
Clc02G17950 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAGTTTCAGTCTTTCAGAATTTGCTCGATTTTCTTCTCTTTGCACATTTGGTGGAGAATTGCTTGATTTGGAAGCTTCAATTTCGAAGAATTGAATGGGGGAAGCCGCTGAATATTTCTCCAAAGACTTCGAATGGGAGGATCTTCGCGTTCGGGTCGAGAACGACCCGCTTTTGCAGTACCATTTGCTTCCATTTGAGCCCTGCAATTCCATTCCTTCAGTTTCTCCAGAAGCCGATTCGGACGCATGGAGCCGCTTTCACCTTCGCCACTCCTCCGGCAAATTCTTCAAGGTTTTAGTTCCGTTTAGCATTTGAACATTTCTTTGTATTCATAGCATGACAGTAACCTAACTTTGTTGTTTCTCTTAGATTGGTTGTGATTTGATTACTTTATGTTTGGTTTCAGGAAAGGAGGTATTTGTTGAAGGAATTCCCTGAACTTGTTTCCTGTAAGAAGTATTGTAAAGTTTTGGAGGTGGGTTGTGGTAATGGAAGCACTGTTATTCCAATCTTGCGGTAACCCCCAACGTATGCTTTTACTTATTGATATTCATCAATTCTTAAGTCTTAAGGGAGTTTGATAACAATTTTTTCTGTTTTTTGTTTTTAAAAATTTAGTTGATAGAAAGTTTTTGCATTGTGTGTGTTTATATGAAATATTTGTCAAAAGTCTGGCTATGATTCCAAAAACCTTATCGTTGAAATTAAATTAGGAAGTAGAGAAGAATCAGAGTAAATAGGATGATACTTTTAGAATAGAAGATTAGAAAGAAAAATGTTATCGAATGGGTCCTTAAAGCTTCCACACTTTCTATCTTGCTCTTTAAATTCCGCCAATGTCTCTATGTGATATGTTATTGTTGTTTAGGTTAGCTTTCCTTTTGGAGTGAAAAGGAACATCCTTATGAGACGAATAATCTGTATCCTCCTCAATTTCATTAAGACAAGTTCAATAACTTGTTTTAGGGTCCTTAATGTAATCTCGTAACATGTTCCAATCTCAATGAGTTAGGAGCTAGAGGTGCCACATTATAAGAGATAATTGATCCTTCACTTCCTTTTGAGGTCTTGATTCTGGACCATCTGTCCTACTCTATGCAGGTTCTCCTTTGTATCACCGGTGGGATATATGTTCATATGGTTATACTCTTCATATTCCATTAAAAATAAAAAATTCTCATTTAGATCAATATTCATCTACTTCATTATTAAAGTTAGAGCTTATAGAGCAATGATAATCGAGTGGCCAAGTTGAGCCATTTACTGAGGGTCTATTGAAATGACCTTTTGGTTTTAATACCAAAACCAATTAGAATGGAGCATGGTCATATCATTTTCCTCAGTCTATGAAAGATAATGTGTATTCTATACATTTTTCTAACTCTGTTCAAGAGTTGAATCATATATATTCCTTCATGGAACTTTATTAGGTTTTTTTTAGATAAGAAACAATTTTATTGATGAATGAAATATCCAAAGAGATACAAAAGGCTAGTAAATGGATCAAAATATATCATCAATAAGTAACAAGGAGATTAGGCTGTAATTAGTAAAGGGTTGTAAATTTTTCATTAAAAGAAAGCATTGAACATGGCTAGATCAAGCATCAAAGAAAACTTTATTAGGTGTCATGAATGCATCTTGTATAGGTGAAGAATATAGAATTAAATACAGCCTTCACGATGTTTTATGGACATCCCAATACTTGTAGTGCATTTATATGGTCAAGATAGAAGAAATTTGAACAATTAAATAGGGCCTTTGAGTGGTAGATCTTATTAGCAATTCATTATCCTTACGCATGATTGCTTTCTTTGTAGTGGGAACGAGAATATCATCATCTATGCTTGCGATTGTAGCACAGGAACTCTTGAGAGAGCTAAAGAGATTTTAAATAATGCCGGCATTGCATCTTTAAATGATCGATTTTGTCCATTCTATTGTGATTTTTCTATTAGTAAGTTTCCAACATGGTTGGCTTGCAATTCATGCCGTGGAAACACTTTCCAACAGCAGCCGGGTTTTACTACTCCAGGTTGTTATTTTGCCTATCCATTTGTACTCATTAACTGCAAGATTATTGCTTTCCTTAGACCCTTATCCATCTTTCTCTATGTTTGCAGAGAATGATGGATCTCAGGCCACTTGTTTATTTGCATTAGAAGAAAGTGGATGCTGCATTGGTGGGGTTGATTTTCTTACTTTGGTATGCACCTCTTTTGGTATCTTAATACAATTACTTTAATTTTATCAAAGGCATTGGCCTGCAAAAAAATTTATGCACGTTGAATTTTGATTCCTGATAGTCGTGGAACATTACTTATTTACACACACACACACAAAAAAAACCAGCTAAAAGTCCCTTAGGCATGAACACTCTCTTTATTGGAGAGAAAGATGCAAAATTTTGGCCTTTTGAGAACTGTGCGCCTAGGTTTGCTTTCTAAAATGCTACCTGTCCTGCAGGCTGCATCTATTGTTTAGATATTGACCTAGGTTCCAACTCTTTTGACAATATGTAGCTCAAGCACTATGCTACTTGAACTATGCTCATTTTGGCCTAGAATCCAACTTTTTTACCCAACATCACTAAGGGAAAAACGAATAATATGTTGTGTACCACTAACAAACTTCCTTCAGTTCTAATGTTTTCTTGAGTCTTGGTAATTACAGTTAGAATGTTCTTTGCCTATTCACTATTTCAGATATTTACATTATCAGCAGTGCCTCTCCAGAGGATGCCAGCATCTATCAGAGAATGCTTTATGGTTTTGAAGCCTGGAGGCCTGCTTTTATTTCGGGATTATGGTAATCAATTATGATCTGACCAATGATGATATATTTTAGTTTGCTTTAAATTCTAAGTAAAGAAAATTTCTTTTTTCCAAGTTCTTCCAGGCATATGTAATGTGTCTGTCTTAAACATTCTGCCAATCGATGTTTGGTTTGATGGAATGCAGGTCTATACGATATGACTATGCTTCGATTTGGGCAAGATCAAAGAGTAGGATTCAGGGAATATGTCAGATTAGATGGAACACGTTCTTATTTCTTCTGCTTAAATACCTTGAGAGATCTGTTTGTCAATGCAGGCTTTGTTGAGGTACTTGTTCTGTTTTGAAAAAGTATCAAATTTAGGGATGATATAGGATTTAAGCCGAAGTATAAATGAAATGACAATTACTATTAGCATGTAGCTAGTTATTATAATTCATATGATATCCCATCTGCTTACAATGATGTACTGCCAATGACCTTATTAAGTATGATATATTGAGTTGGGAAAATATAATTGATAGCATCCTGACTAACTTTAAAGCACAATTATCGTTGCAGCTCGAGCTGGAATATTGTTGTGTGAAGTCCTTGAATCGCCGAAATGGAAAGAGTATGGAGAGGGTGTGGGTTCATGGAAAGTTCCAGAAGCCTGTCTCGTGAATCAAGCTAGAGGCACAGAACAACCTTTGAAGTTTCTTGGCAAGTGATTGTGAATTTTCCTTAAAAAGGCTGATGAGGATGGATTCTGTAACTTCTTGATTTTGGGTTCAAGTCTAGAATCTGGCCTCGAGATGGATGAGACTTCTATAAAATTAGTGAGGATGGGTCATGAGCATAAAAAAAATGAACAAAAGAAAACTTTTTTATTAATCATGAATTTGGATGAACTATGAGGATCTTTGTTTGACTTATGATTAGAGGAGTTTATTGATGTCCCCTTGATTATATTAGAAAATAAGTGTTAGAATTGGTAGTGAAAGTTCTGATGGAGTGAAACATTAGGGCCCTACACATGGGGGGAGGTTGGTCAACTTGAGCAGTTCTC CAAGTTTCAGTCTTTCAGAATTTGCTCGATTTTCTTCTCTTTGCACATTTGGTGGAGAATTGCTTGATTTGGAAGCTTCAATTTCGAAGAATTGAATGGGGGAAGCCGCTGAATATTTCTCCAAAGACTTCGAATGGGAGGATCTTCGCGTTCGGGTCGAGAACGACCCGCTTTTGCAGTACCATTTGCTTCCATTTGAGCCCTGCAATTCCATTCCTTCAGTTTCTCCAGAAGCCGATTCGGACGCATGGAGCCGCTTTCACCTTCGCCACTCCTCCGGCAAATTCTTCAAGGAAAGGAGGTATTTGTTGAAGGAATTCCCTGAACTTGTTTCCTGTAAGAAGTATTGTAAAGTTTTGGAGGTGGGTTGTGGTAATGGAAGCACTGTTATTCCAATCTTGCGTGGGAACGAGAATATCATCATCTATGCTTGCGATTGTAGCACAGGAACTCTTGAGAGAGCTAAAGAGATTTTAAATAATGCCGGCATTGCATCTTTAAATGATCGATTTTGTCCATTCTATTGTGATTTTTCTATTAGTAAGTTTCCAACATGGTTGGCTTGCAATTCATGCCGTGGAAACACTTTCCAACAGCAGCCGGGTTTTACTACTCCAGAGAATGATGGATCTCAGGCCACTTGTTTATTTGCATTAGAAGAAAGTGGATGCTGCATTGGTGGGGTTGATTTTCTTACTTTGATATTTACATTATCAGCAGTGCCTCTCCAGAGGATGCCAGCATCTATCAGAGAATGCTTTATGGTTTTGAAGCCTGGAGGCCTGCTTTTATTTCGGGATTATGGTCTATACGATATGACTATGCTTCGATTTGGGCAAGATCAAAGAGTAGGATTCAGGGAATATGTCAGATTAGATGGAACACGTTCTTATTTCTTCTGCTTAAATACCTTGAGAGATCTGTTTGTCAATGCAGGCTTTGTTGAGCATGTAGCTAGTTATTATAATTCATATGATATCCCATCTGCTTACAATGATGTACTGCCAATGACCTTATTAACTCGAGCTGGAATATTGTTGTGTGAAGTCCTTGAATCGCCGAAATGGAAAGAGTATGGAGAGGGTGTGGGTTCATGGAAAGTTCCAGAAGCCTGTCTCGTGAATCAAGCTAGAGGCACAGAACAACCTTTGAAGTTTCTTGGCAAGTGATTGTGAATTTTCCTTAAAAAGGCTGATGAGGATGGATTCTGTAACTTCTTGATTTTGGGTTCAAGTCTAGAATCTGGCCTCGAGATGGATGAGACTTCTATAAAATTAGTGAGGATGGGTCATGAGCATAAAAAAAATGAACAAAAGAAAACTTTTTTATTAATCATGAATTTGGATGAACTATGAGGATCTTTGTTTGACTTATGATTAGAGGAGTTTATTGATGTCCCCTTGATTATATTAGAAAATAAGTGTTAGAATTGGTAGTGAAAGTTCTGATGGAGTGAAACATTAGGGCCCTACACATGGGGGGAGGTTGGTCAACTTGAGCAGTTCTC ATGGGGGAAGCCGCTGAATATTTCTCCAAAGACTTCGAATGGGAGGATCTTCGCGTTCGGGTCGAGAACGACCCGCTTTTGCAGTACCATTTGCTTCCATTTGAGCCCTGCAATTCCATTCCTTCAGTTTCTCCAGAAGCCGATTCGGACGCATGGAGCCGCTTTCACCTTCGCCACTCCTCCGGCAAATTCTTCAAGGAAAGGAGGTATTTGTTGAAGGAATTCCCTGAACTTGTTTCCTGTAAGAAGTATTGTAAAGTTTTGGAGGTGGGTTGTGGTAATGGAAGCACTGTTATTCCAATCTTGCGTGGGAACGAGAATATCATCATCTATGCTTGCGATTGTAGCACAGGAACTCTTGAGAGAGCTAAAGAGATTTTAAATAATGCCGGCATTGCATCTTTAAATGATCGATTTTGTCCATTCTATTGTGATTTTTCTATTAGTAAGTTTCCAACATGGTTGGCTTGCAATTCATGCCGTGGAAACACTTTCCAACAGCAGCCGGGTTTTACTACTCCAGAGAATGATGGATCTCAGGCCACTTGTTTATTTGCATTAGAAGAAAGTGGATGCTGCATTGGTGGGGTTGATTTTCTTACTTTGATATTTACATTATCAGCAGTGCCTCTCCAGAGGATGCCAGCATCTATCAGAGAATGCTTTATGGTTTTGAAGCCTGGAGGCCTGCTTTTATTTCGGGATTATGGTCTATACGATATGACTATGCTTCGATTTGGGCAAGATCAAAGAGTAGGATTCAGGGAATATGTCAGATTAGATGGAACACGTTCTTATTTCTTCTGCTTAAATACCTTGAGAGATCTGTTTGTCAATGCAGGCTTTGTTGAGCATGTAGCTAGTTATTATAATTCATATGATATCCCATCTGCTTACAATGATGTACTGCCAATGACCTTATTAACTCGAGCTGGAATATTGTTGTGTGAAGTCCTTGAATCGCCGAAATGGAAAGAGTATGGAGAGGGTGTGGGTTCATGGAAAGTTCCAGAAGCCTGTCTCGTGAATCAAGCTAGAGGCACAGAACAACCTTTGAAGTTTCTTGGCAAGTGA MGEAAEYFSKDFEWEDLRVRVENDPLLQYHLLPFEPCNSIPSVSPEADSDAWSRFHLRHSSGKFFKERRYLLKEFPELVSCKKYCKVLEVGCGNGSTVIPILRGNENIIIYACDCSTGTLERAKEILNNAGIASLNDRFCPFYCDFSISKFPTWLACNSCRGNTFQQQPGFTTPENDGSQATCLFALEESGCCIGGVDFLTLIFTLSAVPLQRMPASIRECFMVLKPGGLLLFRDYGLYDMTMLRFGQDQRVGFREYVRLDGTRSYFFCLNTLRDLFVNAGFVEHVASYYNSYDIPSAYNDVLPMTLLTRAGILLCEVLESPKWKEYGEGVGSWKVPEACLVNQARGTEQPLKFLGK Homology
BLAST of Clc02G17950 vs. NCBI nr
Match: XP_038890924.1 (tRNA N(3)-methylcytidine methyltransferase METTL6 [Benincasa hispida]) HSP 1 Score: 566.6 bits (1459), Expect = 1.5e-157 Identity = 269/289 (93.08%), Postives = 272/289 (94.12%), Query Frame = 0
BLAST of Clc02G17950 vs. NCBI nr
Match: XP_011648734.1 (tRNA N(3)-methylcytidine methyltransferase METTL6 [Cucumis sativus] >KGN60773.1 hypothetical protein Csa_019433 [Cucumis sativus]) HSP 1 Score: 556.6 bits (1433), Expect = 1.6e-154 Identity = 264/289 (91.35%), Postives = 273/289 (94.46%), Query Frame = 0
BLAST of Clc02G17950 vs. NCBI nr
Match: TYJ97899.1 (methyltransferase-like protein 6 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 554.7 bits (1428), Expect = 5.9e-154 Identity = 264/289 (91.35%), Postives = 271/289 (93.77%), Query Frame = 0
BLAST of Clc02G17950 vs. NCBI nr
Match: XP_008456399.1 (PREDICTED: methyltransferase-like protein 6 isoform X1 [Cucumis melo]) HSP 1 Score: 553.5 bits (1425), Expect = 1.3e-153 Identity = 264/289 (91.35%), Postives = 271/289 (93.77%), Query Frame = 0
BLAST of Clc02G17950 vs. NCBI nr
Match: KAA0063572.1 (methyltransferase-like protein 6 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 552.7 bits (1423), Expect = 2.2e-153 Identity = 263/284 (92.61%), Postives = 269/284 (94.72%), Query Frame = 0
BLAST of Clc02G17950 vs. ExPASy Swiss-Prot
Match: Q6AXU8 (tRNA N(3)-methylcytidine methyltransferase METTL6 OS=Rattus norvegicus OX=10116 GN=Mettl6 PE=2 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 3.6e-29 Identity = 91/243 (37.45%), Postives = 121/243 (49.79%), Query Frame = 0
BLAST of Clc02G17950 vs. ExPASy Swiss-Prot
Match: Q8BVH9 (tRNA N(3)-methylcytidine methyltransferase METTL6 OS=Mus musculus OX=10090 GN=Mettl6 PE=1 SV=2) HSP 1 Score: 129.4 bits (324), Expect = 8.0e-29 Identity = 90/243 (37.04%), Postives = 121/243 (49.79%), Query Frame = 0
BLAST of Clc02G17950 vs. ExPASy Swiss-Prot
Match: Q8TCB7 (tRNA N(3)-methylcytidine methyltransferase METTL6 OS=Homo sapiens OX=9606 GN=METTL6 PE=1 SV=2) HSP 1 Score: 127.5 bits (319), Expect = 3.1e-28 Identity = 85/242 (35.12%), Postives = 117/242 (48.35%), Query Frame = 0
BLAST of Clc02G17950 vs. ExPASy Swiss-Prot
Match: Q5RDV8 (tRNA N(3)-methylcytidine methyltransferase METTL6 OS=Pongo abelii OX=9601 GN=METTL6 PE=2 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.7e-26 Identity = 84/242 (34.71%), Postives = 115/242 (47.52%), Query Frame = 0
BLAST of Clc02G17950 vs. ExPASy Swiss-Prot
Match: A8KBL7 (tRNA N(3)-methylcytidine methyltransferase METTL2 OS=Danio rerio OX=7955 GN=mettl2a PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 2.3e-23 Identity = 80/269 (29.74%), Postives = 119/269 (44.24%), Query Frame = 0
BLAST of Clc02G17950 vs. ExPASy TrEMBL
Match: A0A0A0LG62 (Methyltransferase-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G009600 PE=3 SV=1) HSP 1 Score: 556.6 bits (1433), Expect = 7.5e-155 Identity = 264/289 (91.35%), Postives = 273/289 (94.46%), Query Frame = 0
BLAST of Clc02G17950 vs. ExPASy TrEMBL
Match: A0A5D3BFS2 (Methyltransferase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G001150 PE=3 SV=1) HSP 1 Score: 554.7 bits (1428), Expect = 2.9e-154 Identity = 264/289 (91.35%), Postives = 271/289 (93.77%), Query Frame = 0
BLAST of Clc02G17950 vs. ExPASy TrEMBL
Match: A0A1S3C384 (Methyltransferase-like protein OS=Cucumis melo OX=3656 GN=LOC103496346 PE=3 SV=1) HSP 1 Score: 553.5 bits (1425), Expect = 6.4e-154 Identity = 264/289 (91.35%), Postives = 271/289 (93.77%), Query Frame = 0
BLAST of Clc02G17950 vs. ExPASy TrEMBL
Match: A0A5A7V5R0 (Methyltransferase-like protein 6 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G00820 PE=4 SV=1) HSP 1 Score: 552.7 bits (1423), Expect = 1.1e-153 Identity = 263/284 (92.61%), Postives = 269/284 (94.72%), Query Frame = 0
BLAST of Clc02G17950 vs. ExPASy TrEMBL
Match: A0A6J1G4K4 (Methyltransferase-like protein OS=Cucurbita moschata OX=3662 GN=LOC111450669 PE=3 SV=1) HSP 1 Score: 537.3 bits (1383), Expect = 4.7e-149 Identity = 254/289 (87.89%), Postives = 266/289 (92.04%), Query Frame = 0
BLAST of Clc02G17950 vs. TAIR 10
Match: AT1G54650.2 (Methyltransferase family protein ) HSP 1 Score: 336.7 bits (862), Expect = 2.4e-92 Identity = 176/287 (61.32%), Postives = 204/287 (71.08%), Query Frame = 0
BLAST of Clc02G17950 vs. TAIR 10
Match: AT1G54650.1 (Methyltransferase family protein ) HSP 1 Score: 334.0 bits (855), Expect = 1.5e-91 Identity = 175/287 (60.98%), Postives = 204/287 (71.08%), Query Frame = 0
BLAST of Clc02G17950 vs. TAIR 10
Match: AT2G26200.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 119.0 bits (297), Expect = 7.7e-27 Identity = 81/262 (30.92%), Postives = 118/262 (45.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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