Clc02G17115 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G17115
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	TIR-NBS-LRR disease resistance protein
Location	ClcChr02: 29597702 .. 29598193 (-)
RNA-Seq Expression	Clc02G17115
Synteny	Clc02G17115

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCGAGCAAGTGGATCATCTTCCTCACGTTTTGATGTGTTCTTAAGTTTTCGGGGAGAGGATACTCGATCCAACTTCACGAGTCATCTTAATATGGCTTTGCGTCAAAGAGGAATCAATGTCTTTATAGATAACAAGCTTTCGAGGGGTGAAGGAATTTCTGCATCTCTATTGGAAGCTATTGAAGAATCGAAAATCTCGATTGTTATAATCTCTGAAAATTATGCATCTTCGAGTTGGTGTTTGAATGAATTGGTGAAAATCGTTATGTGTAACAAATTAAGTGGACAAATAATTTTACCAGTTTTCTACAAAATGGACCCATCTCAAGTACGAAAACAAAGTGGAACATTTGGAGAAGAATTTGCCAAACTTGAAGTTAGATTCTTCAACAAGATGCAAGCATGGAGGGAAGCTCTGACTACTGTTTCCAATATGTCTGGATGGCCGCTTCTGCAAAAAAGAGTATTTCTTTCCATATCTTTCTAA

mRNA sequence

ATGAATCGAGCAAGTGGATCATCTTCCTCACGTTTTGATGTGTTCTTAAGTTTTCGGGGAGAGGATACTCGATCCAACTTCACGAGTCATCTTAATATGGCTTTGCGTCAAAGAGGAATCAATGTCTTTATAGATAACAAGCTTTCGAGGGGTGAAGGAATTTCTGCATCTCTATTGGAAGCTATTGAAGAATCGAAAATCTCGATTGTTATAATCTCTGAAAATTATGCATCTTCGAGTTGGTGTTTGAATGAATTGGTGAAAATCGTTATGTGTAACAAATTAAGTGGACAAATAATTTTACCAGTTTTCTACAAAATGGACCCATCTCAAGTACGAAAACAAAGTGGAACATTTGGAGAAGAATTTGCCAAACTTGAAGTTAGATTCTTCAACAAGATGCAAGCATGGAGGGAAGCTCTGACTACTGTTTCCAATATGTCTGGATGGCCGCTTCTGCAAAAAAGAGTATTTCTTTCCATATCTTTCTAA

Coding sequence (CDS)

ATGAATCGAGCAAGTGGATCATCTTCCTCACGTTTTGATGTGTTCTTAAGTTTTCGGGGAGAGGATACTCGATCCAACTTCACGAGTCATCTTAATATGGCTTTGCGTCAAAGAGGAATCAATGTCTTTATAGATAACAAGCTTTCGAGGGGTGAAGGAATTTCTGCATCTCTATTGGAAGCTATTGAAGAATCGAAAATCTCGATTGTTATAATCTCTGAAAATTATGCATCTTCGAGTTGGTGTTTGAATGAATTGGTGAAAATCGTTATGTGTAACAAATTAAGTGGACAAATAATTTTACCAGTTTTCTACAAAATGGACCCATCTCAAGTACGAAAACAAAGTGGAACATTTGGAGAAGAATTTGCCAAACTTGAAGTTAGATTCTTCAACAAGATGCAAGCATGGAGGGAAGCTCTGACTACTGTTTCCAATATGTCTGGATGGCCGCTTCTGCAAAAAAGAGTATTTCTTTCCATATCTTTCTAA

Protein sequence

MNRASGSSSSRFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNKLSRGEGISASLLEAIEESKISIVIISENYASSSWCLNELVKIVMCNKLSGQIILPVFYKMDPSQVRKQSGTFGEEFAKLEVRFFNKMQAWREALTTVSNMSGWPLLQKRVFLSISF

Homology

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BLAST of Clc02G17115 vs. NCBI nr
Match: XP_038889763.1 (disease resistance protein RPV1-like isoform X1 [Benincasa hispida] >XP_038889764.1 disease resistance protein RPV1-like isoform X1 [Benincasa hispida] >XP_038889765.1 disease resistance protein RPV1-like isoform X1 [Benincasa hispida] >XP_038889766.1 disease resistance protein RPV1-like isoform X1 [Benincasa hispida] >XP_038889768.1 disease resistance protein RPV1-like isoform X1 [Benincasa hispida] >XP_038889769.1 disease resistance protein RPV1-like isoform X1 [Benincasa hispida] >XP_038889770.1 disease resistance protein RPV1-like isoform X1 [Benincasa hispida] >XP_038889771.1 disease resistance protein RPV1-like isoform X1 [Benincasa hispida] >XP_038889772.1 disease resistance protein RPV1-like isoform X1 [Benincasa hispida] >XP_038889773.1 disease resistance protein RPV1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 264.2 bits (674), Expect = 7.3e-67
Identity = 135/156 (86.54%), Postives = 143/156 (91.67%), Query Frame = 0


Query: 1   MNRASGSSSSR----FDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNKLSRGEGISA 60
           M+RA+GSS S     FDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNKLSRGE IS 
Sbjct: 1   MDRAAGSSCSHFKWSFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNKLSRGEEIST 60

Query: 61  SLLEAIEESKISIVIISENYASSSWCLNELVKIVMCNKLSGQIILPVFYKMDPSQVRKQS 120
           SLLEAIEESKISIVIISENYASSSWCLNELVKI+MCNK  GQ++LPVFYK+DPSQVRKQS
Sbjct: 61  SLLEAIEESKISIVIISENYASSSWCLNELVKIIMCNKFGGQVVLPVFYKVDPSQVRKQS 120

Query: 121 GTFGEEFAKLEVRFFNKMQAWREALTTVSNMSGWPL 153
           G FGEEFAKLEVRFFNKMQ WREALTT+S+MSGW L
Sbjct: 121 GRFGEEFAKLEVRFFNKMQTWREALTTISHMSGWVL 156

[Close]

BLAST of Clc02G17115 vs. NCBI nr
Match: XP_038889774.1 (disease resistance protein RPV1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 264.2 bits (674), Expect = 7.3e-67
Identity = 135/156 (86.54%), Postives = 143/156 (91.67%), Query Frame = 0


Query: 1   MNRASGSSSSR----FDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNKLSRGEGISA 60
           M+RA+GSS S     FDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNKLSRGE IS 
Sbjct: 1   MDRAAGSSCSHFKWSFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNKLSRGEEIST 60

Query: 61  SLLEAIEESKISIVIISENYASSSWCLNELVKIVMCNKLSGQIILPVFYKMDPSQVRKQS 120
           SLLEAIEESKISIVIISENYASSSWCLNELVKI+MCNK  GQ++LPVFYK+DPSQVRKQS
Sbjct: 61  SLLEAIEESKISIVIISENYASSSWCLNELVKIIMCNKFGGQVVLPVFYKVDPSQVRKQS 120

Query: 121 GTFGEEFAKLEVRFFNKMQAWREALTTVSNMSGWPL 153
           G FGEEFAKLEVRFFNKMQ WREALTT+S+MSGW L
Sbjct: 121 GRFGEEFAKLEVRFFNKMQTWREALTTISHMSGWVL 156

[Close]

BLAST of Clc02G17115 vs. NCBI nr
Match: ADU33175.1 (putative TIR-NBS-LRR-AAA+ATPase [Cucumis sativus var. hardwickii])

HSP 1 Score: 258.1 bits (658), Expect = 5.2e-65
Identity = 131/160 (81.88%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 1   MNRASGSSSS-----RFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNKLSRGEGIS 60
           MN+A GSSSS      FDVFLSFRGEDTRSNFTSHLNM LRQRGINVFID KLSRGE I 
Sbjct: 1   MNQAGGSSSSSCFRWSFDVFLSFRGEDTRSNFTSHLNMTLRQRGINVFIDKKLSRGEEIC 60

Query: 61  ASLLEAIEESKISIVIISENYASSSWCLNELVKIVMCNKLSGQIILPVFYKMDPSQVRKQ 120
           ASLLEAIE SKISIV+ISE+YASSSWCLNELVKI+MCNKL GQ++LP+FYK+DPS+V KQ
Sbjct: 61  ASLLEAIEGSKISIVVISESYASSSWCLNELVKIIMCNKLRGQVVLPIFYKVDPSEVGKQ 120

Query: 121 SGTFGEEFAKLEVRFFNKMQAWREALTTVSNMSGWPLLQK 156
           SG FGEEFAKLEVRFFNKMQAW+EAL TVS+MSGWP+LQ+
Sbjct: 121 SGRFGEEFAKLEVRFFNKMQAWKEALITVSHMSGWPVLQR 160

[Close]

BLAST of Clc02G17115 vs. NCBI nr
Match: ADI99935.1 (TIR-NBS-LRR class resistance protein [Cucumis sativus] >ADU33174.1 putative TIR-NBS-LRR-AAA+ATPase [Cucumis sativus])

HSP 1 Score: 258.1 bits (658), Expect = 5.2e-65
Identity = 131/160 (81.88%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 1   MNRASGSSSS-----RFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNKLSRGEGIS 60
           MN+A GSSSS      FDVFLSFRGEDTRSNFTSHLNM LRQRGINVFID KLSRGE I 
Sbjct: 1   MNQAGGSSSSSCFRWSFDVFLSFRGEDTRSNFTSHLNMTLRQRGINVFIDKKLSRGEEIC 60

Query: 61  ASLLEAIEESKISIVIISENYASSSWCLNELVKIVMCNKLSGQIILPVFYKMDPSQVRKQ 120
           ASLLEAIE SKISIV+ISE+YASSSWCLNELVKI+MCNKL GQ++LP+FYK+DPS+V KQ
Sbjct: 61  ASLLEAIEGSKISIVVISESYASSSWCLNELVKIIMCNKLRGQVVLPIFYKVDPSEVGKQ 120

Query: 121 SGTFGEEFAKLEVRFFNKMQAWREALTTVSNMSGWPLLQK 156
           SG FGEEFAKLEVRFFNKMQAW+EAL TVS+MSGWP+LQ+
Sbjct: 121 SGRFGEEFAKLEVRFFNKMQAWKEALITVSHMSGWPVLQR 160

[Close]

BLAST of Clc02G17115 vs. NCBI nr
Match: XP_011650107.2 (TMV resistance protein N [Cucumis sativus] >KGN60913.2 hypothetical protein Csa_023436 [Cucumis sativus])

HSP 1 Score: 258.1 bits (658), Expect = 5.2e-65
Identity = 131/160 (81.88%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 1   MNRASGSSSS-----RFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNKLSRGEGIS 60
           MN+A GSSSS      FDVFLSFRGEDTRSNFTSHLNM LRQRGINVFID KLSRGE I 
Sbjct: 1   MNQAGGSSSSSCFRWSFDVFLSFRGEDTRSNFTSHLNMTLRQRGINVFIDKKLSRGEEIC 60

Query: 61  ASLLEAIEESKISIVIISENYASSSWCLNELVKIVMCNKLSGQIILPVFYKMDPSQVRKQ 120
           ASLLEAIE SKISIV+ISE+YASSSWCLNELVKI+MCNKL GQ++LP+FYK+DPS+V KQ
Sbjct: 61  ASLLEAIEGSKISIVVISESYASSSWCLNELVKIIMCNKLRGQVVLPIFYKVDPSEVGKQ 120

Query: 121 SGTFGEEFAKLEVRFFNKMQAWREALTTVSNMSGWPLLQK 156
           SG FGEEFAKLEVRFFNKMQAW+EAL TVS+MSGWP+LQ+
Sbjct: 121 SGRFGEEFAKLEVRFFNKMQAWKEALITVSHMSGWPVLQR 160

[Close]

BLAST of Clc02G17115 vs. ExPASy Swiss-Prot
Match: V9M2S5 (Disease resistance protein RPV1 OS=Vitis rotundifolia OX=103349 GN=RPV1 PE=1 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.3e-42
Identity = 90/161 (55.90%), Postives = 112/161 (69.57%), Query Frame = 0


Query: 3   RASGSSS-------SRFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNKLSRGEGIS 62
           RAS SSS       + +DVFLSFRGEDTR NFT HL  AL +RGI  F D++L RGE I+
Sbjct: 8   RASSSSSTPSIPRTTTYDVFLSFRGEDTRYNFTDHLYSALGRRGIRTFRDDRLRRGEAIA 67

Query: 63  ASLLEAIEESKISIVIISENYASSSWCLNELVKIVMCNKLSGQIILPVFYKMDPSQVRKQ 122
             LL+AIEES+ S+++ SENYA S WCL+ELVKI+ C K  G  + P+FY +DPS VRKQ
Sbjct: 68  PELLKAIEESRSSVIVFSENYAHSRWCLDELVKIMECQKDLGHAVFPIFYHVDPSHVRKQ 127

Query: 123 SGTFGEEFAKLEVRFFNKMQAWREALTTVSNMSGWPLLQKR 157
            G+FGE FA  E  + +K+  WR ALT  +N+SGW LL  R
Sbjct: 128 EGSFGEAFAGYEENWKDKIPRWRTALTEAANLSGWHLLDDR 168

[Close]

BLAST of Clc02G17115 vs. ExPASy Swiss-Prot
Match: V9M398 (Disease resistance protein RUN1 OS=Vitis rotundifolia OX=103349 GN=RUN1 PE=1 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 7.1e-41
Identity = 90/164 (54.88%), Postives = 111/164 (67.68%), Query Frame = 0


Query: 2   NRASGSSSS----------RFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNKLSRG 61
           +RAS SSSS           +DVFLSFRGEDTR NFT HL  AL +RGI  F D+KL RG
Sbjct: 7   SRASSSSSSSSTPSIPRTITYDVFLSFRGEDTRFNFTDHLYSALGRRGIRTFRDDKLRRG 66

Query: 62  EGISASLLEAIEESKISIVIISENYASSSWCLNELVKIVMCNKLS---GQIILPVFYKMD 121
           E I+  LL+AIEES+ S+++ SENYA S WCL+ELVKI+ C+K     G  + P+FY +D
Sbjct: 67  EAIAPELLKAIEESRSSVIVFSENYARSRWCLDELVKIMECHKDKKDPGHAVFPIFYHVD 126

Query: 122 PSQVRKQSGTFGEEFAKLEVRFFNKMQAWREALTTVSNMSGWPL 153
           PS VRKQ G+FGE FA       +K+  WR ALT  +N+SGWPL
Sbjct: 127 PSHVRKQEGSFGEAFAGYGENLKDKIPRWRTALTEAANLSGWPL 170

[Close]

BLAST of Clc02G17115 vs. ExPASy Swiss-Prot
Match: Q9SZ66 (Disease resistance-like protein DSC1 OS=Arabidopsis thaliana OX=3702 GN=DSC1 PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.4e-33
Identity = 74/151 (49.01%), Postives = 106/151 (70.20%), Query Frame = 0


Query: 4   ASGSSSSRFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNKLSRGEGISASLLEAIE 63
           +S  SS+ FDVFLSFRG DTR+NFT HL  ALR RGI+ FID++L RG+ ++A L + IE
Sbjct: 3   SSSPSSAEFDVFLSFRGFDTRNNFTGHLQKALRLRGIDSFIDDRLRRGDNLTA-LFDRIE 62

Query: 64  ESKISIVIISENYASSSWCLNELVKIVMCNKLSGQIILPVFYKMDPSQVRKQSGTFGEEF 123
           +SKI+I++ S NYA+S+WCL ELVKI+ C   + Q+++P+FYK+D S V KQ  +F   F
Sbjct: 63  KSKIAIIVFSTNYANSAWCLRELVKILECRNSNQQLVVPIFYKVDKSDVEKQRNSFAVPF 122

Query: 124 AKLEVRF----FNKMQAWREALTTVSNMSGW 151
              E+ F      ++ +W+ AL + SN+ G+
Sbjct: 123 KLPELTFPGVTPEEISSWKAALASASNILGY 152

[Close]

BLAST of Clc02G17115 vs. ExPASy Swiss-Prot
Match: A0A290U7C4 (Disease resistance protein Roq1 OS=Nicotiana benthamiana OX=4100 GN=ROQ1 PE=1 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 5.5e-33
Identity = 77/156 (49.36%), Postives = 106/156 (67.95%), Query Frame = 0


Query: 1   MNRASGSSSSRFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNK-LSRGEGISASLL 60
           M  +S      +DVFLSFRGEDTR  F  HL  AL ++GI+ F+D+K L RG+ IS+ L+
Sbjct: 1   MLTSSSHHGRSYDVFLSFRGEDTRKTFVGHLFNALIEKGIHTFMDDKELKRGKSISSELM 60

Query: 61  EAIEESKISIVIISENYASSSWCLNELVKIVMCNKLSGQIILPVFYKMDPSQVRKQSGTF 120
           +AI ES+ ++V+ S+NYASS+WCL ELVKI+  ++    I++PVFY +DPS VRKQ+G +
Sbjct: 61  KAIGESRFAVVVFSKNYASSTWCLEELVKILEIHEKFELIVVPVFYDVDPSTVRKQNGEY 120

Query: 121 GEEFAKLEVRFF---NKMQAWREALTTVSNMSGWPL 153
              F K E       +K+  WREALT V+N+SG  L
Sbjct: 121 AVCFTKFEANLVDDRDKVLRWREALTKVANISGHDL 156

[Close]

BLAST of Clc02G17115 vs. ExPASy Swiss-Prot
Match: F4JNA9 (Disease resistance protein RPP4 OS=Arabidopsis thaliana OX=3702 GN=RPP4 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.7e-32
Identity = 77/147 (52.38%), Postives = 102/147 (69.39%), Query Frame = 0


Query: 4   ASGSSSSRFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNKLSRGEGISASLLEAIE 63
           +S  SS R+DVF SF G D R  F SHL  AL +R IN F+D+ + R   I+ +L+ AI 
Sbjct: 5   SSSPSSRRYDVFPSFSGVDVRKTFLSHLIEALDRRSINTFMDHGIVRSCIIADALITAIR 64

Query: 64  ESKISIVIISENYASSSWCLNELVKIVMCNKLSGQIILPVFYKMDPSQVRKQSGTFGEEF 123
           E++ISIVI SENYASS+WCLNELV+I  C K   Q+++PVFY +DPS VRKQ G FG+ F
Sbjct: 65  EARISIVIFSENYASSTWCLNELVEIHKCYKKGEQMVIPVFYGVDPSHVRKQIGGFGDVF 124

Query: 124 AK-LEVRFFNKMQAWREALTTVSNMSG 150
            K  E +  ++ Q W +ALT +SN++G
Sbjct: 125 KKTCEDKPEDQKQRWVKALTDISNLAG 151

[Close]

BLAST of Clc02G17115 vs. ExPASy TrEMBL
Match: D9I8I5 (Putative TIR-NBS-LRR-AAA+ATPase OS=Cucumis sativus OX=3659 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.5e-65
Identity = 131/160 (81.88%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 1   MNRASGSSSS-----RFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNKLSRGEGIS 60
           MN+A GSSSS      FDVFLSFRGEDTRSNFTSHLNM LRQRGINVFID KLSRGE I 
Sbjct: 1   MNQAGGSSSSSCFRWSFDVFLSFRGEDTRSNFTSHLNMTLRQRGINVFIDKKLSRGEEIC 60

Query: 61  ASLLEAIEESKISIVIISENYASSSWCLNELVKIVMCNKLSGQIILPVFYKMDPSQVRKQ 120
           ASLLEAIE SKISIV+ISE+YASSSWCLNELVKI+MCNKL GQ++LP+FYK+DPS+V KQ
Sbjct: 61  ASLLEAIEGSKISIVVISESYASSSWCLNELVKIIMCNKLRGQVVLPIFYKVDPSEVGKQ 120

Query: 121 SGTFGEEFAKLEVRFFNKMQAWREALTTVSNMSGWPLLQK 156
           SG FGEEFAKLEVRFFNKMQAW+EAL TVS+MSGWP+LQ+
Sbjct: 121 SGRFGEEFAKLEVRFFNKMQAWKEALITVSHMSGWPVLQR 160

[Close]

BLAST of Clc02G17115 vs. ExPASy TrEMBL
Match: E7CHD0 (Putative TIR-NBS-LRR-AAA+ATPase OS=Cucumis sativus var. hardwickii OX=319220 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.5e-65
Identity = 131/160 (81.88%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 1   MNRASGSSSS-----RFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNKLSRGEGIS 60
           MN+A GSSSS      FDVFLSFRGEDTRSNFTSHLNM LRQRGINVFID KLSRGE I 
Sbjct: 1   MNQAGGSSSSSCFRWSFDVFLSFRGEDTRSNFTSHLNMTLRQRGINVFIDKKLSRGEEIC 60

Query: 61  ASLLEAIEESKISIVIISENYASSSWCLNELVKIVMCNKLSGQIILPVFYKMDPSQVRKQ 120
           ASLLEAIE SKISIV+ISE+YASSSWCLNELVKI+MCNKL GQ++LP+FYK+DPS+V KQ
Sbjct: 61  ASLLEAIEGSKISIVVISESYASSSWCLNELVKIIMCNKLRGQVVLPIFYKVDPSEVGKQ 120

Query: 121 SGTFGEEFAKLEVRFFNKMQAWREALTTVSNMSGWPLLQK 156
           SG FGEEFAKLEVRFFNKMQAW+EAL TVS+MSGWP+LQ+
Sbjct: 121 SGRFGEEFAKLEVRFFNKMQAWKEALITVSHMSGWPVLQR 160

[Close]

BLAST of Clc02G17115 vs. ExPASy TrEMBL
Match: A0A0A0LGB6 (TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G021540 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.5e-65
Identity = 131/160 (81.88%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 1   MNRASGSSSS-----RFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNKLSRGEGIS 60
           MN+A GSSSS      FDVFLSFRGEDTRSNFTSHLNM LRQRGINVFID KLSRGE I 
Sbjct: 1   MNQAGGSSSSSCFRWSFDVFLSFRGEDTRSNFTSHLNMTLRQRGINVFIDKKLSRGEEIC 60

Query: 61  ASLLEAIEESKISIVIISENYASSSWCLNELVKIVMCNKLSGQIILPVFYKMDPSQVRKQ 120
           ASLLEAIE SKISIV+ISE+YASSSWCLNELVKI+MCNKL GQ++LP+FYK+DPS+V KQ
Sbjct: 61  ASLLEAIEGSKISIVVISESYASSSWCLNELVKIIMCNKLRGQVVLPIFYKVDPSEVGKQ 120

Query: 121 SGTFGEEFAKLEVRFFNKMQAWREALTTVSNMSGWPLLQK 156
           SG FGEEFAKLEVRFFNKMQAW+EAL TVS+MSGWP+LQ+
Sbjct: 121 SGRFGEEFAKLEVRFFNKMQAWKEALITVSHMSGWPVLQR 160

[Close]

BLAST of Clc02G17115 vs. ExPASy TrEMBL
Match: A0A0A0LJK8 (TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G075330 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.1e-64
Identity = 133/161 (82.61%), Postives = 146/161 (90.68%), Query Frame = 0


Query: 1   MNRASGSSSS-----RFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNKLSRGEGIS 60
           MN+ASGSSSS      FDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNKLSRGE IS
Sbjct: 1   MNQASGSSSSSRFRWHFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNKLSRGEEIS 60

Query: 61  ASLLEAIEESKISIVIISENYASSSWCLNELVKIVMCNKLSGQIILPVFYKMDPSQVRKQ 120
           ASLLEAIE SKISIVIISENYASS WCLNELVKI+MCNKL GQ++LP+FYK+DPS+VRKQ
Sbjct: 61  ASLLEAIEGSKISIVIISENYASSRWCLNELVKIIMCNKLRGQVVLPIFYKVDPSEVRKQ 120

Query: 121 SGTFGEEFAKLEVRFFN-KMQAWREALTTVSNMSGWPLLQK 156
           SG FGEEFAKLEVRF + KMQAWREA+ +VS+MSGWP+ +K
Sbjct: 121 SGKFGEEFAKLEVRFSSEKMQAWREAMISVSHMSGWPVPKK 161

[Close]

BLAST of Clc02G17115 vs. ExPASy TrEMBL
Match: A0A0A0LFP7 (TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G021510 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.1e-63
Identity = 127/160 (79.38%), Postives = 145/160 (90.62%), Query Frame = 0


Query: 1   MNRASGSSSS-----RFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNKLSRGEGIS 60
           M+RASGSSSS      FDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDN++SRG+ IS
Sbjct: 1   MDRASGSSSSSCFRWTFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNRISRGQEIS 60

Query: 61  ASLLEAIEESKISIVIISENYASSSWCLNELVKIVMCNKLSGQIILPVFYKMDPSQVRKQ 120
           ASL EAIEESKISIVIIS+NYASSSWCLNELVKI+MC +L GQ++LP+FYK++PSQVRKQ
Sbjct: 61  ASLFEAIEESKISIVIISQNYASSSWCLNELVKIIMCKELRGQVVLPIFYKVNPSQVRKQ 120

Query: 121 SGTFGEEFAKLEVRFFNKMQAWREALTTVSNMSGWPLLQK 156
           +G FGE FA+LEVRFF+KMQAW EALT VS+MSGW +L+K
Sbjct: 121 NGAFGEAFAELEVRFFDKMQAWGEALTAVSHMSGWVVLEK 160

[Close]

BLAST of Clc02G17115 vs. TAIR 10
Match: AT5G46450.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 146.7 bits (369), Expect = 1.6e-35
Identity = 76/151 (50.33%), Postives = 105/151 (69.54%), Query Frame = 0


Query: 4   ASGSSSSR---FDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNKLSRGEGISASLLE 63
           AS SSSSR   +DVF SF GED R  F SH    L ++ I  F DN++ R + I+  L+E
Sbjct: 2   ASSSSSSRNWSYDVFPSFSGEDVRKTFLSHFLRELERKSIITFKDNEMERSQSIAPELVE 61

Query: 64  AIEESKISIVIISENYASSSWCLNELVKIVMCNKLSGQIILPVFYKMDPSQVRKQSGTFG 123
           AI++S+I++++ S+NYASSSWCLNEL++I+ CNK  GQ ++PVFY +DPS +RKQSG FG
Sbjct: 62  AIKDSRIAVIVFSKNYASSSWCLNELLEIMRCNKYLGQQVIPVFYYLDPSHLRKQSGEFG 121

Query: 124 EEFAK-LEVRFFNKMQAWREALTTVSNMSGW 151
           E F K  + +       W++ALT VSN+ G+
Sbjct: 122 EAFKKTCQNQTEEVKNQWKQALTDVSNILGY 152

[Close]

BLAST of Clc02G17115 vs. TAIR 10
Match: AT4G12010.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 144.1 bits (362), Expect = 1.0e-34
Identity = 74/151 (49.01%), Postives = 106/151 (70.20%), Query Frame = 0


Query: 4   ASGSSSSRFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNKLSRGEGISASLLEAIE 63
           +S  SS+ FDVFLSFRG DTR+NFT HL  ALR RGI+ FID++L RG+ ++A L + IE
Sbjct: 3   SSSPSSAEFDVFLSFRGFDTRNNFTGHLQKALRLRGIDSFIDDRLRRGDNLTA-LFDRIE 62

Query: 64  ESKISIVIISENYASSSWCLNELVKIVMCNKLSGQIILPVFYKMDPSQVRKQSGTFGEEF 123
           +SKI+I++ S NYA+S+WCL ELVKI+ C   + Q+++P+FYK+D S V KQ  +F   F
Sbjct: 63  KSKIAIIVFSTNYANSAWCLRELVKILECRNSNQQLVVPIFYKVDKSDVEKQRNSFAVPF 122

Query: 124 AKLEVRF----FNKMQAWREALTTVSNMSGW 151
              E+ F      ++ +W+ AL + SN+ G+
Sbjct: 123 KLPELTFPGVTPEEISSWKAALASASNILGY 152

[Close]

BLAST of Clc02G17115 vs. TAIR 10
Match: AT4G16920.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 141.0 bits (354), Expect = 8.7e-34
Identity = 75/146 (51.37%), Postives = 103/146 (70.55%), Query Frame = 0


Query: 5   SGSSSSRFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNKLSRGEGISASLLEAIEE 64
           + +SSS  D+F SF GED R NF SHL   L +R IN F+D+ + R   I+ +L+ AI E
Sbjct: 2   AAASSSGSDIFPSFSGEDVRKNFLSHLLKQLNRRSINTFMDHVIERSCIIADALISAIRE 61

Query: 65  SKISIVIISENYASSSWCLNELVKIVMCNKLSGQIILPVFYKMDPSQVRKQSGTFGEEFA 124
           ++ISIVI S+NYA+S+WCLNELV+I  C+K  GQ ++PVFY +DPS VRKQ G FG+ F 
Sbjct: 62  ARISIVIFSKNYAASTWCLNELVEIDNCSKYFGQKVIPVFYDVDPSHVRKQIGEFGKVFK 121

Query: 125 K-LEVRFFNKMQAWREALTTVSNMSG 150
           K  E +  ++ Q W +ALT +SN++G
Sbjct: 122 KTCEDKPADQKQRWVKALTDISNIAG 147

[Close]

BLAST of Clc02G17115 vs. TAIR 10
Match: AT4G16860.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 139.8 bits (351), Expect = 1.9e-33
Identity = 77/147 (52.38%), Postives = 102/147 (69.39%), Query Frame = 0


Query: 4   ASGSSSSRFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNKLSRGEGISASLLEAIE 63
           +S  SS R+DVF SF G D R  F SHL  AL +R IN F+D+ + R   I+ +L+ AI 
Sbjct: 5   SSSPSSRRYDVFPSFSGVDVRKTFLSHLIEALDRRSINTFMDHGIVRSCIIADALITAIR 64

Query: 64  ESKISIVIISENYASSSWCLNELVKIVMCNKLSGQIILPVFYKMDPSQVRKQSGTFGEEF 123
           E++ISIVI SENYASS+WCLNELV+I  C K   Q+++PVFY +DPS VRKQ G FG+ F
Sbjct: 65  EARISIVIFSENYASSTWCLNELVEIHKCYKKGEQMVIPVFYGVDPSHVRKQIGGFGDVF 124

Query: 124 AK-LEVRFFNKMQAWREALTTVSNMSG 150
            K  E +  ++ Q W +ALT +SN++G
Sbjct: 125 KKTCEDKPEDQKQRWVKALTDISNLAG 151

[Close]

BLAST of Clc02G17115 vs. TAIR 10
Match: AT4G11170.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 139.8 bits (351), Expect = 1.9e-33
Identity = 76/151 (50.33%), Postives = 97/151 (64.24%), Query Frame = 0


Query: 4   ASGSSSSRFDVFLSFRGEDTRSNFTSHLNMALRQRGINVFIDNKLSRGEGISASLLEAIE 63
           +S S+S R+DVF SFRGED R+NF SHL      +GI  F D+ + R   I   L  AI 
Sbjct: 3   SSSSNSWRYDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDDHIKRSHTIGHELRAAIR 62

Query: 64  ESKISIVIISENYASSSWCLNELVKIVMCNKLSGQIILPVFYKMDPSQVRKQSGTFGEEF 123
           ESKIS+V+ SENYASSSWCL+EL++I+ C +  G  ++PVFYK+DPS +RKQ+G FG  F
Sbjct: 63  ESKISVVLFSENYASSSWCLDELIEIMKCKEEQGLKVMPVFYKVDPSDIRKQTGKFGMSF 122

Query: 124 -----AKLEVRFFNKMQAWREALTTVSNMSG 150
                 K E R  N    WR ALT  +N+ G
Sbjct: 123 LETCCGKTEERQHN----WRRALTDAANILG 149

The following BLAST results are available for this feature:

BLAST of Clc02G17115 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889763.1	7.3e-67	86.54	disease resistance protein RPV1-like isoform X1 [Benincasa hispida] >XP_03888976...	[more]
XP_038889774.1	7.3e-67	86.54	disease resistance protein RPV1-like isoform X2 [Benincasa hispida]	[more]
ADU33175.1	5.2e-65	81.88	putative TIR-NBS-LRR-AAA+ATPase [Cucumis sativus var. hardwickii]	[more]
ADI99935.1	5.2e-65	81.88	TIR-NBS-LRR class resistance protein [Cucumis sativus] >ADU33174.1 putative TIR-...	[more]
XP_011650107.2	5.2e-65	81.88	TMV resistance protein N [Cucumis sativus] >KGN60913.2 hypothetical protein Csa_...	[more]

BLAST of Clc02G17115 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
V9M2S5	1.3e-42	55.90	Disease resistance protein RPV1 OS=Vitis rotundifolia OX=103349 GN=RPV1 PE=1 SV=...	[more]
V9M398	7.1e-41	54.88	Disease resistance protein RUN1 OS=Vitis rotundifolia OX=103349 GN=RUN1 PE=1 SV=...	[more]
Q9SZ66	1.4e-33	49.01	Disease resistance-like protein DSC1 OS=Arabidopsis thaliana OX=3702 GN=DSC1 PE=...	[more]
A0A290U7C4	5.5e-33	49.36	Disease resistance protein Roq1 OS=Nicotiana benthamiana OX=4100 GN=ROQ1 PE=1 SV...	[more]
F4JNA9	2.7e-32	52.38	Disease resistance protein RPP4 OS=Arabidopsis thaliana OX=3702 GN=RPP4 PE=1 SV=...	[more]

BLAST of Clc02G17115 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
D9I8I5	2.5e-65	81.88	Putative TIR-NBS-LRR-AAA+ATPase OS=Cucumis sativus OX=3659 PE=4 SV=1	[more]
E7CHD0	2.5e-65	81.88	Putative TIR-NBS-LRR-AAA+ATPase OS=Cucumis sativus var. hardwickii OX=319220 PE=...	[more]
A0A0A0LGB6	2.5e-65	81.88	TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G021540 PE=4 SV...	[more]
A0A0A0LJK8	2.1e-64	82.61	TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G075330 PE=4 SV...	[more]
A0A0A0LFP7	3.1e-63	79.38	TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G021510 PE=4 SV...	[more]

BLAST of Clc02G17115 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G46450.1	1.6e-35	50.33	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT4G12010.1	1.0e-34	49.01	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT4G16920.1	8.7e-34	51.37	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT4G16860.1	1.9e-33	52.38	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT4G11170.1	1.9e-33	50.33	Disease resistance protein (TIR-NBS-LRR class) family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	SMART	SM00255	till_3	coord: 11..147 e-value: 4.1E-49 score: 179.1
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PFAM	PF01582	TIR	coord: 12..145 e-value: 9.8E-47 score: 159.0
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PROSITE	PS50104	TIR	coord: 10..163 score: 35.74231
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	GENE3D	3.40.50.10140		coord: 5..161 e-value: 9.6E-66 score: 222.8
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	SUPERFAMILY	52200	Toll/Interleukin receptor TIR domain	coord: 5..150
None	No IPR available	PANTHER	PTHR32009:SF60	TOLL/INTERLEUKIN-1 RECEPTOR-LIKE PROTEIN	coord: 7..154
None	No IPR available	PANTHER	PTHR32009	TMV RESISTANCE PROTEIN N-LIKE	coord: 7..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G17115.1	Clc02G17115.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0007165	signal transduction
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0043531	ADP binding
molecular_function	GO:0003953	NAD+ nucleosidase activity