAAAGACAGCGAGTTCCTTCGGCGTATAATAGGTTCATCAAGTAAGTTGATTTGCTTAATTGGGGTATTAATTAACCATAATTAATTTCTTTTTTGTTTATGATTTGAATATATGTGTTTTTTTGGTTGCAAAATTAATTAATTAAATGTGGGACTTTGTAGAGAGGAAATCCAAAGGATTAAGGCTAAGAATCCTGACATAAGCCACAGAGAAGCCTTTAGCACAGCAGCTAAAAATGTAAGTACTTATAGCTTCTGCCTTTTAATTTGCTTATGTAATTAATAATCCTTGCTGCCTTGTTTTCTTTTGTTTCCATGCTGTCTTTGGATAATGTTTGACATAAGCCTAATTTCTAAATCATTTTTTAAAAATGGTTAAAAAAAAATTGTTTTCGAATATAAAAAAAATGAACCAAAATATTTAATGTAGGAGAATTTTACTATCTTTCTGCACAGATGGACACAAATAGTAGTCTATTGCAGTCTATCACAGATAGAGTGTAATATTTTGCTATTATTTGTAAATATTTTCAACAGTTTTGTTATTTAAAGTAATTTCTCTAAAAAAAACTCTAAATGGGAGAGCTTTTCTCTAGCGATTCTCTCTTGTATCTCATTTTGATTAAAAAAGTATTTTCTAGGTGCGATCATACCAGCATTGATGTAGCAGATTCCATTAGAACTCCGTAGTTAAGTGTGTTGGGCAAAAGTAATATTAAGTTGGGTGACCACTTGAAAAAATTCTTGTGTTGCACCCCTTTTAAAATTAATGAAATATTTTCTATAAAAAAATCTAAAAATAAATTGAAATTTAAAAAAAAAAAAAAACACAAAGTAGAAGTAATCAGTAGGTATATCAAAATATCTCAACTAAGTTGAACGTTTGCTATTTTATTTTCAATAATGTCATATTTACTATGTTATGATTGTCTTAAATACATAGAGATCCATATTTAAAGATTATGATAAAAGATATAAATATCAAAATATAACATTGGAGACAGATAAAAGTTATTTATTTATTATTTTTTAGATAGGAAATGTTGTTTTATTAGGTGTATGTGACAATACAAGAAAATTTGAGTAGGAAAAGTTTGATTCAAACCCTTTTTCTTGACATATATTCATAGCTCTAGTCTTACACGTATTTTTTCTTTTTCTTTTTCAATGAAATATTGAATATACGTAGGAGTAAAAAAATTTGAATTAAGATGATTTCTTTGAGTTTATCTTTTTCATGATATGACTTTTTGATGGAGTTGAACATATTCAACTTGACTTGGGAACTTAATCCCAATAAATATTGATTAAAGTGATTGATTAAATGATTAATCCTCCTAACTATTACTGAGTTTTTTTTTTTTTTTTTTAATTTTGCAGTGGGCACATTTTCCTCATATTCACTTTGGGCTGAAGCTGGATGGAAATAAGCAAACAAAATAAAGTTTGAATATTTTGACAAGAAATCATCACAGTCCATCCAAATCTCCAATGGGGTTCTGCCACCTGTTAATTCTAGAGATGATGATGTGTCAATAGTAAAATACTAAATAAAACACCCTTTTTT

mRNA sequence

TTCTTCTTCTTCTTCTTCTTCCTCTCCTCACAGATCATATATAGACACAAAACTCAATTTAGATATTTGTGAAGAAAGAAAGAAAGAAAGAAAGATTATAAATCAATCTGTAGCAAAGAAATGTCACTGGACATGATGGCATCAGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTTTAGCGCTGAAAAGACCAGCAAAATTTGTTCACTTTATCAAATTCAGACTGTTGGAGGAAAAAAAAAGCGTATATGTAAGTGTTCCATGCAACAGCATGTTCACACTTGTGACTGTGAGATGTGGCCATTGTTCAAATCTGTTGTCTGTAAACATGGGAGCTTCTCTTCAAGTTGTTCCTCCTCAAGATTCCCAACAGGGTCATAAACAGCAGCAGGTGAATGCTGGGGATTCAAGTAAGGACAGAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAAATGCACTAAAATTGGCTCTCTTGATTCTGCTGAACGTGACCAACATAGAATCCCTCCTATTCGCCCACCAGAGAAAAGACAGCGAGTTCCTTCGGCGTATAATAGGTTCATCAAAGAGGAAATCCAAAGGATTAAGGCTAAGAATCCTGACATAAGCCACAGAGAAGCCTTTAGCACAGCAGCTAAAAATTGGGCACATTTTCCTCATATTCACTTTGGGCTGAAGCTGGATGGAAATAAGCAAACAAAATAAAGTTTGAATATTTTGACAAGAAATCATCACAGTCCATCCAAATCTCCAATGGGGTTCTGCCACCTGTTAATTCTAGAGATGATGATGTGTCAATAGTAAAATACTAAATAAAACACCCTTTTTT

Coding sequence (CDS)

ATGTCACTGGACATGATGGCATCAGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTTTAGCGCTGAAAAGACCAGCAAAATTTGTTCACTTTATCAAATTCAGACTGTTGGAGGAAAAAAAAAGCGTATATGTAAGTGTTCCATGCAACAGCATGTTCACACTTGTGACTGTGAGATGTGGCCATTGTTCAAATCTGTTGTCTGTAAACATGGGAGCTTCTCTTCAAGTTGTTCCTCCTCAAGATTCCCAACAGGGTCATAAACAGCAGCAGGTGAATGCTGGGGATTCAAGTAAGGACAGAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAAATGCACTAAAATTGGCTCTCTTGATTCTGCTGAACGTGACCAACATAGAATCCCTCCTATTCGCCCACCAGAGAAAAGACAGCGAGTTCCTTCGGCGTATAATAGGTTCATCAAAGAGGAAATCCAAAGGATTAAGGCTAAGAATCCTGACATAAGCCACAGAGAAGCCTTTAGCACAGCAGCTAAAAATTGGGCACATTTTCCTCATATTCACTTTGGGCTGAAGCTGGATGGAAATAAGCAAACAAAATAA

Protein sequence

MSLDMMASERVCYVHCNFCNTILALKRPAKFVHFIKFRLLEEKKSVYVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDRASSSSSSSSSKCTKIGSLDSAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQTK

Homology

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BLAST of Clc02G23830 vs. NCBI nr
Match: XP_038902333.1 (putative axial regulator YABBY 2 isoform X3 [Benincasa hispida])

HSP 1 Score: 325.9 bits (834), Expect = 2.5e-85
Identity = 172/198 (86.87%), Postives = 172/198 (86.87%), Query Frame = 0


Query: 1   MSLDMMASERVCYVHCNFCNTILALKRPAKFVHFIKFRLLEEKKSVYVSVPCNSMFTLVT 60
           MSLDMMASERVCYVHCNFCNTILA                       VSVPCNSMFTLVT
Sbjct: 1   MSLDMMASERVCYVHCNFCNTILA-----------------------VSVPCNSMFTLVT 60

Query: 61  VRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDRASSSSSSSSSKCTKIG 120
           VRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDRA   SSSSSSKCTKIG
Sbjct: 61  VRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDRA---SSSSSSKCTKIG 120

Query: 121 SLDSAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNWA 180
           SLDSAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNWA
Sbjct: 121 SLDSAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNWA 172

Query: 181 HFPHIHFGLKLDGNKQTK 199
           HFPHIHFGLKLDGNKQTK
Sbjct: 181 HFPHIHFGLKLDGNKQTK 172

[Close]

BLAST of Clc02G23830 vs. NCBI nr
Match: XP_004140176.1 (putative axial regulator YABBY 2 [Cucumis sativus] >XP_011657596.1 putative axial regulator YABBY 2 [Cucumis sativus] >KGN48059.1 hypothetical protein Csa_004092 [Cucumis sativus])

HSP 1 Score: 316.2 bits (809), Expect = 2.0e-82
Identity = 170/199 (85.43%), Postives = 171/199 (85.93%), Query Frame = 0


Query: 1   MSLDMMASERVCYVHCNFCNTILALKRPAKFVHFIKFRLLEEKKSVYVSVPCNSMFTLVT 60
           MSLDMMASERVCYVHCNFCNTILA                       VSVPCNSMFTLVT
Sbjct: 1   MSLDMMASERVCYVHCNFCNTILA-----------------------VSVPCNSMFTLVT 60

Query: 61  VRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDRASSSSSSSSSKCTKIG 120
           VRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDRA   SSSSS+K TKIG
Sbjct: 61  VRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDRA---SSSSSTKSTKIG 120

Query: 121 SLD-SAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNW 180
           SLD SAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNW
Sbjct: 121 SLDSSAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNW 173

Query: 181 AHFPHIHFGLKLDGNKQTK 199
           AHFPHIHFGLKLDGNKQTK
Sbjct: 181 AHFPHIHFGLKLDGNKQTK 173

[Close]

BLAST of Clc02G23830 vs. NCBI nr
Match: XP_008449608.1 (PREDICTED: putative axial regulator YABBY 2 [Cucumis melo] >XP_016900784.1 PREDICTED: putative axial regulator YABBY 2 [Cucumis melo])

HSP 1 Score: 311.6 bits (797), Expect = 4.8e-81
Identity = 170/200 (85.00%), Postives = 171/200 (85.50%), Query Frame = 0


Query: 1   MSLDMMASERVCYVHCNFCNTILALKRPAKFVHFIKFRLLEEKKSVYVSVPCNSMFTLVT 60
           MSLDMMASERVCYVHCNFCNTILA                       VSVPCNSMFTLVT
Sbjct: 1   MSLDMMASERVCYVHCNFCNTILA-----------------------VSVPCNSMFTLVT 60

Query: 61  VRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDRASSSSSSSSSKCTKIG 120
           VRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDRA   SSSSS+K TKIG
Sbjct: 61  VRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDRA---SSSSSAKSTKIG 120

Query: 121 SLD-SAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNW 180
           SLD SAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNW
Sbjct: 121 SLDSSAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNW 174

Query: 181 AHFPHIHFGLKLDG-NKQTK 199
           AHFPHIHFGLKLDG NKQTK
Sbjct: 181 AHFPHIHFGLKLDGNNKQTK 174

[Close]

BLAST of Clc02G23830 vs. NCBI nr
Match: XP_022986990.1 (putative axial regulator YABBY 2 isoform X2 [Cucurbita maxima])

HSP 1 Score: 295.0 bits (754), Expect = 4.7e-76
Identity = 156/199 (78.39%), Postives = 167/199 (83.92%), Query Frame = 0


Query: 1   MSLDMMASERVCYVHCNFCNTILALKRPAKFVHFIKFRLLEEKKSVYVSVPCNSMFTLVT 60
           MSL+MMA+ERVCYVHCNFCNTILA                       VSVPCN+MFTLVT
Sbjct: 1   MSLEMMAAERVCYVHCNFCNTILA-----------------------VSVPCNNMFTLVT 60

Query: 61  VRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDR-ASSSSSSSSSKCTKI 120
           VRCGHCSNLLSVNMGAS+QV+PPQDSQ G+KQQQV+ GD SKDR +SSSSSSSSSKCTKI
Sbjct: 61  VRCGHCSNLLSVNMGASVQVLPPQDSQPGNKQQQVSGGDWSKDRGSSSSSSSSSSKCTKI 120

Query: 121 GSLDSAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNW 180
            SLDSAERDQHRIPPIRPPEK+QRVPSAYNRFIKEEIQRIKA NPDISHREAFSTAAKNW
Sbjct: 121 ASLDSAERDQHRIPPIRPPEKKQRVPSAYNRFIKEEIQRIKANNPDISHREAFSTAAKNW 176

Query: 181 AHFPHIHFGLKLDGNKQTK 199
           AH+PHI  G K+DGNKQTK
Sbjct: 181 AHYPHIRCGQKVDGNKQTK 176

[Close]

BLAST of Clc02G23830 vs. NCBI nr
Match: XP_023512204.1 (putative axial regulator YABBY 2 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 293.9 bits (751), Expect = 1.0e-75
Identity = 156/199 (78.39%), Postives = 166/199 (83.42%), Query Frame = 0


Query: 1   MSLDMMASERVCYVHCNFCNTILALKRPAKFVHFIKFRLLEEKKSVYVSVPCNSMFTLVT 60
           MSL+MMA+ERVCYVHCNFCNTILA                       VSVPCN+MFTLVT
Sbjct: 1   MSLEMMAAERVCYVHCNFCNTILA-----------------------VSVPCNNMFTLVT 60

Query: 61  VRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDR-ASSSSSSSSSKCTKI 120
           VRCGHCSNLLSVNMGASLQV+PPQDS  G+KQQQV+ GD SKDR +SSSSSSSSSKCTKI
Sbjct: 61  VRCGHCSNLLSVNMGASLQVLPPQDSPPGNKQQQVSGGDWSKDRGSSSSSSSSSSKCTKI 120

Query: 121 GSLDSAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNW 180
            SLDSAERDQHRIPPIRPPEK+QRVPSAYNRFIKEEIQRIKA NPDISHREAFSTAAKNW
Sbjct: 121 ASLDSAERDQHRIPPIRPPEKKQRVPSAYNRFIKEEIQRIKANNPDISHREAFSTAAKNW 176

Query: 181 AHFPHIHFGLKLDGNKQTK 199
           AH+PHI  G K+DGNKQTK
Sbjct: 181 AHYPHIRCGQKVDGNKQTK 176

[Close]

BLAST of Clc02G23830 vs. ExPASy Swiss-Prot
Match: Q9XFB0 (Putative axial regulator YABBY 2 OS=Arabidopsis thaliana OX=3702 GN=YAB2 PE=1 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.7e-49
Identity = 116/200 (58.00%), Postives = 136/200 (68.00%), Query Frame = 0


Query: 1   MSLDMMASERVCYVHCNFCNTILALKRPAKFVHFIKFRLLEEKKSVYVSVPCNSMFTLVT 60
           MS+D  +SERVCYVHC+FC TILA                       VSVP  S+FTLVT
Sbjct: 1   MSVD-FSSERVCYVHCSFCTTILA-----------------------VSVPYASLFTLVT 60

Query: 61  VRCGHCSNLLSVNMGASLQ--VVPPQDSQQGHKQQQVNAGDSSKDRASSSSSSSSSKCTK 120
           VRCGHC+NLLS+N+G SL     PP        +Q   +  + KD ASSS S+++     
Sbjct: 61  VRCGHCTNLLSLNIGVSLHQTSAPPIHQDLQPHRQHTTSLVTRKDCASSSRSTNNLS--- 120

Query: 121 IGSLDSAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKN 180
               ++ +R+  R+PPIRPPEKRQRVPSAYNRFIKEEIQRIKA NP+ISHREAFSTAAKN
Sbjct: 121 ----ENIDREAPRMPPIRPPEKRQRVPSAYNRFIKEEIQRIKACNPEISHREAFSTAAKN 169

Query: 181 WAHFPHIHFGLKLDGNKQTK 199
           WAHFPHIHFGLKLDGNK+ K
Sbjct: 181 WAHFPHIHFGLKLDGNKKGK 169

[Close]

BLAST of Clc02G23830 vs. ExPASy Swiss-Prot
Match: Q8GW46 (Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 3.2e-43
Identity = 104/198 (52.53%), Postives = 123/198 (62.12%), Query Frame = 0


Query: 1   MSLDMMASERVCYVHCNFCNTILALKRPAKFVHFIKFRLLEEKKSVYVSVPCNSMFTLVT 60
           M+  +MA+E++CY+ CNFCN ILA                       V+VPC+S+F +VT
Sbjct: 1   MANSVMATEQLCYIPCNFCNIILA-----------------------VNVPCSSLFDIVT 60

Query: 61  VRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDRASSSSSSSSSKCTKIG 120
           VRCGHC+NL SVNM A+LQ +   + Q             + + A     SSS   TKI 
Sbjct: 61  VRCGHCTNLWSVNMAAALQSLSRPNFQ-------------ATNYAVPEYGSSSRSHTKIP 120

Query: 121 SLDSAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNWA 180
           S  S      +    RPPEKRQRVPSAYN+FIKEEIQRIKA NPDISHREAFSTAAKNWA
Sbjct: 121 SRISTRTITEQRIVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWA 162

Query: 181 HFPHIHFGLKLDGNKQTK 199
           HFPHIHFGL L+ NKQ K
Sbjct: 181 HFPHIHFGLMLESNKQAK 162

[Close]

BLAST of Clc02G23830 vs. ExPASy Swiss-Prot
Match: Q10FZ7 (Protein YABBY 2 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB2 PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 3.0e-41
Identity = 99/183 (54.10%), Postives = 118/183 (64.48%), Query Frame = 0


Query: 7   ASERVCYVHCNFCNTILALKRPAKFVHFIKFRLLEEKKSVYVSVPCNSMFTLVTVRCGHC 66
           A E VCYVHCNFCNTI A                       VSVP NSM  +VTVRCGHC
Sbjct: 8   APEHVCYVHCNFCNTIFA-----------------------VSVPSNSMLNIVTVRCGHC 67

Query: 67  SNLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDRASSSSSSSSSKCTKIGSLDSAE 126
           ++LLSVN+   +Q +P +D    H Q  +   + S  R + S   SSS+  ++  + S  
Sbjct: 68  TSLLSVNLRGLVQALPAED----HLQDNLKMHNMS-FRENYSEYGSSSRYGRVPMMFSKN 127

Query: 127 RDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNWAHFPHIH 186
             +H +  +RPPEKRQRVPSAYNRFIKEEI+RIKA NPDISHREAFSTAAKNWAHFP+IH
Sbjct: 128 DTEHML-HVRPPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHFPNIH 161

Query: 187 FGL 190
           FGL
Sbjct: 188 FGL 161

[Close]

BLAST of Clc02G23830 vs. ExPASy Swiss-Prot
Match: Q2QM17 (Protein YABBY 6 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB6 PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.2e-39
Identity = 99/200 (49.50%), Postives = 118/200 (59.00%), Query Frame = 0


Query: 1   MSLDMMASERVCYVHCNFCNTILALKRPAKFVHFIKFRLLEEKKSVYVSVPCNSMFTLVT 60
           MS  +  +E+VCYVHCNFCNTILA                       VSVP NSM  +VT
Sbjct: 1   MSAQIAPAEQVCYVHCNFCNTILA-----------------------VSVPGNSMLNIVT 60

Query: 61  VRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDRA-----SSSSSSSSSK 120
           VRCGHC+NLLSVN+   +   P       H  Q+       +D++       S++SSSSK
Sbjct: 61  VRCGHCTNLLSVNLRGLMHSAPALQDHHHHHLQESGLSGCFRDQSGYPEFGFSAASSSSK 120

Query: 121 ------CTKIGSLDSAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHR 180
                    + S     +   +    RPPEKRQRVPSAYNRFIKEEI+RIKA NPDISHR
Sbjct: 121 LRLPPAAAAMVSYSQQNQQLEQALHARPPEKRQRVPSAYNRFIKEEIRRIKANNPDISHR 177

Query: 181 EAFSTAAKNWAHFPHIHFGL 190
           EAFSTAAKNWAH+P+IHFGL
Sbjct: 181 EAFSTAAKNWAHYPNIHFGL 177

[Close]

BLAST of Clc02G23830 vs. ExPASy Swiss-Prot
Match: A2X7Q3 (Protein YABBY 4 OS=Oryza sativa subsp. indica OX=39946 GN=YAB4 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.4e-35
Identity = 102/223 (45.74%), Postives = 124/223 (55.61%), Query Frame = 0


Query: 8   SERVCYVHCNFCNTILALKRPAKFVHFIKFRLLEEKKSVYVSVPCNSMFTLVTVRCGHCS 67
           +E++CYVHCN C+TILA                       V VPC+S+F  VTVRCGHC+
Sbjct: 22  TEQLCYVHCNCCDTILA-----------------------VGVPCSSLFKTVTVRCGHCA 81

Query: 68  NLLSVNM-GASLQVVPPQDSQQGH--------------------------KQQQVNAGDS 127
           NLLSVN+ G  L    P  + Q H                           +Q  +A  S
Sbjct: 82  NLLSVNLRGLLLPAPAPAPANQLHFGPSLLSPTSPHGLLDEVAFQTPSLLMEQAASASLS 141

Query: 128 SKDRASSSSSSSSSKCTKIGSLDSAERDQH--RIPPI---RPPEKRQRVPSAYNRFIKEE 187
           S    SSSS +S++   ++      +++    +  P    RPPEKRQRVPSAYNRFIK+E
Sbjct: 142 SITGRSSSSCASNAPAMQMPPAKPVQQEPELPKNAPASANRPPEKRQRVPSAYNRFIKDE 201

Query: 188 IQRIKAKNPDISHREAFSTAAKNWAHFPHIHFGLKLD-GNKQT 198
           IQRIKA NPDISHREAFS AAKNWAHFPHIHFGL  D G K+T
Sbjct: 202 IQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDQGFKKT 221

[Close]

BLAST of Clc02G23830 vs. ExPASy TrEMBL
Match: A0A0A0KGY1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G426940 PE=3 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 9.5e-83
Identity = 170/199 (85.43%), Postives = 171/199 (85.93%), Query Frame = 0


Query: 1   MSLDMMASERVCYVHCNFCNTILALKRPAKFVHFIKFRLLEEKKSVYVSVPCNSMFTLVT 60
           MSLDMMASERVCYVHCNFCNTILA                       VSVPCNSMFTLVT
Sbjct: 1   MSLDMMASERVCYVHCNFCNTILA-----------------------VSVPCNSMFTLVT 60

Query: 61  VRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDRASSSSSSSSSKCTKIG 120
           VRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDRA   SSSSS+K TKIG
Sbjct: 61  VRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDRA---SSSSSTKSTKIG 120

Query: 121 SLD-SAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNW 180
           SLD SAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNW
Sbjct: 121 SLDSSAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNW 173

Query: 181 AHFPHIHFGLKLDGNKQTK 199
           AHFPHIHFGLKLDGNKQTK
Sbjct: 181 AHFPHIHFGLKLDGNKQTK 173

[Close]

BLAST of Clc02G23830 vs. ExPASy TrEMBL
Match: A0A1S4DXR9 (putative axial regulator YABBY 2 OS=Cucumis melo OX=3656 GN=LOC103491442 PE=3 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.3e-81
Identity = 170/200 (85.00%), Postives = 171/200 (85.50%), Query Frame = 0


Query: 1   MSLDMMASERVCYVHCNFCNTILALKRPAKFVHFIKFRLLEEKKSVYVSVPCNSMFTLVT 60
           MSLDMMASERVCYVHCNFCNTILA                       VSVPCNSMFTLVT
Sbjct: 1   MSLDMMASERVCYVHCNFCNTILA-----------------------VSVPCNSMFTLVT 60

Query: 61  VRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDRASSSSSSSSSKCTKIG 120
           VRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDRA   SSSSS+K TKIG
Sbjct: 61  VRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDRA---SSSSSAKSTKIG 120

Query: 121 SLD-SAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNW 180
           SLD SAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNW
Sbjct: 121 SLDSSAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNW 174

Query: 181 AHFPHIHFGLKLDG-NKQTK 199
           AHFPHIHFGLKLDG NKQTK
Sbjct: 181 AHFPHIHFGLKLDGNNKQTK 174

[Close]

BLAST of Clc02G23830 vs. ExPASy TrEMBL
Match: A0A6J1JFK2 (putative axial regulator YABBY 2 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484576 PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 2.3e-76
Identity = 156/199 (78.39%), Postives = 167/199 (83.92%), Query Frame = 0


Query: 1   MSLDMMASERVCYVHCNFCNTILALKRPAKFVHFIKFRLLEEKKSVYVSVPCNSMFTLVT 60
           MSL+MMA+ERVCYVHCNFCNTILA                       VSVPCN+MFTLVT
Sbjct: 1   MSLEMMAAERVCYVHCNFCNTILA-----------------------VSVPCNNMFTLVT 60

Query: 61  VRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDR-ASSSSSSSSSKCTKI 120
           VRCGHCSNLLSVNMGAS+QV+PPQDSQ G+KQQQV+ GD SKDR +SSSSSSSSSKCTKI
Sbjct: 61  VRCGHCSNLLSVNMGASVQVLPPQDSQPGNKQQQVSGGDWSKDRGSSSSSSSSSSKCTKI 120

Query: 121 GSLDSAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNW 180
            SLDSAERDQHRIPPIRPPEK+QRVPSAYNRFIKEEIQRIKA NPDISHREAFSTAAKNW
Sbjct: 121 ASLDSAERDQHRIPPIRPPEKKQRVPSAYNRFIKEEIQRIKANNPDISHREAFSTAAKNW 176

Query: 181 AHFPHIHFGLKLDGNKQTK 199
           AH+PHI  G K+DGNKQTK
Sbjct: 181 AHYPHIRCGQKVDGNKQTK 176

[Close]

BLAST of Clc02G23830 vs. ExPASy TrEMBL
Match: A0A6J1FT58 (putative axial regulator YABBY 2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448539 PE=3 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 6.6e-76
Identity = 156/199 (78.39%), Postives = 165/199 (82.91%), Query Frame = 0


Query: 1   MSLDMMASERVCYVHCNFCNTILALKRPAKFVHFIKFRLLEEKKSVYVSVPCNSMFTLVT 60
           MSL+MMA ERVCYVHCNFCNTILA                       VSVPCN+MFTLVT
Sbjct: 1   MSLEMMAPERVCYVHCNFCNTILA-----------------------VSVPCNNMFTLVT 60

Query: 61  VRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDR-ASSSSSSSSSKCTKI 120
           VRCGHCSNLLSVNMGASLQV+PPQDS  G+KQQQV+ GD SKDR +SSSSSSSSSKCTKI
Sbjct: 61  VRCGHCSNLLSVNMGASLQVLPPQDSHPGNKQQQVSGGDWSKDRGSSSSSSSSSSKCTKI 120

Query: 121 GSLDSAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNW 180
            SLDSAERDQHRIPPIRPPEK+QRVPSAYNRFIKEEIQRIKA NPDISHREAFSTAAKNW
Sbjct: 121 ASLDSAERDQHRIPPIRPPEKKQRVPSAYNRFIKEEIQRIKANNPDISHREAFSTAAKNW 176

Query: 181 AHFPHIHFGLKLDGNKQTK 199
           AH+PHI  G K+DGNKQTK
Sbjct: 181 AHYPHIRCGQKVDGNKQTK 176

[Close]

BLAST of Clc02G23830 vs. ExPASy TrEMBL
Match: A0A6J1DJL5 (putative axial regulator YABBY 2 OS=Momordica charantia OX=3673 GN=LOC111020666 PE=3 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.5e-75
Identity = 160/199 (80.40%), Postives = 165/199 (82.91%), Query Frame = 0


Query: 1   MSLDMMASERVCYVHCNFCNTILALKRPAKFVHFIKFRLLEEKKSVYVSVPCNSMFTLVT 60
           MSLDMMASERVCYVHCNFCNTILA                       VSVPCNSMFTLVT
Sbjct: 1   MSLDMMASERVCYVHCNFCNTILA-----------------------VSVPCNSMFTLVT 60

Query: 61  VRCGHCSNLLSVNMGASLQVVPPQD-SQQGHKQQQVNA-GDSSKDRASSSSSSSSSKCTK 120
           VRCGHCSNLLSVNMGASLQVVPPQD SQQGHKQQQV++ GDSSK+R      SSSSKC+K
Sbjct: 61  VRCGHCSNLLSVNMGASLQVVPPQDSSQQGHKQQQVSSTGDSSKER-----GSSSSKCSK 120

Query: 121 IGSLDSAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKN 180
           I   DSAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKN
Sbjct: 121 I---DSAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKN 168

Query: 181 WAHFPHIHFGLKLDGNKQT 198
           WAHFPHIHFGLKLDGNKQ+
Sbjct: 181 WAHFPHIHFGLKLDGNKQS 168

[Close]

BLAST of Clc02G23830 vs. TAIR 10
Match: AT1G08465.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 197.2 bits (500), Expect = 1.2e-50
Identity = 116/200 (58.00%), Postives = 136/200 (68.00%), Query Frame = 0


Query: 1   MSLDMMASERVCYVHCNFCNTILALKRPAKFVHFIKFRLLEEKKSVYVSVPCNSMFTLVT 60
           MS+D  +SERVCYVHC+FC TILA                       VSVP  S+FTLVT
Sbjct: 1   MSVD-FSSERVCYVHCSFCTTILA-----------------------VSVPYASLFTLVT 60

Query: 61  VRCGHCSNLLSVNMGASLQ--VVPPQDSQQGHKQQQVNAGDSSKDRASSSSSSSSSKCTK 120
           VRCGHC+NLLS+N+G SL     PP        +Q   +  + KD ASSS S+++     
Sbjct: 61  VRCGHCTNLLSLNIGVSLHQTSAPPIHQDLQPHRQHTTSLVTRKDCASSSRSTNNLS--- 120

Query: 121 IGSLDSAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKN 180
               ++ +R+  R+PPIRPPEKRQRVPSAYNRFIKEEIQRIKA NP+ISHREAFSTAAKN
Sbjct: 121 ----ENIDREAPRMPPIRPPEKRQRVPSAYNRFIKEEIQRIKACNPEISHREAFSTAAKN 169

Query: 181 WAHFPHIHFGLKLDGNKQTK 199
           WAHFPHIHFGLKLDGNK+ K
Sbjct: 181 WAHFPHIHFGLKLDGNKKGK 169

[Close]

BLAST of Clc02G23830 vs. TAIR 10
Match: AT2G26580.1 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 176.4 bits (446), Expect = 2.3e-44
Identity = 104/198 (52.53%), Postives = 123/198 (62.12%), Query Frame = 0


Query: 1   MSLDMMASERVCYVHCNFCNTILALKRPAKFVHFIKFRLLEEKKSVYVSVPCNSMFTLVT 60
           M+  +MA+E++CY+ CNFCN ILA                       V+VPC+S+F +VT
Sbjct: 1   MANSVMATEQLCYIPCNFCNIILA-----------------------VNVPCSSLFDIVT 60

Query: 61  VRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDRASSSSSSSSSKCTKIG 120
           VRCGHC+NL SVNM A+LQ +   + Q             + + A     SSS   TKI 
Sbjct: 61  VRCGHCTNLWSVNMAAALQSLSRPNFQ-------------ATNYAVPEYGSSSRSHTKIP 120

Query: 121 SLDSAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNWA 180
           S  S      +    RPPEKRQRVPSAYN+FIKEEIQRIKA NPDISHREAFSTAAKNWA
Sbjct: 121 SRISTRTITEQRIVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWA 162

Query: 181 HFPHIHFGLKLDGNKQTK 199
           HFPHIHFGL L+ NKQ K
Sbjct: 181 HFPHIHFGLMLESNKQAK 162

[Close]

BLAST of Clc02G23830 vs. TAIR 10
Match: AT2G26580.2 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 176.4 bits (446), Expect = 2.3e-44
Identity = 104/198 (52.53%), Postives = 123/198 (62.12%), Query Frame = 0


Query: 1   MSLDMMASERVCYVHCNFCNTILALKRPAKFVHFIKFRLLEEKKSVYVSVPCNSMFTLVT 60
           M+  +MA+E++CY+ CNFCN ILA                       V+VPC+S+F +VT
Sbjct: 1   MANSVMATEQLCYIPCNFCNIILA-----------------------VNVPCSSLFDIVT 60

Query: 61  VRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDRASSSSSSSSSKCTKIG 120
           VRCGHC+NL SVNM A+LQ +   + Q             + + A     SSS   TKI 
Sbjct: 61  VRCGHCTNLWSVNMAAALQSLSRPNFQ-------------ATNYAVPEYGSSSRSHTKIP 120

Query: 121 SLDSAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKNWA 180
           S  S      +    RPPEKRQRVPSAYN+FIKEEIQRIKA NPDISHREAFSTAAKNWA
Sbjct: 121 SRISTRTITEQRIVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWA 162

Query: 181 HFPHIHFGLKLDGNKQTK 199
           HFPHIHFGL L+ NKQ K
Sbjct: 181 HFPHIHFGLMLESNKQAK 162

[Close]

BLAST of Clc02G23830 vs. TAIR 10
Match: AT4G00180.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 150.6 bits (379), Expect = 1.3e-36
Identity = 96/207 (46.38%), Postives = 116/207 (56.04%), Query Frame = 0


Query: 7   ASERVCYVHCNFCNTILALKRPAKFVHFIKFRLLEEKKSVYVSVPCNSMFTLVTVRCGHC 66
           +++++CYVHC+FC+T+LA                       VSVP +S+F  VTVRCGHC
Sbjct: 21  STDQLCYVHCSFCDTVLA-----------------------VSVPPSSLFKTVTVRCGHC 80

Query: 67  SNLLSV-------------NMGASLQVVPPQDSQQGHKQQQVNAGDSSKDRASSSSSSSS 126
           SNLLSV             N+G S    PP        ++  + G +       S  +S+
Sbjct: 81  SNLLSVTVSMRALLLPSVSNLGHSFLPPPPPPPPPNLLEEMRSGGQNINMNMMMSHHASA 140

Query: 127 S-------KCTKIG-SLDSAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKAKNPD 186
                     T+ G S+D  +      P  RPPEKRQRVPSAYNRFIKEEIQRIKA NPD
Sbjct: 141 HHPNEHLVMATRNGRSVDHLQEMPRPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPD 200

Query: 187 ISHREAFSTAAKNWAHFPHIHFGLKLD 193
           ISHREAFS AAKNWAHFPHIHFGL  D
Sbjct: 201 ISHREAFSAAAKNWAHFPHIHFGLMAD 204

[Close]

BLAST of Clc02G23830 vs. TAIR 10
Match: AT2G45190.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 147.1 bits (370), Expect = 1.5e-35
Identity = 95/200 (47.50%), Postives = 112/200 (56.00%), Query Frame = 0


Query: 8   SERVCYVHCNFCNTILALKRPAKFVHFIKFRLLEEKKSVYVSVPCNSMFTLVTVRCGHCS 67
           S+ +CYV CNFC TILA                       V+VP  S+F  VTVRCG C+
Sbjct: 22  SDHLCYVQCNFCQTILA-----------------------VNVPYTSLFKTVTVRCGCCT 81

Query: 68  NLLSVNMGASLQVVPPQDSQQGHKQQQVNAGDSSKDRASSSSSSSSSKCTKIGSLDSAE- 127
           NLLSVNM + +     Q   Q       N  D  ++   + S+ +     +  +++    
Sbjct: 82  NLLSVNMRSYVLPASNQLQLQLGPHSYFNPQDILEELRDAPSNMNMMMMNQHPTMNDIPS 141

Query: 128 ----RDQHRI---PPI-RPPEKRQRVPSAYNRFIKEEIQRIKAKNPDISHREAFSTAAKN 187
                 QH I   PP+ RPPEKRQRVPSAYNRFIKEEIQRIKA NPDISHREAFS AAKN
Sbjct: 142 FMDLHQQHEIPKAPPVNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKN 198

Query: 188 WAHFPHIHFGLKLDGNKQTK 199
           WAHFPHIHFGL  D     K
Sbjct: 202 WAHFPHIHFGLVPDNQPVKK 198

The following BLAST results are available for this feature:

BLAST of Clc02G23830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902333.1	2.5e-85	86.87	putative axial regulator YABBY 2 isoform X3 [Benincasa hispida]	[more]
XP_004140176.1	2.0e-82	85.43	putative axial regulator YABBY 2 [Cucumis sativus] >XP_011657596.1 putative axia...	[more]
XP_008449608.1	4.8e-81	85.00	PREDICTED: putative axial regulator YABBY 2 [Cucumis melo] >XP_016900784.1 PREDI...	[more]
XP_022986990.1	4.7e-76	78.39	putative axial regulator YABBY 2 isoform X2 [Cucurbita maxima]	[more]
XP_023512204.1	1.0e-75	78.39	putative axial regulator YABBY 2 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc02G23830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XFB0	1.7e-49	58.00	Putative axial regulator YABBY 2 OS=Arabidopsis thaliana OX=3702 GN=YAB2 PE=1 SV...	[more]
Q8GW46	3.2e-43	52.53	Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1	[more]
Q10FZ7	3.0e-41	54.10	Protein YABBY 2 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB2 PE=2 SV=1	[more]
Q2QM17	1.2e-39	49.50	Protein YABBY 6 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB6 PE=2 SV=1	[more]
A2X7Q3	1.4e-35	45.74	Protein YABBY 4 OS=Oryza sativa subsp. indica OX=39946 GN=YAB4 PE=3 SV=1	[more]

BLAST of Clc02G23830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGY1	9.5e-83	85.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G426940 PE=3 SV=1	[more]
A0A1S4DXR9	2.3e-81	85.00	putative axial regulator YABBY 2 OS=Cucumis melo OX=3656 GN=LOC103491442 PE=3 SV...	[more]
A0A6J1JFK2	2.3e-76	78.39	putative axial regulator YABBY 2 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1FT58	6.6e-76	78.39	putative axial regulator YABBY 2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1DJL5	2.5e-75	80.40	putative axial regulator YABBY 2 OS=Momordica charantia OX=3673 GN=LOC111020666 ...	[more]

BLAST of Clc02G23830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08465.1	1.2e-50	58.00	Plant-specific transcription factor YABBY family protein	[more]
AT2G26580.1	2.3e-44	52.53	plant-specific transcription factor YABBY family protein	[more]
AT2G26580.2	2.3e-44	52.53	plant-specific transcription factor YABBY family protein	[more]
AT4G00180.1	1.3e-36	46.38	Plant-specific transcription factor YABBY family protein	[more]
AT2G45190.1	1.5e-35	47.50	Plant-specific transcription factor YABBY family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006780	YABBY protein	PFAM	PF04690	YABBY	coord: 7..31 e-value: 7.1E-7 score: 30.0 coord: 47..189 e-value: 8.7E-62 score: 208.6
IPR006780	YABBY protein	PANTHER	PTHR31675	PROTEIN YABBY 6-RELATED	coord: 6..30 coord: 45..198
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 134..185 e-value: 4.8E-7 score: 32.0
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 134..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..120
None	No IPR available	PANTHER	PTHR31675:SF30	AXIAL REGULATOR YABBY 2-RELATED	coord: 6..30 coord: 45..198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G23830.2	Clc02G23830.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010158	abaxial cell fate specification
biological_process	GO:0007275	multicellular organism development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000976	transcription cis-regulatory region binding