Clc02G13510 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G13510
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Precursor of CEP6
Location	ClcChr02: 25581815 .. 25582482 (+)
RNA-Seq Expression	Clc02G13510
Synteny	Clc02G13510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAGCCACCCCTTCCATCTTAAACCCTAGATTTCCTCTTCCTTAAAAAGAAAAAAAGAAAAAAAAAATATATATCCTCCTCTTTAATTTCTCATATGGGAAATTACCATTTTCAAGCCGTATGCCAATGCGCTATTCTTCTACTTACCATCTTCACAGCCTTTGGAACTCATCAAAGCCAAGGAAGGCCTTTGAAACCTCTTACTTCATCTCAAATTCCTCTCCACTCCTCTCCCGGTGATGGTTTTGGCGAGTCCGACGTCGGTAGCAAAGACGATTTTCGCCCCACGACGCCTGGAAACAGCCCCGGAGTCGGCCACCATTCAGTTCGGAGAAGTGGCACCGTCGCTGCCACTGCTGCTGCCAGCCAGGAAGGGTTGAAGGATGATTTCCGGCCAACGGCACCGGGACATAGCCCCGGCATCGGCCATGTTCTCCACCACATTGCTTCCAAACCAAATGCTTAGAACAATTAGCCTTAAGAATTCTGTATTATTGTTTTGGCCATATATCTTTCATTTCGTGGGTCTGGTTGTTAGAGCTGCTGCCTACAGCTATCTTGTTCTTTCTCTCAGTTTTTTAGTATGGAAAGTGATTGTTTTGTGTTCTTCTGTTTCTAGTAGAGGTTAAATTTATAAATTTGTTTTTAGGGCATTATCTTAATTTAA

mRNA sequence

CAAAGCCACCCCTTCCATCTTAAACCCTAGATTTCCTCTTCCTTAAAAAGAAAAAAAGAAAAAAAAAATATATATCCTCCTCTTTAATTTCTCATATGGGAAATTACCATTTTCAAGCCGTATGCCAATGCGCTATTCTTCTACTTACCATCTTCACAGCCTTTGGAACTCATCAAAGCCAAGGAAGGCCTTTGAAACCTCTTACTTCATCTCAAATTCCTCTCCACTCCTCTCCCGGTGATGGTTTTGGCGAGTCCGACGTCGGTAGCAAAGACGATTTTCGCCCCACGACGCCTGGAAACAGCCCCGGAGTCGGCCACCATTCAGTTCGGAGAAGTGGCACCGTCGCTGCCACTGCTGCTGCCAGCCAGGAAGGGTTGAAGGATGATTTCCGGCCAACGGCACCGGGACATAGCCCCGGCATCGGCCATGTTCTCCACCACATTGCTTCCAAACCAAATGCTTAGAACAATTAGCCTTAAGAATTCTGTATTATTGTTTTGGCCATATATCTTTCATTTCGTGGGTCTGGTTGTTAGAGCTGCTGCCTACAGCTATCTTGTTCTTTCTCTCAGTTTTTTAGTATGGAAAGTGATTGTTTTGTGTTCTTCTGTTTCTAGTAGAGGTTAAATTTATAAATTTGTTTTTAGGGCATTATCTTAATTTAA

Coding sequence (CDS)

ATGGGAAATTACCATTTTCAAGCCGTATGCCAATGCGCTATTCTTCTACTTACCATCTTCACAGCCTTTGGAACTCATCAAAGCCAAGGAAGGCCTTTGAAACCTCTTACTTCATCTCAAATTCCTCTCCACTCCTCTCCCGGTGATGGTTTTGGCGAGTCCGACGTCGGTAGCAAAGACGATTTTCGCCCCACGACGCCTGGAAACAGCCCCGGAGTCGGCCACCATTCAGTTCGGAGAAGTGGCACCGTCGCTGCCACTGCTGCTGCCAGCCAGGAAGGGTTGAAGGATGATTTCCGGCCAACGGCACCGGGACATAGCCCCGGCATCGGCCATGTTCTCCACCACATTGCTTCCAAACCAAATGCTTAG

Protein sequence

MGNYHFQAVCQCAILLLTIFTAFGTHQSQGRPLKPLTSSQIPLHSSPGDGFGESDVGSKDDFRPTTPGNSPGVGHHSVRRSGTVAATAAASQEGLKDDFRPTAPGHSPGIGHVLHHIASKPNA

Homology

[Close]

BLAST of Clc02G13510 vs. NCBI nr
Match: XP_011650158.1 (precursor of CEP9 [Cucumis sativus])

HSP 1 Score: 214.9 bits (546), Expect = 3.8e-52
Identity = 105/128 (82.03%), Postives = 111/128 (86.72%), Query Frame = 0


Query: 1   MGNYHFQAVCQCAILLLTIFTAFGTHQSQGRPLKPLTSSQIPLHSSPGDGFGESDVGSKD 60
           MGNYHFQ +CQCAILLLTIF AFGT+Q QGRP KPLTSS IP HSS GDGF ESDVGSKD
Sbjct: 1   MGNYHFQTICQCAILLLTIFIAFGTYQIQGRPFKPLTSSHIPSHSSLGDGFRESDVGSKD 60

Query: 61  DFRPTTPGNSPGVGHHSVRRSGTVAATAAASQ-----EGLKDDFRPTAPGHSPGIGHVLH 120
           DFRPTTPGNSPGVGHHS+RRSGT+AA A+  +     EGLKDDFRPTAPGHSPGIGHV H
Sbjct: 61  DFRPTTPGNSPGVGHHSIRRSGTMAAIASDGRAVHITEGLKDDFRPTAPGHSPGIGHVQH 120

Query: 121 HIASKPNA 124
           HIASKPNA
Sbjct: 121 HIASKPNA 128

[Close]

BLAST of Clc02G13510 vs. NCBI nr
Match: XP_008457955.1 (PREDICTED: uncharacterized protein LOC103497520 [Cucumis melo] >KAA0045832.1 uncharacterized protein E6C27_scaffold243G003610 [Cucumis melo var. makuwa] >TYJ99451.1 uncharacterized protein E5676_scaffold123G00110 [Cucumis melo var. makuwa])

HSP 1 Score: 211.1 bits (536), Expect = 5.5e-51
Identity = 105/128 (82.03%), Postives = 112/128 (87.50%), Query Frame = 0


Query: 1   MGNYHFQAVCQCAILLLTIFTAFGTHQSQGRPLKPLTSSQIPLHSSPGDGFGESDVGSKD 60
           MGNYHFQ +CQCAILLLTIF AFGT+Q QGRPLKP TSS IP HSS GDGF ES+VGSKD
Sbjct: 1   MGNYHFQTICQCAILLLTIFIAFGTYQIQGRPLKPHTSSHIPSHSSLGDGFRESNVGSKD 60

Query: 61  DFRPTTPGNSPGVGHHSVRRSGTVAATAAASQ-----EGLKDDFRPTAPGHSPGIGHVLH 120
           DFRPTTPGNSPGVGHHSV+RSGT+AA A+ +Q     EGLKDDFRPTAPGHSPGIGHVLH
Sbjct: 61  DFRPTTPGNSPGVGHHSVQRSGTMAAIASNNQLVHNTEGLKDDFRPTAPGHSPGIGHVLH 120

Query: 121 HIASKPNA 124
            IASKPNA
Sbjct: 121 GIASKPNA 128

[Close]

BLAST of Clc02G13510 vs. NCBI nr
Match: KAE8651918.1 (hypothetical protein Csa_006213 [Cucumis sativus])

HSP 1 Score: 176.0 bits (445), Expect = 2.0e-40
Identity = 87/109 (79.82%), Postives = 93/109 (85.32%), Query Frame = 0


Query: 20  FTAFGTHQSQGRPLKPLTSSQIPLHSSPGDGFGESDVGSKDDFRPTTPGNSPGVGHHSVR 79
           + AFGT+Q QGRP KPLTSS IP HSS GDGF ESDVGSKDDFRPTTPGNSPGVGHHS+R
Sbjct: 7   YLAFGTYQIQGRPFKPLTSSHIPSHSSLGDGFRESDVGSKDDFRPTTPGNSPGVGHHSIR 66

Query: 80  RSGTVAATAAASQ-----EGLKDDFRPTAPGHSPGIGHVLHHIASKPNA 124
           RSGT+AA A+  +     EGLKDDFRPTAPGHSPGIGHV HHIASKPNA
Sbjct: 67  RSGTMAAIASDGRAVHITEGLKDDFRPTAPGHSPGIGHVQHHIASKPNA 115

[Close]

BLAST of Clc02G13510 vs. NCBI nr
Match: KAG6571310.1 (Precursor of CEP6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 137.1 bits (344), Expect = 1.0e-28
Identity = 73/119 (61.34%), Postives = 78/119 (65.55%), Query Frame = 0


Query: 5   HFQAVCQCAILLLTIFTAFGTHQSQGRPLKPLTSSQIPLHSSPGDGFGESDVGSKDDFRP 64
           HFQA+  C +LLLTIF A GTHQ QGRPLKP T          G  F ESD+G KDDF P
Sbjct: 4   HFQAITHCLLLLLTIFIAIGTHQIQGRPLKPPT----------GVSFRESDLGCKDDFNP 63

Query: 65  TTPGNSPGVGHHSVRRSGTV-AATAAASQEGLKDDFRPTAPGHSPGIGHVLHHIASKPN 123
            T GNSPGVGHHSVRR G      +    EGLK+DFRPT PGHSPGIGH     ASKPN
Sbjct: 64  ETLGNSPGVGHHSVRRCGMADVGRSVHYTEGLKNDFRPTVPGHSPGIGHAYPRTASKPN 112

[Close]

BLAST of Clc02G13510 vs. NCBI nr
Match: KAG7019315.1 (Precursor of CEP6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 136.0 bits (341), Expect = 2.3e-28
Identity = 73/119 (61.34%), Postives = 78/119 (65.55%), Query Frame = 0


Query: 5   HFQAVCQCAILLLTIFTAFGTHQSQGRPLKPLTSSQIPLHSSPGDGFGESDVGSKDDFRP 64
           HFQA+  C +LLLTIF A GTHQ QGRPLKP T          G  F ESD+G K DF P
Sbjct: 4   HFQAITHCLLLLLTIFIAIGTHQIQGRPLKPPT----------GVSFRESDLGCKRDFNP 63

Query: 65  TTPGNSPGVGHHSVRRSGTV-AATAAASQEGLKDDFRPTAPGHSPGIGHVLHHIASKPN 123
            T GNSPGVGHHSVRR G      +    EGLK+DFRPT PGHSPGIGH    IASKPN
Sbjct: 64  ETLGNSPGVGHHSVRRCGMADVGRSVHYTEGLKNDFRPTVPGHSPGIGHAYPRIASKPN 112

[Close]

BLAST of Clc02G13510 vs. ExPASy Swiss-Prot
Match: B3H5A9 (Precursor of CEP6 OS=Arabidopsis thaliana OX=3702 GN=CEP6 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.9e-10
Identity = 33/68 (48.53%), Postives = 40/68 (58.82%), Query Frame = 0


Query: 56  VGSKDDFRPTTPGNSPGVGHHSVRRSGTVAATAAASQEGLKDDFRPTAPGHSPGIGHVLH 115
           VG  DDF PT+PGNSPG+GH                  G KDDF PT PGHSPG+GH + 
Sbjct: 44  VGYTDDFGPTSPGNSPGIGHKMKENEENAG--------GYKDDFEPTTPGHSPGVGHAVK 101

Query: 116 HIASKPNA 124
           +  ++PNA
Sbjct: 104 N--NEPNA 101

[Close]

BLAST of Clc02G13510 vs. ExPASy Swiss-Prot
Match: A0A1I9LMX5 (Precursor of CEP9 OS=Arabidopsis thaliana OX=3702 GN=CEP9 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.1e-08
Identity = 29/58 (50.00%), Postives = 33/58 (56.90%), Query Frame = 0


Query: 57  GSKDDFRPTTPGNSPGVGHHSVRRSGTVAATAAASQEGLKDDFRPTAPGHSPGIGHVL 115
           GS DDF PTTPGNSPG+GH                     DDF+PT PGHSPG+GH +
Sbjct: 197 GSTDDFAPTTPGNSPGMGHKK------------------GDDFKPTTPGHSPGVGHAV 236

[Close]

BLAST of Clc02G13510 vs. ExPASy Swiss-Prot
Match: Q9SKW7 (Precursor of CEP10 OS=Arabidopsis thaliana OX=3702 GN=CEP10 PE=3 SV=2)

HSP 1 Score: 45.8 bits (107), Expect = 4.0e-04
Identity = 23/54 (42.59%), Postives = 28/54 (51.85%), Query Frame = 0


Query: 60  DDFRPTTPGNSPGVGHHSVRRSGTVAATAAASQEGLKDDFRPTAPGHSPGIGHV 114
           +DF PT PG++ G+GH  V                   DF PT PGHSPGIGH+
Sbjct: 66  NDFAPTNPGHNSGIGHPKV------------INNKFTKDFAPTNPGHSPGIGHL 107

[Close]

BLAST of Clc02G13510 vs. ExPASy TrEMBL
Match: A0A0A0LMN4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285370 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.8e-52
Identity = 105/128 (82.03%), Postives = 111/128 (86.72%), Query Frame = 0


Query: 1   MGNYHFQAVCQCAILLLTIFTAFGTHQSQGRPLKPLTSSQIPLHSSPGDGFGESDVGSKD 60
           MGNYHFQ +CQCAILLLTIF AFGT+Q QGRP KPLTSS IP HSS GDGF ESDVGSKD
Sbjct: 1   MGNYHFQTICQCAILLLTIFIAFGTYQIQGRPFKPLTSSHIPSHSSLGDGFRESDVGSKD 60

Query: 61  DFRPTTPGNSPGVGHHSVRRSGTVAATAAASQ-----EGLKDDFRPTAPGHSPGIGHVLH 120
           DFRPTTPGNSPGVGHHS+RRSGT+AA A+  +     EGLKDDFRPTAPGHSPGIGHV H
Sbjct: 61  DFRPTTPGNSPGVGHHSIRRSGTMAAIASDGRAVHITEGLKDDFRPTAPGHSPGIGHVQH 120

Query: 121 HIASKPNA 124
           HIASKPNA
Sbjct: 121 HIASKPNA 128

[Close]

BLAST of Clc02G13510 vs. ExPASy TrEMBL
Match: A0A5A7TR16 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00110 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 2.7e-51
Identity = 105/128 (82.03%), Postives = 112/128 (87.50%), Query Frame = 0


Query: 1   MGNYHFQAVCQCAILLLTIFTAFGTHQSQGRPLKPLTSSQIPLHSSPGDGFGESDVGSKD 60
           MGNYHFQ +CQCAILLLTIF AFGT+Q QGRPLKP TSS IP HSS GDGF ES+VGSKD
Sbjct: 1   MGNYHFQTICQCAILLLTIFIAFGTYQIQGRPLKPHTSSHIPSHSSLGDGFRESNVGSKD 60

Query: 61  DFRPTTPGNSPGVGHHSVRRSGTVAATAAASQ-----EGLKDDFRPTAPGHSPGIGHVLH 120
           DFRPTTPGNSPGVGHHSV+RSGT+AA A+ +Q     EGLKDDFRPTAPGHSPGIGHVLH
Sbjct: 61  DFRPTTPGNSPGVGHHSVQRSGTMAAIASNNQLVHNTEGLKDDFRPTAPGHSPGIGHVLH 120

Query: 121 HIASKPNA 124
            IASKPNA
Sbjct: 121 GIASKPNA 128

[Close]

BLAST of Clc02G13510 vs. ExPASy TrEMBL
Match: A0A1S3C7Z6 (uncharacterized protein LOC103497520 OS=Cucumis melo OX=3656 GN=LOC103497520 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 2.7e-51
Identity = 105/128 (82.03%), Postives = 112/128 (87.50%), Query Frame = 0


Query: 1   MGNYHFQAVCQCAILLLTIFTAFGTHQSQGRPLKPLTSSQIPLHSSPGDGFGESDVGSKD 60
           MGNYHFQ +CQCAILLLTIF AFGT+Q QGRPLKP TSS IP HSS GDGF ES+VGSKD
Sbjct: 1   MGNYHFQTICQCAILLLTIFIAFGTYQIQGRPLKPHTSSHIPSHSSLGDGFRESNVGSKD 60

Query: 61  DFRPTTPGNSPGVGHHSVRRSGTVAATAAASQ-----EGLKDDFRPTAPGHSPGIGHVLH 120
           DFRPTTPGNSPGVGHHSV+RSGT+AA A+ +Q     EGLKDDFRPTAPGHSPGIGHVLH
Sbjct: 61  DFRPTTPGNSPGVGHHSVQRSGTMAAIASNNQLVHNTEGLKDDFRPTAPGHSPGIGHVLH 120

Query: 121 HIASKPNA 124
            IASKPNA
Sbjct: 121 GIASKPNA 128

[Close]

BLAST of Clc02G13510 vs. ExPASy TrEMBL
Match: A0A438KJP7 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_001818 PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.3e-13
Identity = 50/101 (49.50%), Postives = 60/101 (59.41%), Query Frame = 0


Query: 34  KPLTSSQIPLHSSPGDGFGESDVGSKDDFRPTTPGNSPGVGHHSV-----------RRSG 93
           K L    +P +S    GFG+S   SKDDFRPTTPG+SPGVGHHSV           R S 
Sbjct: 80  KELPPPMLPNYSV---GFGDSTAVSKDDFRPTTPGSSPGVGHHSVPTKDDTQPKALRNSP 139

Query: 94  TVAATAAASQEGLKDDFRPTAPGHSPGIGHVLHHIASKPNA 124
           +V  +  A     KDD+RPT PGHSPG+GH L    ++PNA
Sbjct: 140 SVRQSVTA----YKDDYRPTKPGHSPGVGHSLQKTNAEPNA 173

[Close]

BLAST of Clc02G13510 vs. ExPASy TrEMBL
Match: A0A438F583 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_066883 PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.3e-13
Identity = 50/101 (49.50%), Postives = 60/101 (59.41%), Query Frame = 0


Query: 34  KPLTSSQIPLHSSPGDGFGESDVGSKDDFRPTTPGNSPGVGHHSV-----------RRSG 93
           K L    +P +S    GFG+S   SKDDFRPTTPG+SPGVGHHSV           R S 
Sbjct: 120 KELPPPMLPNYSV---GFGDSTAVSKDDFRPTTPGSSPGVGHHSVPTKDDTQPKALRNSP 179

Query: 94  TVAATAAASQEGLKDDFRPTAPGHSPGIGHVLHHIASKPNA 124
           +V  +  A     KDD+RPT PGHSPG+GH L    ++PNA
Sbjct: 180 SVRQSVTA----YKDDYRPTKPGHSPGVGHSLQKTNAEPNA 213

[Close]

BLAST of Clc02G13510 vs. TAIR 10
Match: AT5G66816.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 65.5 bits (158), Expect = 3.5e-11
Identity = 33/68 (48.53%), Postives = 40/68 (58.82%), Query Frame = 0


Query: 56  VGSKDDFRPTTPGNSPGVGHHSVRRSGTVAATAAASQEGLKDDFRPTAPGHSPGIGHVLH 115
           VG  DDF PT+PGNSPG+GH                  G KDDF PT PGHSPG+GH + 
Sbjct: 44  VGYTDDFGPTSPGNSPGIGHKMKENEENAG--------GYKDDFEPTTPGHSPGVGHAVK 101

Query: 116 HIASKPNA 124
           +  ++PNA
Sbjct: 104 N--NEPNA 101

[Close]

BLAST of Clc02G13510 vs. TAIR 10
Match: AT3G50610.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66816.1); Has 125 Blast hits to 60 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 10; Fungi - 4; Plants - 97; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). )

HSP 1 Score: 60.1 bits (144), Expect = 1.5e-09
Identity = 29/58 (50.00%), Postives = 33/58 (56.90%), Query Frame = 0


Query: 57  GSKDDFRPTTPGNSPGVGHHSVRRSGTVAATAAASQEGLKDDFRPTAPGHSPGIGHVL 115
           GS DDF PTTPGNSPG+GH                     DDF+PT PGHSPG+GH +
Sbjct: 183 GSTDDFAPTTPGNSPGMGHKK------------------GDDFKPTTPGHSPGVGHAV 222

[Close]

BLAST of Clc02G13510 vs. TAIR 10
Match: AT5G66815.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 1.1e-04
Identity = 21/28 (75.00%), Postives = 21/28 (75.00%), Query Frame = 0


Query: 91  SQEGLKD--DFRPTAPGHSPGIGHVLHH 117
           SQ G KD  DFRPT PGHSPGIGH L H
Sbjct: 77  SQSGGKDAEDFRPTTPGHSPGIGHSLSH 104

The following BLAST results are available for this feature:

BLAST of Clc02G13510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650158.1	3.8e-52	82.03	precursor of CEP9 [Cucumis sativus]	[more]
XP_008457955.1	5.5e-51	82.03	PREDICTED: uncharacterized protein LOC103497520 [Cucumis melo] >KAA0045832.1 unc...	[more]
KAE8651918.1	2.0e-40	79.82	hypothetical protein Csa_006213 [Cucumis sativus]	[more]
KAG6571310.1	1.0e-28	61.34	Precursor of CEP6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7019315.1	2.3e-28	61.34	Precursor of CEP6, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Clc02G13510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B3H5A9	4.9e-10	48.53	Precursor of CEP6 OS=Arabidopsis thaliana OX=3702 GN=CEP6 PE=1 SV=1	[more]
A0A1I9LMX5	2.1e-08	50.00	Precursor of CEP9 OS=Arabidopsis thaliana OX=3702 GN=CEP9 PE=1 SV=1	[more]
Q9SKW7	4.0e-04	42.59	Precursor of CEP10 OS=Arabidopsis thaliana OX=3702 GN=CEP10 PE=3 SV=2	[more]

BLAST of Clc02G13510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMN4	1.8e-52	82.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285370 PE=3 SV=1	[more]
A0A5A7TR16	2.7e-51	82.03	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C7Z6	2.7e-51	82.03	uncharacterized protein LOC103497520 OS=Cucumis melo OX=3656 GN=LOC103497520 PE=...	[more]
A0A438KJP7	1.3e-13	49.50	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_001818 PE=3 SV=1	[more]
A0A438F583	1.3e-13	49.50	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_066883 PE=3 SV=1	[more]

BLAST of Clc02G13510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66816.1	3.5e-11	48.53	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G50610.1	1.5e-09	50.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G66815.1	1.1e-04	75.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..112
None	No IPR available	PANTHER	PTHR33348:SF29	PRECURSOR OF CEP1-RELATED	coord: 46..123
IPR033250	C-terminally encoded peptide	PANTHER	PTHR33348	PRECURSOR OF CEP5	coord: 46..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G13510.1	Clc02G13510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902025	nitrate import
biological_process	GO:1901371	regulation of leaf morphogenesis
biological_process	GO:2000280	regulation of root development
biological_process	GO:0007165	signal transduction
biological_process	GO:0048364	root development
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005179	hormone activity