Clc02G17070 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G17070
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein
Location	ClcChr02: 29563432 .. 29567889 (+)
RNA-Seq Expression	Clc02G17070
Synteny	Clc02G17070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATATTCATGAGTGTCTGGACCTGTTTATGAGTAAATCGACTAATTTCATGGGACAACCTGTCTGACCCTACAACATTTGGTAGGTAGGTGACTACTATGGATTGAACCTTTGATTACTTAGTCATTTACTGAGACTATGTCTCCTTTTTACCATTAGACCAACATGGTTTATTTAGCACAACATATACCGCTTTGGAGCATGGAGATTTGAACATCACACTTTAGAATTATTTGAACCTCAATTGCTAGGGATTTTCTTTTTTAAAATTATTTTTAAGAGACCATTACTAGTGAACTATGGTTACCTTCAAAGGTTGAAAAAAAAGATGAAAGAGACAGAGCATAAAGTTGGGATGGGGAAGATTTGAGTTACCTTGTCACAGTTATGCCCTTTGATTGCGCTGCCCTTATGAAAAAAAGAAAAAATTTGCAAAGAAATACCTTTTCCTATACAAGGGAAGCCTTTGGATGATGAAATTTACAAGCTTGCTTGTGATTAAAATAATCCTACACCCACATGACATAACTGCCTTCTGTTTCTTTCATTGGATATGAAATCTATCCTCATTTCCCCATGGCCATTCCTCTTTCTTTATGCCTCCACCCTCCAAACCCTCAGCAAAACCCCACCTCCGCCGTCCCTCCAGCCACCACCGTCAGCTTTCCGGTTTCTACTGCTTTGAATTCCAAATCCAAGAGGCAATTCATCCTCAAAACAGCTTCACTCTCTCTAATTTCTTTCATTCCAAAATGCCCACTTGTTCAATCTTCTGAAAATTCTCCAACTTTCAAACCAGGCCTTCCTGGCATAGCAAACACCAAGTCTTGGTTTCAGTTCTATGGCGATGGCTTTTCCATTCGGGTGCCTCCTCAGTTTGAAGATCTCACGGAGCCTGAGGTATACACAAAAGCACCCCTGATGTTTGATCTCTATGAAGTGAACACTGTTTATCTCAGCCTTTTCTACTTTCTTCTTCAACTTAGTTCTGTTTGTTTAATGCTTGTATTGTAAATTATCTTTACTTCCACCAATATGAATAGTTTAAGGTTATCAACGGTTAAGGATTGTCCTCTGTAGTTGGGGCCCTTTCTTTTACTTGTAAAAGGTTTATCATTTGCAGCTTGCTAAGTTATGTGCTTGGAATTTGTAGGATTATAGTGCTGGACTCTCTCTTTATGGAGATAAGGCTAAAACAAAAACCTTTGCAGCACGGTTCGGGTCTCCTGATGGGTAATGACATTCCCTTTTGTTCATATTGTTTGTTCTAGCTTGTATTTCGCTTCTAGTTAGGATGAAGAATTTGAGTTAGGTTAATTGACCTAGGTATACTAAAGTTGTGCCTTTGTAAAAAGTTCAATTGTTTTTGTGAACTTTCTCATATATTCATCTTCTTGTATCCTTTGCTGCTTTGTTGGTTAACACAGCTCTGAAGTTCTAAGTGTTGTCACTCGTCCGACGAATCAACTTAAGATCACCTTTCTAGAGGTAGCACAATGATGGTTGTGAAGTTTTCAAGTCTTATGACCAAAATGCCCAACATTCATTTTGTAATGCATCCAACTGGCTCTCTGATACCTGTCTTCTTTTTCCTAATCATTTGGTTATTCAAAAGGGGATTGACTTCTTACTAAACAATTTATATCTCGCAATTTTTTCTAAGCTTGGTGGCTCTTTCATGCCAAGAAGCTGTACCTAGAGAAAATTCCAAAACGAGGTCTTAAAATGTTTATTGGTTTTGGATCCTTTAGGTCCGAGAGAATTCCTTACTGTTAATCTGAGCTTCCCAAGGAGGTTTTTGAAGTTGCTCATCACAAACTTTTATAAGAAGATTTCGTTTAGTTCTAACTCCTATGTTCATGCTTATTTAGTTATATTTATATTTTATGGACAACTGTTTTAGGAGATTCCATTCTTACTTGCAAAAAACAGGCGAAAGATATAACTGATATAGGTTCCTTGAGGGAGGCTGCAAAAATCTTTGTTCCAGGTACACATTGGCTTTCTATTTCATGCATTCTTGGTTCAATATACAAAGTAACTTTTTTTGTGGTTTTTTCTGGTCATTTTGGTTTTTAATTATTTGGTTCTTTTGCTATTTTCTTATCTGCCCTTAGCTACACATTTCACATTTCTTTCTAACTATTGATTTTGGTGTTCTGGTAATGATAGGTGGTTCAACTCTATTTTCCGCCCGAACATTTAAAATTAAGGAAGATGAAGGTTTCAGGTAATTATGCTACCAAGGTGCCGTTTGTATATACAAAACGTTTGATTGATCTTATGCACGATCATAATATTCTTTGTTAGTTCATATAGATATTACATGTCATGTCTTCACTGAGTATATGTTGCATTTTAATATAAAGCTCCTTGATATGTGAACGACTATGATATAAGATAATTTTTTTATCCTAGAAACTTCTGAAATTTGTTATGAAACAAATACTGTGAGTTGATGATGATGTTGTGGTCAATAAGAGCCAATGTACATAATAAAAGGCTTAGATCAAATGAGTTCAAGTGATGGTAGCTATCTACCTAACATTTAATATTGTATGAGTTTTCATGGTAACCAGGTATGACAGGAGGTAGGTTAGACAATTGTTAGGTGAGAATAGTAAAGTTGAAGTATGTGCAAACTGTTCTAGACACTTGAGAATATAAAAAATGTTATGAAATAATAATGTTGATCAAAATTAAGCAGCTGGGAATAATTCTTTCTAGTCTTCTTTGGCTATATCAACTTTCATATTTTCATTCCGTTGCCACTGTTTCTTTAAATTCAGGACTTATTACTTCTACGAGTTTGGGAAGAACGATCAACACGTTGCATTAGTAGCAACTGTTAATAGTGGACAGGTTCGTGATATACAATTTATAGTACACATACTAAGGGTGTGTTTGGAATACATTTTCAAGTGTTTAATTTAAAAAATAAGTCATTTTGAAAAAAAATTGGAGTGTTTGGCAATCACTAAAATGGATTTTGAAGTGTATTCTAAACAATTTTTATCAAAAGAGTTTAAATAAAAATGAGTTTTTTTGATAAACACTTTTTTCTTAAGTCAATCACAAACACTTCTTACTATGATGAAGACCTGAGTTATAAAATGGTAGAATTTGTATAAATAAGAATTGATTCAAAGCTAAATTGTTCATGTTAACAAAGTCTTATTAATTGATACGTTGAATATGCCAAACATAACTTTAGAATTCCGAGTTCTGCTCGAGGATTATGTAGGTCGTTCAAGCTTTGTTTTGACATTGTGCTTCTTTGTGGTAGGTGTTTGTTGCTGGAGCAACTGCACCATTGTCCAAATGGGATGAAGATGGCATAAAACTCCGTTCTGCTGCTATATCTCTAACAGTGCTATGATCAATTGTTGATAAAGTTCATTTCATTAGCTTGTGAGTACTCCCTAAAACTTAAAACTCCCATGAATTGGATAGCATATTAAATCAAGGTTAAATTATTGCTTTTTTATGAAATTTGAAAATTCGTGTATTTAGTCTGCAAACTTTTAAAAATTATTATTTATGTTCCTAAACTTTTGAGTTTTGATGATGCGCTTTTACTTGGCCGCCACAATAAAAACCATTAACGAAGTGCCAATGTGACATGCTCCTAACATTAGCATTTTGTTAACAACATCAATTATGAGGCCTATTTAAAAGCATGAGAGATGGGACCTAAACCATTTTTTTTTAAAAAAAAAAAAAAATTCAAGAACTAAATTATCGTAATGTTTAATATCTAGGGACTACAATCTTGGTTACGCTGTAAAATCACTAGCTCTTTTTGTAACTATGATCTTAGTTTGATCTTGTTGCATTGTATGTATTGGAGTCCCTTCTGGGTCTTCTTTATTCCTTGTTGGGATAGTATTTATTTTATTTATTGTTTTGGATTCCCTTGGACGTTCTTCCATTTCTCTAAATGAAAGCTGGGTTTGTTACAAATATATATATATATATATATACATCCTAGTGATATGAATTAAAGTTAGCTCTTTCCTATGCAAATACTGGTATGATTTTAAATGCTGAGCTTGGTCTACAGATTGTTTTAACTTAATTTGTGAGGTTACTTGATTGTGAGTGATCCGTCAATGTTTTTAATGGACAGGAGGAAGCTTGTGGTGAGTTTCCCAAAAGAGACAACTCCAGCTCGACATAAAATTAAGGCTGTGTACAGAGAGACTCCCACATTTTGTTTTTTGTAAGAATGGTAGTTTGTAGTGGCTATGTTGAGTGTGAGTTATGCTGGGTTCATGTGGTTTTTCATTTCATCATTCCCTTTGTTTCTATATGATTAATCTCAAACTAAAACTTGAGATTATTGGAATTGGTGACCGTCACAATGAGACTATCACTCATTGAATGTATCCCTTTTTCTTTTTCTTTTAGCTGAAATTTCATACAACACATCACTTTACAAGTTGGTTTGTCCATTGAA

mRNA sequence

GATATTCATGAGTGTCTGGACCTGTTTATGAGTAAATCGACTAATTTCATGGGACAACCTGTCTGACCCTACAACATTTGGTAGGTAGGTGACTACTATGGATTGAACCTTTGATTACTTAGTCATTTACTGAGACTATGTCTCCTTTTTACCATTAGACCAACATGGTTTATTTAGCACAACATATACCGCTTTGGAGCATGGAGATTTGAACATCACACTTTAGAATTATTTGAACCTCAATTGCTAGGGATTTTCTTTTTTAAAATTATTTTTAAGAGACCATTACTAGTGAACTATGGTTACCTTCAAAGGTTGAAAAAAAAGATGAAAGAGACAGAGCATAAAGTTGGGATGGGGAAGATTTGAGTTACCTTGTCACAGTTATGCCCTTTGATTGCGCTGCCCTTATGAAAAAAAGAAAAAATTTGCAAAGAAATACCTTTTCCTATACAAGGGAAGCCTTTGGATGATGAAATTTACAAGCTTGCTTGTGATTAAAATAATCCTACACCCACATGACATAACTGCCTTCTGTTTCTTTCATTGGATATGAAATCTATCCTCATTTCCCCATGGCCATTCCTCTTTCTTTATGCCTCCACCCTCCAAACCCTCAGCAAAACCCCACCTCCGCCGTCCCTCCAGCCACCACCGTCAGCTTTCCGGTTTCTACTGCTTTGAATTCCAAATCCAAGAGGCAATTCATCCTCAAAACAGCTTCACTCTCTCTAATTTCTTTCATTCCAAAATGCCCACTTGTTCAATCTTCTGAAAATTCTCCAACTTTCAAACCAGGCCTTCCTGGCATAGCAAACACCAAGTCTTGGTTTCAGTTCTATGGCGATGGCTTTTCCATTCGGGTGCCTCCTCAGTTTGAAGATCTCACGGAGCCTGAGGATTATAGTGCTGGACTCTCTCTTTATGGAGATAAGGCTAAAACAAAAACCTTTGCAGCACGGTTCGGGTCTCCTGATGGCTCTGAAGTTCTAAGTGTTGTCACTCGTCCGACGAATCAACTTAAGATCACCTTTCTAGAGGCGAAAGATATAACTGATATAGGTTCCTTGAGGGAGGCTGCAAAAATCTTTGTTCCAGGTGGTTCAACTCTATTTTCCGCCCGAACATTTAAAATTAAGGAAGATGAAGGTTTCAGGACTTATTACTTCTACGAGTTTGGGAAGAACGATCAACACGTTGCATTAGTAGCAACTGTTAATAGTGGACAGGTGTTTGTTGCTGGAGCAACTGCACCATTGTCCAAATGGGATGAAGATGGCATAAAACTCCGTTCTGCTGCTATATCTCTAACAGTGCTATGATCAATTGTTGATAAAGTTCATTTCATTAGCTTGAGGAAGCTTGTGGTGAGTTTCCCAAAAGAGACAACTCCAGCTCGACATAAAATTAAGGCTGTGTACAGAGAGACTCCCACATTTTGTTTTTTGTAAGAATGGTAGTTTGTAGTGGCTATGTTGAGTGTGAGTTATGCTGGGTTCATGTGGTTTTTCATTTCATCATTCCCTTTGTTTCTATATGATTAATCTCAAACTAAAACTTGAGATTATTGGAATTGGTGACCGTCACAATGAGACTATCACTCATTGAATGTATCCCTTTTTCTTTTTCTTTTAGCTGAAATTTCATACAACACATCACTTTACAAGTTGGTTTGTCCATTGAA

Coding sequence (CDS)

ATGGCCATTCCTCTTTCTTTATGCCTCCACCCTCCAAACCCTCAGCAAAACCCCACCTCCGCCGTCCCTCCAGCCACCACCGTCAGCTTTCCGGTTTCTACTGCTTTGAATTCCAAATCCAAGAGGCAATTCATCCTCAAAACAGCTTCACTCTCTCTAATTTCTTTCATTCCAAAATGCCCACTTGTTCAATCTTCTGAAAATTCTCCAACTTTCAAACCAGGCCTTCCTGGCATAGCAAACACCAAGTCTTGGTTTCAGTTCTATGGCGATGGCTTTTCCATTCGGGTGCCTCCTCAGTTTGAAGATCTCACGGAGCCTGAGGATTATAGTGCTGGACTCTCTCTTTATGGAGATAAGGCTAAAACAAAAACCTTTGCAGCACGGTTCGGGTCTCCTGATGGCTCTGAAGTTCTAAGTGTTGTCACTCGTCCGACGAATCAACTTAAGATCACCTTTCTAGAGGCGAAAGATATAACTGATATAGGTTCCTTGAGGGAGGCTGCAAAAATCTTTGTTCCAGGTGGTTCAACTCTATTTTCCGCCCGAACATTTAAAATTAAGGAAGATGAAGGTTTCAGGACTTATTACTTCTACGAGTTTGGGAAGAACGATCAACACGTTGCATTAGTAGCAACTGTTAATAGTGGACAGGTGTTTGTTGCTGGAGCAACTGCACCATTGTCCAAATGGGATGAAGATGGCATAAAACTCCGTTCTGCTGCTATATCTCTAACAGTGCTATGA

Protein sequence

MAIPLSLCLHPPNPQQNPTSAVPPATTVSFPVSTALNSKSKRQFILKTASLSLISFIPKCPLVQSSENSPTFKPGLPGIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGDKAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTLFSARTFKIKEDEGFRTYYFYEFGKNDQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLRSAAISLTVL

Homology

[Close]

BLAST of Clc02G17070 vs. NCBI nr
Match: XP_038877737.1 (uncharacterized protein LOC120069965 [Benincasa hispida] >XP_038877739.1 uncharacterized protein LOC120069965 [Benincasa hispida])

HSP 1 Score: 465.3 bits (1196), Expect = 3.3e-127
Identity = 234/248 (94.35%), Postives = 240/248 (96.77%), Query Frame = 0


Query: 1   MAIPLSLCLHPPNPQQNPTSAVPPATTVSFPVSTALNSKSKRQFILKTASLSLISFIPKC 60
           MAIPLSL LHP NPQQNPTSAVPPATT+SFP ST+LNSKSKR FILK+ASL LIS  PKC
Sbjct: 1   MAIPLSLSLHPSNPQQNPTSAVPPATTLSFPASTSLNSKSKRHFILKSASLCLISLFPKC 60

Query: 61  PLVQSSENSPTFKPGLPGIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGDK 120
           P+VQSSENSPT KPGLPGIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGDK
Sbjct: 61  PVVQSSENSPTSKPGLPGIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGDK 120

Query: 121 AKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTLF 180
           AKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTLF
Sbjct: 121 AKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTLF 180

Query: 181 SARTFKIKEDEGFRTYYFYEFGKNDQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLRS 240
           SARTFKIKEDEGFRTYYFYEFGK++QHVALVATVNSGQVFVAGATAPLSKWDEDGIKLRS
Sbjct: 181 SARTFKIKEDEGFRTYYFYEFGKDEQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLRS 240

Query: 241 AAISLTVL 249
           AAISLTVL
Sbjct: 241 AAISLTVL 248

[Close]

BLAST of Clc02G17070 vs. NCBI nr
Match: XP_008455075.1 (PREDICTED: uncharacterized protein LOC103495336 isoform X1 [Cucumis melo] >KAA0063676.1 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein isoform 1 [Cucumis melo var. makuwa] >TYK18351.1 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 463.0 bits (1190), Expect = 1.6e-126
Identity = 234/249 (93.98%), Postives = 238/249 (95.58%), Query Frame = 0


Query: 1   MAIPLSLCL-HPPNPQQNPTSAVPPATTVSFPVSTALNSKSKRQFILKTASLSLISFIPK 60
           MAIPLSLCL HPPNP QNPTSAVPP TTV FP S+ LNS+SKR FILKTASL LISF PK
Sbjct: 1   MAIPLSLCLHHPPNPHQNPTSAVPPPTTVCFPASSTLNSQSKRHFILKTASLCLISFFPK 60

Query: 61  CPLVQSSENSPTFKPGLPGIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD 120
           CP+VQSSENSPT KPGLP IANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD
Sbjct: 61  CPVVQSSENSPTSKPGLPAIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD 120

Query: 121 KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL 180
           KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL
Sbjct: 121 KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL 180

Query: 181 FSARTFKIKEDEGFRTYYFYEFGKNDQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR 240
           FSARTFKIKEDEGFRTYYFYEFGKN+QHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR
Sbjct: 181 FSARTFKIKEDEGFRTYYFYEFGKNEQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR 240

Query: 241 SAAISLTVL 249
           SAAISLTVL
Sbjct: 241 SAAISLTVL 249

[Close]

BLAST of Clc02G17070 vs. NCBI nr
Match: XP_004139199.1 (uncharacterized protein LOC101214471 isoform X1 [Cucumis sativus])

HSP 1 Score: 462.2 bits (1188), Expect = 2.8e-126
Identity = 233/249 (93.57%), Postives = 238/249 (95.58%), Query Frame = 0


Query: 1   MAIPLSLCL-HPPNPQQNPTSAVPPATTVSFPVSTALNSKSKRQFILKTASLSLISFIPK 60
           MAIPLSLC+ HPPNP QNPTS VPP TT+ FP  T+LNSKSKR FILKTASL LISFIPK
Sbjct: 1   MAIPLSLCIHHPPNPHQNPTSPVPPPTTLCFPAPTSLNSKSKRHFILKTASLCLISFIPK 60

Query: 61  CPLVQSSENSPTFKPGLPGIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD 120
           CP+VQSSENSPT KPGLP IANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD
Sbjct: 61  CPVVQSSENSPTSKPGLPAIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD 120

Query: 121 KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL 180
           KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL
Sbjct: 121 KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL 180

Query: 181 FSARTFKIKEDEGFRTYYFYEFGKNDQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR 240
           FSARTFKIKEDEGFRTYYFYEFGKN+QHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR
Sbjct: 181 FSARTFKIKEDEGFRTYYFYEFGKNEQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR 240

Query: 241 SAAISLTVL 249
           SAAISLTVL
Sbjct: 241 SAAISLTVL 249

[Close]

BLAST of Clc02G17070 vs. NCBI nr
Match: KAE8651582.1 (hypothetical protein Csa_023470 [Cucumis sativus])

HSP 1 Score: 462.2 bits (1188), Expect = 2.8e-126
Identity = 233/249 (93.57%), Postives = 238/249 (95.58%), Query Frame = 0


Query: 1   MAIPLSLCL-HPPNPQQNPTSAVPPATTVSFPVSTALNSKSKRQFILKTASLSLISFIPK 60
           MAIPLSLC+ HPPNP QNPTS VPP TT+ FP  T+LNSKSKR FILKTASL LISFIPK
Sbjct: 29  MAIPLSLCIHHPPNPHQNPTSPVPPPTTLCFPAPTSLNSKSKRHFILKTASLCLISFIPK 88

Query: 61  CPLVQSSENSPTFKPGLPGIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD 120
           CP+VQSSENSPT KPGLP IANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD
Sbjct: 89  CPVVQSSENSPTSKPGLPAIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD 148

Query: 121 KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL 180
           KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL
Sbjct: 149 KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL 208

Query: 181 FSARTFKIKEDEGFRTYYFYEFGKNDQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR 240
           FSARTFKIKEDEGFRTYYFYEFGKN+QHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR
Sbjct: 209 FSARTFKIKEDEGFRTYYFYEFGKNEQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR 268

Query: 241 SAAISLTVL 249
           SAAISLTVL
Sbjct: 269 SAAISLTVL 277

[Close]

BLAST of Clc02G17070 vs. NCBI nr
Match: XP_023521934.1 (uncharacterized protein LOC111785779 [Cucurbita pepo subsp. pepo] >XP_023521935.1 uncharacterized protein LOC111785779 [Cucurbita pepo subsp. pepo] >XP_023545472.1 uncharacterized protein LOC111804892 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545473.1 uncharacterized protein LOC111804892 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545474.1 uncharacterized protein LOC111804892 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545475.1 uncharacterized protein LOC111804892 isoform X1 [Cucurbita pepo subsp. pepo] >KAG6599268.1 hypothetical protein SDJN03_09046, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 434.5 bits (1116), Expect = 6.2e-118
Identity = 218/248 (87.90%), Postives = 230/248 (92.74%), Query Frame = 0


Query: 1   MAIPLSLCLHPPNPQQNPTSAVPPATTVSFPVSTALNSKSKRQFILKTASLSLISFIPKC 60
           MA+ LSLCLHPPN QQNPT+AVP  TTV F   T+LNS SKR FILKTASL LIS IPKC
Sbjct: 1   MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTSLNSNSKRHFILKTASLCLISLIPKC 60

Query: 61  PLVQSSENSPTFKPGLPGIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGDK 120
           P+ QSS+ SPT K GLPG+ANTKSWFQFYGDGFSIRVPPQFEDLTEPED++AGLSLYGDK
Sbjct: 61  PVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDK 120

Query: 121 AKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTLF 180
            KTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGG+TLF
Sbjct: 121 VKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLF 180

Query: 181 SARTFKIKEDEGFRTYYFYEFGKNDQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLRS 240
           SARTFKIK+DEGFRTYYFYEFGKN++HVALVATVNSGQ FVAGATAPLSKWDEDGIKLRS
Sbjct: 181 SARTFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSKWDEDGIKLRS 240

Query: 241 AAISLTVL 249
           AAISLTVL
Sbjct: 241 AAISLTVL 248

[Close]

BLAST of Clc02G17070 vs. ExPASy TrEMBL
Match: A0A5A7VB73 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00660 PE=4 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 7.9e-127
Identity = 234/249 (93.98%), Postives = 238/249 (95.58%), Query Frame = 0


Query: 1   MAIPLSLCL-HPPNPQQNPTSAVPPATTVSFPVSTALNSKSKRQFILKTASLSLISFIPK 60
           MAIPLSLCL HPPNP QNPTSAVPP TTV FP S+ LNS+SKR FILKTASL LISF PK
Sbjct: 1   MAIPLSLCLHHPPNPHQNPTSAVPPPTTVCFPASSTLNSQSKRHFILKTASLCLISFFPK 60

Query: 61  CPLVQSSENSPTFKPGLPGIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD 120
           CP+VQSSENSPT KPGLP IANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD
Sbjct: 61  CPVVQSSENSPTSKPGLPAIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD 120

Query: 121 KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL 180
           KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL
Sbjct: 121 KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL 180

Query: 181 FSARTFKIKEDEGFRTYYFYEFGKNDQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR 240
           FSARTFKIKEDEGFRTYYFYEFGKN+QHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR
Sbjct: 181 FSARTFKIKEDEGFRTYYFYEFGKNEQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR 240

Query: 241 SAAISLTVL 249
           SAAISLTVL
Sbjct: 241 SAAISLTVL 249

[Close]

BLAST of Clc02G17070 vs. ExPASy TrEMBL
Match: A0A1S3C1A2 (uncharacterized protein LOC103495336 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495336 PE=4 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 7.9e-127
Identity = 234/249 (93.98%), Postives = 238/249 (95.58%), Query Frame = 0


Query: 1   MAIPLSLCL-HPPNPQQNPTSAVPPATTVSFPVSTALNSKSKRQFILKTASLSLISFIPK 60
           MAIPLSLCL HPPNP QNPTSAVPP TTV FP S+ LNS+SKR FILKTASL LISF PK
Sbjct: 1   MAIPLSLCLHHPPNPHQNPTSAVPPPTTVCFPASSTLNSQSKRHFILKTASLCLISFFPK 60

Query: 61  CPLVQSSENSPTFKPGLPGIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD 120
           CP+VQSSENSPT KPGLP IANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD
Sbjct: 61  CPVVQSSENSPTSKPGLPAIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD 120

Query: 121 KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL 180
           KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL
Sbjct: 121 KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL 180

Query: 181 FSARTFKIKEDEGFRTYYFYEFGKNDQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR 240
           FSARTFKIKEDEGFRTYYFYEFGKN+QHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR
Sbjct: 181 FSARTFKIKEDEGFRTYYFYEFGKNEQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR 240

Query: 241 SAAISLTVL 249
           SAAISLTVL
Sbjct: 241 SAAISLTVL 249

[Close]

BLAST of Clc02G17070 vs. ExPASy TrEMBL
Match: A0A0A0LJH6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G020900 PE=4 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 1.3e-126
Identity = 233/249 (93.57%), Postives = 238/249 (95.58%), Query Frame = 0


Query: 1   MAIPLSLCL-HPPNPQQNPTSAVPPATTVSFPVSTALNSKSKRQFILKTASLSLISFIPK 60
           MAIPLSLC+ HPPNP QNPTS VPP TT+ FP  T+LNSKSKR FILKTASL LISFIPK
Sbjct: 1   MAIPLSLCIHHPPNPHQNPTSPVPPPTTLCFPAPTSLNSKSKRHFILKTASLCLISFIPK 60

Query: 61  CPLVQSSENSPTFKPGLPGIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD 120
           CP+VQSSENSPT KPGLP IANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD
Sbjct: 61  CPVVQSSENSPTSKPGLPAIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGD 120

Query: 121 KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL 180
           KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL
Sbjct: 121 KAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTL 180

Query: 181 FSARTFKIKEDEGFRTYYFYEFGKNDQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR 240
           FSARTFKIKEDEGFRTYYFYEFGKN+QHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR
Sbjct: 181 FSARTFKIKEDEGFRTYYFYEFGKNEQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLR 240

Query: 241 SAAISLTVL 249
           SAAISLTVL
Sbjct: 241 SAAISLTVL 249

[Close]

BLAST of Clc02G17070 vs. ExPASy TrEMBL
Match: A0A6J1G382 (uncharacterized protein LOC111450417 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450417 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 3.9e-118
Identity = 218/248 (87.90%), Postives = 229/248 (92.34%), Query Frame = 0


Query: 1   MAIPLSLCLHPPNPQQNPTSAVPPATTVSFPVSTALNSKSKRQFILKTASLSLISFIPKC 60
           MA+ LSLCLHPPN QQNPT+AVP  TTV F   T LNS SKR FILKTASL LIS IPKC
Sbjct: 1   MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKC 60

Query: 61  PLVQSSENSPTFKPGLPGIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGDK 120
           P+ QSS+ SPT K GLPG+ANTKSWFQFYGDGFSIRVPPQFEDLTEPED++AGLSLYGDK
Sbjct: 61  PVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDFNAGLSLYGDK 120

Query: 121 AKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTLF 180
            KTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGG+TLF
Sbjct: 121 VKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLF 180

Query: 181 SARTFKIKEDEGFRTYYFYEFGKNDQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLRS 240
           SARTFKIK+DEGFRTYYFYEFGKN++HVALVATVNSGQ FVAGATAPLSKWDEDGIKLRS
Sbjct: 181 SARTFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAFVAGATAPLSKWDEDGIKLRS 240

Query: 241 AAISLTVL 249
           AAISLTVL
Sbjct: 241 AAISLTVL 248

[Close]

BLAST of Clc02G17070 vs. ExPASy TrEMBL
Match: A0A6J1DCP5 (uncharacterized protein LOC111018879 OS=Momordica charantia OX=3673 GN=LOC111018879 PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 1.1e-117
Identity = 218/248 (87.90%), Postives = 226/248 (91.13%), Query Frame = 0


Query: 1   MAIPLSLCLHPPNPQQNPTSAVPPATTVSFPVSTALNSKSKRQFILKTASLSLISFIPKC 60
           MA+ LS CLHPPNP QNPTSA P    V FP STALN +SKR FILKTASL LIS IPKC
Sbjct: 1   MALLLSHCLHPPNPPQNPTSAFPRQAAVGFPESTALNPQSKRHFILKTASLCLISLIPKC 60

Query: 61  PLVQSSENSPTFKPGLPGIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGDK 120
           P+ +SSE SP  KPGLPGIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGDK
Sbjct: 61  PVARSSETSPNSKPGLPGIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLYGDK 120

Query: 121 AKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGSTLF 180
           AKTKTFAARF SPDGSEV+SVVTRPTNQLKITFLEAKDI+DIGSLREAAKIFVPGG+TLF
Sbjct: 121 AKTKTFAARFESPDGSEVVSVVTRPTNQLKITFLEAKDISDIGSLREAAKIFVPGGATLF 180

Query: 181 SARTFKIKEDEGFRTYYFYEFGKNDQHVALVATVNSGQVFVAGATAPLSKWDEDGIKLRS 240
           SARTFKIKEDEGFRTYYFYEFGK +QHVALVATVNSGQ FVAGATAP SKWDEDGIKLRS
Sbjct: 181 SARTFKIKEDEGFRTYYFYEFGKGEQHVALVATVNSGQAFVAGATAPRSKWDEDGIKLRS 240

Query: 241 AAISLTVL 249
           AAISLTVL
Sbjct: 241 AAISLTVL 248

[Close]

BLAST of Clc02G17070 vs. TAIR 10
Match: AT5G27390.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein )

HSP 1 Score: 292.7 bits (748), Expect = 2.7e-79
Identity = 152/251 (60.56%), Postives = 196/251 (78.09%), Query Frame = 0


Query: 1   MAIPL-SLCLHPPNPQ-QNPTSAVPPATTVSFPVSTALNSKSKRQFILKTASLSLISFIP 60
           MAI L SL LHPPNP+ QNP      +++ +F          +R  +L+TASL  +SFI 
Sbjct: 1   MAILLHSLSLHPPNPKPQNPYKPKILSSSATF----------RRDVVLRTASLCFVSFIF 60

Query: 61  KCPLVQS-SENSPTFKPGLPGIANTKSWFQFYGDGFSIRVPPQFEDLTEPEDYSAGLSLY 120
           +  + +S ++   + KP   GIANTKSWFQ++G GF+IRVPP FED+ EPEDYSAGLSLY
Sbjct: 61  QNQIPESLADPLKSTKPLRLGIANTKSWFQYFGSGFAIRVPPDFEDVNEPEDYSAGLSLY 120

Query: 121 GDKAKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGS 180
           GDKAK +TFAARF +PDGSEVLSVV RP+NQLKITFLEAKDI+D+GSL+ AA++FVPG +
Sbjct: 121 GDKAKPQTFAARFQTPDGSEVLSVVIRPSNQLKITFLEAKDISDLGSLKAAARLFVPGAA 180

Query: 181 TLFSARTFKIKEDEGFRTYYFYEFGKNDQHVALVATVNSGQVFVAGATAPLSKWDEDGIK 240
           T++SART K+KE+EG R YYFYEFG++++ +ALVA+VN G+V++AGA AP SKW +D +K
Sbjct: 181 TIYSARTIKVKEEEGLRNYYFYEFGRDEERIALVASVNRGKVYIAGAAAPESKWKDDELK 240

Query: 241 LRSAAISLTVL 249
           LRSAAIS T+L
Sbjct: 241 LRSAAISFTIL 241

The following BLAST results are available for this feature:

BLAST of Clc02G17070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877737.1	3.3e-127	94.35	uncharacterized protein LOC120069965 [Benincasa hispida] >XP_038877739.1 unchara...	[more]
XP_008455075.1	1.6e-126	93.98	PREDICTED: uncharacterized protein LOC103495336 isoform X1 [Cucumis melo] >KAA00...	[more]
XP_004139199.1	2.8e-126	93.57	uncharacterized protein LOC101214471 isoform X1 [Cucumis sativus]	[more]
KAE8651582.1	2.8e-126	93.57	hypothetical protein Csa_023470 [Cucumis sativus]	[more]
XP_023521934.1	6.2e-118	87.90	uncharacterized protein LOC111785779 [Cucurbita pepo subsp. pepo] >XP_023521935....	[more]

BLAST of Clc02G17070 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc02G17070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VB73	7.9e-127	93.98	Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein isofor...	[more]
A0A1S3C1A2	7.9e-127	93.98	uncharacterized protein LOC103495336 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LJH6	1.3e-126	93.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G020900 PE=4 SV=1	[more]
A0A6J1G382	3.9e-118	87.90	uncharacterized protein LOC111450417 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1DCP5	1.1e-117	87.90	uncharacterized protein LOC111018879 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of Clc02G17070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G27390.1	2.7e-79	60.56	Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.1000.10	Mog1/PsbP, alpha/beta/alpha sandwich	coord: 76..247 e-value: 1.5E-15 score: 59.5
None	No IPR available	PANTHER	PTHR37764	KETOSE/ALDOSE ISOMERASE, PUTATIVE (MOG1/PSBP/DUF1795-LIKE PHOTOSYSTEM II REACTION CENTER PSBP FAMILY PROTEIN)-RELATED	coord: 2..248
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	55724	Mog1p/PsbP-like	coord: 84..247

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G17070.1	Clc02G17070.1	mRNA