
Clc02G19690 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGTCTTTGAAATTTGGGTCAAAATTAGTGGCGGTTGCTGCCTTCCCACCAGTCTTAGGACGTCAAAGACACTTGAGAAATCTTTGCTGCTGTTCTAACCGTTTTCAGTCGAATGGTTTATCTTCTGAATGTCAGATTGATTTCAATTCACCATTGCCGTCGAGAGATTCTTCGTCTTTGGAAGGTTACATTTCAACTTTGTTGTATTTATGTCTGCAAAATTTGATGCTAGATTACCATTTACAAACGTAATATTGCCTTTGGGGTTATTGATTTTGATTCTTGGGATGCTAATTGCAAGTTTGATAGGGGGTTTAGTGAGGACATTATTGTTAATGCTTTGCATCATTTGACTTCTATTGAAATTTAATGTGTTCTTGTGAAACTGTGGATGATGTGATTTAGGACTCGAGGATGTCATGGTCGGCTATTTTTTTGGGAAGAAGAGAGCTACAGAAGTTGCTCACTCGTATGTATTTGTATTATCATTTATCAGCTAACTTTTTTTGGTGCATTTCTACATATGCTGTATGTTTTCTATTGTTTTAAATCTTTTGTACAATGGCCTCTCTTTTTGAATACAACGTTCTTGAGCTGTATATCCAAGGTTTAAAATTTCGATGTTGATAGAAGTATCGAAGTCTGTCAATTTCACTGAAATATTAGCAGAAATATCGATAAAATATTGATATCAATAGATATCTCTAGGAAAAAAAAAGAAATATAATTATTAAATAAATATTCCTTACGTTTAAAATAAATTAAAATGTTTATTACTCATATTATATTCACATTAGTGCTATTTTGTCTTTTATTTTTTATATTTCTTGGATTTTCTTACGATATAAAGTAAATGTATATTAACTCTTTATGTTAATGTTGAATTGATGAAAATGTGAAAATGTAAGATGGAAATATCGATATGTCGATGGAAATTTAATATCATGGCTTTATGGGTGTTAGTCTCCAACCCATGTCTTGTTTTTCTAAACACTGAAGTGCATCATGACTTCTGGAAATTTGTTCTACAGAAGATTTTGTATGATAGAAAGCTCACTAGTTCTTGCAGCTATCAATGTGAGTTGAGAATCATAGGCAGTGTGGAGTTGAGAGTTCATCATATTTGGAATATGGAGTAGGAATTTAGCCCATCTTGCTCATTAGTTTTCTGTTTGAGACAGTATTCAATATTCATCAAGATTCTAGAGTTCGGACTTTCTTTGGACTTCATTTGTTCCATCTTTTAGCTTGTTCACAAGTTACCACCCGTATTCAAAATACACAGAACCTTTTCCATCTTTTAGAATGTGACATTTTTTTATTTCTTGCTTTTTAGTTGTTGATCCTTCTGTTTTTGTGATGATGAGTATTAAAAGATAATCCATGGCTAGATATTAATTACTTGTCCTTTATCCATCAGTGTATGGAAACGTGTCGTCAGAAAAGGGGATACAGTGGTAGATGCTACTTGTGGAAACGGGTATGATACACTGGCTATGGTCAAAATGGTTGCAGATGAATCTGGTTCTGGGCATGTTTATGCAATGGACGTTCAGAAAGAGGCTTTAGAAAGTACTTCTGTGTTGCTGGACGAGTCACTCAGTGAAAAAGAGGTATCCTTTCGTCTATCACATTTTAGAGGAATCCATGATTTACTTCTAGTACATATACAGCCTATAACTTGTTCCAACTTATGGCCTACAGCCCAAAATTGTAATTATGATGGTTTTATATAGTCTAAAGTTTCTTTAGCATGGCAATATATGCTGATTTTATGTGAACCAATTATTTGTGACTTCGAGCTGCTCTTCAGGTTTCTTTTTGTCAATTCACTTTCAAGAAATGGGGATGAACAGATGACTTGACCTTCTGATTTGTGTAGTTTATCGTTAGAAATGTTTGTTTAAGTGCTTATAGTTTCTAGTTTTATGTAGAAGAAACTTGTTAAACTCTCTTCCATTTGCCACAGCAGAATGGAGGATGTCATTCCAGAGGATTCTCCCGTTAGGTAATGATTCCACATTTTCTACTTAGTAATGACATAGTATATATGAAGCCAAATTTGTGATTGTAATTGACACCTATCCTTCACTAATAGTTTGAATCTTGAACAATCATTTAAGAGAGTCGAGGAAGAAAAAGAAACAATTCAAACAAATTGATTATCTGTGATTAGATATATCAGTTAACGGTCCTCTATTTTTTAGGCTTGTTGCATTTAACCTAGGCTACCTACCTGGTGGTAACAAAGCAATTACTACAAAGTCAGAAACAACATTACAAGCACTTAAAGCTGCCAATAGAATTCTGAAACCTGGAGGGCTTATCAGCCTTGTGGTTTATGTGGGGCATCCTGGTGGACTGTAATACTTCTGCTCCTTCTCTTTTTCTTCCCACTGCAATCCATGCTTATTTCTCTATCCTAAAGATAGCAATTTTGGATTTTAAACTTTTATCTATTTATCTTTGTTGTGGACAAACCAAACCCTTGAATGCATCAACCGGTGCAAATTTCATCATCATCATCATCATCATTTTGATGGAAGTGTATATTTCATCTTTGTTCTTTCATCAGTAAAAATTAGTTTTAGAAGTTGATGGAATGGGTTACTTTAAGGCTAAATGCGTTCTTTGTTTCCATTTCAATGGGAGGACAGAGGTAGTAATTCAATCTCTTAACTTGGTATGTCCTTAGTTTCTTTAAATTAAATTATTGGAGGATCACTTCTTGGGGTTATATAAACACGCTGTTATGGACATGGGAACACTCACAACGATTTAAATAATGTCTGTCATTTAAGAGTTTATAGTCTGTGGCTGGTATGGCTTGGATAGTCTAGTGTGACATATTATTCTGCAACACTGAGTTGATTTTAGTTGTTGACAGACATTCTTGTTTGTTGTGTAATGGGTTTACTTTCTAATGTTTTAGGGAAGAATTGGAGACTATTGAAAAATTTTCTGGTGATCTGGCTGTTGAGAATTGGATTTGTTGTAAGCTTCAGATGTTAAACCGGCCATTAGCTCCAGTGCCTGTGTTTTTATTCAAGAGATGAAAGTGGTAAGCATTTTGTGTTCTTTCATATGAACAACTCCTAGCTTCTTCTTTTGTAAAAGAATGTTGGTTATCATCATTATATTTCTCAGAAAATGAAGAACTATTAGCATAACCTGTTGGATATTTCACAGCGAAAGAAAGTGAGACATTCTTGAATATCGAAGCATAAAAAAATAAATTTAATTATATAAATTAAATTCATGGATTGAAACTTTAGATTGGATTGAAACCATAAAATTTAGATGATGCTTCATGTACAAATTTAACATATATGAAAGTTAAATTTTTAGTTTCTTCAATTTGAATGAGTTATGTTTGATTTTGATCAAGTAATAACTCAATTGAGTTGATTTTGACAAATGTTTCGATTTTGTATTTATTTTATTCTATTTTTTATTATTTTAGAGAGTTGCTAAGTTGCTAGCCTGTAAATAGCAACATGTTTATTCATTTGGCTTATCCCATTTCAATTTGAAAGTGTTCTCTCCTTTCTTTCTTTCGTTTGATCTTGAGTTTAGTTGAGAGCAAGTATCCAAAAGTTCTGCCAGATTCGAGTAGTTTGAAGTTTTTGTTCTATCGGATTGGTCGTTGCATCCTGCTGAGACTATCGTTGGAGTTTGCTTGCAGCCTGTGTTGTGGAGCAAATAATTGTCTTAAGGACAACGCTTTGAAGCGTGTCTCAACTATCATTTGAATCTCCATAAGTTTTTGAGGTTTTTCTGGGTATTTCAATTTATAGGCCTTGTCATACAATCTAGCTTATTTTTGTGTTTGAACATTATTATTGTATACAGTGTGTATTGTAATTACTGTATCCAGTTGAGTGGTAAACAATTTGCTAGTGTTATTCAGTTTCTATATATAGTTTCCCCCAACATAACCAAATAAGAAGCTCCATGTAGTGGAGGCCTAGTATATAACCTCATCAAGTGACCAAGTTATGTCACCTTGGCTTGGATAGGAAGATTTCCACACCAAGACATATCCTCTACTTAGATCAAGTCAAATCCTATGATGTTTCGATTTGGATTTATTGGCTAGATCATATGACATAGCTATTGCTATATTCTAAACAACTATCTTGATGAGATTCATAGTAGTTTTGTTCAACTACAAGCATTATTCATAAGCCCTTCCATTCCATAATCGGTACTCATGATATGTCTCATCTTTAACTATCATGACTCTATTTCATATATAGATTTAGCCACAATTCAATTCTTAAGTCTATAAATTGAAACTTTCACAGCTAGTGATTGTAGACCCTTGTCTATTTGCCACCCAAGCACTTGGTTGAGCATTGGAGTAACTTCGATAATCATCATACAGATACCAGCAAGTTTTTTCATTCTCTTGAAAAGCCACCAAGTTTAGAGCAGGAGAAAGAGCTTGATGAATATGACTTGGGTCTTGTTGGTTTTGGTAACTGTCCTGTTGCAATTGAGGCAAAGCATTGATAAACTAGGCAAAACATGTGTAAAGAGGCTTGTAGCAATAGAGTTCCTATCACTAAATTTATTGTTTAATCTGAGCAATGAAAGTTTATTGATTTATGCTGTGAGTTATAACTTGTAAGAATTCTTTTTGCATTGGATATTTTGTTCAGATAATTGATGAAGTTGGTTTGAGAAGGCATTTATGGGACAATGCTTCTGGTTCACTTGCTATGGCCTCTTTTGGTAACCCTGTCGGCATTGGATTAATTTCATATCAATATCGTAATGTTACTTCATTACCACAATATAATGAACTATCTAAGGGAACTATCAAAAGGAGTACTATCAATTTTATATTATGTTGTATTACCACTTATTTCGAGTACAATCAATTTTATGTTATGTTGTACTACCACTTTTATGTTGAT ATGTTGTCTTTGAAATTTGGGTCAAAATTAGTGGCGGTTGCTGCCTTCCCACCAGTCTTAGGACGTCAAAGACACTTGAGAAATCTTTGCTGCTGTTCTAACCGTTTTCAGTCGAATGGTTTATCTTCTGAATGTCAGATTGATTTCAATTCACCATTGCCGTCGAGAGATTCTTCGTCTTTGGAAGGTTACATTTCAACTTTGTTGTATTTATGTCTGCAAAATTTGATGCTAGATTACCATTTACAAACGACTCGAGGATGTCATGGTCGGCTATTTTTTTGGGAAGAAGAGAGCTACAGAAGTTGCTCACTCATATTAATTACTTGTCCTTTATCCATCAGTGTATGGAAACGTGTCGTCAGAAAAGGGGATACAGTGGTAGATGCTACTTGTGGAAACGGGTATGATACACTGGCTATGGTCAAAATGGTTGCAGATGAATCTGGTTCTGGGCATGTTTATGCAATGGACGTTCAGAAAGAGGCTTTAGAAAGTACTTCTGTGTTGCTGGACGAGTCACTCAGTGAAAAAGAGAAGAAACTTGTTAAACTCTCTTCCATTTGCCACAGCAGAATGGAGGATGTCATTCCAGAGGATTCTCCCGTTAGGCTTGTTGCATTTAACCTAGGCTACCTACCTGGTGGTAACAAAGCAATTACTACAAAGTCAGAAACAACATTACAAGCACTTAAAGCTGCCAATAGAATTCTGAAACCTGGAGGGCTTATCAGCCTTGTGGTTTATGTGGGGCATCCTGGTGGACTGGAAGAATTGGAGACTATTGAAAAATTTTCTGGTGATCTGGCTGTTGAGAATTGGATTTGTTGTAAGCTTCAGATGTTAAACCGGCCATTAGCTCCAGTGCCTGTGTTTTTATTCAAGAGATGAAAGTGTTGAGAGCAAGTATCCAAAAGTTCTGCCAGATTCGAGTAGTTTGAAGTTTTTGTTCTATCGGATTGGTCGTTGCATCCTGCTGAGACTATCGTTGGAGTTTGCTTGCAGCCTGTGTTGTGGAGCAAATAATTGTCTTAAGGACAACGCTTTGAAGCGTGTCTCAACTATCATTTGAATCTCCATAAGTTTTTGAGGTTTTTCTGGGTATTTCAATTTATAGGCCTTGTCATACAATCTAGCTTATTTTTGTGTTTGAACATTATTATTGTATACAGTGTGTATTGTAATTACTGTATCCAGTTGAGTGGTAAACAATTTGCTAGTGTTATTCAGTTTCTATATATAGTTTCCCCCAACATAACCAAATAAGAAGCTCCATGTAGTGGAGGCCTAGTATATAACCTCATCAAGTGACCAAGTTATGTCACCTTGGCTTGGATAGGAAGATTTCCACACCAAGACATATCCTCTACTTAGATCAAGTCAAATCCTATGATGTTTCGATTTGGATTTATTGGCTAGATCATATGACATAGCTATTGCTATATTCTAAACAACTATCTTGATGAGATTCATAGTAGTTTTGTTCAACTACAAGCATTATTCATAAGCCCTTCCATTCCATAATCGGTACTCATGATATGTCTCATCTTTAACTATCATGACTCTATTTCATATATAGATTTAGCCACAATTCAATTCTTAAGTCTATAAATTGAAACTTTCACAGCTAGTGATTGTAGACCCTTGTCTATTTGCCACCCAAGCACTTGGTTGAGCATTGGAGTAACTTCGATAATCATCATACAGATACCAGCAAGTTTTTTCATTCTCTTGAAAAGCCACCAAGTTTAGAGCAGGAGAAAGAGCTTGATGAATATGACTTGGGTCTTGTTGGTTTTGGTAACTGTCCTGTTGCAATTGAGGCAAAGCATTGATAAACTAGGCAAAACATGTGTAAAGAGGCTTGTAGCAATAGAGTTCCTATCACTAAATTTATTGTTTAATCTGAGCAATGAAAGTTTATTGATTTATGCTGTGAGTTATAACTTGTAAGAATTCTTTTTGCATTGGATATTTTGTTCAGATAATTGATGAAGTTGGTTTGAGAAGGCATTTATGGGACAATGCTTCTGGTTCACTTGCTATGGCCTCTTTTGGTAACCCTGTCGGCATTGGATTAATTTCATATCAATATCGTAATGTTACTTCATTACCACAATATAATGAACTATCTAAGGGAACTATCAAAAGGAGTACTATCAATTTTATATTATGTTGTATTACCACTTATTTCGAGTACAATCAATTTTATGTTATGTTGTACTACCACTTTTATGTTGAT ATGTTGTCTTTGAAATTTGGGTCAAAATTAGTGGCGGTTGCTGCCTTCCCACCAGTCTTAGGACGTCAAAGACACTTGAGAAATCTTTGCTGCTGTTCTAACCGTTTTCAGTCGAATGGTTTATCTTCTGAATGTCAGATTGATTTCAATTCACCATTGCCGTCGAGAGATTCTTCGTCTTTGGAAGGTTACATTTCAACTTTGTTGTATTTATGTCTGCAAAATTTGATGCTAGATTACCATTTACAAACGACTCGAGGATGTCATGGTCGGCTATTTTTTTGGGAAGAAGAGAGCTACAGAAGTTGCTCACTCATATTAATTACTTGTCCTTTATCCATCAGTGTATGGAAACGTGTCGTCAGAAAAGGGGATACAGTGGTAGATGCTACTTGTGGAAACGGGTATGATACACTGGCTATGGTCAAAATGGTTGCAGATGAATCTGGTTCTGGGCATGTTTATGCAATGGACGTTCAGAAAGAGGCTTTAGAAAGTACTTCTGTGTTGCTGGACGAGTCACTCAGTGAAAAAGAGAAGAAACTTGTTAAACTCTCTTCCATTTGCCACAGCAGAATGGAGGATGTCATTCCAGAGGATTCTCCCGTTAGGCTTGTTGCATTTAACCTAGGCTACCTACCTGGTGGTAACAAAGCAATTACTACAAAGTCAGAAACAACATTACAAGCACTTAAAGCTGCCAATAGAATTCTGAAACCTGGAGGGCTTATCAGCCTTGTGGTTTATGTGGGGCATCCTGGTGGACTGGAAGAATTGGAGACTATTGAAAAATTTTCTGGTGATCTGGCTGTTGAGAATTGGATTTGTTGTAAGCTTCAGATGTTAAACCGGCCATTAGCTCCAGTGCCTGTGTTTTTATTCAAGAGATGA MLSLKFGSKLVAVAAFPPVLGRQRHLRNLCCCSNRFQSNGLSSECQIDFNSPLPSRDSSSLEGYISTLLYLCLQNLMLDYHLQTTRGCHGRLFFWEEESYRSCSLILITCPLSISVWKRVVRKGDTVVDATCGNGYDTLAMVKMVADESGSGHVYAMDVQKEALESTSVLLDESLSEKEKKLVKLSSICHSRMEDVIPEDSPVRLVAFNLGYLPGGNKAITTKSETTLQALKAANRILKPGGLISLVVYVGHPGGLEELETIEKFSGDLAVENWICCKLQMLNRPLAPVPVFLFKR Homology
BLAST of Clc02G19690 vs. NCBI nr
Match: XP_038902806.1 (putative rRNA methylase YtqB isoform X1 [Benincasa hispida] >XP_038902807.1 putative rRNA methylase YtqB isoform X1 [Benincasa hispida] >XP_038902808.1 putative rRNA methylase YtqB isoform X1 [Benincasa hispida]) HSP 1 Score: 419.5 bits (1077), Expect = 2.5e-113 Identity = 224/296 (75.68%), Postives = 242/296 (81.76%), Query Frame = 0
BLAST of Clc02G19690 vs. NCBI nr
Match: XP_038902809.1 (putative rRNA methylase YtqB isoform X2 [Benincasa hispida]) HSP 1 Score: 412.9 bits (1060), Expect = 2.3e-111 Identity = 223/296 (75.34%), Postives = 241/296 (81.42%), Query Frame = 0
BLAST of Clc02G19690 vs. NCBI nr
Match: XP_004139901.1 (uncharacterized protein LOC101214958 isoform X1 [Cucumis sativus] >KGN46802.1 hypothetical protein Csa_020806 [Cucumis sativus]) HSP 1 Score: 412.9 bits (1060), Expect = 2.3e-111 Identity = 222/296 (75.00%), Postives = 239/296 (80.74%), Query Frame = 0
BLAST of Clc02G19690 vs. NCBI nr
Match: XP_011656977.1 (uncharacterized protein LOC101214958 isoform X2 [Cucumis sativus]) HSP 1 Score: 406.4 bits (1043), Expect = 2.2e-109 Identity = 221/296 (74.66%), Postives = 238/296 (80.41%), Query Frame = 0
BLAST of Clc02G19690 vs. NCBI nr
Match: KAG6570591.1 (hypothetical protein SDJN03_29506, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 401.0 bits (1029), Expect = 9.0e-108 Identity = 219/302 (72.52%), Postives = 236/302 (78.15%), Query Frame = 0
BLAST of Clc02G19690 vs. ExPASy Swiss-Prot
Match: O34614 (Putative rRNA methylase YtqB OS=Bacillus subtilis (strain 168) OX=224308 GN=ytqB PE=3 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 3.2e-23 Identity = 63/161 (39.13%), Postives = 95/161 (59.01%), Query Frame = 0
BLAST of Clc02G19690 vs. ExPASy TrEMBL
Match: A0A0A0KEF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G136560 PE=4 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 1.1e-111 Identity = 222/296 (75.00%), Postives = 239/296 (80.74%), Query Frame = 0
BLAST of Clc02G19690 vs. ExPASy TrEMBL
Match: A0A6J1J6K5 (uncharacterized protein LOC111483929 OS=Cucurbita maxima OX=3661 GN=LOC111483929 PE=4 SV=1) HSP 1 Score: 398.3 bits (1022), Expect = 2.8e-107 Identity = 217/298 (72.82%), Postives = 235/298 (78.86%), Query Frame = 0
BLAST of Clc02G19690 vs. ExPASy TrEMBL
Match: A0A6J1FUH7 (uncharacterized protein LOC111448248 OS=Cucurbita moschata OX=3662 GN=LOC111448248 PE=4 SV=1) HSP 1 Score: 396.0 bits (1016), Expect = 1.4e-106 Identity = 216/301 (71.76%), Postives = 233/301 (77.41%), Query Frame = 0
BLAST of Clc02G19690 vs. ExPASy TrEMBL
Match: A0A6J1D7G1 (uncharacterized protein LOC111017978 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017978 PE=4 SV=1) HSP 1 Score: 380.9 bits (977), Expect = 4.7e-102 Identity = 206/296 (69.59%), Postives = 228/296 (77.03%), Query Frame = 0
BLAST of Clc02G19690 vs. ExPASy TrEMBL
Match: A0A6J1D648 (uncharacterized protein LOC111017978 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111017978 PE=4 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 4.4e-100 Identity = 205/296 (69.26%), Postives = 227/296 (76.69%), Query Frame = 0
BLAST of Clc02G19690 vs. TAIR 10
Match: AT1G16445.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 263.1 bits (671), Expect = 2.7e-70 Identity = 125/183 (68.31%), Postives = 155/183 (84.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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