Clc02G19710 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G19710
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	DEAD-box ATP-dependent RNA helicase 36
Location	ClcChr02: 32344278 .. 32348326 (-)
RNA-Seq Expression	Clc02G19710
Synteny	Clc02G19710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTACCGTTGCCCTTCACCAATTCTCTCGTCGTCGTTGCCTTTAGCTCACTTTTGAGTATTCATCGACTGACTTTGCCCTAATTTAACGGTTCAGTTTGCTCGGCGCCAAGCCTTCAATTGCCACTGAATCCATCAATTTTTGCTGCCATTTTTCAAACCTTCAAACCCCTTGAATTGTTTTTCCCTCACCTCTGATTCCATGGATCAAGAAGTATTAGTCGACGAGAGTTTCCCGCTTTTCTCAAAATCCCACCGAAAGAAGCATAAACCTTCCGGAAACCCCAACGCTGCTCCTGTTTCCACCGCCGTCGAGAACATTGCTCCGAAGAAGTCTCTTCAGATTGAGAAATCCACAGAACTTAGCACCAAATCCACCAACAATGTTACATTTGCCGACCTCGGCTTGTCGGAATGGATCGTCCAGACTTGCAAAGAATTGGTTATGAAGAAGCCCACGGCGGTTCAAACCCACTGCATCCCTAAGATTCTTGCTGGCCTCGACGTACTTGGTATTGCCCAAACTGGGAGTGGGAAGACTGCTGCCTTTGCGTTGCCGATTCTTCAACGGCTTTCCGAGACCCCTTTTGGTGTCTTCGCGTTGGTGGTCACTCCCACTAGGGAATTGGCCTATCAATTGGCTGAGCAGTTCAGGGCACTCGGTTCCTGCTTGAATTTGCGGTGCTCTGTGGTTGTTGGAGGTATGGATATGTTGAACCAGACGCAGAGTTTGTTGAAGAGGCCTCATATAGTAATTGCAACGCCGGGAAGGGTTAAAGTATTGCTGGAGAACCCTGATATCCCTGTCGTCTTTTCCAAAACTAAGGTTTGTAATATTCGTACCTTGTTCCTTTCTATTATAGAAGTGGTACTACCTAATTTGAATTTGATTAGTATCGAGGGGTCAGATGATTAATGGGTTTTGGTTGATGCATAGAAATGCCATAATCATTTTTTAATTTATTTTGAAGTGAAACAATGAAAGGAAAGAAAAAATCATCCAAGTTCTAACATGGGAGTCATGGGACTAATGGCAAATGGCTGAGGACTTGTCAGTTCATGTGTCGAGATTCTGAGTTTTCTCAATTTTGTTCTCTTGCACCAAAGATATACTGTTGGTGGTAGCCAAGATGAAAGGAAGTGATTTCTCGCCATGGTTAATTGACATTTTTCCAAATCACTCCAAGATATATTTTTAATCATTCAAAATCAATTATATACGTATATACGTATGAAATTTGCATTTAAAAGTGTAAAATAAAATATTAAATTAATTTTGTGTAATCAAAGACCTATTTTGGAGTGATTTTAAATATGACAAAAGTGATTTTAACAATTTCAAAATCACCCCAACACTATTTATATTTTCCTTTAAGAAAAAAAGGACCACATAACAATACAAAGGAAGCTTCTTTTTCTCATGTGTGAAGAAGCTATTCGTTGTTTCATAGTTGCTTGTCTTGTTTTTATTGTTCTGCTGCCAAACAGCTCATGTTTGTGACTTTTTAATTATCTTTTTATACTTTCAGTTCCTAGTTCTGGATGAAGCTGATAGAGTATTGGATGTTGGCTTTGAAGAAGAATTGAAAGTAATCTTCCAATGCTTGCCACGCAACCGTCAAACTCTATTATTCTCTGCAACAATGACGAAGGATCTGGAAACACTGCTCGAGCTTTCTGCAAACAAGGCGTACTTTTACGAGGCTTATGAAGGCTTCAAGACAGTTGATATGCTCAAGCAGCAATATGTATTTATTCCAAAGGACGTGAAGGATCTGTATCTACTACATATTTTGTCTAAAATGGAAGACATGGGTATTCGATCAGCAATCATATTTGTCCAAACTTGCAAGTACGGTTTTTTTTTGGCCTTCACCTCTCTTATTCTTCATTATATCAATGTGGCTTGTTTCCCTTTCAAAAAAACCTCTCTTATTCTCTCTCTATCTCTCTCACACAGTGTGCATAAGCGCATTGACAAAGGTCTTAACTTTCACATCCAATTGACTTAGCATTGTAAATTCTTTAATTCATTGATTTCTTTAACTGCTCTACCTAAAGTTGGTGTTTGCTTTTTCTTTCTACTGTATGCAGAAGTTGTCACCTGTTAGGGTTGTTGCTTGAAGCACTCGATCAGGAGGTGGCAGCATTGCATTCATTTAAGTCACAGTCTGAGAGGCTTGCCGCACTCTACCGTTTCAAATCAGGACAAGTTCCTGTATTGCTTGCAACTGATGTTGCTAGTCGAGGTTTGGATATTCCAACAGTTGATCTTGTTATCAACTACGATATTCCAAGGTGGGCTTTTAAATTGATTTCTTCTGCTTACATTAGAAGTGTTCTCAGAATGCTTGTGACATAAATATAGTAGCACTTTAATTCAGGTTTCCAAGAGATTATGTTCATCGAGTGGGACGTACTGCACGTGCAGGCAGAGGAGGATTGGCTGTGAGCTTTATTACCCAGGTGTGTGTTACTATTGTGGTGGATAACTGTAACACTTTAATTCGACACGTTTCTTGGAGATGAGCTCCACATCATCAAATGTACAAAAGTTTCTTTAAAAAGTTGTTTTTCACTTATAGCGAACGGTGACTTTGTATGAGTAAGCTGTGCATTATACTTGTAATATTTTGTAGTAGTTTTTTCTATTTCTTCCATATGAAACATTCTTCCTATTTTCCGTGGGTTATTTTTATATTTATTTTTAAAAAAGCGTGGGTAATGTTTTTTAAGTACAATCCATGTGATGTATGAGGGCTGAACCTCTGACGTCAAGAGTGCATGCAAATTACCGTTGAGCTACGCTTATTTAGATCGGCAAATGTGTGTAATGTTAAAGTGGATTTGTAATCAAGTTTATATTATTATGCTTCTCTTGTGATTGCAAAATCTACAATGGTATATTGGTGCAGGAAAGTTGTAAGTTGCTCATGTTTTTGTTTTCATCTCTTCAAGCAAATGTTTTCCTGAGATTTAATTTGTTTTTCTTACCCATAAACATCAATTCGGTTTGCAGAATGATGTGCAGCTTATTCATGAAATAGAGGCCAATCTTGGAAAGCAATTGGAGATTTTTGAGTGCAAGGAGAATGAAGTGCTTGAGAATATTACCAAGGTAAATTTTGGATGCTTTGGCTTTTTCTCCCCCTCCAATTCCAAACAGAACTTTGAATGTGTAATGAATTTGTCAGTGTATTTTATACTGTTATTGAACTTCATGAATCATCTCGTCAGTATCGATAATTTCTAAACGCAGACTTCTTACCTTTAAAATTGGAAAAAGCACACAGACTTCATTTCTCCCTTATCACTAGCTGAATTTATGCCGGAGAGAAAACGAGTTTCCTGCGCTCTAATTCGCACCATGGAGTTCCTTTTATTAACTGGATTGTTATCTTGTAACTCTTCTGACATCTGTTTGTTGAGGGATGGCTGCATCATGTCAGCAATGGTTGTTCGGATCTAATTGTCATATTCTGATAAGCCTAGAAACTTGTTTCCGTCTCCTATAGTTGTATCAGTCAATTTTACGGCTCAACGGACGTGCTTGAGCATCTCAATCATTCTACTTCATAACATTCGAATGATGATTAGACGATTTTTGCATTTCTTGTCAGTATATTAAGAGCGAATTGAGTTTAATTCAGCTTGCAACGTTTGTATGCAGGTTTACAAGGCTAGACATGTGGCAAAAATGAAGATGGTGGATGATGGATTTGAGGAGAAAGTAAAAGAACGAAAGAAACAGAAATTAAAAACATTGGCAGAGAAAGGATTGATGAAGAAAAGGAACAAAAGGAGAAGAAAAGAAAAAACTTCCCAAATAATTGGCAGTTAAGTTGTATGAGAATCTCAACTACCATCATCAAAATTTTGATATTGCTTAATTTTAATACATGTGTAATTATTTTTCCGGCGCCTGTCTTTTGGCTCTTGCTCTAGAAAAATCCATACGAAAAAGAAAAAAATAGTGGTAGAGTAGGTCATAAGTTTTGGTTTGTATTTTTTATTTTATTTAGGTTTAAATATTACTATTTTTAGTTTTAGT

mRNA sequence

CCTACCGTTGCCCTTCACCAATTCTCTCGTCGTCGTTGCCTTTAGCTCACTTTTGAGTATTCATCGACTGACTTTGCCCTAATTTAACGGTTCAGTTTGCTCGGCGCCAAGCCTTCAATTGCCACTGAATCCATCAATTTTTGCTGCCATTTTTCAAACCTTCAAACCCCTTGAATTGTTTTTCCCTCACCTCTGATTCCATGGATCAAGAAGTATTAGTCGACGAGAGTTTCCCGCTTTTCTCAAAATCCCACCGAAAGAAGCATAAACCTTCCGGAAACCCCAACGCTGCTCCTGTTTCCACCGCCGTCGAGAACATTGCTCCGAAGAAGTCTCTTCAGATTGAGAAATCCACAGAACTTAGCACCAAATCCACCAACAATGTTACATTTGCCGACCTCGGCTTGTCGGAATGGATCGTCCAGACTTGCAAAGAATTGGTTATGAAGAAGCCCACGGCGGTTCAAACCCACTGCATCCCTAAGATTCTTGCTGGCCTCGACGTACTTGGTATTGCCCAAACTGGGAGTGGGAAGACTGCTGCCTTTGCGTTGCCGATTCTTCAACGGCTTTCCGAGACCCCTTTTGGTGTCTTCGCGTTGGTGGTCACTCCCACTAGGGAATTGGCCTATCAATTGGCTGAGCAGTTCAGGGCACTCGGTTCCTGCTTGAATTTGCGGTGCTCTGTGGTTGTTGGAGGTATGGATATGTTGAACCAGACGCAGAGTTTGTTGAAGAGGCCTCATATAGTAATTGCAACGCCGGGAAGGGTTAAAGTATTGCTGGAGAACCCTGATATCCCTGTCGTCTTTTCCAAAACTAAGTTCCTAGTTCTGGATGAAGCTGATAGAGTATTGGATGTTGGCTTTGAAGAAGAATTGAAAGTAATCTTCCAATGCTTGCCACGCAACCGTCAAACTCTATTATTCTCTGCAACAATGACGAAGGATCTGGAAACACTGCTCGAGCTTTCTGCAAACAAGGCGTACTTTTACGAGGCTTATGAAGGCTTCAAGACAGTTGATATGCTCAAGCAGCAATATGTATTTATTCCAAAGGACGTGAAGGATCTGTATCTACTACATATTTTGTCTAAAATGGAAGACATGGGTATTCGATCAGCAATCATATTTGTCCAAACTTGCAAAAGTTGTCACCTGTTAGGGTTGTTGCTTGAAGCACTCGATCAGGAGGTGGCAGCATTGCATTCATTTAAGTCACAGTCTGAGAGGCTTGCCGCACTCTACCGTTTCAAATCAGGACAAGTTCCTGTATTGCTTGCAACTGATGTTGCTAGTCGAGGTTTGGATATTCCAACAGTTGATCTTGTTATCAACTACGATATTCCAAGGTTTCCAAGAGATTATGTTCATCGAGTGGGACGTACTGCACGTGCAGGCAGAGGAGGATTGGCTGTGAGCTTTATTACCCAGCGAACGGTGACTTTGTATGATGCATGCAAATTACCGTTGAGCTACGCTTATTTAGATCGGCAAATGTGTAATGATGTGCAGCTTATTCATGAAATAGAGGCCAATCTTGGAAAGCAATTGGAGATTTTTGAGTGCAAGGAGAATGAAGTGCTTGAGAATATTACCAAGGTTTACAAGGCTAGACATGTGGCAAAAATGAAGATGGTGGATGATGGATTTGAGGAGAAAGTAAAAGAACGAAAGAAACAGAAATTAAAAACATTGGCAGAGAAAGGATTGATGAAGAAAAGGAACAAAAGGAGAAGAAAAGAAAAAACTTCCCAAATAATTGGCAGTTAAGTTGTATGAGAATCTCAACTACCATCATCAAAATTTTGATATTGCTTAATTTTAATACATGTGTAATTATTTTTCCGGCGCCTGTCTTTTGGCTCTTGCTCTAGAAAAATCCATACGAAAAAGAAAAAAATAGTGGTAGAGTAGGTCATAAGTTTTGGTTTGTATTTTTTATTTTATTTAGGTTTAAATATTACTATTTTTAGTTTTAGT

Coding sequence (CDS)

ATGGATCAAGAAGTATTAGTCGACGAGAGTTTCCCGCTTTTCTCAAAATCCCACCGAAAGAAGCATAAACCTTCCGGAAACCCCAACGCTGCTCCTGTTTCCACCGCCGTCGAGAACATTGCTCCGAAGAAGTCTCTTCAGATTGAGAAATCCACAGAACTTAGCACCAAATCCACCAACAATGTTACATTTGCCGACCTCGGCTTGTCGGAATGGATCGTCCAGACTTGCAAAGAATTGGTTATGAAGAAGCCCACGGCGGTTCAAACCCACTGCATCCCTAAGATTCTTGCTGGCCTCGACGTACTTGGTATTGCCCAAACTGGGAGTGGGAAGACTGCTGCCTTTGCGTTGCCGATTCTTCAACGGCTTTCCGAGACCCCTTTTGGTGTCTTCGCGTTGGTGGTCACTCCCACTAGGGAATTGGCCTATCAATTGGCTGAGCAGTTCAGGGCACTCGGTTCCTGCTTGAATTTGCGGTGCTCTGTGGTTGTTGGAGGTATGGATATGTTGAACCAGACGCAGAGTTTGTTGAAGAGGCCTCATATAGTAATTGCAACGCCGGGAAGGGTTAAAGTATTGCTGGAGAACCCTGATATCCCTGTCGTCTTTTCCAAAACTAAGTTCCTAGTTCTGGATGAAGCTGATAGAGTATTGGATGTTGGCTTTGAAGAAGAATTGAAAGTAATCTTCCAATGCTTGCCACGCAACCGTCAAACTCTATTATTCTCTGCAACAATGACGAAGGATCTGGAAACACTGCTCGAGCTTTCTGCAAACAAGGCGTACTTTTACGAGGCTTATGAAGGCTTCAAGACAGTTGATATGCTCAAGCAGCAATATGTATTTATTCCAAAGGACGTGAAGGATCTGTATCTACTACATATTTTGTCTAAAATGGAAGACATGGGTATTCGATCAGCAATCATATTTGTCCAAACTTGCAAAAGTTGTCACCTGTTAGGGTTGTTGCTTGAAGCACTCGATCAGGAGGTGGCAGCATTGCATTCATTTAAGTCACAGTCTGAGAGGCTTGCCGCACTCTACCGTTTCAAATCAGGACAAGTTCCTGTATTGCTTGCAACTGATGTTGCTAGTCGAGGTTTGGATATTCCAACAGTTGATCTTGTTATCAACTACGATATTCCAAGGTTTCCAAGAGATTATGTTCATCGAGTGGGACGTACTGCACGTGCAGGCAGAGGAGGATTGGCTGTGAGCTTTATTACCCAGCGAACGGTGACTTTGTATGATGCATGCAAATTACCGTTGAGCTACGCTTATTTAGATCGGCAAATGTGTAATGATGTGCAGCTTATTCATGAAATAGAGGCCAATCTTGGAAAGCAATTGGAGATTTTTGAGTGCAAGGAGAATGAAGTGCTTGAGAATATTACCAAGGTTTACAAGGCTAGACATGTGGCAAAAATGAAGATGGTGGATGATGGATTTGAGGAGAAAGTAAAAGAACGAAAGAAACAGAAATTAAAAACATTGGCAGAGAAAGGATTGATGAAGAAAAGGAACAAAAGGAGAAGAAAAGAAAAAACTTCCCAAATAATTGGCAGTTAA

Protein sequence

MDQEVLVDESFPLFSKSHRKKHKPSGNPNAAPVSTAVENIAPKKSLQIEKSTELSTKSTNNVTFADLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKRPHIVIATPGRVKVLLENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSKMEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVLLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQRTVTLYDACKLPLSYAYLDRQMCNDVQLIHEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKMVDDGFEEKVKERKKQKLKTLAEKGLMKKRNKRRRKEKTSQIIGS

Homology

[Close]

BLAST of Clc02G19710 vs. NCBI nr
Match: XP_038900331.1 (DEAD-box ATP-dependent RNA helicase 36 [Benincasa hispida])

HSP 1 Score: 902.1 bits (2330), Expect = 2.2e-258
Identity = 478/520 (91.92%), Postives = 489/520 (94.04%), Query Frame = 0


Query: 1   MDQEVLVDESFPLFSKSHRKKHKPSGNPNAAPVSTAVENIAPKKSLQIEKSTELSTKSTN 60
           MD+EV++DE+FPLFSKSHRKKHKPS NP  AP+S AVEN APKKSLQIEKSTELSTKSTN
Sbjct: 1   MDREVIIDENFPLFSKSHRKKHKPSENPTGAPISPAVENNAPKKSLQIEKSTELSTKSTN 60

Query: 61  NVTFADLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI 120
           NVTFADLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI
Sbjct: 61  NVTFADLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI 120

Query: 121 LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKR 180
           LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDML+QTQSLLKR
Sbjct: 121 LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLSQTQSLLKR 180

Query: 181 PHIVIATPGRVKVLL-ENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ 240
           PHIVIATPGRVKVLL ENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLP +RQ
Sbjct: 181 PHIVIATPGRVKVLLEENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPHSRQ 240

Query: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSK 300
           TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSK
Sbjct: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSK 300

Query: 301 MEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVL 360
           MEDMGIRSAIIFVQTCKSCH+LGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVL
Sbjct: 301 MEDMGIRSAIIFVQTCKSCHMLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVL 360

Query: 361 LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQRTVTLYDA 420
           LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQ        
Sbjct: 361 LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQ-------- 420

Query: 421 CKLPLSYAYLDRQMCNDVQLIHEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKM 480
                          NDVQLIHEIEANLGKQLE FECKENEVLENITKVYKARHVAKMKM
Sbjct: 421 ---------------NDVQLIHEIEANLGKQLENFECKENEVLENITKVYKARHVAKMKM 480

Query: 481 VDDGFEEKVKERKKQKLKTLAEKGLMKKRNKRRRKEKTSQ 520
           VDDGFEEKVKERKKQKLKTLAEKGL+KKRNKR+RKEKTS+
Sbjct: 481 VDDGFEEKVKERKKQKLKTLAEKGLLKKRNKRKRKEKTSK 497

[Close]

BLAST of Clc02G19710 vs. NCBI nr
Match: XP_008456302.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 36 [Cucumis melo] >KAA0054684.1 DEAD-box ATP-dependent RNA helicase 36 [Cucumis melo var. makuwa] >TYK08588.1 DEAD-box ATP-dependent RNA helicase 36 [Cucumis melo var. makuwa])

HSP 1 Score: 892.1 bits (2304), Expect = 2.3e-255
Identity = 477/518 (92.08%), Postives = 483/518 (93.24%), Query Frame = 0


Query: 1   MDQEVLVDESFPLFSKSHRKKHKPSGNPNAAPVSTAVENIAPKKSLQIEKSTELSTKSTN 60
           MDQEV+VD +FPLFSK HRKKHKPS NP A     AVENIAPK SLQIEKSTEL+TKSTN
Sbjct: 1   MDQEVIVDANFPLFSKPHRKKHKPSENPTA-----AVENIAPKSSLQIEKSTELTTKSTN 60

Query: 61  NVTFADLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI 120
           NVTF+DLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI
Sbjct: 61  NVTFSDLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI 120

Query: 121 LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKR 180
           LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDML+QTQSLLKR
Sbjct: 121 LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLSQTQSLLKR 180

Query: 181 PHIVIATPGRVKVLL-ENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ 240
           PHIVIATPGRVKVLL ENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ
Sbjct: 181 PHIVIATPGRVKVLLEENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ 240

Query: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSK 300
           TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSK
Sbjct: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSK 300

Query: 301 MEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVL 360
           MEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVL
Sbjct: 301 MEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVL 360

Query: 361 LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQRTVTLYDA 420
           LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQ        
Sbjct: 361 LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQ-------- 420

Query: 421 CKLPLSYAYLDRQMCNDVQLIHEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKM 480
                          NDV LIHEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKM
Sbjct: 421 ---------------NDVHLIHEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKM 480

Query: 481 VDDGFEEKVKERKKQKLKTLAEKGLMKKRNKRRRKEKT 518
           VDDGFEEKVKERKKQKLKTLAEKGL+KKRNKRRRKEKT
Sbjct: 481 VDDGFEEKVKERKKQKLKTLAEKGLLKKRNKRRRKEKT 490

[Close]

BLAST of Clc02G19710 vs. NCBI nr
Match: XP_004139902.1 (DEAD-box ATP-dependent RNA helicase 36 [Cucumis sativus] >KGN46799.1 hypothetical protein Csa_020949 [Cucumis sativus])

HSP 1 Score: 881.7 bits (2277), Expect = 3.1e-252
Identity = 469/520 (90.19%), Postives = 481/520 (92.50%), Query Frame = 0


Query: 1   MDQEVLVDESFPLFSKSHRKKHKPSGNPNAAPVSTAVENIAPKKSLQIEKSTELSTKSTN 60
           MDQEV+VD +FPLFSK HRKKHKPS NP      TAV N+APKKSLQIEKSTEL+TKSTN
Sbjct: 1   MDQEVIVDRNFPLFSKPHRKKHKPSENP------TAVPNVAPKKSLQIEKSTELTTKSTN 60

Query: 61  NVTFADLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI 120
           N+TFADLGLSEWI+QTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI
Sbjct: 61  NITFADLGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI 120

Query: 121 LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKR 180
           LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKR
Sbjct: 121 LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKR 180

Query: 181 PHIVIATPGRVKVLLE-NPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ 240
           PHIVIATPGR+KVLLE NPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ
Sbjct: 181 PHIVIATPGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ 240

Query: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSK 300
           TLLFSATMTKDLETL +LSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLH+LSK
Sbjct: 241 TLLFSATMTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLSK 300

Query: 301 MEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVL 360
           MEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHS KSQSERLAALYRFKSG+VPVL
Sbjct: 301 MEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGRVPVL 360

Query: 361 LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQRTVTLYDA 420
           LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQ        
Sbjct: 361 LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQ-------- 420

Query: 421 CKLPLSYAYLDRQMCNDVQLIHEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKM 480
                          NDV LIHEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKM
Sbjct: 421 ---------------NDVHLIHEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKM 480

Query: 481 VDDGFEEKVKERKKQKLKTLAEKGLMKKRNKRRRKEKTSQ 520
           VD GFEEKVKERKKQK KTLAEKGL+KKRNKRRRKEKTS+
Sbjct: 481 VDGGFEEKVKERKKQKRKTLAEKGLLKKRNKRRRKEKTSE 491

[Close]

BLAST of Clc02G19710 vs. NCBI nr
Match: XP_022149766.1 (DEAD-box ATP-dependent RNA helicase 36 [Momordica charantia])

HSP 1 Score: 849.4 bits (2193), Expect = 1.7e-242
Identity = 451/521 (86.56%), Postives = 476/521 (91.36%), Query Frame = 0


Query: 1   MDQEVLVDESFPLFSKSHRKKHKPSGNPNAAPVSTAVENIAPKKSLQIEKSTELSTKSTN 60
           MD+EV VDE+FPLF+KSHRKKHKPS NP   PVST VE IA KK LQ+EKST+L+T STN
Sbjct: 1   MDEEVTVDENFPLFAKSHRKKHKPSQNPTGGPVSTIVETIASKKPLQVEKSTDLATTSTN 60

Query: 61  NVTFADLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI 120
           NVTFADLGLSEWIV+TCKEL M+KPTAVQTHCIPKILAGLDVLG+AQTGSGKTAAFALPI
Sbjct: 61  NVTFADLGLSEWIVRTCKELAMRKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI 120

Query: 121 LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKR 180
           LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGS L+LRCSVVVGGMDMLNQ QSLLKR
Sbjct: 121 LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLHLRCSVVVGGMDMLNQAQSLLKR 180

Query: 181 PHIVIATPGRVKVLL-ENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ 240
           PHIVIATPGRVKVLL ENPDIP+VFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ
Sbjct: 181 PHIVIATPGRVKVLLEENPDIPLVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ 240

Query: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSK 300
           TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTV+MLKQQYVFIPK+VKD+YLLHILSK
Sbjct: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVEMLKQQYVFIPKNVKDVYLLHILSK 300

Query: 301 MEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVL 360
           MEDMGIRSAIIFVQTC+SCHLLGLLLE LDQEVAALHSFKSQS+RLAALYRFKSGQVPVL
Sbjct: 301 MEDMGIRSAIIFVQTCRSCHLLGLLLEELDQEVAALHSFKSQSQRLAALYRFKSGQVPVL 360

Query: 361 LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQRTVTLYDA 420
           LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQ        
Sbjct: 361 LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQ-------- 420

Query: 421 CKLPLSYAYLDRQMCNDVQLIHEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKM 480
                          NDV+LIHEIEA +GKQLE FECKENEVLENITKVYKAR VA MKM
Sbjct: 421 ---------------NDVELIHEIEAVVGKQLENFECKENEVLENITKVYKARRVAAMKM 480

Query: 481 VDDGFEEKVKERKKQKLKTLAEKGLMKKRNK-RRRKEKTSQ 520
           VDDGFEEKVKERKKQK KTLAEKGL+KK+ + ++R+EKTS+
Sbjct: 481 VDDGFEEKVKERKKQKQKTLAEKGLLKKKKRSKKRREKTSE 498

[Close]

BLAST of Clc02G19710 vs. NCBI nr
Match: KAG6605347.1 (DEAD-box ATP-dependent RNA helicase 36, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035305.1 DEAD-box ATP-dependent RNA helicase 36 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 846.7 bits (2186), Expect = 1.1e-241
Identity = 452/525 (86.10%), Postives = 477/525 (90.86%), Query Frame = 0


Query: 1   MDQEVLVDESFPLFSKSHRKKHKPS-GNPNAAPVSTAVENIAPKKSLQIEKSTELSTKST 60
           MDQEV VDE+FPLFSKSHRK HKPS  NP AA VST+V+N A K  +QIEKSTEL+TKST
Sbjct: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSTSVDNTAEKAPIQIEKSTELTTKST 60

Query: 61  NNVTFADLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALP 120
            NVTFADLGLSEWIVQTCKEL MKKPTAVQTHCIPKILAGLDVLG+AQTGSGKTAAFALP
Sbjct: 61  -NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALP 120

Query: 121 ILQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLK 180
           ILQ+LSETPFGVFALVVTPTRELAYQLAEQFRALGS LNLRCSVVVGGMDMLNQTQSLLK
Sbjct: 121 ILQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLK 180

Query: 181 RPHIVIATPGRVKVLL-ENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNR 240
           RPHIVIATPGRVKVLL ENPDIP VFSKTKFLVLDEADRVLDVGFEEELKVIF+CLPRNR
Sbjct: 181 RPHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNR 240

Query: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILS 300
           QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPK+VKD+YLLHI+S
Sbjct: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMS 300

Query: 301 KMEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPV 360
           KM+DMG+RSAIIFV TCKSCH LGLLLE LDQ+VAALHSFKSQSERLAALYRFKSGQ PV
Sbjct: 301 KMKDMGVRSAIIFVHTCKSCHHLGLLLEELDQDVAALHSFKSQSERLAALYRFKSGQAPV 360

Query: 361 LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQRTVTLYD 420
           LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGR GLAVSFITQ       
Sbjct: 361 LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRHGLAVSFITQ------- 420

Query: 421 ACKLPLSYAYLDRQMCNDVQLIHEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMK 480
                           NDV+LIHEIEANLGK+LEIFECKENEVLEN+TKVYKAR VA MK
Sbjct: 421 ----------------NDVELIHEIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMK 480

Query: 481 MVDDGFEEKVKERKKQKLKTLAEKGLMKKRNKRRRKEKTSQIIGS 524
           MVDDGFEEKVKERKKQK KTLAEKGL+KKR+++RR+EK S+ +G+
Sbjct: 481 MVDDGFEEKVKERKKQKFKTLAEKGLLKKRSRKRRREKASKELGA 501

[Close]

BLAST of Clc02G19710 vs. ExPASy Swiss-Prot
Match: Q9SA27 (DEAD-box ATP-dependent RNA helicase 36 OS=Arabidopsis thaliana OX=3702 GN=RH36 PE=2 SV=1)

HSP 1 Score: 603.6 bits (1555), Expect = 2.1e-171
Identity = 320/470 (68.09%), Postives = 379/470 (80.64%), Query Frame = 0


Query: 47  QIEKST--ELSTKSTNNVTFADLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLG 106
           Q EK T    S+ +T+   F  LGL+EW V+TCKEL M+KPT VQTHC+PKILAG DVLG
Sbjct: 41  QFEKFTNPNPSSDTTSATNFEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLG 100

Query: 107 IAQTGSGKTAAFALPILQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVV 166
           +AQTGSGKTAAFALPIL RL+E P+GVFALVVTPTRELA+QLAEQF+ALGSCLNLRCSV+
Sbjct: 101 LAQTGSGKTAAFALPILHRLAEDPYGVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVI 160

Query: 167 VGGMDMLNQTQSLLKRPHIVIATPGRVKVLLE-NPDIPVVFSKTKFLVLDEADRVLDVGF 226
           VGGMDML QT SL+ RPHIVI TPGR+KVLLE NPD+P VFS+TKFLVLDEADRVLDVGF
Sbjct: 161 VGGMDMLTQTMSLVSRPHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGF 220

Query: 227 EEELKVIFQCLPRNRQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVF 286
           ++EL+ IFQCLP++RQTLLFSATMT +L+ LLE S+NKAYFYEAYEG KTVD L QQ++F
Sbjct: 221 QDELRTIFQCLPKSRQTLLFSATMTSNLQALLEHSSNKAYFYEAYEGLKTVDTLTQQFIF 280

Query: 287 IPKDVKDLYLLHILSKMEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSE 346
             KD K+LYL+HILS+MED GIRSA+IFV TC++C  L L+L+ L+ E  A+HS  SQS 
Sbjct: 281 EDKDAKELYLVHILSQMEDKGIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSM 340

Query: 347 RLAALYRFKSGQVPVLLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGG 406
           RL+AL +FKSG+VP+LLATDVASRGLDIPTVDLVINYDIPR PRDYVHRVGRTARAGRGG
Sbjct: 341 RLSALSKFKSGKVPILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGG 400

Query: 407 LAVSFITQRTVTLYDACKLPLSYAYLDRQMCNDVQLIHEIEANLGKQLEIFECKENEVLE 466
           LAVS IT+                        DV+LIH+IE  +GK++E +  K      
Sbjct: 401 LAVSIITE-----------------------TDVKLIHKIEEEVGKKMEPYNKKVITDSL 460

Query: 467 NITKVYKARHVAKMKMVDDGFEEKVKERKKQKLKTLAEKGLMKKRNKRRR 514
            +TKV KA+ VA MKM+D+GFE+KVK+R+K K KTLA+KGL+KKR KR++
Sbjct: 461 EVTKVSKAKRVAMMKMLDNGFEDKVKDRRKLKRKTLADKGLLKKRGKRQK 487

[Close]

BLAST of Clc02G19710 vs. ExPASy Swiss-Prot
Match: Q8L4E9 (DEAD-box ATP-dependent RNA helicase 36 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0633500 PE=3 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 8.7e-141
Identity = 280/523 (53.54%), Postives = 357/523 (68.26%), Query Frame = 0


Query: 11  FPLFSKSHRKKHKPSGN------------PNAAPVSTAVE------NIAPKKSLQIEKST 70
           F LFSK    K KP               PN +P S A+E      + AP  ++      
Sbjct: 10  FLLFSKPKSSKKKPKQEAEPQVHTQPEEPPNPSP-SPAIEPDLRDSDEAPAAAVTEHAGD 69

Query: 71  ELSTKSTNNVTFADLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGK 130
           + +  +  + TFA+LGLS+W+V  C  L M+ PTAVQ  CIP+ L G DVLGIA+TGSGK
Sbjct: 70  DAAAAAVPS-TFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGK 129

Query: 131 TAAFALPILQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLN 190
           TAAFALPIL RL E P+GV AL + PTRELA QLAEQFRALG+ L LRC   +GG D L 
Sbjct: 130 TAAFALPILHRLGEDPYGVAALALAPTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSLG 189

Query: 191 QTQSLLKRPHIVIATPGRVKVLL-ENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIF 250
           Q + L +RPH+V+ATPGR+  L+ ++PD+  VF++TKFLVLDEADRVLD+ FEE+L+VIF
Sbjct: 190 QAKGLARRPHVVVATPGRIATLINDDPDLAKVFARTKFLVLDEADRVLDINFEEDLRVIF 249

Query: 251 QCLPRNRQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDL 310
             LP+ RQT LFSAT++ +L +LLELS N +YF+EAYEGFKTVD LKQ Y+ +P D K+L
Sbjct: 250 GSLPKKRQTFLFSATISDNLRSLLELSGNNSYFFEAYEGFKTVDTLKQLYIHVPPDAKEL 309

Query: 311 YLLHILSKMEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRF 370
           YL ++LSKM +  IRS I+FV TC++C  L  LLE L     +LHS K QS RLAAL+ F
Sbjct: 310 YLFYLLSKMNEDNIRSVIVFVSTCRTCQYLDFLLEELGHPAVSLHSHKPQSRRLAALHNF 369

Query: 371 KSGQVPVLLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQ 430
           KS +VPVLLATDVASRGLDI TVDLVINYD+PR+PRDY+HRVGRTARA RGGL++SFIT 
Sbjct: 370 KSSKVPVLLATDVASRGLDIQTVDLVINYDVPRYPRDYIHRVGRTARATRGGLSISFITT 429

Query: 431 RTVTLYDACKLPLSYAYLDRQMCNDVQLIHEIEANLGKQLEIFECKENEVLENITKVYKA 490
           +                       D++L+HEIE  +GKQL  ++ +  +V ++ TKV+KA
Sbjct: 430 Q----------------------RDIRLLHEIEDVVGKQLGAYDGEMRDVNKDATKVFKA 489

Query: 491 RHVAKMKMVDDGFEEKVKERKKQKLKTLAEKGLMKKRNKRRRK 515
           R +A MKM D+G E+KV+ RK+QK          K+  +R+RK
Sbjct: 490 RRLANMKMADEGHEDKVQARKEQK----------KRAQERKRK 498

[Close]

BLAST of Clc02G19710 vs. ExPASy Swiss-Prot
Match: Q9Y6V7 (Probable ATP-dependent RNA helicase DDX49 OS=Homo sapiens OX=9606 GN=DDX49 PE=1 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 5.0e-104
Identity = 219/473 (46.30%), Postives = 300/473 (63.42%), Query Frame = 0


Query: 64  FADLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQR 123
           FA+LGLS W+V+ C++L +K+PT VQ  CIP IL G D LG A+TGSGKTAAF LPILQ+
Sbjct: 4   FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63

Query: 124 LSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKRPHI 183
           LSE P+G+F LV+TPTRELAYQ+AEQFR LG  L L+  ++VGGMDM+ Q   L ++PH+
Sbjct: 64  LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHV 123

Query: 184 VIATPGRVKVLLENPDIPVVFSKTKFLVLDEADRVLDVG---FEEELKVIFQCLPRNRQT 243
           VIATPGR+   L + +      K +FLV+DEADR+L+ G   F  +L+ I   +P  RQT
Sbjct: 124 VIATPGRLADHLRSSN-TFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVPARRQT 183

Query: 244 LLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSKM 303
           LLFSAT+T  L  L  L+ N+ +F+EA     TV+ L Q+Y+ +P+ VKD YL+H++ + 
Sbjct: 184 LLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQLDQRYLLVPEKVKDAYLVHLIQRF 243

Query: 304 EDMGIR-SAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVL 363
           +D     S IIF  TCK+C +L ++L        ALHS   Q ER AAL +FKS    +L
Sbjct: 244 QDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKSSIYRIL 303

Query: 364 LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQRTVTLYDA 423
           +ATDVASRGLDIPTV +VIN++ P  P+ Y+HRVGRTARAGR G A++ +TQ        
Sbjct: 304 IATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQ-------- 363

Query: 424 CKLPLSYAYLDRQMCNDVQLIHEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKM 483
                           D+ L+H IE  + K+LE F  +E EVL+ +T+V   R   ++K+
Sbjct: 364 ---------------YDIHLVHAIEEQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIKL 423

Query: 484 VDDGFEEKVKERKKQKL-----------KTLAEKGLMKKRNKRRRKEKTSQII 522
               F+EK +  K+++L           K  AE   +K++N RR KEK  + +
Sbjct: 424 EAAHFDEKKEINKRKQLILEGKDPDLEAKRKAELAKIKQKN-RRFKEKVEETL 451

[Close]

BLAST of Clc02G19710 vs. ExPASy Swiss-Prot
Match: Q4FZF3 (Probable ATP-dependent RNA helicase DDX49 OS=Mus musculus OX=10090 GN=Ddx49 PE=2 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 1.6e-102
Identity = 216/473 (45.67%), Postives = 301/473 (63.64%), Query Frame = 0


Query: 64  FADLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQR 123
           FA++GLS W+V+ C++L +K+PT VQ  CIP IL G D LG A+TGSGKTAAF LPILQ+
Sbjct: 4   FAEIGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63

Query: 124 LSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKRPHI 183
           LSE P+G+F LV+TPTRELAYQ+AEQFR LG  L L+  ++VGGMDM+ Q   L ++PH+
Sbjct: 64  LSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHV 123

Query: 184 VIATPGRVKVLLENPDIPVVFSKTKFLVLDEADRVLDVG---FEEELKVIFQCLPRNRQT 243
           VIATPGR+   L + +      K +FLV+DEADR+L+ G   F  +L+ I   +P  RQT
Sbjct: 124 VIATPGRLADHLRSSN-TFNMKKIQFLVMDEADRLLEQGCTDFTTDLETILAAVPARRQT 183

Query: 244 LLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSKM 303
           LLFSAT+T  L+ L  L+ N+ +F+EA    +TV+ L Q+Y+ +P+ VKD YL+H++   
Sbjct: 184 LLFSATLTDTLKELQGLATNEPFFWEAQATVRTVEQLDQRYLLVPEKVKDAYLVHLVQTF 243

Query: 304 ED-MGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVL 363
           +D +   S IIF  TCK+C +L ++L   +    ALHS   Q ER AAL +FKS    +L
Sbjct: 244 QDQLEDCSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSSIYRIL 303

Query: 364 LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQRTVTLYDA 423
           +ATDVASRGLDIPTV +VIN++ P  P+ Y+HRVGRTARAGR G A++ +TQ        
Sbjct: 304 IATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQ-------- 363

Query: 424 CKLPLSYAYLDRQMCNDVQLIHEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKM 483
                           D+ L+H IE  + +QL     +E EVL+ +T+V   R   ++K+
Sbjct: 364 ---------------YDIHLLHAIEEQIKQQLAELVVEEAEVLQILTQVNVVRRECEIKL 423

Query: 484 VDDGFEEKVKERKKQKL-----------KTLAEKGLMKKRNKRRRKEKTSQII 522
               F+EK +  K++++           K  AE   +K++N RR KEK  Q +
Sbjct: 424 EASHFDEKKEINKRKQMILEGKDPDLEAKRKAELAKIKQQN-RRFKEKVGQTL 451

[Close]

BLAST of Clc02G19710 vs. ExPASy Swiss-Prot
Match: Q55BR9 (Probable ATP-dependent RNA helicase ddx49 OS=Dictyostelium discoideum OX=44689 GN=ddx49 PE=3 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 8.3e-99
Identity = 209/452 (46.24%), Postives = 289/452 (63.94%), Query Frame = 0


Query: 63  TFADLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQ 122
           TF +LGL+ W+V  CK+L  K P+ +Q + IP+IL G D++  A+TGSGKTA+FA+PIL 
Sbjct: 5   TFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPILN 64

Query: 123 RLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKRPH 182
           +LSE P+GVFA+++TPTRELA Q+ EQF A+G+ +N+ CSVV+GG+D + Q   L KRPH
Sbjct: 65  QLSEDPYGVFAVILTPTRELAVQIGEQFNAIGAPMNVNCSVVIGGIDNVTQALILDKRPH 124

Query: 183 IVIATPGRVKVLLENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCL--PRNRQT 242
           I++ATPGR+   L N  + +     KFLVLDEADR+L   FE E+  I + L  P  RQT
Sbjct: 125 IIVATPGRLASHLNN-GLKIALKFCKFLVLDEADRLLGEDFELEIASILEHLPPPEKRQT 184

Query: 243 LLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSKM 302
           LLFSATMTK+L  L  ++ NK + +E    + TVD LKQ+Y+++P   KD YL++IL K 
Sbjct: 185 LLFSATMTKNLTKLDSIALNKPFIFEDNSKYDTVDTLKQEYIYMPAPTKDCYLVYILKKH 244

Query: 303 EDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVLL 362
           E     SAI+FV  C +   +  +L  LD    +LHSF  Q  RLAAL  FKSG+V VL+
Sbjct: 245 EG---SSAIVFVNNCYAVEAVKGMLNKLDIPSVSLHSFLDQKSRLAALKTFKSGKVKVLV 304

Query: 363 ATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQRTVTLYDAC 422
           ATDVASRGLDIP V +VINY +    +DY+HRVGRTAR GR G A+SFIT          
Sbjct: 305 ATDVASRGLDIPDVQIVINYKLSNSSKDYIHRVGRTARFGRSGRAISFITP--------- 364

Query: 423 KLPLSYAYLDRQMCNDVQLIHEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKMV 482
                         +DV LI  IE  + KQLE+++  ++EV  ++ +   AR + ++ + 
Sbjct: 365 --------------HDVSLIKGIEEIIKKQLELYKTDDDEVFRHLKEASTARKIVEIHLD 424

Query: 483 DDGFEEKVKERKKQKLKTLAEKGLMKKRNKRR 513
           +  F  K KER+ ++ +   +K L +  NK +
Sbjct: 425 EIEFGVKQKERRTERNE--LQKQLKEVNNKEK 427

[Close]

BLAST of Clc02G19710 vs. ExPASy TrEMBL
Match: A0A5D3CBL8 (DEAD-box ATP-dependent RNA helicase 36 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3734G00060 PE=3 SV=1)

HSP 1 Score: 892.1 bits (2304), Expect = 1.1e-255
Identity = 477/518 (92.08%), Postives = 483/518 (93.24%), Query Frame = 0


Query: 1   MDQEVLVDESFPLFSKSHRKKHKPSGNPNAAPVSTAVENIAPKKSLQIEKSTELSTKSTN 60
           MDQEV+VD +FPLFSK HRKKHKPS NP A     AVENIAPK SLQIEKSTEL+TKSTN
Sbjct: 1   MDQEVIVDANFPLFSKPHRKKHKPSENPTA-----AVENIAPKSSLQIEKSTELTTKSTN 60

Query: 61  NVTFADLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI 120
           NVTF+DLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI
Sbjct: 61  NVTFSDLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI 120

Query: 121 LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKR 180
           LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDML+QTQSLLKR
Sbjct: 121 LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLSQTQSLLKR 180

Query: 181 PHIVIATPGRVKVLL-ENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ 240
           PHIVIATPGRVKVLL ENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ
Sbjct: 181 PHIVIATPGRVKVLLEENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ 240

Query: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSK 300
           TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSK
Sbjct: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSK 300

Query: 301 MEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVL 360
           MEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVL
Sbjct: 301 MEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVL 360

Query: 361 LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQRTVTLYDA 420
           LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQ        
Sbjct: 361 LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQ-------- 420

Query: 421 CKLPLSYAYLDRQMCNDVQLIHEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKM 480
                          NDV LIHEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKM
Sbjct: 421 ---------------NDVHLIHEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKM 480

Query: 481 VDDGFEEKVKERKKQKLKTLAEKGLMKKRNKRRRKEKT 518
           VDDGFEEKVKERKKQKLKTLAEKGL+KKRNKRRRKEKT
Sbjct: 481 VDDGFEEKVKERKKQKLKTLAEKGLLKKRNKRRRKEKT 490

[Close]

BLAST of Clc02G19710 vs. ExPASy TrEMBL
Match: A0A1S3C309 (DEAD-box ATP-dependent RNA helicase 36 OS=Cucumis melo OX=3656 GN=LOC103496288 PE=3 SV=1)

HSP 1 Score: 892.1 bits (2304), Expect = 1.1e-255
Identity = 477/518 (92.08%), Postives = 483/518 (93.24%), Query Frame = 0


Query: 1   MDQEVLVDESFPLFSKSHRKKHKPSGNPNAAPVSTAVENIAPKKSLQIEKSTELSTKSTN 60
           MDQEV+VD +FPLFSK HRKKHKPS NP A     AVENIAPK SLQIEKSTEL+TKSTN
Sbjct: 1   MDQEVIVDANFPLFSKPHRKKHKPSENPTA-----AVENIAPKSSLQIEKSTELTTKSTN 60

Query: 61  NVTFADLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI 120
           NVTF+DLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI
Sbjct: 61  NVTFSDLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI 120

Query: 121 LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKR 180
           LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDML+QTQSLLKR
Sbjct: 121 LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLSQTQSLLKR 180

Query: 181 PHIVIATPGRVKVLL-ENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ 240
           PHIVIATPGRVKVLL ENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ
Sbjct: 181 PHIVIATPGRVKVLLEENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ 240

Query: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSK 300
           TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSK
Sbjct: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSK 300

Query: 301 MEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVL 360
           MEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVL
Sbjct: 301 MEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVL 360

Query: 361 LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQRTVTLYDA 420
           LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQ        
Sbjct: 361 LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQ-------- 420

Query: 421 CKLPLSYAYLDRQMCNDVQLIHEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKM 480
                          NDV LIHEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKM
Sbjct: 421 ---------------NDVHLIHEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKM 480

Query: 481 VDDGFEEKVKERKKQKLKTLAEKGLMKKRNKRRRKEKT 518
           VDDGFEEKVKERKKQKLKTLAEKGL+KKRNKRRRKEKT
Sbjct: 481 VDDGFEEKVKERKKQKLKTLAEKGLLKKRNKRRRKEKT 490

[Close]

BLAST of Clc02G19710 vs. ExPASy TrEMBL
Match: A0A0A0KD72 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G136530 PE=3 SV=1)

HSP 1 Score: 881.7 bits (2277), Expect = 1.5e-252
Identity = 469/520 (90.19%), Postives = 481/520 (92.50%), Query Frame = 0


Query: 1   MDQEVLVDESFPLFSKSHRKKHKPSGNPNAAPVSTAVENIAPKKSLQIEKSTELSTKSTN 60
           MDQEV+VD +FPLFSK HRKKHKPS NP      TAV N+APKKSLQIEKSTEL+TKSTN
Sbjct: 1   MDQEVIVDRNFPLFSKPHRKKHKPSENP------TAVPNVAPKKSLQIEKSTELTTKSTN 60

Query: 61  NVTFADLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI 120
           N+TFADLGLSEWI+QTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI
Sbjct: 61  NITFADLGLSEWIIQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI 120

Query: 121 LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKR 180
           LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKR
Sbjct: 121 LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKR 180

Query: 181 PHIVIATPGRVKVLLE-NPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ 240
           PHIVIATPGR+KVLLE NPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ
Sbjct: 181 PHIVIATPGRIKVLLEDNPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ 240

Query: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSK 300
           TLLFSATMTKDLETL +LSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLH+LSK
Sbjct: 241 TLLFSATMTKDLETLHKLSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHLLSK 300

Query: 301 MEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVL 360
           MEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHS KSQSERLAALYRFKSG+VPVL
Sbjct: 301 MEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSVKSQSERLAALYRFKSGRVPVL 360

Query: 361 LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQRTVTLYDA 420
           LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQ        
Sbjct: 361 LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQ-------- 420

Query: 421 CKLPLSYAYLDRQMCNDVQLIHEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKM 480
                          NDV LIHEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKM
Sbjct: 421 ---------------NDVHLIHEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKM 480

Query: 481 VDDGFEEKVKERKKQKLKTLAEKGLMKKRNKRRRKEKTSQ 520
           VD GFEEKVKERKKQK KTLAEKGL+KKRNKRRRKEKTS+
Sbjct: 481 VDGGFEEKVKERKKQKRKTLAEKGLLKKRNKRRRKEKTSE 491

[Close]

BLAST of Clc02G19710 vs. ExPASy TrEMBL
Match: A0A6J1D9D5 (DEAD-box ATP-dependent RNA helicase 36 OS=Momordica charantia OX=3673 GN=LOC111018118 PE=3 SV=1)

HSP 1 Score: 849.4 bits (2193), Expect = 8.2e-243
Identity = 451/521 (86.56%), Postives = 476/521 (91.36%), Query Frame = 0


Query: 1   MDQEVLVDESFPLFSKSHRKKHKPSGNPNAAPVSTAVENIAPKKSLQIEKSTELSTKSTN 60
           MD+EV VDE+FPLF+KSHRKKHKPS NP   PVST VE IA KK LQ+EKST+L+T STN
Sbjct: 1   MDEEVTVDENFPLFAKSHRKKHKPSQNPTGGPVSTIVETIASKKPLQVEKSTDLATTSTN 60

Query: 61  NVTFADLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPI 120
           NVTFADLGLSEWIV+TCKEL M+KPTAVQTHCIPKILAGLDVLG+AQTGSGKTAAFALPI
Sbjct: 61  NVTFADLGLSEWIVRTCKELAMRKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALPI 120

Query: 121 LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKR 180
           LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGS L+LRCSVVVGGMDMLNQ QSLLKR
Sbjct: 121 LQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLHLRCSVVVGGMDMLNQAQSLLKR 180

Query: 181 PHIVIATPGRVKVLL-ENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ 240
           PHIVIATPGRVKVLL ENPDIP+VFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ
Sbjct: 181 PHIVIATPGRVKVLLEENPDIPLVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ 240

Query: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSK 300
           TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTV+MLKQQYVFIPK+VKD+YLLHILSK
Sbjct: 241 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVEMLKQQYVFIPKNVKDVYLLHILSK 300

Query: 301 MEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVL 360
           MEDMGIRSAIIFVQTC+SCHLLGLLLE LDQEVAALHSFKSQS+RLAALYRFKSGQVPVL
Sbjct: 301 MEDMGIRSAIIFVQTCRSCHLLGLLLEELDQEVAALHSFKSQSQRLAALYRFKSGQVPVL 360

Query: 361 LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQRTVTLYDA 420
           LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQ        
Sbjct: 361 LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQ-------- 420

Query: 421 CKLPLSYAYLDRQMCNDVQLIHEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMKM 480
                          NDV+LIHEIEA +GKQLE FECKENEVLENITKVYKAR VA MKM
Sbjct: 421 ---------------NDVELIHEIEAVVGKQLENFECKENEVLENITKVYKARRVAAMKM 480

Query: 481 VDDGFEEKVKERKKQKLKTLAEKGLMKKRNK-RRRKEKTSQ 520
           VDDGFEEKVKERKKQK KTLAEKGL+KK+ + ++R+EKTS+
Sbjct: 481 VDDGFEEKVKERKKQKQKTLAEKGLLKKKKRSKKRREKTSE 498

[Close]

BLAST of Clc02G19710 vs. ExPASy TrEMBL
Match: A0A6J1G6B4 (DEAD-box ATP-dependent RNA helicase 36 OS=Cucurbita moschata OX=3662 GN=LOC111451228 PE=3 SV=1)

HSP 1 Score: 839.3 bits (2167), Expect = 8.5e-240
Identity = 449/525 (85.52%), Postives = 473/525 (90.10%), Query Frame = 0


Query: 1   MDQEVLVDESFPLFSKSHRKKHKPS-GNPNAAPVSTAVENIAPKKSLQIEKSTELSTKST 60
           MDQEV VDE+FPLFSKSHRK HKPS  NP AA VS AV+N A K  +QIEKSTEL+TKST
Sbjct: 1   MDQEVTVDENFPLFSKSHRKTHKPSQKNPTAAAVSAAVDNTAEKAPIQIEKSTELTTKST 60

Query: 61  NNVTFADLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALP 120
            NVTFADLGLSEWIVQTCKEL MKKPTAVQTHCIPKILAGLDVLG+AQTGSGKTAAFALP
Sbjct: 61  -NVTFADLGLSEWIVQTCKELAMKKPTAVQTHCIPKILAGLDVLGLAQTGSGKTAAFALP 120

Query: 121 ILQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLK 180
           ILQ+LSETPFGVFALVVTPTRELAYQLAEQFRALGS LNLRCSVVVGGMDMLNQTQSLLK
Sbjct: 121 ILQQLSETPFGVFALVVTPTRELAYQLAEQFRALGSSLNLRCSVVVGGMDMLNQTQSLLK 180

Query: 181 RPHIVIATPGRVKVLL-ENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNR 240
           RPHIVIATPGRVKVLL ENPDIP VFSKTKFLVLDEADRVLDVGFEEELKVIF+CLPRNR
Sbjct: 181 RPHIVIATPGRVKVLLEENPDIPAVFSKTKFLVLDEADRVLDVGFEEELKVIFKCLPRNR 240

Query: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILS 300
           QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPK+VKD+YLLHI+S
Sbjct: 241 QTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKNVKDVYLLHIMS 300

Query: 301 KMEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPV 360
           KM+DMG+RSAIIFV TCKSCH LGLLL  LDQ+V ALHSFKSQSERLAALYRFKSGQ PV
Sbjct: 301 KMKDMGVRSAIIFVHTCKSCHHLGLLLGELDQDVVALHSFKSQSERLAALYRFKSGQAPV 360

Query: 361 LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQRTVTLYD 420
           LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGR GLAVSFITQ       
Sbjct: 361 LLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRHGLAVSFITQ------- 420

Query: 421 ACKLPLSYAYLDRQMCNDVQLIHEIEANLGKQLEIFECKENEVLENITKVYKARHVAKMK 480
                           NDV+LIHEIEANLGK+LEIFECKENEVLEN+TKVYKAR VA MK
Sbjct: 421 ----------------NDVELIHEIEANLGKKLEIFECKENEVLENVTKVYKARRVAAMK 480

Query: 481 MVDDGFEEKVKERKKQKLKTLAEKGLMKKRNKRRRKEKTSQIIGS 524
           MVDDGFEEKVKERKKQK K LAEKGL+KKR+++RR+EK S+ +G+
Sbjct: 481 MVDDGFEEKVKERKKQKFKILAEKGLLKKRSRKRRREKASKELGA 501

[Close]

BLAST of Clc02G19710 vs. TAIR 10
Match: AT1G16280.1 (RNA helicase 36 )

HSP 1 Score: 603.6 bits (1555), Expect = 1.5e-172
Identity = 320/470 (68.09%), Postives = 379/470 (80.64%), Query Frame = 0


Query: 47  QIEKST--ELSTKSTNNVTFADLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLG 106
           Q EK T    S+ +T+   F  LGL+EW V+TCKEL M+KPT VQTHC+PKILAG DVLG
Sbjct: 41  QFEKFTNPNPSSDTTSATNFEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLG 100

Query: 107 IAQTGSGKTAAFALPILQRLSETPFGVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVV 166
           +AQTGSGKTAAFALPIL RL+E P+GVFALVVTPTRELA+QLAEQF+ALGSCLNLRCSV+
Sbjct: 101 LAQTGSGKTAAFALPILHRLAEDPYGVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVI 160

Query: 167 VGGMDMLNQTQSLLKRPHIVIATPGRVKVLLE-NPDIPVVFSKTKFLVLDEADRVLDVGF 226
           VGGMDML QT SL+ RPHIVI TPGR+KVLLE NPD+P VFS+TKFLVLDEADRVLDVGF
Sbjct: 161 VGGMDMLTQTMSLVSRPHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGF 220

Query: 227 EEELKVIFQCLPRNRQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVF 286
           ++EL+ IFQCLP++RQTLLFSATMT +L+ LLE S+NKAYFYEAYEG KTVD L QQ++F
Sbjct: 221 QDELRTIFQCLPKSRQTLLFSATMTSNLQALLEHSSNKAYFYEAYEGLKTVDTLTQQFIF 280

Query: 287 IPKDVKDLYLLHILSKMEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSE 346
             KD K+LYL+HILS+MED GIRSA+IFV TC++C  L L+L+ L+ E  A+HS  SQS 
Sbjct: 281 EDKDAKELYLVHILSQMEDKGIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSM 340

Query: 347 RLAALYRFKSGQVPVLLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGG 406
           RL+AL +FKSG+VP+LLATDVASRGLDIPTVDLVINYDIPR PRDYVHRVGRTARAGRGG
Sbjct: 341 RLSALSKFKSGKVPILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGG 400

Query: 407 LAVSFITQRTVTLYDACKLPLSYAYLDRQMCNDVQLIHEIEANLGKQLEIFECKENEVLE 466
           LAVS IT+                        DV+LIH+IE  +GK++E +  K      
Sbjct: 401 LAVSIITE-----------------------TDVKLIHKIEEEVGKKMEPYNKKVITDSL 460

Query: 467 NITKVYKARHVAKMKMVDDGFEEKVKERKKQKLKTLAEKGLMKKRNKRRR 514
            +TKV KA+ VA MKM+D+GFE+KVK+R+K K KTLA+KGL+KKR KR++
Sbjct: 461 EVTKVSKAKRVAMMKMLDNGFEDKVKDRRKLKRKTLADKGLLKKRGKRQK 487

[Close]

BLAST of Clc02G19710 vs. TAIR 10
Match: AT5G60990.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 317.8 bits (813), Expect = 1.7e-86
Identity = 198/472 (41.95%), Postives = 282/472 (59.75%), Query Frame = 0


Query: 63  TFADLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQ 122
           TFA+LG+ E +V+ C+ L  K P+ +Q   +P  L G DV+G+AQTGSGKT AFA+PILQ
Sbjct: 10  TFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQ 69

Query: 123 RLSETPF------------GVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDM 182
            L E  +              FA V++PTRELA Q+AEQF ALG+ ++LRC+V+VGG+D 
Sbjct: 70  ALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDR 129

Query: 183 LNQTQSLLKRPHIVIATPGRVKVLLENPDIPVVFS--KTKFLVLDEADRVLDVGFEEELK 242
           + QT +L KRPH+++ATPGR   L ++      FS    K+LVLDEADR+L+  FE+ L 
Sbjct: 130 MQQTIALGKRPHVIVATPGR---LWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLN 189

Query: 243 VIFQCLPRNRQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDV 302
            I + +P  R+T LFSATMTK +  L           EA   + TVD LKQQY F+    
Sbjct: 190 QILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVAAKY 249

Query: 303 KDLYLLHILSKMEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAAL 362
           KD YL++ILS+M +    +++IF +TC     L L+L +L      +    +QS+RL AL
Sbjct: 250 KDCYLVYILSEMPE---STSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGAL 309

Query: 363 YRFKSGQVPVLLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSF 422
            +FK+G+  +L+ TDVASRGLDIP+VD+VINYDIP   +DY+HRVGRTARAGR G+ +S 
Sbjct: 310 NKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISL 369

Query: 423 ITQRTVTLYDACKLPLSYAYLDRQMCNDVQLIHEIEANLGKQLEIFECKENEVLENITKV 482
           + Q  +  Y                        +IE  +GK+L  +  +E+EVL  + +V
Sbjct: 370 VNQYELEWY-----------------------IQIEKLIGKKLPEYPAEEDEVLSLLERV 429

Query: 483 YKARHVAKMKMVDDGFEEKVKERKKQKLKTLAEKGLMKKRNKRR--RKEKTS 519
            +A+ ++ M M + G  ++  E  ++  + L   G   + NK R   K+K S
Sbjct: 430 AEAKKLSAMNMKESGGRKRRGEDDEESERFLG--GNKDRGNKERGGNKDKKS 450

[Close]

BLAST of Clc02G19710 vs. TAIR 10
Match: AT4G16630.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 241.9 bits (616), Expect = 1.2e-63
Identity = 150/351 (42.74%), Postives = 205/351 (58.40%), Query Frame = 0


Query: 63  TFADLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQ 122
           TF +L LS  +++ C+ L  KKPT +Q  CIP  L G D+   A TGSGKTAAFALP L+
Sbjct: 168 TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 227

Query: 123 RLSETPFGVFA---LVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLK 182
           RL   P  VFA   L++TPTRELA Q+    + L    +++C ++VGG+ +  Q   L  
Sbjct: 228 RLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRS 287

Query: 183 RPHIVIATPGRVKVLLENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRNRQ 242
            P IV+ATPGR+   L N  + V       L+LDEADR+L  GF  E+  + +  P+ RQ
Sbjct: 288 MPDIVVATPGRMIDHLRN-SMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQ 347

Query: 243 TLLFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSK 302
           T+LFSATMT++++ L++LS NK     A    +    L ++ V I +  +      +LS 
Sbjct: 348 TMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLSL 407

Query: 303 MEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVPVL 362
                    IIF  T ++ H L +L      + A LH   +Q++RL +L  F+  +V  L
Sbjct: 408 CTRTFKSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDFL 467

Query: 363 LATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFIT 411
           +ATDVA+RGLDI  V  VINY  PR    YVHRVGRTARAGR G AV+F+T
Sbjct: 468 IATDVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAGREGYAVTFVT 517

[Close]

BLAST of Clc02G19710 vs. TAIR 10
Match: AT5G65900.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 223.0 bits (567), Expect = 5.6e-58
Identity = 153/447 (34.23%), Postives = 229/447 (51.23%), Query Frame = 0


Query: 2   DQEVLVDESFPLFSKSHRKKHKPSGNPNAAPVSTAVENIAPKKSLQIEKSTELSTKSTNN 61
           + EV+ +E  P      +KK K   +  A      VE+   +K L+        T    N
Sbjct: 106 EDEVIAEEEEP-----KKKKKKQRKDTEAKSEEEEVEDKEEEKKLE-------ETSIMTN 165

Query: 62  VTFADLGLSEWIVQTCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPIL 121
            TF  L LS+   ++ KE+   + T +Q   IP ++ G DVLG A+TGSGKT AF +P +
Sbjct: 166 KTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAV 225

Query: 122 QRLSETPF----GVFALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSL 181
           + L    F    G   LV+ PTRELA Q     + L    +     V+GG     + + L
Sbjct: 226 ELLYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRKTEAEIL 285

Query: 182 LKRPHIVIATPGRVKVLLENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCLPRN 241
            K  ++++ATPGR+   LEN +   +F   KFLV+DEADR+L+  FEE+LK I   LP+ 
Sbjct: 286 AKGVNLLVATPGRLLDHLENTN-GFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKT 345

Query: 242 RQTLLFSATMTKDLETLLELSANKAYFYEAYEGFKTV--DMLKQQYVFIPKDVKDLYLLH 301
           RQT LFSAT +  +E L  +S     + +  EG K V  + L+Q Y  +P  ++ L+LL 
Sbjct: 346 RQTSLFSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCVVPSAMRLLFLLT 405

Query: 302 ILSKMEDMGIRSAIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQ 361
            L + +  G +  ++F  TCKS      L   +  +   +     Q++R     +F   +
Sbjct: 406 FLKRFQ--GKKKIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGIDQNKRTPTFLQFIKAE 465

Query: 362 VPVLLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARA-GRGGLAVSFITQ--- 421
             +LL T+VA+RGLD P VD ++ YD P  P DY+HRVGRTAR  G  G A+  +T    
Sbjct: 466 TGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARGEGAKGKALLVLTPQEL 525

Query: 422 RTVTLYDACKLPLSYAYLDRQMCNDVQ 439
           + +    A K+P+     + +   DV+
Sbjct: 526 KFIQYLKAAKIPVEEHEFEEKKLLDVK 537

[Close]

BLAST of Clc02G19710 vs. TAIR 10
Match: AT3G58570.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 220.3 bits (560), Expect = 3.6e-57
Identity = 153/419 (36.52%), Postives = 223/419 (53.22%), Query Frame = 0


Query: 24  PSGNP-NAAPV----STAVENIAPKKSLQIEKSTELSTKSTNNVTFADLGLSEWI---VQ 83
           P GN  NA P        V N    + + IE S +      N  TFA++ L E +   +Q
Sbjct: 105 PFGNDGNADPAVNEQENTVINFEAYEDIPIETSGDNVPPPVN--TFAEIDLGEALNLNIQ 164

Query: 84  TCKELVMKKPTAVQTHCIPKILAGLDVLGIAQTGSGKTAAFALPILQRLS-----ETPFG 143
            CK +   KPT VQ + IP + AG D++  AQTGSGKTAAF  PI+  +      E P G
Sbjct: 165 RCKYV---KPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRG 224

Query: 144 V-----FALVVTPTRELAYQLAEQFRALGSCLNLRCSVVVGGMDMLNQTQSLLKRPHIVI 203
           V      A++++PTRELA Q+ ++ R       ++  V  GG  +  Q + L +   I++
Sbjct: 225 VRGVYPLAVILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILV 284

Query: 204 ATPGRVKVLLENPDIPVVFSKTKFLVLDEADRVLDVGFEEELKVIFQCL----PRNRQTL 263
           ATPGR+  LLE   + +     +FL LDEADR+LD+GFE +++ I Q +    P  RQT+
Sbjct: 285 ATPGRLNDLLERGRVSL--QMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTM 344

Query: 264 LFSATMTKDLETLLELSANKAYFYEAYEGFKTVDMLKQQYVFIPKDVKDLYLLHILSKME 323
           LFSAT  ++++ L     +   F        + D++ Q+  F+    K  +L+ +L    
Sbjct: 345 LFSATFPREIQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEFVHDSDKRSHLMDLLHAQR 404

Query: 324 DMGIRS----AIIFVQTCKSCHLLGLLLEALDQEVAALHSFKSQSERLAALYRFKSGQVP 383
           + G +      ++FV+T K    L   L         +H  +SQ ER  AL  FK+G+ P
Sbjct: 405 ENGNQGKQALTLVFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTP 464

Query: 384 VLLATDVASRGLDIPTVDLVINYDIPRFPRDYVHRVGRTARAGRGGLAVSFITQRTVTL 417
           +L+ATDVA+RGLDIP V  V+N+D+P    DYVHR+GRT RAG  GLA +F      T+
Sbjct: 465 ILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLATAFFNDNNTTM 516

The following BLAST results are available for this feature:

BLAST of Clc02G19710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900331.1	2.2e-258	91.92	DEAD-box ATP-dependent RNA helicase 36 [Benincasa hispida]	[more]
XP_008456302.1	2.3e-255	92.08	PREDICTED: DEAD-box ATP-dependent RNA helicase 36 [Cucumis melo] >KAA0054684.1 D...	[more]
XP_004139902.1	3.1e-252	90.19	DEAD-box ATP-dependent RNA helicase 36 [Cucumis sativus] >KGN46799.1 hypothetica...	[more]
XP_022149766.1	1.7e-242	86.56	DEAD-box ATP-dependent RNA helicase 36 [Momordica charantia]	[more]
KAG6605347.1	1.1e-241	86.10	DEAD-box ATP-dependent RNA helicase 36, partial [Cucurbita argyrosperma subsp. s...	[more]

BLAST of Clc02G19710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SA27	2.1e-171	68.09	DEAD-box ATP-dependent RNA helicase 36 OS=Arabidopsis thaliana OX=3702 GN=RH36 P...	[more]
Q8L4E9	8.7e-141	53.54	DEAD-box ATP-dependent RNA helicase 36 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9Y6V7	5.0e-104	46.30	Probable ATP-dependent RNA helicase DDX49 OS=Homo sapiens OX=9606 GN=DDX49 PE=1 ...	[more]
Q4FZF3	1.6e-102	45.67	Probable ATP-dependent RNA helicase DDX49 OS=Mus musculus OX=10090 GN=Ddx49 PE=2...	[more]
Q55BR9	8.3e-99	46.24	Probable ATP-dependent RNA helicase ddx49 OS=Dictyostelium discoideum OX=44689 G...	[more]

BLAST of Clc02G19710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CBL8	1.1e-255	92.08	DEAD-box ATP-dependent RNA helicase 36 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3C309	1.1e-255	92.08	DEAD-box ATP-dependent RNA helicase 36 OS=Cucumis melo OX=3656 GN=LOC103496288 P...	[more]
A0A0A0KD72	1.5e-252	90.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G136530 PE=3 SV=1	[more]
A0A6J1D9D5	8.2e-243	86.56	DEAD-box ATP-dependent RNA helicase 36 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1G6B4	8.5e-240	85.52	DEAD-box ATP-dependent RNA helicase 36 OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]

BLAST of Clc02G19710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16280.1	1.5e-172	68.09	RNA helicase 36	[more]
AT5G60990.1	1.7e-86	41.95	DEA(D/H)-box RNA helicase family protein	[more]
AT4G16630.1	1.2e-63	42.74	DEA(D/H)-box RNA helicase family protein	[more]
AT5G65900.1	5.6e-58	34.23	DEA(D/H)-box RNA helicase family protein	[more]
AT3G58570.1	3.6e-57	36.52	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 81..280 e-value: 1.0E-50 score: 184.5
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 93..265 score: 30.68535
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 319..400 e-value: 1.3E-29 score: 114.4
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 292..400 e-value: 2.0E-27 score: 95.7
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 276..462 score: 21.463608
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 273..521 e-value: 1.1E-45 score: 158.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 32..266 e-value: 1.9E-70 score: 239.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 130..416
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 86..254 e-value: 2.3E-43 score: 148.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 499..523
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 61..515
None	No IPR available	PANTHER	PTHR24031:SF240	ATP-DEPENDENT RNA HELICASE DDX49-RELATED	coord: 61..515
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 277..409 e-value: 2.47998E-54 score: 177.314
None	No IPR available	CDD	cd17955	DEADc_DDX49	coord: 64..266 e-value: 6.59795E-119 score: 346.519
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 211..219
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 62..90 score: 10.249158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G19710.2	Clc02G19710.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009561	megagametogenesis
biological_process	GO:0009791	post-embryonic development
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005634	nucleus
cellular_component	GO:0090406	pollen tube
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003724	RNA helicase activity