Clc02G17980 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G17980
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	ASCH domain-containing protein
Location	ClcChr02: 30537929 .. 30541297 (-)
RNA-Seq Expression	Clc02G17980
Synteny	Clc02G17980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTAGGAGGGTAATTATCTTAAGTGAAGATTTATCTAGCTTGATTCTTAAGCGAATCCGATCGCCGATCCAAATATAAGATTTCGACGAACACTAGATTCAGTTTCCAATTTGGGAAAATTTTCTCTTCTGATTATTCTTTACCGCTGTGAGATACTTCAGATTTTCGCAAACCTCCCGCCATTCGTTTCGGATACCCAATTCTCTGCATCACTTGGCGTGAAGAAATTCTAGGGCACGATTTGTTTGCAACTTAGAGACGATGAAAGGAAGAAATTCTGGGAATTTGTCAAACCCATGTTTGACGATGCATCAGCCATGGGCTTCTCTGCTTGTATATGGAATCAAACGCATCGAGGGCAGGTCTTGGCCTGCTCCCCTCAGAGGTTCGTTCTTCTCGAAATCCCATGTCCCTTCAAATCTGCTTTTTGGCGCGAGGCTCTGTTTAATTTGTTTGAATGTTCGAGTAACATAAGAGGATGTTAGAATTGGGAAATGGTGCGATTGTAGTTACTTCACTGTTTGCCCTTTGTTTGATTTTGAATCAGATGCTTGTATCTTCCAACCCTAAAATCCAATCGGTTGGGAATTAGCGCGTTTTTTGTCTCTGATTTTCTGTTTCTGAAAACCATGCTTACTGATATTTTTATTGGGGTTTGTTAAATAAATATAATTTCTCCCTTTGACATTCTTGGCCAGAATTTTGAAGCTAACTAGTTATTAAAACTTGGTATTATTTTAGAAATTTGACTTGGATTTCTAGAGCTTTTATAGAGTGAACAACTAGAAGACATTATAAGAGAAGGGTTTTTGAGAAATATTGTCAGGTTACTAACTCCCCCATATGCGTTTCACATCTTGTTTCTGATTTAGGCGAATTGCTGATGGAATCATGCAAGTTTGTACGCTATAATAGATGGTGCTATGGTGAATAATAAGGATTTTGAAACTAAAATAATAGACGAAATAATGCTTACAGTTACAATGGCTGAATGCCCGCGATCACCAAAAAAAAAAAAAAAAAATGGACATTGTTGGACATTCAATGTTAGTGGGTGTGTGTGTGTGTCTTATTTTGGTTCTTTTGTTTATTTTTTGTATTGGTGTATCTTTTGTTAGTTTCGTGGCCTTCCTTTGTGGATATGATTTAGTAAGGATCATTCTAAATTCTGAATTTGATCTCTGAAGGCCGTCTTTGGATTCATGCTGCGAGTAAGGTTCCTGAGGCTTCTACAATCAAAGCAATGGAGGACTTCTATAGAGAACTTTATGCTTTGGATGGAATTACTGATCTTAAGTTTCCAGAACATTATCCTGTTTCAAGGCTTTTAGGTATTTAAATCTGATGATTTTTCATGATAACTTATGTTAAAAACTGATTCTTGTGTTTTTTTGGCGCTCTTTTCTGACTCTATTCCAATATTTCAGCAACTGAACTATCTGGTTCCATGTAGTTTATTGTTTGGAGTTGATCATTAAAGTGACACCATCATAATTTCTTAAATTTTTGTTCATTCAGGGTGTGTTGAAGTGGTTGGCTGTGTTCGTGGTGAAGAACTGAAAAGTTGGGATAAAGTACCTGACGGGGTGGGTAGCGTAGTTTTCCTTTTCCATACTTCAGTTTCTGAGATACCTTTTTTTAAAAAAGCTAACAAAAGCATACCTATTTTATTTGAACACAGGTTAGACTAGAAGCTCAAACTGATTTCTGCTGGCTCTGTGAACAACCACAGGTATGTACTGATTTGAACATGATATCAAATTTCCGAGTAATAGTTTACTGAATTGCGGTTCTTTTAATTGTTTCAGAAATTGCTGATTCCATTCGAGATGCGCGGTTACCAGGGTGTTTATAACTTAGAAAAGAGGGTAGGAATGTTAACTTTGTATTGATTCTCTTTTTAATGCTTATTTTGTGTGTTTCCATATGTTCTAAAATTGAATTGCATTTGGTCAGATATTTGAAGCAGCAGTTAGAGGTCTCACCCGTGTAAAATGCATACTGCCTGTAAAGTTTCAACTTCCAGATCCTAGAGATCCATTCTCCTTGGAGCCAGGATCTGTCTCTTCATGTTCTCCCAAGACTAAAGGATCTGGATCTGAAGTGGAGAAGTCATCTAAACTCAATGCTGTGATAGCTGGTGCTCGAGCAGCCGCAACTCAGTTTACCAGAAAGTACCAGGACCCCCAAACTTCTGTCCATGACCATACTTCGTCTAATTTTGGAACGGCAGGTAAATCCAAAACTGAATTCTTGGGAGGAGATCAATTTCAATCTTCCAACTTCCATCAAGACGAGGTTTCACGAGCAAATATTGAGGAACAAACTAGTAGCTACCACACTCGATCTCAGGCACTTATTGCACACCCTCATCAGCAAAATGGAGCTCCTTCTAAGGTATGGATTTTTTTCCTTAAAAAAGTTATTATTTTTAAAATGAAGAGGAGCTGTGAACAAAAAAATGACCGTAATTAGGTACTTCATTTTCAAAGATGGTACAAATTGATTTATACTTGGAAAAAAGAAAAAAGGTTCCCCTTGGACTTCTGTTTAACGATTAACATACTTTTATGCGAAGTTTTAGGACGAAAGCAAAATTTGAGGAACTACGAAATAAAAACATCTGAGAGTTTAGGGCCATAATAGGATTTAAATCATGGATATTCCAATCATACTAATGAAAAGATGATTAATTACTGTGTATTAGTAGATATTATTATTAGCCACAATTGCAAATAAATGCAGAAGTTATATTCTTACAGCATGTTCTTAAATCTATAGTCAATTGCAATAGTTTGCAACTAAATTTAGACTAATCTTGAATAGTTCATTGCTTCTTCCACCTCCAACCTGGGTATCTTTATTGAACTGATTAAAACAACCTGATGCTTTCATCTGTTTGCAAAATTGCTACTGTGCTGTACGACTCTTGTCCTATTAACAAAAGTCATTTCAAACTCATTCTAAGATGTTTTGTATTCTTATTTGTGATGCGATTATCAATTGCTACCCGGAATTAATGAGTGGTCTCATGTCGTGTTCAGATCTTTGCCGCTGCATTGAGAGGACTGAGACCGACATGAATGTTGATCGATTCAACTGCAGAGAGGATTTGTACATAGAAAAGCAGCGTGTATGTGAAGAGTGACTTTGGTTATAACTGGTGTTTATAATTCATCCATAAGTCTACAATGACAGATGCATCTCCTTGAAGAAGGGATGCTTTTACAGTTTAGTTAGTATTCTTTGTTGTTCTTATTAATTGCTTGGCCATGGAGTTGTAATTATTCATGATGTAATATAGAATGATTTGGTATTAGTAGAGCTTGATTTACAGTTCATGTAACATTTTGTCTCATATTAAGGTTA

mRNA sequence

GTTAGGAGGGTAATTATCTTAAGTGAAGATTTATCTAGCTTGATTCTTAAGCGAATCCGATCGCCGATCCAAATATAAGATTTCGACGAACACTAGATTCAGTTTCCAATTTGGGAAAATTTTCTCTTCTGATTATTCTTTACCGCTGTGAGATACTTCAGATTTTCGCAAACCTCCCGCCATTCGTTTCGGATACCCAATTCTCTGCATCACTTGGCGTGAAGAAATTCTAGGGCACGATTTGTTTGCAACTTAGAGACGATGAAAGGAAGAAATTCTGGGAATTTGTCAAACCCATGTTTGACGATGCATCAGCCATGGGCTTCTCTGCTTGTATATGGAATCAAACGCATCGAGGGCAGGTCTTGGCCTGCTCCCCTCAGAGGCCGTCTTTGGATTCATGCTGCGAGTAAGGTTCCTGAGGCTTCTACAATCAAAGCAATGGAGGACTTCTATAGAGAACTTTATGCTTTGGATGGAATTACTGATCTTAAGTTTCCAGAACATTATCCTGTTTCAAGGCTTTTAGGGTGTGTTGAAGTGGTTGGCTGTGTTCGTGGTGAAGAACTGAAAAGTTGGGATAAAGTACCTGACGGGGTTAGACTAGAAGCTCAAACTGATTTCTGCTGGCTCTGTGAACAACCACAGAAATTGCTGATTCCATTCGAGATGCGCGGTTACCAGGGTGTTTATAACTTAGAAAAGAGGATATTTGAAGCAGCAGTTAGAGGTCTCACCCGTGTAAAATGCATACTGCCTGTAAAGTTTCAACTTCCAGATCCTAGAGATCCATTCTCCTTGGAGCCAGGATCTGTCTCTTCATGTTCTCCCAAGACTAAAGGATCTGGATCTGAAGTGGAGAAGTCATCTAAACTCAATGCTGTGATAGCTGGTGCTCGAGCAGCCGCAACTCAGTTTACCAGAAAGTACCAGGACCCCCAAACTTCTGTCCATGACCATACTTCGTCTAATTTTGGAACGGCAGGTAAATCCAAAACTGAATTCTTGGGAGGAGATCAATTTCAATCTTCCAACTTCCATCAAGACGAGGTTTCACGAGCAAATATTGAGGAACAAACTAGTAGCTACCACACTCGATCTCAGGCACTTATTGCACACCCTCATCAGCAAAATGGAGCTCCTTCTAAGGTATGGATTTTTTTCCTTAAAAAAGTTATTATTTTTAAAATGAAGAGGAGCTGTGAACAAAAAAATGACCATCTTTGCCGCTGCATTGAGAGGACTGAGACCGACATGAATGTTGATCGATTCAACTGCAGAGAGGATTTGTACATAGAAAAGCAGCGTGTATGTGAAGAGTGACTTTGGTTATAACTGGTGTTTATAATTCATCCATAAGTCTACAATGACAGATGCATCTCCTTGAAGAAGGGATGCTTTTACAGTTTAGTTAGTATTCTTTGTTGTTCTTATTAATTGCTTGGCCATGGAGTTGTAATTATTCATGATGTAATATAGAATGATTTGGTATTAGTAGAGCTTGATTTACAGTTCATGTAACATTTTGTCTCATATTAAGGTTA

Coding sequence (CDS)

ATGAAAGGAAGAAATTCTGGGAATTTGTCAAACCCATGTTTGACGATGCATCAGCCATGGGCTTCTCTGCTTGTATATGGAATCAAACGCATCGAGGGCAGGTCTTGGCCTGCTCCCCTCAGAGGCCGTCTTTGGATTCATGCTGCGAGTAAGGTTCCTGAGGCTTCTACAATCAAAGCAATGGAGGACTTCTATAGAGAACTTTATGCTTTGGATGGAATTACTGATCTTAAGTTTCCAGAACATTATCCTGTTTCAAGGCTTTTAGGGTGTGTTGAAGTGGTTGGCTGTGTTCGTGGTGAAGAACTGAAAAGTTGGGATAAAGTACCTGACGGGGTTAGACTAGAAGCTCAAACTGATTTCTGCTGGCTCTGTGAACAACCACAGAAATTGCTGATTCCATTCGAGATGCGCGGTTACCAGGGTGTTTATAACTTAGAAAAGAGGATATTTGAAGCAGCAGTTAGAGGTCTCACCCGTGTAAAATGCATACTGCCTGTAAAGTTTCAACTTCCAGATCCTAGAGATCCATTCTCCTTGGAGCCAGGATCTGTCTCTTCATGTTCTCCCAAGACTAAAGGATCTGGATCTGAAGTGGAGAAGTCATCTAAACTCAATGCTGTGATAGCTGGTGCTCGAGCAGCCGCAACTCAGTTTACCAGAAAGTACCAGGACCCCCAAACTTCTGTCCATGACCATACTTCGTCTAATTTTGGAACGGCAGGTAAATCCAAAACTGAATTCTTGGGAGGAGATCAATTTCAATCTTCCAACTTCCATCAAGACGAGGTTTCACGAGCAAATATTGAGGAACAAACTAGTAGCTACCACACTCGATCTCAGGCACTTATTGCACACCCTCATCAGCAAAATGGAGCTCCTTCTAAGGTATGGATTTTTTTCCTTAAAAAAGTTATTATTTTTAAAATGAAGAGGAGCTGTGAACAAAAAAATGACCATCTTTGCCGCTGCATTGAGAGGACTGAGACCGACATGAATGTTGATCGATTCAACTGCAGAGAGGATTTGTACATAGAAAAGCAGCGTGTATGTGAAGAGTGA

Protein sequence

MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEASTIKAMEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKSWDKVPDGVRLEAQTDFCWLCEQPQKLLIPFEMRGYQGVYNLEKRIFEAAVRGLTRVKCILPVKFQLPDPRDPFSLEPGSVSSCSPKTKGSGSEVEKSSKLNAVIAGARAAATQFTRKYQDPQTSVHDHTSSNFGTAGKSKTEFLGGDQFQSSNFHQDEVSRANIEEQTSSYHTRSQALIAHPHQQNGAPSKVWIFFLKKVIIFKMKRSCEQKNDHLCRCIERTETDMNVDRFNCREDLYIEKQRVCEE

Homology

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BLAST of Clc02G17980 vs. NCBI nr
Match: XP_038889478.1 (uncharacterized protein LOC120079387 [Benincasa hispida])

HSP 1 Score: 558.1 bits (1437), Expect = 5.3e-155
Identity = 272/298 (91.28%), Postives = 281/298 (94.30%), Query Frame = 0


Query: 1   MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEASTIKA 60
           MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSW APLRGRLWIHAASKVPE STIKA
Sbjct: 1   MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWSAPLRGRLWIHAASKVPEDSTIKA 60

Query: 61  MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKSWDKVPDGVRLEAQTD 120
           MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCV GEELK+WDKVP+GVR+EAQTD
Sbjct: 61  MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVGGEELKNWDKVPEGVRVEAQTD 120

Query: 121 FCWLCEQPQKLLIPFEMRGYQGVYNLEKRIFEAAVRGLTRVKCILPVKFQLPDPRDPFSL 180
           FCWLCEQPQKLLIPFEMRGYQGVYNLEKRI EAAVRGLTRVKC LPVKFQLPDPRDPFSL
Sbjct: 121 FCWLCEQPQKLLIPFEMRGYQGVYNLEKRILEAAVRGLTRVKCPLPVKFQLPDPRDPFSL 180

Query: 181 EPGSVSSCSPKTKGSGSEVEKSSKLNAVIAGARAAATQFTRKYQDPQTSVHDHTSSNFGT 240
            PGSVS CSPK+KGS SEVEKSSKLNA IAGARAAATQFTRKYQDPQTSVHDHTSS+FGT
Sbjct: 181 RPGSVSLCSPKSKGSRSEVEKSSKLNAAIAGARAAATQFTRKYQDPQTSVHDHTSSSFGT 240

Query: 241 AGKSKTEFLGGDQFQSSNFHQDEVSRANIEEQTSSYHTRSQALIAHPHQQNGAPSKVW 299
           AGKS+TEFL GD+FQSSNF QDEVSRANI EQT SYHTRSQAL AH   QNGAPSK++
Sbjct: 241 AGKSRTEFLEGDRFQSSNFRQDEVSRANIGEQTVSYHTRSQALCAHTQPQNGAPSKIF 298

[Close]

BLAST of Clc02G17980 vs. NCBI nr
Match: XP_008456438.1 (PREDICTED: uncharacterized protein LOC103496378 [Cucumis melo])

HSP 1 Score: 548.1 bits (1411), Expect = 5.5e-152
Identity = 267/298 (89.60%), Postives = 280/298 (93.96%), Query Frame = 0


Query: 1   MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEASTIKA 60
           MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPE STIKA
Sbjct: 2   MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEDSTIKA 61

Query: 61  MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKSWDKVPDGVRLEAQTD 120
           MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELK+WD+VP+GVR+EAQTD
Sbjct: 62  MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKNWDEVPEGVRVEAQTD 121

Query: 121 FCWLCEQPQKLLIPFEMRGYQGVYNLEKRIFEAAVRGLTRVKCILPVKFQLPDPRDPFSL 180
           FCWLCEQPQKLLIPFEMRG+QGVYNLEKRIFEAAVRGLTRVKC LPVKFQLPDPRDPFSL
Sbjct: 122 FCWLCEQPQKLLIPFEMRGFQGVYNLEKRIFEAAVRGLTRVKCPLPVKFQLPDPRDPFSL 181

Query: 181 EPGSVSSCSPKTKGSGSEVEKSSKLNAVIAGARAAATQFTRKYQDPQTSVHDHTSSNFGT 240
           +PGSVSSCSP+T+GSGSEVEKSSKLNA IAGARAAATQFTRKYQDPQ      TSSNFG 
Sbjct: 182 KPGSVSSCSPETQGSGSEVEKSSKLNAAIAGARAAATQFTRKYQDPQ------TSSNFGM 241

Query: 241 AGKSKTEFLGGDQFQSSNFHQDEVSRANIEEQTSSYHTRSQALIAHPHQQNGAPSKVW 299
             KS+TEFLGGDQFQSSNF QD+VSR NIEEQTSSYHTRSQ L AHP QQ+ APSK++
Sbjct: 242 GSKSRTEFLGGDQFQSSNFGQDKVSRENIEEQTSSYHTRSQGLFAHPQQQSRAPSKIF 293

[Close]

BLAST of Clc02G17980 vs. NCBI nr
Match: KAA0063569.1 (ASCH domain-containing protein [Cucumis melo var. makuwa] >TYJ97896.1 ASCH domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 546.2 bits (1406), Expect = 2.1e-151
Identity = 267/296 (90.20%), Postives = 278/296 (93.92%), Query Frame = 0


Query: 1   MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEASTIKA 60
           MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPE STIKA
Sbjct: 2   MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEDSTIKA 61

Query: 61  MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKSWDKVPDGVRLEAQTD 120
           MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELK+WD+VP+GVR+EAQTD
Sbjct: 62  MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKNWDEVPEGVRVEAQTD 121

Query: 121 FCWLCEQPQKLLIPFEMRGYQGVYNLEKRIFEAAVRGLTRVKCILPVKFQLPDPRDPFSL 180
           FCWLCEQPQKLLIPFEMRG+QGVYNLEKRIFEAAVRGLTRVKC LPVKFQLPDPRDPFSL
Sbjct: 122 FCWLCEQPQKLLIPFEMRGFQGVYNLEKRIFEAAVRGLTRVKCPLPVKFQLPDPRDPFSL 181

Query: 181 EPGSVSSCSPKTKGSGSEVEKSSKLNAVIAGARAAATQFTRKYQDPQTSVHDHTSSNFGT 240
           +PGSVSSCSP+T+GSGSEVEKSSKLNA IAGARAAATQFTRKYQDPQ      TSSNFG 
Sbjct: 182 KPGSVSSCSPETQGSGSEVEKSSKLNAAIAGARAAATQFTRKYQDPQ------TSSNFGM 241

Query: 241 AGKSKTEFLGGDQFQSSNFHQDEVSRANIEEQTSSYHTRSQALIAHPHQQNGAPSK 297
             KS+TEFLGGDQFQSSNF QD+VSR NIEEQTSSYHTRSQ L AHP QQ+ APSK
Sbjct: 242 GSKSRTEFLGGDQFQSSNFGQDKVSRENIEEQTSSYHTRSQGLFAHPQQQSRAPSK 291

[Close]

BLAST of Clc02G17980 vs. NCBI nr
Match: XP_022999089.1 (uncharacterized protein LOC111493572 [Cucurbita maxima])

HSP 1 Score: 525.4 bits (1352), Expect = 3.8e-145
Identity = 259/303 (85.48%), Postives = 278/303 (91.75%), Query Frame = 0


Query: 1   MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEASTIKA 60
           MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSW APLRGRLWIHAA+KVPE STIKA
Sbjct: 1   MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWSAPLRGRLWIHAANKVPEDSTIKA 60

Query: 61  MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKSWDKVPDGVRLEAQTD 120
           MEDFYRE+YALDGITDLKFPEHYPVSRLLGCVEVVGCV G+ELKSWDKVP+GVRLEAQTD
Sbjct: 61  MEDFYREVYALDGITDLKFPEHYPVSRLLGCVEVVGCVHGDELKSWDKVPEGVRLEAQTD 120

Query: 121 FCWLCEQPQKLLIPFEMRGYQGVYNLEKRIFEAAVRGLTRVKCILPVKFQLPDPRDPFSL 180
           FCWLCEQPQKLLIPFEMRGYQ VYNLEK+IFEAAVRGL  VKC LPVKFQLPDPRDPFSL
Sbjct: 121 FCWLCEQPQKLLIPFEMRGYQRVYNLEKKIFEAAVRGLIHVKCPLPVKFQLPDPRDPFSL 180

Query: 181 EPGSVSSCSPKTKGSGSEVEKSSKLNAVIAGARAAATQFTRKYQDPQTSVHDHTSSNFGT 240
           +PGSVSS SP+TKGSGSEVEKSSKL+AVIAGARAAATQF++KYQDPQTS+HD+T SNFG 
Sbjct: 181 KPGSVSSRSPETKGSGSEVEKSSKLDAVIAGARAAATQFSKKYQDPQTSIHDNT-SNFGK 240

Query: 241 AGKSKTEFLGGDQFQSSNFHQDEVSRANIEEQTSSYHTRSQALIAHPHQQNGAPSKVWIF 300
           AGKS+T     D+ QS+NF QDEV RANIEEQTSSYHT+S+AL   P QQNGAPSK++  
Sbjct: 241 AGKSRT-----DEAQSTNFRQDEVPRANIEEQTSSYHTQSKALFTQPQQQNGAPSKIFAA 297

Query: 301 FLK 304
            LK
Sbjct: 301 ALK 297

[Close]

BLAST of Clc02G17980 vs. NCBI nr
Match: XP_031737351.1 (uncharacterized protein LOC101222080 isoform X2 [Cucumis sativus])

HSP 1 Score: 520.4 bits (1339), Expect = 1.2e-143
Identity = 261/325 (80.31%), Postives = 275/325 (84.62%), Query Frame = 0


Query: 1   MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEASTIKA 60
           MKGRNSGN SNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPE STIKA
Sbjct: 2   MKGRNSGNFSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEDSTIKA 61

Query: 61  MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKSWDKVPDGVRLEAQTD 120
           MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELK+WDKVP+GVR+EAQTD
Sbjct: 62  MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKNWDKVPEGVRVEAQTD 121

Query: 121 FCWLCEQPQKLLIPFEMRGYQGVYNLEKRIFEAAVRGLTRVKCILPVKFQLPDPRDPFSL 180
           FCWLCEQPQKLLIPFEMRG+QGVYNLEKRIFEAAVRGLTRVKC LPVKFQLPDPRDPFSL
Sbjct: 122 FCWLCEQPQKLLIPFEMRGFQGVYNLEKRIFEAAVRGLTRVKCPLPVKFQLPDPRDPFSL 181

Query: 181 EPGSVSSCSPKTKGSGSEVEKSSKLNAVIAGARAAATQFTRKYQDPQTSV---------- 240
           +PGSVSSCSP+TKGSGSEV+KSSKLNA IAGARAAATQFTRKYQDPQTS           
Sbjct: 182 KPGSVSSCSPETKGSGSEVDKSSKLNAAIAGARAAATQFTRKYQDPQTSSDFGMGSKSRT 241

Query: 241 -----HDHTSSNF------------GTAGKSKTEFLGGDQFQSSNFHQDEVSRANIEEQT 299
                    SSNF            G   KS+TEFLG DQFQSS+F QD+VSR NI+EQT
Sbjct: 242 EFLGGDQFQSSNFRQDNVSRGNIEVGMGSKSRTEFLGRDQFQSSHFRQDKVSRGNIQEQT 301

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BLAST of Clc02G17980 vs. ExPASy Swiss-Prot
Match: Q15650 (Activating signal cointegrator 1 OS=Homo sapiens OX=9606 GN=TRIP4 PE=1 SV=4)

HSP 1 Score: 132.1 bits (331), Expect = 1.2e-29
Identity = 59/148 (39.86%), Postives = 95/148 (64.19%), Query Frame = 0


Query: 13  CLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEASTIKAMEDFYRELYALD 72
           CL++HQPWASLLV GIKR+EGRSW  P RGRLWI A +K P    +  ++  YR L    
Sbjct: 436 CLSVHQPWASLLVRGIKRVEGRSWYTPHRGRLWIAATAKKPSPQEVSELQATYRLLRG-- 495

Query: 73  GITDLKFPEHYPVSRLLGCVEVVGCVRGEELKSWDKVPDGVRLEAQTDFCWLCEQPQKLL 132
              D++FP  YP   LLGCV+++ C+  ++ K  ++ PD +  E+ + F ++C+ PQ+++
Sbjct: 496 --KDVEFPNDYPSGCLLGCVDLIDCLSQKQFK--EQFPD-ISQESDSPFVFICKNPQEMV 555

Query: 133 IPFEMRGYQGVYNLEKRIFEAAVRGLTR 161
           + F ++G   ++ L+ +I + A +GL +
Sbjct: 556 VKFPIKGNPKIWKLDSKIHQGAKKGLMK 576

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BLAST of Clc02G17980 vs. ExPASy Swiss-Prot
Match: Q9QXN3 (Activating signal cointegrator 1 OS=Mus musculus OX=10090 GN=Trip4 PE=1 SV=2)

HSP 1 Score: 131.7 bits (330), Expect = 1.6e-29
Identity = 59/148 (39.86%), Postives = 94/148 (63.51%), Query Frame = 0


Query: 13  CLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEASTIKAMEDFYRELYALD 72
           CL+MHQPWASLLV GIKR+EGRSW  P RGRLWI A  K P    +  ++  YR L    
Sbjct: 436 CLSMHQPWASLLVRGIKRVEGRSWYTPHRGRLWIAATGKRPSPQEVSELQATYRLLRG-- 495

Query: 73  GITDLKFPEHYPVSRLLGCVEVVGCVRGEELKSWDKVPDGVRLEAQTDFCWLCEQPQKLL 132
              D++FP  YP   LLGCV+++ C+  ++ +  ++ PD +  E+ + F ++C+ PQ+++
Sbjct: 496 --KDVEFPNDYPSGCLLGCVDLIDCLSQKQFQ--EQFPD-ISQESDSSFVFICKNPQEMV 555

Query: 133 IPFEMRGYQGVYNLEKRIFEAAVRGLTR 161
           + F ++G   ++ L+ +I + A +GL +
Sbjct: 556 VKFPIKGNPKIWKLDSKIHQGAKKGLMK 576

[Close]

BLAST of Clc02G17980 vs. ExPASy TrEMBL
Match: A0A1S3C382 (uncharacterized protein LOC103496378 OS=Cucumis melo OX=3656 GN=LOC103496378 PE=4 SV=1)

HSP 1 Score: 548.1 bits (1411), Expect = 2.6e-152
Identity = 267/298 (89.60%), Postives = 280/298 (93.96%), Query Frame = 0


Query: 1   MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEASTIKA 60
           MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPE STIKA
Sbjct: 2   MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEDSTIKA 61

Query: 61  MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKSWDKVPDGVRLEAQTD 120
           MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELK+WD+VP+GVR+EAQTD
Sbjct: 62  MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKNWDEVPEGVRVEAQTD 121

Query: 121 FCWLCEQPQKLLIPFEMRGYQGVYNLEKRIFEAAVRGLTRVKCILPVKFQLPDPRDPFSL 180
           FCWLCEQPQKLLIPFEMRG+QGVYNLEKRIFEAAVRGLTRVKC LPVKFQLPDPRDPFSL
Sbjct: 122 FCWLCEQPQKLLIPFEMRGFQGVYNLEKRIFEAAVRGLTRVKCPLPVKFQLPDPRDPFSL 181

Query: 181 EPGSVSSCSPKTKGSGSEVEKSSKLNAVIAGARAAATQFTRKYQDPQTSVHDHTSSNFGT 240
           +PGSVSSCSP+T+GSGSEVEKSSKLNA IAGARAAATQFTRKYQDPQ      TSSNFG 
Sbjct: 182 KPGSVSSCSPETQGSGSEVEKSSKLNAAIAGARAAATQFTRKYQDPQ------TSSNFGM 241

Query: 241 AGKSKTEFLGGDQFQSSNFHQDEVSRANIEEQTSSYHTRSQALIAHPHQQNGAPSKVW 299
             KS+TEFLGGDQFQSSNF QD+VSR NIEEQTSSYHTRSQ L AHP QQ+ APSK++
Sbjct: 242 GSKSRTEFLGGDQFQSSNFGQDKVSRENIEEQTSSYHTRSQGLFAHPQQQSRAPSKIF 293

[Close]

BLAST of Clc02G17980 vs. ExPASy TrEMBL
Match: A0A5A7VDG8 (ASCH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G001120 PE=4 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 1.0e-151
Identity = 267/296 (90.20%), Postives = 278/296 (93.92%), Query Frame = 0


Query: 1   MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEASTIKA 60
           MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPE STIKA
Sbjct: 2   MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEDSTIKA 61

Query: 61  MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKSWDKVPDGVRLEAQTD 120
           MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELK+WD+VP+GVR+EAQTD
Sbjct: 62  MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKNWDEVPEGVRVEAQTD 121

Query: 121 FCWLCEQPQKLLIPFEMRGYQGVYNLEKRIFEAAVRGLTRVKCILPVKFQLPDPRDPFSL 180
           FCWLCEQPQKLLIPFEMRG+QGVYNLEKRIFEAAVRGLTRVKC LPVKFQLPDPRDPFSL
Sbjct: 122 FCWLCEQPQKLLIPFEMRGFQGVYNLEKRIFEAAVRGLTRVKCPLPVKFQLPDPRDPFSL 181

Query: 181 EPGSVSSCSPKTKGSGSEVEKSSKLNAVIAGARAAATQFTRKYQDPQTSVHDHTSSNFGT 240
           +PGSVSSCSP+T+GSGSEVEKSSKLNA IAGARAAATQFTRKYQDPQ      TSSNFG 
Sbjct: 182 KPGSVSSCSPETQGSGSEVEKSSKLNAAIAGARAAATQFTRKYQDPQ------TSSNFGM 241

Query: 241 AGKSKTEFLGGDQFQSSNFHQDEVSRANIEEQTSSYHTRSQALIAHPHQQNGAPSK 297
             KS+TEFLGGDQFQSSNF QD+VSR NIEEQTSSYHTRSQ L AHP QQ+ APSK
Sbjct: 242 GSKSRTEFLGGDQFQSSNFGQDKVSRENIEEQTSSYHTRSQGLFAHPQQQSRAPSK 291

[Close]

BLAST of Clc02G17980 vs. ExPASy TrEMBL
Match: A0A6J1KG32 (uncharacterized protein LOC111493572 OS=Cucurbita maxima OX=3661 GN=LOC111493572 PE=4 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.8e-145
Identity = 259/303 (85.48%), Postives = 278/303 (91.75%), Query Frame = 0


Query: 1   MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEASTIKA 60
           MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSW APLRGRLWIHAA+KVPE STIKA
Sbjct: 1   MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWSAPLRGRLWIHAANKVPEDSTIKA 60

Query: 61  MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKSWDKVPDGVRLEAQTD 120
           MEDFYRE+YALDGITDLKFPEHYPVSRLLGCVEVVGCV G+ELKSWDKVP+GVRLEAQTD
Sbjct: 61  MEDFYREVYALDGITDLKFPEHYPVSRLLGCVEVVGCVHGDELKSWDKVPEGVRLEAQTD 120

Query: 121 FCWLCEQPQKLLIPFEMRGYQGVYNLEKRIFEAAVRGLTRVKCILPVKFQLPDPRDPFSL 180
           FCWLCEQPQKLLIPFEMRGYQ VYNLEK+IFEAAVRGL  VKC LPVKFQLPDPRDPFSL
Sbjct: 121 FCWLCEQPQKLLIPFEMRGYQRVYNLEKKIFEAAVRGLIHVKCPLPVKFQLPDPRDPFSL 180

Query: 181 EPGSVSSCSPKTKGSGSEVEKSSKLNAVIAGARAAATQFTRKYQDPQTSVHDHTSSNFGT 240
           +PGSVSS SP+TKGSGSEVEKSSKL+AVIAGARAAATQF++KYQDPQTS+HD+T SNFG 
Sbjct: 181 KPGSVSSRSPETKGSGSEVEKSSKLDAVIAGARAAATQFSKKYQDPQTSIHDNT-SNFGK 240

Query: 241 AGKSKTEFLGGDQFQSSNFHQDEVSRANIEEQTSSYHTRSQALIAHPHQQNGAPSKVWIF 300
           AGKS+T     D+ QS+NF QDEV RANIEEQTSSYHT+S+AL   P QQNGAPSK++  
Sbjct: 241 AGKSRT-----DEAQSTNFRQDEVPRANIEEQTSSYHTQSKALFTQPQQQNGAPSKIFAA 297

Query: 301 FLK 304
            LK
Sbjct: 301 ALK 297

[Close]

BLAST of Clc02G17980 vs. ExPASy TrEMBL
Match: A0A0A0LFF1 (ASCH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009570 PE=4 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 5.9e-144
Identity = 261/325 (80.31%), Postives = 275/325 (84.62%), Query Frame = 0


Query: 1   MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEASTIKA 60
           MKGRNSGN SNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPE STIKA
Sbjct: 2   MKGRNSGNFSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEDSTIKA 61

Query: 61  MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKSWDKVPDGVRLEAQTD 120
           MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELK+WDKVP+GVR+EAQTD
Sbjct: 62  MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKNWDKVPEGVRVEAQTD 121

Query: 121 FCWLCEQPQKLLIPFEMRGYQGVYNLEKRIFEAAVRGLTRVKCILPVKFQLPDPRDPFSL 180
           FCWLCEQPQKLLIPFEMRG+QGVYNLEKRIFEAAVRGLTRVKC LPVKFQLPDPRDPFSL
Sbjct: 122 FCWLCEQPQKLLIPFEMRGFQGVYNLEKRIFEAAVRGLTRVKCPLPVKFQLPDPRDPFSL 181

Query: 181 EPGSVSSCSPKTKGSGSEVEKSSKLNAVIAGARAAATQFTRKYQDPQTSV---------- 240
           +PGSVSSCSP+TKGSGSEV+KSSKLNA IAGARAAATQFTRKYQDPQTS           
Sbjct: 182 KPGSVSSCSPETKGSGSEVDKSSKLNAAIAGARAAATQFTRKYQDPQTSSDFGMGSKSRT 241

Query: 241 -----HDHTSSNF------------GTAGKSKTEFLGGDQFQSSNFHQDEVSRANIEEQT 299
                    SSNF            G   KS+TEFLG DQFQSS+F QD+VSR NI+EQT
Sbjct: 242 EFLGGDQFQSSNFRQDNVSRGNFEVGMGSKSRTEFLGRDQFQSSHFRQDKVSRGNIQEQT 301

[Close]

BLAST of Clc02G17980 vs. ExPASy TrEMBL
Match: A0A6J1G4I1 (uncharacterized protein LOC111450671 OS=Cucurbita moschata OX=3662 GN=LOC111450671 PE=4 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 1.8e-140
Identity = 251/303 (82.84%), Postives = 272/303 (89.77%), Query Frame = 0


Query: 1   MKGRNSGNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEASTIKA 60
           MKGRNSGN SNPCLTMHQPWASLLVYGIKRIEGRSW APLRGRLWIHAASKVPE STIKA
Sbjct: 1   MKGRNSGNFSNPCLTMHQPWASLLVYGIKRIEGRSWSAPLRGRLWIHAASKVPEDSTIKA 60

Query: 61  MEDFYRELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKSWDKVPDGVRLEAQTD 120
           MEDFYRE+YALDGITDLKFPEHYPVSRLLGCVEVVGCV G+EL+SWDKVP+GVRLEAQTD
Sbjct: 61  MEDFYREVYALDGITDLKFPEHYPVSRLLGCVEVVGCVHGDELQSWDKVPEGVRLEAQTD 120

Query: 121 FCWLCEQPQKLLIPFEMRGYQGVYNLEKRIFEAAVRGLTRVKCILPVKFQLPDPRDPFSL 180
           FCWLCEQPQKLLIPFEMRGYQ VYNLEK+IFEAAVRGL  VK  LPVKFQLPDPRDPFSL
Sbjct: 121 FCWLCEQPQKLLIPFEMRGYQRVYNLEKKIFEAAVRGLIHVKSPLPVKFQLPDPRDPFSL 180

Query: 181 EPGSVSSCSPKTKGSGSEVEKSSKLNAVIAGARAAATQFTRKYQDPQTSVHDHTSSNFGT 240
           +PGSVSS SP+T GSG +VEKSSKL+AVIAGARAAATQF+++YQDPQ S+HD+T SNFG 
Sbjct: 181 KPGSVSSRSPETIGSGPDVEKSSKLDAVIAGARAAATQFSKEYQDPQASIHDNT-SNFGR 240

Query: 241 AGKSKTEFLGGDQFQSSNFHQDEVSRANIEEQTSSYHTRSQALIAHPHQQNGAPSKVWIF 300
           AGKS+T     D+ QS+NF QDE  RANIEEQTSSYHTRS+AL   P QQNGAPSK++  
Sbjct: 241 AGKSRT-----DEAQSTNFRQDEAPRANIEEQTSSYHTRSKALFTQPQQQNGAPSKIFAA 297

Query: 301 FLK 304
            L+
Sbjct: 301 ALR 297

[Close]

BLAST of Clc02G17980 vs. TAIR 10
Match: AT2G20410.1 (RNA-binding ASCH domain protein )

HSP 1 Score: 329.7 bits (844), Expect = 2.8e-90
Identity = 157/248 (63.31%), Postives = 196/248 (79.03%), Query Frame = 0


Query: 7   GNLSNPCLTMHQPWASLLVYGIKRIEGRSWPAPLRGRLWIHAASKVPEASTIKAMEDFYR 66
           GN  NPCLTMHQPWASLLV+GIKRIEGRSWP+P+RGRLWIHAASKVP+ +TIKAME+FY+
Sbjct: 4   GNYKNPCLTMHQPWASLLVHGIKRIEGRSWPSPIRGRLWIHAASKVPDEATIKAMEEFYQ 63

Query: 67  ELYALDGITDLKFPEHYPVSRLLGCVEVVGCVRGEELKSWDKVPDGVRLEAQTDFCWLCE 126
           ++YA+DGITD++FP+HYPVSRL+GCVEVVGCV  +EL++WD +P GVRLE QT+FCWLCE
Sbjct: 64  QIYAVDGITDIQFPQHYPVSRLIGCVEVVGCVTSDELQNWDALPQGVRLEGQTNFCWLCE 123

Query: 127 QPQKLLIPFEMRGYQGVYNLEKRIFEAAVRGLTRVKCILPVKFQLPDPRDPFSLEPGSVS 186
           +PQKL+IPFEMRGYQGVYNLE +I+ AA RGL   +    VKF LPDP+DPFSL+PGS+ 
Sbjct: 124 KPQKLIIPFEMRGYQGVYNLENKIYVAAARGLMPSQNSFKVKFPLPDPKDPFSLKPGSIP 183

Query: 187 SCSPKTKGSGSE--------VEKSSKLNAVIAGARAAATQFTRKYQDPQT-SVHDHTSSN 246
               + K   S+        +++ + L A IAGA+AAATQF++K Q  QT ++ D+T   
Sbjct: 184 CTMQEKKELDSKQVTSLTAAIKQVTSLTAAIAGAKAAATQFSKKGQSLQTNNIFDYT--- 243

The following BLAST results are available for this feature:

BLAST of Clc02G17980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889478.1	5.3e-155	91.28	uncharacterized protein LOC120079387 [Benincasa hispida]	[more]
XP_008456438.1	5.5e-152	89.60	PREDICTED: uncharacterized protein LOC103496378 [Cucumis melo]	[more]
KAA0063569.1	2.1e-151	90.20	ASCH domain-containing protein [Cucumis melo var. makuwa] >TYJ97896.1 ASCH domai...	[more]
XP_022999089.1	3.8e-145	85.48	uncharacterized protein LOC111493572 [Cucurbita maxima]	[more]
XP_031737351.1	1.2e-143	80.31	uncharacterized protein LOC101222080 isoform X2 [Cucumis sativus]	[more]

BLAST of Clc02G17980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q15650	1.2e-29	39.86	Activating signal cointegrator 1 OS=Homo sapiens OX=9606 GN=TRIP4 PE=1 SV=4	[more]
Q9QXN3	1.6e-29	39.86	Activating signal cointegrator 1 OS=Mus musculus OX=10090 GN=Trip4 PE=1 SV=2	[more]

BLAST of Clc02G17980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C382	2.6e-152	89.60	uncharacterized protein LOC103496378 OS=Cucumis melo OX=3656 GN=LOC103496378 PE=...	[more]
A0A5A7VDG8	1.0e-151	90.20	ASCH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1KG32	1.8e-145	85.48	uncharacterized protein LOC111493572 OS=Cucurbita maxima OX=3661 GN=LOC111493572...	[more]
A0A0A0LFF1	5.9e-144	80.31	ASCH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009570 PE=4 S...	[more]
A0A6J1G4I1	1.8e-140	82.84	uncharacterized protein LOC111450671 OS=Cucurbita moschata OX=3662 GN=LOC1114506...	[more]

BLAST of Clc02G17980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20410.1	2.8e-90	63.31	RNA-binding ASCH domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007374	ASCH domain	PFAM	PF04266	ASCH	coord: 14..111 e-value: 1.2E-14 score: 54.8
None	No IPR available	GENE3D	2.30.130.30	Hypothetical protein.	coord: 13..134 e-value: 8.5E-12 score: 47.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..242
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..200
None	No IPR available	PANTHER	PTHR12963:SF0	ACTIVATING SIGNAL COINTEGRATOR 1	coord: 10..229
None	No IPR available	CDD	cd06554	ASCH_ASC-1_like	coord: 12..131 e-value: 8.54513E-47 score: 152.87
IPR039128	Activating signal cointegrator 1-like	PANTHER	PTHR12963	THYROID RECEPTOR INTERACTING PROTEIN RELATED	coord: 10..229
IPR015947	PUA-like superfamily	SUPERFAMILY	88697	PUA domain-like	coord: 12..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G17980.2	Clc02G17980.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003713	transcription coactivator activity