Clc02G18000 (gene) Watermelon (cordophanus) v2

Overview
NameClc02G18000
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionB3 domain-containing protein At2g31720-like
LocationClcChr02: 30541088 .. 30545678 (+)
RNA-Seq ExpressionClc02G18000
SyntenyClc02G18000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGAGAATTGGGTATCCGAAACGAATGGCGGGAGGTTTGCGAAAATCTGAAGTATCTCACAGCGGTAAAGAATAATCAGAAGAGAAAATTTTCCCAAATTGGAAACTGAATCTAGTGTTCGTCGAAATCTTATATTTGGATCGGCGATCGGATTCGCTTAAGAATCAAGCTAGATAAATCTTCACTTAAGATAATTACCCTCCTAACCTTTGACCGGATTTGAAAATTTTCTTATACTACTTCGATTCTTTATTCTAATATTTTTATTAATTTTTTTATAATTTTTTTCTCTCCCTTATTTTTACTAATGACAATTTTTTAATAAAATAAATATGTATTTAATATTTTATTGCATCCAATCCTTTTACATTCAAATTTTCGATTTAATTATTAATATTTTGTTAGAGTAAACCTCAACTTGTTGGTGGAGTGTGTTGCTCTATGTTCAATACACCAATTATAATAGTTAGTATTTCAACTATTTTAACTTACAACGTTAGTATTTCAAATTCCTATTTGTTACGGTGTTACTATATGTTACCGTTCTTACTATTTATTACTCATCCTCTATTTTCTTATTTGTTACATTGTTTACTATTTATTACCTATATTAAAATAGTTTTCACATTAAACATAGATTATTATAACCCATACTAAAATTGTATGAATCTCAAACACATTAATTATTATATCTCACAAATTTAATAGCCAACTCAACACTCCAAAATGTCCCTTAGTCCTGCAACTTTAATGAGTAACAATTTAGTTTATGCACTTTGCAATTTGTAATAATTTAGTCCTTATTATGAAAAATGTTATTCAAATATAATAAAATTTCTCACACGTGTAGATTGATAAATTGATCAGAAATCAATTTTTTCCTTTTTATAAACTATAAAGATCAAGTTGTTACATAACAAAGTTGACACTTAATTTTGAGGAGTTTTTCACAATAAAAACCGAATTGCTATAAATTTGCTATAAATTTCAAAATACAAAGATTAAAATTTTCGTTCACGAGGCGAGCGCCTTATCCATTAGGCCAGGCAAACCCATTTGGCTAGAGTTCTCAAAATAACTTTAATAATAGATTAAGGTTTAAAATCTTTATGATATTATATTTTCTGGCAAATTGTTGATGAATTAAAAATACATTTTACAACCAATATATATATATAGACTACCAAAAATAGGAAAAATAAATTAAACTAAAAATATTGAAGATGCAAAGTTTTAAATCCTATAATAACATGTTATAGTTCAATTAAGAGCCTGTCGAGTTCCCACACTATGAATTTTCTTTTAAAATTTTATATAAAATATGTTCGAATGCTTGCTTATAGCCAACTAAGAATGTCTCTAAAGATAAATTACCAATATAATAAGAAATGGTTAAAATATCAAAGTCCTTGTACTTTGGTATTTAATTTGGGTCTTACTTCATTTTAATTTGCATCATTTTCATTTTTAAACCTCCAAACTTAACTATTGCATTTTTTGTAGCACACTTGAAATTTTGTTTTTAGGTTACCATTTATTTTTTACGAGCTTGGTGAAATAATAATAATTATTTGCAATCGACAAAAATATATAACATGATCATGACTTCCACGAATATAGCGAACACTTTCACAAATATTTAATTTAGTCTTTTGAAAAAGAAAATAAACTATTGGAAGTAAAATGATTGAATTTATACTTTCGAACCACATAAAAAAAATATTTTTAATCCACAAATATTATATCTTAGAAATTTTAAAACTTTAATATTTATTAAAGCTGATCATCAATTAACTAACGAAAAATTTAGACCAATATTTGCTTATTTATTTTTATTGATTTAGAGTTGTGTGATTTTTGTTTGGAGGAAGAAAATTACATTTTTGGCCCTTGAATTTTAAGTACAATTTTCATTTAGTCTCTAAATTTCAAAATGTTCACACATTTATACTATATTTATTTTCTTTATAAGAAAATATGTTAATTTGAAAAATGGGTTCCATTTAATTACGTGCTTACTACCGTCTAATGAAATGCACAAATTCGTAATCAACTAACCTAATTGGATTGAGGAGAAGAGGGTCATCAATTAGATTATATTGATTATTACTCGAGACCACACCCTCTTTTTTCAAACTTTCCATCATTTACCATTTTTTTTTTTGTTATCTAGATCTATATCAATATTTGGTAACACGTATCAATATCCATAATCAGTATCAACATCATATTGGTAATTAGTATCAATAATCTATAACAAGAATCAATATTAATAATCTGTATCGATATCTATAATTATAAAGTTGGGTTTTTTTTCCTATTATTTTTGCTAGACATATTTATGGAAACGATACTTAGTGTTTTTTTCATTATTATTATTTTTGCTAGATATATTTATATAATGTAACGACCCAACTTTTCTAATTAATAGGACTTTTCTAAATCCAATTTACCTAATAATTAAACCAAATAATCTTACACAAAATGCAACTAAGTCCCAATATCTTCCCAACTTCAAACAATGGGTCTAACCTAAACAAATTAAAAAATGAAGGGTTAAAAATCTAATTTTTCAGCCAACAATAACATTCCAAAATATTGTTTACTCATCAAAATCAAAATCGCCTATTTAACCCACTTCAACTTGCTTCCGGTTCCAAAATTACTTCTAACAATTAAAACCAACACCACCCATGGGTAATCATGAAATTACAAGAAAACCCAATCATACTTATCGAAACAATCTGACCAACCTGACCACAAAATAGTCTAGGTCTGACCAACCTGACCAAATCTTGAAATTCCGCCATAATCCACGAAGAACGAATGACATCGACGAAGCTAAACAGAGAGAGAGCAATTCGACAACGAGTTGCAAACGACAGACCAAAGCTCACTGAAATCCAATATTGACTTAAATATATATCTATCTTATTAAGTAAATTACTAGTAGATTTTGTTTGAAATTTGTTTTTTTAATGTCTTTATAGGAAAATTATGCGTGTTTTGTTTCTTTAAAAATTATGATTTTTCTAAATTGAAAATTGGATTAGTGTATTATTTTTTAAGATTATGCTTTTTTTTTTTTTAATTTTAATTTAAGTATTAATAAAATTTAGTCATTATTGTTAAAAAAAAAATTATAATTTGATCTTTATAGTTTGGAGAGAATTAGAATTTAATGCCTATAGTTTGAAAAATGTTAGAATTTACTCCCTACTTTTAAAACTATTTACAAGAGTTTCATCAAACTATAGGGACTAAATTCTAATTTCAAAAAAACTCTAATTTCTTTTTCCAAATCATTAACTAAATTTGAAATTTAACTAAAAATATTTTTAAAAAAAAAACTAGATAATTAAAACATAATAAAGTTAGGAAACATAAAATTAACATCAACTAGGAAAAGGAAAAAACAAAAATAAAAAATATTTAAACACACCAGGCAATTTTTCAACTTCAACACTCAGAGGAAACTTAAACAAAAACACAAATGGGTGATAATCCAGAATCCATTAATAAAATGGGTGATAATCCAAAATCCATTAATAAAAAAAACAAAACCACGTCGTTTCTTTATGATGATTTAAAGGAATTTCTCGGCCAGAAAATTCAGAGGAAGAAGAGGTCTTTGATCCAATACATCGACTGCCCTGGCCACCCAGAAACACTACCCGCCACGACCAACAAATGGAGTTGACCTACAATCCCATTTATCCCCAGGGGCGGTGAATGGTGCCAACCCAGTTGCTAAAATGGCAAACAAAGATGACCTAGCTGGTATAATTGAAAACAGGGACAACCCAAATGCTGAAATGACGAACGGAGACGACCCAGAATTGGTAGAAACTCATTGGCGCTGGAAAACAGAGTCGATCTGAATGTTGCAGTGGCGAATGGAGATGACCCAGTTGGTAGAATCTCACCGGCGCCGGAAAGCATAGTCGACCCAGATGTTGCTGTGATGGCGAACAGCAACAACCCTGTTACTAAAATGGCAAATGAAGACGACCAAGCTGGCAGAACTTTGTCGACGTCGGAAAACAGGGACACCCCAAATGGTGAAGTGGCGAACAGAGATGACTCAGTTGGTAGAATCTCACCGGCACAGGAAAACATAGTCGACCCAAATGTTGCAATGGTAAACGGTGACAACTCCGTTGCTGGAATTCCACTAGCACCGAAAAACAGGGTGGATCCGAATGCAGAAATTGAAGCGATAGGGGAGGAGATGCCGACGGATATGAGAGAGTATATAATAGAAAGAATGGGGGGTTATAGGGTGCAAATGATAATCGAAAAAACAACGTCGACGGACATAAGGAAGGATCAGGGGCGGTTGTCGTTGCCGACGAAGAAGTTGAGAGCGCAATTTTTTACGGCGGAGGAGGAGAGGTATTTCATGGATCGAAGCGAGCCAAATAATGGATTGAATTACATTGACACAATCATTGTGGGATCAGATTTGAGAGAGAACCCAATGCAATTCAAGAAGTGGTTGCTTGGGACAAGATTTGTGGATTTTTTCATAAAAAATTGGAACTCTTTTTCCAGAACTTATGGACTCAAAGTTAGAAATAAGGTTTGA

mRNA sequence

ATGCAGAGAATTGGGTATCCGAAACGAATGGCGGGAGGTTTGCGAAAATCTGAAGTATCTCACAGCGGGGCGGTGAATGGTGCCAACCCAGTTGCTAAAATGGCAAACAAAGATGACCTAGCTGTGGCGAATGGAGATGACCCAGTTGGTAGAATCTCACCGGCGCCGGAAAGCATAGTCGACCCAGATGTTGCTGTGATGGCGAACAGCAACAACCCTGTTACTAAAATGGCAAATGAAGACGACCAAGCTGGCAGAACTTTGTCGACGTCGGAAAACAGGGACACCCCAAATGGTGAAGTGGCGAACAGAGATGACTCAGTTGGTAGAATCTCACCGGCACAGGAAAACATAGTCGACCCAAATGTTGCAATGGTAAACGGTGACAACTCCGTTGCTGGAATTCCACTAGCACCGAAAAACAGGGTGGATCCGAATGCAGAAATTGAAGCGATAGGGGAGGAGATGCCGACGGATATGAGAGAGTATATAATAGAAAGAATGGGGGGTTATAGGGTGCAAATGATAATCGAAAAAACAACGTCGACGGACATAAGGAAGGATCAGGGGCGGTTGTCGTTGCCGACGAAGAAGTTGAGAGCGCAATTTTTTACGGCGGAGGAGGAGAGGTATTTCATGGATCGAAGCGAGCCAAATAATGGATTGAATTACATTGACACAATCATTGTGGGATCAGATTTGAGAGAGAACCCAATGCAATTCAAGAAGTGGTTGCTTGGGACAAGATTTGTGGATTTTTTCATAAAAAATTGGAACTCTTTTTCCAGAACTTATGGACTCAAAGTTAGAAATAAGGTTTGA

Coding sequence (CDS)

ATGCAGAGAATTGGGTATCCGAAACGAATGGCGGGAGGTTTGCGAAAATCTGAAGTATCTCACAGCGGGGCGGTGAATGGTGCCAACCCAGTTGCTAAAATGGCAAACAAAGATGACCTAGCTGTGGCGAATGGAGATGACCCAGTTGGTAGAATCTCACCGGCGCCGGAAAGCATAGTCGACCCAGATGTTGCTGTGATGGCGAACAGCAACAACCCTGTTACTAAAATGGCAAATGAAGACGACCAAGCTGGCAGAACTTTGTCGACGTCGGAAAACAGGGACACCCCAAATGGTGAAGTGGCGAACAGAGATGACTCAGTTGGTAGAATCTCACCGGCACAGGAAAACATAGTCGACCCAAATGTTGCAATGGTAAACGGTGACAACTCCGTTGCTGGAATTCCACTAGCACCGAAAAACAGGGTGGATCCGAATGCAGAAATTGAAGCGATAGGGGAGGAGATGCCGACGGATATGAGAGAGTATATAATAGAAAGAATGGGGGGTTATAGGGTGCAAATGATAATCGAAAAAACAACGTCGACGGACATAAGGAAGGATCAGGGGCGGTTGTCGTTGCCGACGAAGAAGTTGAGAGCGCAATTTTTTACGGCGGAGGAGGAGAGGTATTTCATGGATCGAAGCGAGCCAAATAATGGATTGAATTACATTGACACAATCATTGTGGGATCAGATTTGAGAGAGAACCCAATGCAATTCAAGAAGTGGTTGCTTGGGACAAGATTTGTGGATTTTTTCATAAAAAATTGGAACTCTTTTTCCAGAACTTATGGACTCAAAGTTAGAAATAAGGTTTGA

Protein sequence

MQRIGYPKRMAGGLRKSEVSHSGAVNGANPVAKMANKDDLAVANGDDPVGRISPAPESIVDPDVAVMANSNNPVTKMANEDDQAGRTLSTSENRDTPNGEVANRDDSVGRISPAQENIVDPNVAMVNGDNSVAGIPLAPKNRVDPNAEIEAIGEEMPTDMREYIIERMGGYRVQMIIEKTTSTDIRKDQGRLSLPTKKLRAQFFTAEEERYFMDRSEPNNGLNYIDTIIVGSDLRENPMQFKKWLLGTRFVDFFIKNWNSFSRTYGLKVRNKV
Homology
[Close]
BLAST of Clc02G18000 vs. NCBI nr
Match: XP_022998957.1 (B3 domain-containing protein At2g31720-like [Cucurbita maxima])

HSP 1 Score: 181.8 bits (460), Expect = 8.0e-42
Identity = 94/169 (55.62%), Postives = 120/169 (71.01%), Query Frame = 0 

Query: 111 ISPAQENIVDPNV----AMVNGDNSVAGIPLAPKNRVDPNAEIE-AIGEEMPTDMREYII 170
           +SP   N VDP       +VNG++ +A IP  P N  DP+ EI+  + EEMP +MRE+I 
Sbjct: 44  MSPTPMNRVDPEAGNWSGVVNGNSPIAEIPPEPMNEDDPDEEIQPVVEEEMPAEMREHIT 103

Query: 171 ERMGGYRVQMIIE-KTTSTDIRKDQGRLSLPTKKLRAQFFTAEEERYFMDRSEPNNGLNY 230
           ERMGGYRVQMIIE K T+TD+R +QGRLSLP K +R +F TAEEE+    RS+ ++ LNY
Sbjct: 104 ERMGGYRVQMIIEKKLTATDMRTNQGRLSLPKKMVRVEFMTAEEEKMLEHRSKGDDELNY 163

Query: 231 IDTIIVGSDLRENPMQFKKWLLGTRFVDFFIKNWNSFSRTYGLKVRNKV 274
           IDT IVGSDLR NP++FKKWL+G  +V+  +  WNSF+R YGLK   KV
Sbjct: 164 IDTFIVGSDLRVNPIRFKKWLMGKNYVNCLVNKWNSFARAYGLKTGTKV 212

[Close]
BLAST of Clc02G18000 vs. NCBI nr
Match: XP_022946870.1 (B3 domain-containing protein At2g31720-like [Cucurbita moschata] >KAG7030330.1 B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 181.0 bits (458), Expect = 1.4e-41
Identity = 93/169 (55.03%), Postives = 119/169 (70.41%), Query Frame = 0 

Query: 111 ISPAQENIVDPNV----AMVNGDNSVAGIPLAPKNRVDPNAEIEAIG-EEMPTDMREYII 170
           +SP   N  DP       +VNGD+ +A IP  P N  DP+ EI+ +  EEMP +MRE+I 
Sbjct: 44  VSPTPMNRDDPEAGNLSGVVNGDSPIAEIPPEPMNEDDPDEEIQPVAEEEMPAEMREHIT 103

Query: 171 ERMGGYRVQMIIE-KTTSTDIRKDQGRLSLPTKKLRAQFFTAEEERYFMDRSEPNNGLNY 230
           ERMGGYRVQMIIE K T+TD+R +QGRLSLP K +R +F TAEEE+    RS+ ++ LNY
Sbjct: 104 ERMGGYRVQMIIEKKLTATDMRTNQGRLSLPKKMVRVEFMTAEEEKMLEHRSKGDDELNY 163

Query: 231 IDTIIVGSDLRENPMQFKKWLLGTRFVDFFIKNWNSFSRTYGLKVRNKV 274
           IDT IVGSDL+ NP++FKKWL+G  +V+  +  WNSF+R YGLK   KV
Sbjct: 164 IDTFIVGSDLKVNPIRFKKWLMGKNYVNCLVNKWNSFARAYGLKTGTKV 212

[Close]
BLAST of Clc02G18000 vs. NCBI nr
Match: KAG6599340.1 (B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 177.6 bits (449), Expect = 1.5e-40
Identity = 92/169 (54.44%), Postives = 118/169 (69.82%), Query Frame = 0 

Query: 111 ISPAQENIVDPNV----AMVNGDNSVAGIPLAPKNRVDPNAEIEAIG-EEMPTDMREYII 170
           +SP   N  DP       +VN D+ +A IP  P N  DP+ EI+ +  EEMP +MRE+I 
Sbjct: 44  VSPTPMNRDDPEAGNLSGVVNVDSPIAEIPPEPMNEDDPDEEIQPVAEEEMPAEMREHIT 103

Query: 171 ERMGGYRVQMIIE-KTTSTDIRKDQGRLSLPTKKLRAQFFTAEEERYFMDRSEPNNGLNY 230
           ERMGGYRVQMIIE K T+TD+R +QGRLSLP K +R +F TAEEE+    RS+ ++ LNY
Sbjct: 104 ERMGGYRVQMIIEKKLTATDMRTNQGRLSLPKKMVRVEFMTAEEEKMLEHRSKGDDELNY 163

Query: 231 IDTIIVGSDLRENPMQFKKWLLGTRFVDFFIKNWNSFSRTYGLKVRNKV 274
           IDT IVGSDL+ NP++FKKWL+G  +V+  +  WNSF+R YGLK   KV
Sbjct: 164 IDTFIVGSDLKVNPIRFKKWLMGKNYVNCLVNKWNSFARAYGLKTGTKV 212

[Close]
BLAST of Clc02G18000 vs. NCBI nr
Match: XP_023545398.1 (B3 domain-containing protein At2g31720-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 176.8 bits (447), Expect = 2.6e-40
Identity = 91/169 (53.85%), Postives = 118/169 (69.82%), Query Frame = 0 

Query: 111 ISPAQENIVDPNV----AMVNGDNSVAGIPLAPKNRVDPNAEIEAIG-EEMPTDMREYII 170
           +SP   N VDP       +VNG++ +A  P  P N  DP+ EI+ +  EEMP +MR++I 
Sbjct: 44  MSPTPMNRVDPEAENRSGVVNGNSPIAENPPEPMNEDDPDEEIQPVAEEEMPAEMRDHIT 103

Query: 171 ERMGGYRVQMIIE-KTTSTDIRKDQGRLSLPTKKLRAQFFTAEEERYFMDRSEPNNGLNY 230
           ERMGGYRVQMIIE K T+TD+R +QGRLSLP K +R +F TAEEE+    RS+  + LNY
Sbjct: 104 ERMGGYRVQMIIEKKLTATDMRTNQGRLSLPKKMVRVEFMTAEEEKMLEHRSKGEDELNY 163

Query: 231 IDTIIVGSDLRENPMQFKKWLLGTRFVDFFIKNWNSFSRTYGLKVRNKV 274
           IDT IVGSDL+ NP++FKKWL+G  +V+  +  WNSF+R YGLK   KV
Sbjct: 164 IDTFIVGSDLKVNPIRFKKWLMGKNYVNCLVNKWNSFARAYGLKTGTKV 212

[Close]
BLAST of Clc02G18000 vs. NCBI nr
Match: XP_016899957.1 (PREDICTED: B3 domain-containing protein At1g05920-like [Cucumis melo] >KAA0065186.1 B3 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 94.0 bits (232), Expect = 2.2e-15
Identity = 63/172 (36.63%), Postives = 90/172 (52.33%), Query Frame = 0 

Query: 110 RISPAQENIVDPNVAMVNGDNSVAGIPLAPKNRVDPNAEIEAIGE---EMPTDMREYIIE 169
           R+S +   + +  + M NGDN         + R  P  E    G+   EMP  MRE+I+ 
Sbjct: 28  RVSSSLLEVAEAMIEMANGDN---------RERKKPRREEMESGQSSSEMPAAMREWIV- 87

Query: 170 RMGGYRVQMIIE-KTTSTDIRKDQGRLSLPTKKLRAQFFTAEEERYFMDRSEPNNG---- 229
           R GGY +Q++IE K   +D+ ++ GRL LPT KL+ + F  E+ER  +D  E N G    
Sbjct: 88  RNGGYEIQLVIEKKLEESDVSRNHGRLCLPTMKLKGE-FAREDERRILD--EENGGKKKK 147

Query: 230 -----LNYIDTIIVGSDLRENPMQFKKWLLGTRFVDFFIKNWNSFSRTYGLK 269
                 N ++  I+  DLRE+ M  KKW +G+      +KNWNSF    GLK
Sbjct: 148 MMMKKKNGLEVGIMDVDLRESSMSLKKWKIGSDRCYCLVKNWNSFVEENGLK 186

[Close]
BLAST of Clc02G18000 vs. ExPASy Swiss-Prot
Match: Q9XIP5 (Putative B3 domain-containing protein At2g27410 OS=Arabidopsis thaliana OX=3702 GN=At2g27410 PE=3 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 5.2e-04
Identity = 27/122 (22.13%), Postives = 56/122 (45.90%), Query Frame = 0 

Query: 140 KNRVDPNAEIEAIGEEMPTDMREYIIERMGGYRVQMI-IEKTTSTDIRKDQGRLSLPTKK 199
           K ++    E E I    P  +   +     GY  ++I   +   TD++K + RLS+P K+
Sbjct: 53  KRKIICPLEEEPIQTTPPEWLLNVMRREENGYNPKLISTRQLYKTDLKKTEARLSVPFKQ 112

Query: 200 LRAQFFTAEEERYFMDRSEPNNGLNYIDTIIVGSDLRENPMQFKKWLLGTRFVDFFIKNW 259
           ++   F  E+E   +  +      N +    V  +L ++ ++ +KW +   ++  F+K W
Sbjct: 113 VKTPDFLTEDETRIIHENAMKIRDNGVPVNFVDPELNKHVLELRKWKMKGNWIYVFVKGW 172

Query: 260 NS 261
            +
Sbjct: 173 KN 174

[Close]
BLAST of Clc02G18000 vs. ExPASy TrEMBL
Match: A0A6J1K9G9 (B3 domain-containing protein At2g31720-like OS=Cucurbita maxima OX=3661 GN=LOC111493483 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.9e-42
Identity = 94/169 (55.62%), Postives = 120/169 (71.01%), Query Frame = 0 

Query: 111 ISPAQENIVDPNV----AMVNGDNSVAGIPLAPKNRVDPNAEIE-AIGEEMPTDMREYII 170
           +SP   N VDP       +VNG++ +A IP  P N  DP+ EI+  + EEMP +MRE+I 
Sbjct: 44  MSPTPMNRVDPEAGNWSGVVNGNSPIAEIPPEPMNEDDPDEEIQPVVEEEMPAEMREHIT 103

Query: 171 ERMGGYRVQMIIE-KTTSTDIRKDQGRLSLPTKKLRAQFFTAEEERYFMDRSEPNNGLNY 230
           ERMGGYRVQMIIE K T+TD+R +QGRLSLP K +R +F TAEEE+    RS+ ++ LNY
Sbjct: 104 ERMGGYRVQMIIEKKLTATDMRTNQGRLSLPKKMVRVEFMTAEEEKMLEHRSKGDDELNY 163

Query: 231 IDTIIVGSDLRENPMQFKKWLLGTRFVDFFIKNWNSFSRTYGLKVRNKV 274
           IDT IVGSDLR NP++FKKWL+G  +V+  +  WNSF+R YGLK   KV
Sbjct: 164 IDTFIVGSDLRVNPIRFKKWLMGKNYVNCLVNKWNSFARAYGLKTGTKV 212

[Close]
BLAST of Clc02G18000 vs. ExPASy TrEMBL
Match: A0A6J1G587 (B3 domain-containing protein At2g31720-like OS=Cucurbita moschata OX=3662 GN=LOC111450806 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 6.6e-42
Identity = 93/169 (55.03%), Postives = 119/169 (70.41%), Query Frame = 0 

Query: 111 ISPAQENIVDPNV----AMVNGDNSVAGIPLAPKNRVDPNAEIEAIG-EEMPTDMREYII 170
           +SP   N  DP       +VNGD+ +A IP  P N  DP+ EI+ +  EEMP +MRE+I 
Sbjct: 44  VSPTPMNRDDPEAGNLSGVVNGDSPIAEIPPEPMNEDDPDEEIQPVAEEEMPAEMREHIT 103

Query: 171 ERMGGYRVQMIIE-KTTSTDIRKDQGRLSLPTKKLRAQFFTAEEERYFMDRSEPNNGLNY 230
           ERMGGYRVQMIIE K T+TD+R +QGRLSLP K +R +F TAEEE+    RS+ ++ LNY
Sbjct: 104 ERMGGYRVQMIIEKKLTATDMRTNQGRLSLPKKMVRVEFMTAEEEKMLEHRSKGDDELNY 163

Query: 231 IDTIIVGSDLRENPMQFKKWLLGTRFVDFFIKNWNSFSRTYGLKVRNKV 274
           IDT IVGSDL+ NP++FKKWL+G  +V+  +  WNSF+R YGLK   KV
Sbjct: 164 IDTFIVGSDLKVNPIRFKKWLMGKNYVNCLVNKWNSFARAYGLKTGTKV 212

[Close]
BLAST of Clc02G18000 vs. ExPASy TrEMBL
Match: A0A5A7VFT2 (B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005230 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.1e-15
Identity = 63/172 (36.63%), Postives = 90/172 (52.33%), Query Frame = 0 

Query: 110 RISPAQENIVDPNVAMVNGDNSVAGIPLAPKNRVDPNAEIEAIGE---EMPTDMREYIIE 169
           R+S +   + +  + M NGDN         + R  P  E    G+   EMP  MRE+I+ 
Sbjct: 28  RVSSSLLEVAEAMIEMANGDN---------RERKKPRREEMESGQSSSEMPAAMREWIV- 87

Query: 170 RMGGYRVQMIIE-KTTSTDIRKDQGRLSLPTKKLRAQFFTAEEERYFMDRSEPNNG---- 229
           R GGY +Q++IE K   +D+ ++ GRL LPT KL+ + F  E+ER  +D  E N G    
Sbjct: 88  RNGGYEIQLVIEKKLEESDVSRNHGRLCLPTMKLKGE-FAREDERRILD--EENGGKKKK 147

Query: 230 -----LNYIDTIIVGSDLRENPMQFKKWLLGTRFVDFFIKNWNSFSRTYGLK 269
                 N ++  I+  DLRE+ M  KKW +G+      +KNWNSF    GLK
Sbjct: 148 MMMKKKNGLEVGIMDVDLRESSMSLKKWKIGSDRCYCLVKNWNSFVEENGLK 186

[Close]
BLAST of Clc02G18000 vs. ExPASy TrEMBL
Match: A0A1S4DVE5 (B3 domain-containing protein At1g05920-like OS=Cucumis melo OX=3656 GN=LOC107990711 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.1e-15
Identity = 63/172 (36.63%), Postives = 90/172 (52.33%), Query Frame = 0 

Query: 110 RISPAQENIVDPNVAMVNGDNSVAGIPLAPKNRVDPNAEIEAIGE---EMPTDMREYIIE 169
           R+S +   + +  + M NGDN         + R  P  E    G+   EMP  MRE+I+ 
Sbjct: 28  RVSSSLLEVAEAMIEMANGDN---------RERKKPRREEMESGQSSSEMPAAMREWIV- 87

Query: 170 RMGGYRVQMIIE-KTTSTDIRKDQGRLSLPTKKLRAQFFTAEEERYFMDRSEPNNG---- 229
           R GGY +Q++IE K   +D+ ++ GRL LPT KL+ + F  E+ER  +D  E N G    
Sbjct: 88  RNGGYEIQLVIEKKLEESDVSRNHGRLCLPTMKLKGE-FAREDERRILD--EENGGKKKK 147

Query: 230 -----LNYIDTIIVGSDLRENPMQFKKWLLGTRFVDFFIKNWNSFSRTYGLK 269
                 N ++  I+  DLRE+ M  KKW +G+      +KNWNSF    GLK
Sbjct: 148 MMMKKKNGLEVGIMDVDLRESSMSLKKWKIGSDRCYCLVKNWNSFVEENGLK 186

[Close]
BLAST of Clc02G18000 vs. ExPASy TrEMBL
Match: A0A6J1CX35 (putative B3 domain-containing protein At2g27410 OS=Momordica charantia OX=3673 GN=LOC111015593 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.0e-14
Identity = 47/115 (40.87%), Postives = 69/115 (60.00%), Query Frame = 0 

Query: 155 EMPTDMREYIIERMGGYRVQMIIEK-TTSTDIRKDQGRLSLPTKKLRAQFFTAEEERYFM 214
           EMP  MR+ I+E +GGY +Q++I+K   +TD+ K+ GRLSLP KKLR   F  EEER  +
Sbjct: 121 EMPAAMRDRIVE-IGGYGIQLVIQKQLQNTDMNKNHGRLSLPAKKLRIHDFVTEEERKLL 180

Query: 215 DRSEPNNGLNYIDTIIVGSDLRENPMQFKKWLLGTRFVDFFIKNWNSFSRTYGLK 269
           ++   NN    +D  I+  DL+E  +  KKW +G+  +   +  WNSF     L+
Sbjct: 181 NQHSNNNNKKGMDVPIIDPDLKERRICLKKWKIGSGDLYCLMTQWNSFVEETALR 234

[Close]
BLAST of Clc02G18000 vs. TAIR 10
Match: AT2G27410.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 46.6 bits (109), Expect = 3.7e-05
Identity = 27/122 (22.13%), Postives = 56/122 (45.90%), Query Frame = 0 

Query: 140 KNRVDPNAEIEAIGEEMPTDMREYIIERMGGYRVQMI-IEKTTSTDIRKDQGRLSLPTKK 199
           K ++    E E I    P  +   +     GY  ++I   +   TD++K + RLS+P K+
Sbjct: 53  KRKIICPLEEEPIQTTPPEWLLNVMRREENGYNPKLISTRQLYKTDLKKTEARLSVPFKQ 112

Query: 200 LRAQFFTAEEERYFMDRSEPNNGLNYIDTIIVGSDLRENPMQFKKWLLGTRFVDFFIKNW 259
           ++   F  E+E   +  +      N +    V  +L ++ ++ +KW +   ++  F+K W
Sbjct: 113 VKTPDFLTEDETRIIHENAMKIRDNGVPVNFVDPELNKHVLELRKWKMKGNWIYVFVKGW 172

Query: 260 NS 261
            +
Sbjct: 173 KN 174

[Close]
BLAST of Clc02G18000 vs. TAIR 10
Match: AT2G31420.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 44.7 bits (104), Expect = 1.4e-04
Identity = 26/99 (26.26%), Postives = 48/99 (48.48%), Query Frame = 0 

Query: 164 IIERMGGYRVQMIIEKTT--STDIRKDQGRLSLPTKKLRAQFFTAEEERYFMDRSEPNNG 223
           ++ +  GY  ++II++    +TD+RK+QG LS+   KL    F  E+E  F+D       
Sbjct: 67  VMRKENGYDPKLIIKRRVLCTTDLRKNQGCLSMHLSKLEKSDFLTEDETRFLDEDFLKAK 126

Query: 224 LNYIDTIIVGSDLRENPMQFKKWLLGTRFVDFFIKNWNS 261
            + +   +V  +  ++ +  KKW   T +       WN+
Sbjct: 127 RDGLKVFLVDPESDKHVVYLKKWNGNTVWKYVLSHGWNN 165

The following BLAST results are available for this feature:
BLAST of Clc02G18000 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022998957.18.0e-4255.62B3 domain-containing protein At2g31720-like [Cucurbita maxima][more]
XP_022946870.11.4e-4155.03B3 domain-containing protein At2g31720-like [Cucurbita moschata] >KAG7030330.1 B... [more]
KAG6599340.11.5e-4054.44B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023545398.12.6e-4053.85B3 domain-containing protein At2g31720-like [Cucurbita pepo subsp. pepo][more]
XP_016899957.12.2e-1536.63PREDICTED: B3 domain-containing protein At1g05920-like [Cucumis melo] >KAA006518... [more]
BLAST of Clc02G18000 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9XIP55.2e-0422.13Putative B3 domain-containing protein At2g27410 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of Clc02G18000 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1K9G93.9e-4255.62B3 domain-containing protein At2g31720-like OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1G5876.6e-4255.03B3 domain-containing protein At2g31720-like OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A5A7VFT21.1e-1536.63B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
A0A1S4DVE51.1e-1536.63B3 domain-containing protein At1g05920-like OS=Cucumis melo OX=3656 GN=LOC107990... [more]
A0A6J1CX352.0e-1440.87putative B3 domain-containing protein At2g27410 OS=Momordica charantia OX=3673 G... [more]
BLAST of Clc02G18000 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G27410.13.7e-0522.13Domain of unknown function (DUF313) [more]
AT2G31420.11.4e-0426.26Domain of unknown function (DUF313) [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005508B3 domain-containing protein At2g31720-likePFAMPF03754DUF313coord: 163..260
e-value: 3.9E-11
score: 43.1
IPR005508B3 domain-containing protein At2g31720-likePANTHERPTHR31541B3 DOMAIN PLANT PROTEIN-RELATEDcoord: 96..273
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..97
NoneNo IPR availablePANTHERPTHR31541:SF25DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATEDcoord: 96..273

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc02G18000.1Clc02G18000.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding