Clc02G15080 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G15080
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	GRAM domain-containing protein
Location	ClcChr02: 27652853 .. 27654179 (-)
RNA-Seq Expression	Clc02G15080
Synteny	Clc02G15080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGAAGAAAGAAGCTTGTTGTCTGTAGCTCAAGTTCAATGATAAGAGAGCTTGGAAGAAAAGGTTACAGTTTTGTTAATGGAATCCTGGAACATGGTAAACATTAATTGCTTTTTTCTTCGTTTGAGAAAGAATCTCTCTCTCTCTCAATTTTACTTTCTTTCCTAGCTGATTATGATGAAATGATGGATTGAATTGGATTGTCCTCTTTGTTTATTTAGAAACTTTCATTTTCTGAACATGAAATTCATATTCGAATAACAAATGCAAAAATCCCTCCTAACAATTGTTGTATGTCAGTCGATCAGAACATGATTCAACTAGTTAAAACAAACATTACTCCAAACCAAAAACGAAAGCATTACGTAAATATCTTTCTAGGTAAACGGAGATTGACATTGTTTTTTCCTGCATTAATAACAACTTATAAATCAAAAACTAAACTCAATTCGAAGGATTAAAAATGCTTAACTTACATTGGAATGACGATGTGCAGTTAAACTGTCGCCAAACATCGCCAAAACCGTTAAGGGGAAACTGTGGTTGGGGACGAAACTTGTTCAGCTTGGAGGAAGTGAGAAGATTTTTCGGAAGATGTTCAATCTCAGACAAGGAGACAAGTTGTTGGGTTCAGCACATTGTTATTTGTCAACCACAGCAGGTCCCATAGCAGGTCTCCTCTTTGTCTCCACCCATGTAGTTGCTTTCTGCAGTGACAGACCAATCATAATTTCCTCTCCACAAGGAGAACTAGGCAGATTGTTTTACAAAGTATATCATACTCCCTTCCTTCAACATTTACATTTGACTGGTTCCCTCTCTCTCTCTCCTGGTTGCTAACTAAGTTTTTTCTACAATGCTTATTTTATCAGGTTATGGTCCCAGTGAAGAAGGTGGAGAGAGTTAACCGAAGAAACAATATAAGCAATCCATCAAAGAAGTACATTCAAGTGGTGACTGTGGATCATTTTGACTTCTGGTTTATGGGTTTTTTGAATTATGAGAAAGCATTAAAGTTCCTCCAAAAGGGGGTTTCTAAGGATTGAGAAGATTGGCCTGAGAGACCTAAAGGAAGTGCCATCCCAGGAAAGTTATGGACATTGTAAAGGTTCTATTGGTTATGGAAATATAACTCATCTGAAAACATCAGATATTCTCAACTTTGTCAGTATATTAACTCCAGCTTTGATCAATCCTACACTATAGTGATAGAATACACAAATCATTCAAACTAAAACAACAAAAAACATAGATTATACAGACACCAAGGGGTTTGTTTTAGGTGTG

mRNA sequence

TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGAAGAAAGAAGCTTGTTGTCTGTAGCTCAAGTTCAATGATAAGAGAGCTTGGAAGAAAAGGTTACAGTTTTGTTAATGGAATCCTGGAACATGTTAAACTGTCGCCAAACATCGCCAAAACCGTTAAGGGGAAACTGTGGTTGGGGACGAAACTTGTTCAGCTTGGAGGAAGTGAGAAGATTTTTCGGAAGATGTTCAATCTCAGACAAGGAGACAAGTTGTTGGGTTCAGCACATTGTTATTTGTCAACCACAGCAGGTCCCATAGCAGGTCTCCTCTTTGTCTCCACCCATGTAGTTGCTTTCTGCAGTGACAGACCAATCATAATTTCCTCTCCACAAGGAGAACTAGGCAGATTGTTTTACAAAGTTATGGTCCCAGTGAAGAAGGTGGAGAGAGTTAACCGAAGAAACAATATAAGCAATCCATCAAAGAAGTACATTCAAGTGGTGACTGTGGATCATTTTGACTTCTGGTTTATGGGTTTTTTGAATTATGAGAAAGCATTAAAGTTCCTCCAAAAGGGGGTTTCTAAGGATTGAGAAGATTGGCCTGAGAGACCTAAAGGAAGTGCCATCCCAGGAAAGTTATGGACATTGTAAAGGTTCTATTGGTTATGGAAATATAACTCATCTGAAAACATCAGATATTCTCAACTTTGTCAGTATATTAACTCCAGCTTTGATCAATCCTACACTATAGTGATAGAATACACAAATCATTCAAACTAAAACAACAAAAAACATAGATTATACAGACACCAAGGGGTTTGTTTTAGGTGTG

Coding sequence (CDS)

ATGATAAGAGAGCTTGGAAGAAAAGGTTACAGTTTTGTTAATGGAATCCTGGAACATGTTAAACTGTCGCCAAACATCGCCAAAACCGTTAAGGGGAAACTGTGGTTGGGGACGAAACTTGTTCAGCTTGGAGGAAGTGAGAAGATTTTTCGGAAGATGTTCAATCTCAGACAAGGAGACAAGTTGTTGGGTTCAGCACATTGTTATTTGTCAACCACAGCAGGTCCCATAGCAGGTCTCCTCTTTGTCTCCACCCATGTAGTTGCTTTCTGCAGTGACAGACCAATCATAATTTCCTCTCCACAAGGAGAACTAGGCAGATTGTTTTACAAAGTTATGGTCCCAGTGAAGAAGGTGGAGAGAGTTAACCGAAGAAACAATATAAGCAATCCATCAAAGAAGTACATTCAAGTGGTGACTGTGGATCATTTTGACTTCTGGTTTATGGGTTTTTTGAATTATGAGAAAGCATTAAAGTTCCTCCAAAAGGGGGTTTCTAAGGATTGA

Protein sequence

MIRELGRKGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLVQLGGSEKIFRKMFNLRQGDKLLGSAHCYLSTTAGPIAGLLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMVPVKKVERVNRRNNISNPSKKYIQVVTVDHFDFWFMGFLNYEKALKFLQKGVSKD

Homology

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BLAST of Clc02G15080 vs. NCBI nr
Match: XP_008445893.1 (PREDICTED: GEM-like protein 4 [Cucumis melo])

HSP 1 Score: 308.1 bits (788), Expect = 4.5e-80
Identity = 147/168 (87.50%), Postives = 157/168 (93.45%), Query Frame = 0


Query: 1   MIRELGRKGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLVQLGGSEKIFRKMFNLRQGD 60
           MIRELGRKGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLVQ GGSEKIF KMFNL QGD
Sbjct: 1   MIRELGRKGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLVQFGGSEKIFHKMFNLEQGD 60

Query: 61  KLLGSAHCYLSTTAGPIAGLLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMVPVKKVE 120
           KLL SAHCYLSTTAGPIAGL+FVSTHVVAFCSDRPIIISSP GE+G++FYKVM+PV KV+
Sbjct: 61  KLLNSAHCYLSTTAGPIAGLVFVSTHVVAFCSDRPIIISSPHGEVGKVFYKVMIPVNKVK 120

Query: 121 RVNRRNNISNPSKKYIQVVTVDHFDFWFMGFLNYEKALKFLQKGVSKD 169
           RVN+RNN +NP+KKYIQVVTVD FDFWFMGFLNYEK  KF+QKGVS D
Sbjct: 121 RVNQRNNENNPAKKYIQVVTVDDFDFWFMGFLNYEKTFKFIQKGVSMD 168

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BLAST of Clc02G15080 vs. NCBI nr
Match: XP_038893009.1 (GEM-like protein 4 [Benincasa hispida])

HSP 1 Score: 304.7 bits (779), Expect = 5.0e-79
Identity = 150/165 (90.91%), Postives = 156/165 (94.55%), Query Frame = 0


Query: 1   MIRELGRKGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLVQLGGSEKIFRKMFNLRQGD 60
           MI ELGR+GY FVNGILEHVKLSPNIAKTVKGKLWLGTKLVQ  GSEKIF KMFNL+QGD
Sbjct: 1   MIGELGRRGYRFVNGILEHVKLSPNIAKTVKGKLWLGTKLVQF-GSEKIFHKMFNLKQGD 60

Query: 61  KLLGSAHCYLSTTAGPIAGLLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMVPVKKVE 120
           KLL SAHCYLST+AGPIAGLLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVM+PVKKV 
Sbjct: 61  KLLSSAHCYLSTSAGPIAGLLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMIPVKKVG 120

Query: 121 RVNRRNNISNPSKKYIQVVTVDHFDFWFMGFLNYEKALKFLQKGV 166
           RVN+RNN+SNPSKKYIQVVTVD FDFWFMGFLNYEKA KFLQKGV
Sbjct: 121 RVNQRNNVSNPSKKYIQVVTVDGFDFWFMGFLNYEKAFKFLQKGV 164

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BLAST of Clc02G15080 vs. NCBI nr
Match: XP_004147134.1 (GEM-like protein 4 [Cucumis sativus] >KGN51560.1 hypothetical protein Csa_008945 [Cucumis sativus])

HSP 1 Score: 302.8 bits (774), Expect = 1.9e-78
Identity = 142/168 (84.52%), Postives = 156/168 (92.86%), Query Frame = 0


Query: 1   MIRELGRKGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLVQLGGSEKIFRKMFNLRQGD 60
           MIRELGR+GYSFVNGILEHVKLSPNIAKTVKGKLWLGTKL+Q GGSE IF KMFNL  GD
Sbjct: 1   MIRELGRRGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLLQFGGSENIFHKMFNLEHGD 60

Query: 61  KLLGSAHCYLSTTAGPIAGLLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMVPVKKVE 120
           KLL SAHCYLSTTAGPIAGL+FVSTHVVAFCSDRPIIISSP GE+G++FYKVM+PV KV+
Sbjct: 61  KLLNSAHCYLSTTAGPIAGLIFVSTHVVAFCSDRPIIISSPHGEIGKIFYKVMIPVNKVK 120

Query: 121 RVNRRNNISNPSKKYIQVVTVDHFDFWFMGFLNYEKALKFLQKGVSKD 169
           RVN+RNN++NP+KKYIQVVTVD FDFWFMGFLN+EKA KF+Q GVS D
Sbjct: 121 RVNQRNNVNNPAKKYIQVVTVDDFDFWFMGFLNHEKAFKFIQNGVSVD 168

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BLAST of Clc02G15080 vs. NCBI nr
Match: XP_022139162.1 (putative GEM-like protein 8 [Momordica charantia])

HSP 1 Score: 284.3 bits (726), Expect = 7.0e-73
Identity = 136/168 (80.95%), Postives = 152/168 (90.48%), Query Frame = 0


Query: 1   MIRELGRKGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLVQLGGSEKIFRKMFNLRQGD 60
           MIR+LGRK  SFVNGIL+HVKLSPN+A+TVKGKLWL  KLVQ GGS KIF+K+FNLRQGD
Sbjct: 4   MIRKLGRKADSFVNGILDHVKLSPNVAETVKGKLWLVAKLVQFGGSGKIFQKLFNLRQGD 63

Query: 61  KLLGSAHCYLSTTAGPIAGLLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMVPVKKVE 120
           KLL S+HCYLSTTAGPIAGLLF+ST+ VAFCSDRPIII+SP GELGR  YKVM+PVKK++
Sbjct: 64  KLLSSSHCYLSTTAGPIAGLLFISTNAVAFCSDRPIIITSPHGELGRFNYKVMIPVKKMK 123

Query: 121 RVNRRNNISNPSKKYIQVVTVDHFDFWFMGFLNYEKALKFLQKGVSKD 169
           RVN+  N+SNPSKKYIQVVTVD FDFWFMGFLNY KA KFLQKGVS+D
Sbjct: 124 RVNQTENVSNPSKKYIQVVTVDDFDFWFMGFLNYGKAFKFLQKGVSED 171

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BLAST of Clc02G15080 vs. NCBI nr
Match: KAA0034080.1 (GEM-like protein 4 [Cucumis melo var. makuwa])

HSP 1 Score: 268.9 bits (686), Expect = 3.0e-68
Identity = 128/149 (85.91%), Postives = 138/149 (92.62%), Query Frame = 0


Query: 20  VKLSPNIAKTVKGKLWLGTKLVQLGGSEKIFRKMFNLRQGDKLLGSAHCYLSTTAGPIAG 79
           VKLSPNIAKTVKGKLWLGTKLVQ GGSEKIF KMFNL QGDKLL SAHCYLSTTAGPIAG
Sbjct: 6   VKLSPNIAKTVKGKLWLGTKLVQFGGSEKIFHKMFNLEQGDKLLNSAHCYLSTTAGPIAG 65

Query: 80  LLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMVPVKKVERVNRRNNISNPSKKYIQVV 139
           L+FVSTHVVAFCSDRPIIISSP GE+G++FYKVM+PV KV+RVN+RNN +NP+KKYIQVV
Sbjct: 66  LVFVSTHVVAFCSDRPIIISSPHGEVGKVFYKVMIPVNKVKRVNQRNNENNPAKKYIQVV 125

Query: 140 TVDHFDFWFMGFLNYEKALKFLQKGVSKD 169
           TVD FDFWFMGFLNYEK  KF+QKGVS D
Sbjct: 126 TVDDFDFWFMGFLNYEKTFKFIQKGVSMD 154

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BLAST of Clc02G15080 vs. ExPASy Swiss-Prot
Match: Q9FTA0 (GEM-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=At5g08350 PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.0e-46
Identity = 84/160 (52.50%), Postives = 120/160 (75.00%), Query Frame = 0


Query: 7   RKGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLVQLGGSEKIFRKMFNLRQGDKLLGSA 66
           +K   F NG+ +  K+ P + +TVK KL LG +++Q+GG EKIF+++F + +G+KL    
Sbjct: 54  KKTDGFTNGVRDQSKIRPKLTETVKRKLSLGARILQVGGLEKIFKRLFRVSEGEKLFKMY 113

Query: 67  HCYLSTTAGPIAGLLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMVPVKKVERVNRRN 126
            CYLSTTAGPIAGLLF+S+  +AFCS+R I + SPQG++ R+ YKV +P+ K++RVN+  
Sbjct: 114 QCYLSTTAGPIAGLLFISSKKMAFCSERSIKVDSPQGDIIRVHYKVSIPLCKIDRVNQSQ 173

Query: 127 NISNPSKKYIQVVTVDHFDFWFMGFLNYEKALKFLQKGVS 167
           N   PS+KY++VVTVD FDFWFMGFL+Y+KA   L+K +S
Sbjct: 174 NTKKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEKALS 213

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BLAST of Clc02G15080 vs. ExPASy Swiss-Prot
Match: Q9FMW4 (Putative GEM-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=At5g23370 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 3.4e-46
Identity = 84/160 (52.50%), Postives = 120/160 (75.00%), Query Frame = 0


Query: 7   RKGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLVQLGGSEKIFRKMFNLRQGDKLLGSA 66
           +K  SF NG+ +  KL P + +TVK KL LG +++Q+GG EKI++++F +   +KL  + 
Sbjct: 55  KKNDSFTNGVRDQDKLGPKLTETVKRKLSLGARILQMGGLEKIYKRLFKVSDEEKLFKAY 114

Query: 67  HCYLSTTAGPIAGLLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMVPVKKVERVNRRN 126
            CYLSTTAGPIAGLLF+S+  +AFCS+R I ++SPQGEL R+ YKV +P+ K+  VN+  
Sbjct: 115 QCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGELNRVHYKVSIPLCKINGVNQSQ 174

Query: 127 NISNPSKKYIQVVTVDHFDFWFMGFLNYEKALKFLQKGVS 167
           N + PS+KY++VVTVD FDFWFMGFL+Y+KA   L++ +S
Sbjct: 175 NTTKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEQALS 214

[Close]

BLAST of Clc02G15080 vs. ExPASy Swiss-Prot
Match: Q9FMW6 (GEM-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=At5g23350 PE=2 SV=2)

HSP 1 Score: 183.0 bits (463), Expect = 2.9e-45
Identity = 82/162 (50.62%), Postives = 119/162 (73.46%), Query Frame = 0


Query: 7   RKGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLVQLGGSEKIFRKMFNLRQGDKLLGSA 66
           +K  SF NG  +  KL P + +TVK KL LG K++Q+GG EKI++++F +   +KL  + 
Sbjct: 55  KKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDQEKLFKAY 114

Query: 67  HCYLSTTAGPIAGLLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMVPVKKVERVNRRN 126
            CYLSTTAGPIAGLLF+S+  +AFCS+R I ++SPQG L R+ YKV +P+ K+  VN+  
Sbjct: 115 QCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGVLSRVHYKVSIPLCKINGVNQSQ 174

Query: 127 NISNPSKKYIQVVTVDHFDFWFMGFLNYEKALKFLQKGVSKD 169
           N   PS+KY+++VT+D+FDFWFMGF++Y+KA   L+K ++ D
Sbjct: 175 NTKKPSQKYLEIVTIDNFDFWFMGFVSYQKAFNCLEKALNND 216

[Close]

BLAST of Clc02G15080 vs. ExPASy Swiss-Prot
Match: Q9FMW5 (GEM-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=At5g23360 PE=2 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.2e-43
Identity = 80/162 (49.38%), Postives = 119/162 (73.46%), Query Frame = 0


Query: 7   RKGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLVQLGGSEKIFRKMFNLRQGDKLLGSA 66
           +K  SF NG  +  KL P + +TVK KL LG K++Q+GG EKI++++F +   +KL  + 
Sbjct: 47  KKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDKEKLFKAY 106

Query: 67  HCYLSTTAGPIAGLLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMVPVKKVERVNRRN 126
            CYLSTT G IAGLLF+S+  +AFCS+R I ++SPQG+L R+ YKV +P+ K+  VN+  
Sbjct: 107 QCYLSTTEGSIAGLLFISSKKIAFCSERSIKVTSPQGDLTRVHYKVSIPLCKINGVNQSQ 166

Query: 127 NISNPSKKYIQVVTVDHFDFWFMGFLNYEKALKFLQKGVSKD 169
           N   PS++Y++VVTVD++DFWFMGF++Y+KA   L+K +++D
Sbjct: 167 NTKKPSQRYLEVVTVDNYDFWFMGFVSYQKAFNCLEKALNED 208

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BLAST of Clc02G15080 vs. ExPASy Swiss-Prot
Match: Q9LYV6 (GEM-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At5g13200 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.4e-31
Identity = 68/166 (40.96%), Postives = 98/166 (59.04%), Query Frame = 0


Query: 1   MIRELGRKGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLVQLGGSEKIFRKMFNLRQGD 60
           M     RK  +    +  ++K  P++++T  GK+ L  K +  GG E +FR++F     +
Sbjct: 96  MFHTWSRKAETVARNLWHNLKTGPSMSETAWGKVNLTAKAITKGGFESLFRQIFGTEPNE 155

Query: 61  KLLGSAHCYLSTTAGPIAGLLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMVPVKKVE 120
            L  +  CYLSTT GP+AG +++S   VAFCSDRP+  ++P G+    +Y+V+VP+  V 
Sbjct: 156 TLKKTFACYLSTTTGPVAGTVYLSNARVAFCSDRPLYFTAPSGQESWSYYRVVVPLANVA 215

Query: 121 RVNRRNNISNPSKKYIQVVTVDHFDFWFMGFLNYEKALKFLQKGVS 167
            VN       P +KYIQ+ TVD  DFWFMGF+NYEKA   L   VS
Sbjct: 216 TVNPVVVKETPPEKYIQLTTVDGHDFWFMGFVNYEKATHHLLTSVS 261

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BLAST of Clc02G15080 vs. ExPASy TrEMBL
Match: A0A1S3BDR8 (GEM-like protein 4 OS=Cucumis melo OX=3656 GN=LOC103488777 PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.2e-80
Identity = 147/168 (87.50%), Postives = 157/168 (93.45%), Query Frame = 0


Query: 1   MIRELGRKGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLVQLGGSEKIFRKMFNLRQGD 60
           MIRELGRKGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLVQ GGSEKIF KMFNL QGD
Sbjct: 1   MIRELGRKGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLVQFGGSEKIFHKMFNLEQGD 60

Query: 61  KLLGSAHCYLSTTAGPIAGLLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMVPVKKVE 120
           KLL SAHCYLSTTAGPIAGL+FVSTHVVAFCSDRPIIISSP GE+G++FYKVM+PV KV+
Sbjct: 61  KLLNSAHCYLSTTAGPIAGLVFVSTHVVAFCSDRPIIISSPHGEVGKVFYKVMIPVNKVK 120

Query: 121 RVNRRNNISNPSKKYIQVVTVDHFDFWFMGFLNYEKALKFLQKGVSKD 169
           RVN+RNN +NP+KKYIQVVTVD FDFWFMGFLNYEK  KF+QKGVS D
Sbjct: 121 RVNQRNNENNPAKKYIQVVTVDDFDFWFMGFLNYEKTFKFIQKGVSMD 168

[Close]

BLAST of Clc02G15080 vs. ExPASy TrEMBL
Match: A0A0A0KPM0 (GRAM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G577990 PE=3 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 9.2e-79
Identity = 142/168 (84.52%), Postives = 156/168 (92.86%), Query Frame = 0


Query: 1   MIRELGRKGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLVQLGGSEKIFRKMFNLRQGD 60
           MIRELGR+GYSFVNGILEHVKLSPNIAKTVKGKLWLGTKL+Q GGSE IF KMFNL  GD
Sbjct: 1   MIRELGRRGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLLQFGGSENIFHKMFNLEHGD 60

Query: 61  KLLGSAHCYLSTTAGPIAGLLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMVPVKKVE 120
           KLL SAHCYLSTTAGPIAGL+FVSTHVVAFCSDRPIIISSP GE+G++FYKVM+PV KV+
Sbjct: 61  KLLNSAHCYLSTTAGPIAGLIFVSTHVVAFCSDRPIIISSPHGEIGKIFYKVMIPVNKVK 120

Query: 121 RVNRRNNISNPSKKYIQVVTVDHFDFWFMGFLNYEKALKFLQKGVSKD 169
           RVN+RNN++NP+KKYIQVVTVD FDFWFMGFLN+EKA KF+Q GVS D
Sbjct: 121 RVNQRNNVNNPAKKYIQVVTVDDFDFWFMGFLNHEKAFKFIQNGVSVD 168

[Close]

BLAST of Clc02G15080 vs. ExPASy TrEMBL
Match: A0A6J1CD83 (putative GEM-like protein 8 OS=Momordica charantia OX=3673 GN=LOC111010135 PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.4e-73
Identity = 136/168 (80.95%), Postives = 152/168 (90.48%), Query Frame = 0


Query: 1   MIRELGRKGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLVQLGGSEKIFRKMFNLRQGD 60
           MIR+LGRK  SFVNGIL+HVKLSPN+A+TVKGKLWL  KLVQ GGS KIF+K+FNLRQGD
Sbjct: 4   MIRKLGRKADSFVNGILDHVKLSPNVAETVKGKLWLVAKLVQFGGSGKIFQKLFNLRQGD 63

Query: 61  KLLGSAHCYLSTTAGPIAGLLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMVPVKKVE 120
           KLL S+HCYLSTTAGPIAGLLF+ST+ VAFCSDRPIII+SP GELGR  YKVM+PVKK++
Sbjct: 64  KLLSSSHCYLSTTAGPIAGLLFISTNAVAFCSDRPIIITSPHGELGRFNYKVMIPVKKMK 123

Query: 121 RVNRRNNISNPSKKYIQVVTVDHFDFWFMGFLNYEKALKFLQKGVSKD 169
           RVN+  N+SNPSKKYIQVVTVD FDFWFMGFLNY KA KFLQKGVS+D
Sbjct: 124 RVNQTENVSNPSKKYIQVVTVDDFDFWFMGFLNYGKAFKFLQKGVSED 171

[Close]

BLAST of Clc02G15080 vs. ExPASy TrEMBL
Match: A0A5A7SSY1 (GEM-like protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00680 PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.5e-68
Identity = 128/149 (85.91%), Postives = 138/149 (92.62%), Query Frame = 0


Query: 20  VKLSPNIAKTVKGKLWLGTKLVQLGGSEKIFRKMFNLRQGDKLLGSAHCYLSTTAGPIAG 79
           VKLSPNIAKTVKGKLWLGTKLVQ GGSEKIF KMFNL QGDKLL SAHCYLSTTAGPIAG
Sbjct: 6   VKLSPNIAKTVKGKLWLGTKLVQFGGSEKIFHKMFNLEQGDKLLNSAHCYLSTTAGPIAG 65

Query: 80  LLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMVPVKKVERVNRRNNISNPSKKYIQVV 139
           L+FVSTHVVAFCSDRPIIISSP GE+G++FYKVM+PV KV+RVN+RNN +NP+KKYIQVV
Sbjct: 66  LVFVSTHVVAFCSDRPIIISSPHGEVGKVFYKVMIPVNKVKRVNQRNNENNPAKKYIQVV 125

Query: 140 TVDHFDFWFMGFLNYEKALKFLQKGVSKD 169
           TVD FDFWFMGFLNYEK  KF+QKGVS D
Sbjct: 126 TVDDFDFWFMGFLNYEKTFKFIQKGVSMD 154

[Close]

BLAST of Clc02G15080 vs. ExPASy TrEMBL
Match: A0A6J1HVV6 (putative GEM-like protein 8 OS=Cucurbita maxima OX=3661 GN=LOC111466633 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.4e-66
Identity = 124/168 (73.81%), Postives = 142/168 (84.52%), Query Frame = 0


Query: 1   MIRELGRKGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLVQLGGSEKIFRKMFNLRQGD 60
           MIR +G K   FVNG+ +HVKLSP++ KTVK KLWLG KLVQ+G SEKIF+KMF LRQ D
Sbjct: 1   MIRNIGSKAARFVNGVFQHVKLSPSVTKTVKRKLWLGAKLVQIGRSEKIFKKMFKLRQDD 60

Query: 61  KLLGSAHCYLSTTAGPIAGLLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMVPVKKVE 120
           KLL S+HCYLSTTAGPIAGLLFVSTHVVAFCSDRPII SSP  E  R+ YKVM+P+KK++
Sbjct: 61  KLLSSSHCYLSTTAGPIAGLLFVSTHVVAFCSDRPIIFSSPHEEQSRMNYKVMIPMKKMK 120

Query: 121 RVNRRNNISNPSKKYIQVVTVDHFDFWFMGFLNYEKALKFLQKGVSKD 169
           RVN   N++NPSKKYIQVVTVD F+FWFMGFLNY+ A KFL KG+SKD
Sbjct: 121 RVNESENVNNPSKKYIQVVTVDGFEFWFMGFLNYKIAFKFLPKGLSKD 168

[Close]

BLAST of Clc02G15080 vs. TAIR 10
Match: AT5G08350.1 (GRAM domain-containing protein / ABA-responsive protein-related )

HSP 1 Score: 186.8 bits (473), Expect = 1.4e-47
Identity = 84/160 (52.50%), Postives = 120/160 (75.00%), Query Frame = 0


Query: 7   RKGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLVQLGGSEKIFRKMFNLRQGDKLLGSA 66
           +K   F NG+ +  K+ P + +TVK KL LG +++Q+GG EKIF+++F + +G+KL    
Sbjct: 54  KKTDGFTNGVRDQSKIRPKLTETVKRKLSLGARILQVGGLEKIFKRLFRVSEGEKLFKMY 113

Query: 67  HCYLSTTAGPIAGLLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMVPVKKVERVNRRN 126
            CYLSTTAGPIAGLLF+S+  +AFCS+R I + SPQG++ R+ YKV +P+ K++RVN+  
Sbjct: 114 QCYLSTTAGPIAGLLFISSKKMAFCSERSIKVDSPQGDIIRVHYKVSIPLCKIDRVNQSQ 173

Query: 127 NISNPSKKYIQVVTVDHFDFWFMGFLNYEKALKFLQKGVS 167
           N   PS+KY++VVTVD FDFWFMGFL+Y+KA   L+K +S
Sbjct: 174 NTKKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEKALS 213

[Close]

BLAST of Clc02G15080 vs. TAIR 10
Match: AT5G23370.1 (GRAM domain-containing protein / ABA-responsive protein-related )

HSP 1 Score: 186.0 bits (471), Expect = 2.4e-47
Identity = 84/160 (52.50%), Postives = 120/160 (75.00%), Query Frame = 0


Query: 7   RKGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLVQLGGSEKIFRKMFNLRQGDKLLGSA 66
           +K  SF NG+ +  KL P + +TVK KL LG +++Q+GG EKI++++F +   +KL  + 
Sbjct: 55  KKNDSFTNGVRDQDKLGPKLTETVKRKLSLGARILQMGGLEKIYKRLFKVSDEEKLFKAY 114

Query: 67  HCYLSTTAGPIAGLLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMVPVKKVERVNRRN 126
            CYLSTTAGPIAGLLF+S+  +AFCS+R I ++SPQGEL R+ YKV +P+ K+  VN+  
Sbjct: 115 QCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGELNRVHYKVSIPLCKINGVNQSQ 174

Query: 127 NISNPSKKYIQVVTVDHFDFWFMGFLNYEKALKFLQKGVS 167
           N + PS+KY++VVTVD FDFWFMGFL+Y+KA   L++ +S
Sbjct: 175 NTTKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEQALS 214

[Close]

BLAST of Clc02G15080 vs. TAIR 10
Match: AT5G23350.1 (GRAM domain-containing protein / ABA-responsive protein-related )

HSP 1 Score: 183.0 bits (463), Expect = 2.0e-46
Identity = 82/162 (50.62%), Postives = 119/162 (73.46%), Query Frame = 0


Query: 7   RKGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLVQLGGSEKIFRKMFNLRQGDKLLGSA 66
           +K  SF NG  +  KL P + +TVK KL LG K++Q+GG EKI++++F +   +KL  + 
Sbjct: 117 KKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDQEKLFKAY 176

Query: 67  HCYLSTTAGPIAGLLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMVPVKKVERVNRRN 126
            CYLSTTAGPIAGLLF+S+  +AFCS+R I ++SPQG L R+ YKV +P+ K+  VN+  
Sbjct: 177 QCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGVLSRVHYKVSIPLCKINGVNQSQ 236

Query: 127 NISNPSKKYIQVVTVDHFDFWFMGFLNYEKALKFLQKGVSKD 169
           N   PS+KY+++VT+D+FDFWFMGF++Y+KA   L+K ++ D
Sbjct: 237 NTKKPSQKYLEIVTIDNFDFWFMGFVSYQKAFNCLEKALNND 278

[Close]

BLAST of Clc02G15080 vs. TAIR 10
Match: AT5G23360.1 (GRAM domain-containing protein / ABA-responsive protein-related )

HSP 1 Score: 177.6 bits (449), Expect = 8.6e-45
Identity = 80/162 (49.38%), Postives = 119/162 (73.46%), Query Frame = 0


Query: 7   RKGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLVQLGGSEKIFRKMFNLRQGDKLLGSA 66
           +K  SF NG  +  KL P + +TVK KL LG K++Q+GG EKI++++F +   +KL  + 
Sbjct: 47  KKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDKEKLFKAY 106

Query: 67  HCYLSTTAGPIAGLLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMVPVKKVERVNRRN 126
            CYLSTT G IAGLLF+S+  +AFCS+R I ++SPQG+L R+ YKV +P+ K+  VN+  
Sbjct: 107 QCYLSTTEGSIAGLLFISSKKIAFCSERSIKVTSPQGDLTRVHYKVSIPLCKINGVNQSQ 166

Query: 127 NISNPSKKYIQVVTVDHFDFWFMGFLNYEKALKFLQKGVSKD 169
           N   PS++Y++VVTVD++DFWFMGF++Y+KA   L+K +++D
Sbjct: 167 NTKKPSQRYLEVVTVDNYDFWFMGFVSYQKAFNCLEKALNED 208

[Close]

BLAST of Clc02G15080 vs. TAIR 10
Match: AT5G13200.1 (GRAM domain family protein )

HSP 1 Score: 137.5 bits (345), Expect = 9.9e-33
Identity = 68/166 (40.96%), Postives = 98/166 (59.04%), Query Frame = 0


Query: 1   MIRELGRKGYSFVNGILEHVKLSPNIAKTVKGKLWLGTKLVQLGGSEKIFRKMFNLRQGD 60
           M     RK  +    +  ++K  P++++T  GK+ L  K +  GG E +FR++F     +
Sbjct: 96  MFHTWSRKAETVARNLWHNLKTGPSMSETAWGKVNLTAKAITKGGFESLFRQIFGTEPNE 155

Query: 61  KLLGSAHCYLSTTAGPIAGLLFVSTHVVAFCSDRPIIISSPQGELGRLFYKVMVPVKKVE 120
            L  +  CYLSTT GP+AG +++S   VAFCSDRP+  ++P G+    +Y+V+VP+  V 
Sbjct: 156 TLKKTFACYLSTTTGPVAGTVYLSNARVAFCSDRPLYFTAPSGQESWSYYRVVVPLANVA 215

Query: 121 RVNRRNNISNPSKKYIQVVTVDHFDFWFMGFLNYEKALKFLQKGVS 167
            VN       P +KYIQ+ TVD  DFWFMGF+NYEKA   L   VS
Sbjct: 216 TVNPVVVKETPPEKYIQLTTVDGHDFWFMGFVNYEKATHHLLTSVS 261

The following BLAST results are available for this feature:

BLAST of Clc02G15080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445893.1	4.5e-80	87.50	PREDICTED: GEM-like protein 4 [Cucumis melo]	[more]
XP_038893009.1	5.0e-79	90.91	GEM-like protein 4 [Benincasa hispida]	[more]
XP_004147134.1	1.9e-78	84.52	GEM-like protein 4 [Cucumis sativus] >KGN51560.1 hypothetical protein Csa_008945...	[more]
XP_022139162.1	7.0e-73	80.95	putative GEM-like protein 8 [Momordica charantia]	[more]
KAA0034080.1	3.0e-68	85.91	GEM-like protein 4 [Cucumis melo var. makuwa]	[more]

BLAST of Clc02G15080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FTA0	2.0e-46	52.50	GEM-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=At5g08350 PE=2 SV=1	[more]
Q9FMW4	3.4e-46	52.50	Putative GEM-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=At5g23370 PE=3 SV...	[more]
Q9FMW6	2.9e-45	50.62	GEM-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=At5g23350 PE=2 SV=2	[more]
Q9FMW5	1.2e-43	49.38	GEM-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=At5g23360 PE=2 SV=1	[more]
Q9LYV6	1.4e-31	40.96	GEM-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At5g13200 PE=1 SV=1	[more]

BLAST of Clc02G15080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BDR8	2.2e-80	87.50	GEM-like protein 4 OS=Cucumis melo OX=3656 GN=LOC103488777 PE=3 SV=1	[more]
A0A0A0KPM0	9.2e-79	84.52	GRAM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G577990 PE=3 S...	[more]
A0A6J1CD83	3.4e-73	80.95	putative GEM-like protein 8 OS=Momordica charantia OX=3673 GN=LOC111010135 PE=3 ...	[more]
A0A5A7SSY1	1.5e-68	85.91	GEM-like protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00...	[more]
A0A6J1HVV6	2.4e-66	73.81	putative GEM-like protein 8 OS=Cucurbita maxima OX=3661 GN=LOC111466633 PE=3 SV=...	[more]

BLAST of Clc02G15080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08350.1	1.4e-47	52.50	GRAM domain-containing protein / ABA-responsive protein-related	[more]
AT5G23370.1	2.4e-47	52.50	GRAM domain-containing protein / ABA-responsive protein-related	[more]
AT5G23350.1	2.0e-46	50.62	GRAM domain-containing protein / ABA-responsive protein-related	[more]
AT5G23360.1	8.6e-45	49.38	GRAM domain-containing protein / ABA-responsive protein-related	[more]
AT5G13200.1	9.9e-33	40.96	GRAM domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004182	GRAM domain	SMART	SM00568	gram2001c	coord: 48..126 e-value: 2.4E-17 score: 73.6
IPR004182	GRAM domain	PFAM	PF02893	GRAM	coord: 49..164 e-value: 2.5E-18 score: 66.0
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 46..167 e-value: 7.7E-21 score: 76.0
None	No IPR available	PANTHER	PTHR31969:SF38	GEM-LIKE PROTEIN 4	coord: 2..167
IPR037848	GEM-like protein	PANTHER	PTHR31969	GEM-LIKE PROTEIN 2	coord: 2..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G15080.1	Clc02G15080.1	mRNA