Clc02G13040 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G13040
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	U3 small nucleolar RNA-associated protein 18 homolog
Location	ClcChr02: 24921799 .. 24925641 (-)
RNA-Seq Expression	Clc02G13040
Synteny	Clc02G13040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAAGTAAAATTAAAACAAAATTCACAACAAGATGCAACTGAAGCCCTAGCCAAATTTCCCTCTCTTTCTCCTTCGGGGTGAGGTAACCGTCAAGCCCTCTGTTTTCTTTCTTCCGGCCGACCAGCCCCCTCGTCTTCCCCTTTCGGCGAAGAATATCCACGACGGCGCTCCCTGCTCGCGTGAAGAACAGGTGCGCGGCGACAAATACTTCCGGTGGTGGTGACCCACGCGACAACCTCGTCTTCGGCGGCGCGTTTAGGCCTCTAGTGGTGTGGCGACGATTGATTCATTCCGACAACATTGAGTTTTGGAGACTTTTCCGATTTCCAGCAGCGTTTACCCATTCGAAAACTAGACTTTTGAACCACTCCGATTTCGTGACTCGCGCGATTTCAACGTTTTCAGCAAGGTTTTCCTCTTTCGGTGAGTTTCGGCTTTAACCCAATCACTTTCTACCTCTGTTTAATGTTACCCACTCCCTTTCGGCTTCATATATGCAGGTTTAAGCTTGTTCGAATTCCATCAGAGCGCTCTTAGCTCCTATCGAACTCCTCTAAGTGTTGTAGCTTAGTTTCTAAACTTTAGCACCTCTCTTTTTGCAGCAACGGACTGATACTGGACCAGTTCGAACACTTTTCTAGCCAAGTTTTAAGTCTGTTTTGGTGAGTTTTGAGTATTAAAGTTCTGTTTAGGCCATTTCAGACATAGTTGAACTGATTTAGATTGGTTTCTAATCCTTAGAAGCTCATATTAGTAGATTCGGATTGGTTTTGGACTCTTTCGAACATTTTTTTTTCAGCTAAGTGCCAATTAGGTTTCGTTAAGATTTAGGTGGTAAGCATCTATTTGGACCTTTTTAAACTCGTTATGAATGCTGTAAATTAGTTTATAACTTTTGGAACACTCTTTTGTAGTTTGGGGCTAATTTGTAGTATTCGAGCTATTATGAGTGCACTAGGTAAGTGGAATTCTATTTGGGGAGTTTGTTGTGTGCTAGTGTGCCTTCTGCTTGGCTATACCATATTTATTGTCTATGACCGAGTGTTTGATACTCTTGAATCATTTGTTATAGATATATATAAAAGCATGTTGTGGTGTTGTGTTAACATTGTAATAACTTGCATGTTGAGGAATTATTAAGTGACCTTGTTTATGAATATGTTGACTGTTGAGAATGTCTAGATATGCATATGATTTATGTTGAGAACTGTTGTTTTGTGTTTTGGCACATAATGTGGTTTAGCGCTACGTTGTAGGACTTGTGCATTCGGTGAGGTTAAGAACATTGTGAGTGTGTAAGGGAAAGTAAGGTGAAAAAGGGAAGAGTTTTTCTCTTATAACAAAAATTAATTTCAAAATTTTAGTGTATTTTACCGTGTAATTTTAGCTAGGGTAAAATACACTTTTGGCCTGGAGATTTGGATTTAGTGTCTATTTGGTCCTTCAAGTTTCAAAATGAACATTTTACTCCCGAGATTTGAGAATTAATTTGAAATGATCTCTAAACTAGATTGATCGTTAGTTGACTTACCGTAGAATGACGTGACAGTTTTAGATTAGTGATTGTAAATGTTGATTTGCACTCTTACATGACTATGTATCTAATCACTACATAAGTTCAGACATATTTTTCAATTGTTCATTCAATTAAATGGTAATGAACCAATTACTGTGATATATGAATGTGGATTATTATATTGTAAAGTTCAACTACTTAACTTCAGAAATTAAGACTAAAGGCACAATTTAAAGGAAGGAATAAGTTGAGCTTATGGGTCATGAGATCTTTTACTTCTGATGCATTTTCGGTTAACTTGTCAGTATGATTGATTTTGCAGGAGGTAAGTGGAAGATGAGTTTAATATCACAAAATGTTGCTGTAATTAGTAGTATTGAGAAGGATACAGGGGAGAATACTGTTGCCGTGTCATCTCTGTTGAGAAACATAGATGCTAGTGATGTAGAAAACTCTGGTCTAGATACTTATAGCACAAAGAAGAGAAAGAAAGAACATAAAAAAGAAGATGAACACCTAGTAAAAGAACAACAAAAGGAAATGAAGAAGCTCGAAAACTTTCTTTTTGGATCACTCTATTCCCCTGTTGAATTTGGAAAGGATGAAGAGCAAAATGGTTTCAGTTCTGAGGAGAAAGTACCTGCTTTGTACATAATGGACCGTGCTGCGAATATTTCCCTTTCTGCATATGAAGATGATTTTGGGCTCCTAGATGAGAGTGCGAATAAGGAGGAACCTCAGCAAAGAAAACCAGTATGGGTTGATGAGGAAGAGGAGAAGGCCACAGTCAATATTACTAATGTTAGTAGACTGAGAAAATTGAGGAAGGAAGAAGATGAGAATTCGATTTCCGGTTCAGAGTACGTGTCAAGACTGAGGGCTCAGCATGCCAAACTAAACCCAGGCACTGAGTGGGCTCAACTTGATGCACAATCCAGGGATGATAGTGATGATGACGATCTGTCCTCAGATGATGAAAATGCAGTTGCATTGGCTGATGGTCATGATAATGTTGAATCTATTGATGATATCCTTCGAACGAGTGAGAATCTTGTTGTGAAGAGTGGTGCAAAATTGATGCCTGGTCTTCTTGGATACTCGAGACTTGTAGATGCTAATGTAGAGGAGCCATCTAATGGTCCTATCAATTCGGTTCAGTTTCATCGCAATGCTCAGTTACTGCTAGCCACTGGGTTGGATCGAAAGCTTAGATTTTTTCAGATTGATGGTAAACGGAATACCAAAATTCAGAGCATTTTCCTTGAGGATTGCCCCATACGAAAGGCATCATTTCTGCCTGATGGATCTCAGGTTATCATAGCTGGGAGGAGAAAGTTCTTCTATAGCCTCGATCTAGTGAAAGCAAAAGTAGATAAAATTGGCCCTCTTGTAGGTAGAGAGGAGAAAAGCCTTGAAGTTTTTGAAGTTTCTCCTGATTCTAGCACAGTCGCATTTATAGGCAATGAAGGCTATATCCTGTTAGTGTCAACCAAAACAAAGGAGCTCATCGGAACGCTTAAGATGAATGGAAGCGTCCGTTCTTTGGCATTCGCGGACGATGGACAACAGCTACTGAGCTCTGGCAGTGACGGGCAGGTCTACCACTGGGATTTACGAACAAGAACATGCATCCACAAGGCTGTGGACGAAGGTTGCATCAATGGTACTGCTCTATGTACCTCCCCAAATGGAGCATTGTTTGCAGCTGGTTCTGACAGTGGCATTGTTAACATCTACAACAGACAAGAATTCTTAGGGGGCAAGAAGAAGCCATTGAAAGCCATTGAGAATCTGACCACCAAAGTAGACTTTCTCAAGTTCAACCATGATGCTCAAATATTGGCCATCTGTTCAAGAATGAAGAAAAGTAGTTTGAAGTTGATACACGTTCCTTCTTTTACAATATTTTCGAACTGGCCCCCGCCGAAGAACCTTCAGTACCCTTCATGTTTGGATTTCAGTCCTGAAGGAGGTTACATGGCTGTGGGAAATGCTGCTGGAAAGGTATTATTGTATAAACTACATCATTACCATCATGCTTAGATTTGATCTCCAGATGCTTAATCATTTTGGCTGGAACAGTTTTGACACCTAAATTAGTTATTACATTCAGCTGTTACTTTAGACAAGTTCACTGTAGATCACATGTTTACTCGATTTCTACTAAGATTAACACTTGATTAAGATTAAAACTCGATGTTTCATAATTTGGTATGAAGAAGTACTTTCCTCTGAACCAGGGTTCTTGTAATTGAGAACTTATTGTTATTGCTGTCGTTATTGAGAATTGTTTTATTTTTAAATTATTTTTTCTATTGATTA

mRNA sequence

ATGAGAAACCCCCTCGTCTTCCCCTTTCGGCGAAGAATATCCACGACGGCGCTCCCTGCTCGCGTGAAGAACAGGTGCGCGGCGACAAATACTTCCGGTGGTGGTGACCCACGCGACAACCTCGTCTTCGGCGGCGCGTTTAGGCCTCTAGTGGTGTGGCGACGATTGATTCATTCCGACAACATTGAGTTTTGGAGACTTTTCCGATTTCCAGCAGCGTTTACCCATTCGAAAACTAGACTTTTGAACCACTCCGATTTCGTGACTCGCGCGATTTCAACGTTTTCAGCAAGGTTTTCCTCTTTCGGAGGTAAGTGGAAGATGAGTTTAATATCACAAAATGTTGCTGTAATTAGTAGTATTGAGAAGGATACAGGGGAGAATACTGTTGCCGTGTCATCTCTGTTGAGAAACATAGATGCTAGTGATGTAGAAAACTCTGGTCTAGATACTTATAGCACAAAGAAGAGAAAGAAAGAACATAAAAAAGAAGATGAACACCTAGTAAAAGAACAACAAAAGGAAATGAAGAAGCTCGAAAACTTTCTTTTTGGATCACTCTATTCCCCTGTTGAATTTGGAAAGGATGAAGAGCAAAATGGTTTCAGTTCTGAGGAGAAAGTACCTGCTTTGTACATAATGGACCGTGCTGCGAATATTTCCCTTTCTGCATATGAAGATGATTTTGGGCTCCTAGATGAGAGTGCGAATAAGGAGGAACCTCAGCAAAGAAAACCAGTATGGGTTGATGAGGAAGAGGAGAAGGCCACAGTCAATATTACTAATGTTAGTAGACTGAGAAAATTGAGGAAGGAAGAAGATGAGAATTCGATTTCCGGTTCAGAGTACGTGTCAAGACTGAGGGCTCAGCATGCCAAACTAAACCCAGGCACTGAGTGGGCTCAACTTGATGCACAATCCAGGGATGATAGTGATGATGACGATCTGTCCTCAGATGATGAAAATGCAGTTGCATTGGCTGATGGTCATGATAATGTTGAATCTATTGATGATATCCTTCGAACGAGTGAGAATCTTGTTGTGAAGAGTGGTGCAAAATTGATGCCTGGTCTTCTTGGATACTCGAGACTTGTAGATGCTAATGTAGAGGAGCCATCTAATGGTCCTATCAATTCGGTTCAGTTTCATCGCAATGCTCAGTTACTGCTAGCCACTGGGTTGGATCGAAAGCTTAGATTTTTTCAGATTGATGGTAAACGGAATACCAAAATTCAGAGCATTTTCCTTGAGGATTGCCCCATACGAAAGGCATCATTTCTGCCTGATGGATCTCAGGTTATCATAGCTGGGAGGAGAAAGTTCTTCTATAGCCTCGATCTAGTGAAAGCAAAAGTAGATAAAATTGGCCCTCTTGTAGGTAGAGAGGAGAAAAGCCTTGAAGTTTTTGAAGTTTCTCCTGATTCTAGCACAGTCGCATTTATAGGCAATGAAGGCTATATCCTGTTAGTGTCAACCAAAACAAAGGAGCTCATCGGAACGCTTAAGATGAATGGAAGCGTCCGTTCTTTGGCATTCGCGGACGATGGACAACAGCTACTGAGCTCTGGCAGTGACGGGCAGGTCTACCACTGGGATTTACGAACAAGAACATGCATCCACAAGGCTGTGGACGAAGGTTGCATCAATGGTACTGCTCTATGTACCTCCCCAAATGGAGCATTGTTTGCAGCTGGTTCTGACAGTGGCATTGTTAACATCTACAACAGACAAGAATTCTTAGGGGGCAAGAAGAAGCCATTGAAAGCCATTGAGAATCTGACCACCAAAGTAGACTTTCTCAAGTTCAACCATGATGCTCAAATATTGGCCATCTGTTCAAGAATGAAGAAAAGTAGTTTGAAGTTGATACACGTTCCTTCTTTTACAATATTTTCGAACTGGCCCCCGCCGAAGAACCTTCAGTACCCTTCATGTTTGGATTTCAGTCCTGAAGGAGGTTACATGGCTGTGGGAAATGCTGCTGGAAAGGTATTATTGTATAAACTACATCATTACCATCATGCTTAGATTTGATCTCCAGATGCTTAATCATTTTGGCTGGAACAGTTTTGACACCTAAATTAGTTATTACATTCAGCTGTTACTTTAGACAAGTTCACTGTAGATCACATGTTTACTCGATTTCTACTAAGATTAACACTTGATTAAGATTAAAACTCGATGTTTCATAATTTGGTATGAAGAAGTACTTTCCTCTGAACCAGGGTTCTTGTAATTGAGAACTTATTGTTATTGCTGTCGTTATTGAGAATTGTTTTATTTTTAAATTATTTTTTCTATTGATTA

Coding sequence (CDS)

ATGAGAAACCCCCTCGTCTTCCCCTTTCGGCGAAGAATATCCACGACGGCGCTCCCTGCTCGCGTGAAGAACAGGTGCGCGGCGACAAATACTTCCGGTGGTGGTGACCCACGCGACAACCTCGTCTTCGGCGGCGCGTTTAGGCCTCTAGTGGTGTGGCGACGATTGATTCATTCCGACAACATTGAGTTTTGGAGACTTTTCCGATTTCCAGCAGCGTTTACCCATTCGAAAACTAGACTTTTGAACCACTCCGATTTCGTGACTCGCGCGATTTCAACGTTTTCAGCAAGGTTTTCCTCTTTCGGAGGTAAGTGGAAGATGAGTTTAATATCACAAAATGTTGCTGTAATTAGTAGTATTGAGAAGGATACAGGGGAGAATACTGTTGCCGTGTCATCTCTGTTGAGAAACATAGATGCTAGTGATGTAGAAAACTCTGGTCTAGATACTTATAGCACAAAGAAGAGAAAGAAAGAACATAAAAAAGAAGATGAACACCTAGTAAAAGAACAACAAAAGGAAATGAAGAAGCTCGAAAACTTTCTTTTTGGATCACTCTATTCCCCTGTTGAATTTGGAAAGGATGAAGAGCAAAATGGTTTCAGTTCTGAGGAGAAAGTACCTGCTTTGTACATAATGGACCGTGCTGCGAATATTTCCCTTTCTGCATATGAAGATGATTTTGGGCTCCTAGATGAGAGTGCGAATAAGGAGGAACCTCAGCAAAGAAAACCAGTATGGGTTGATGAGGAAGAGGAGAAGGCCACAGTCAATATTACTAATGTTAGTAGACTGAGAAAATTGAGGAAGGAAGAAGATGAGAATTCGATTTCCGGTTCAGAGTACGTGTCAAGACTGAGGGCTCAGCATGCCAAACTAAACCCAGGCACTGAGTGGGCTCAACTTGATGCACAATCCAGGGATGATAGTGATGATGACGATCTGTCCTCAGATGATGAAAATGCAGTTGCATTGGCTGATGGTCATGATAATGTTGAATCTATTGATGATATCCTTCGAACGAGTGAGAATCTTGTTGTGAAGAGTGGTGCAAAATTGATGCCTGGTCTTCTTGGATACTCGAGACTTGTAGATGCTAATGTAGAGGAGCCATCTAATGGTCCTATCAATTCGGTTCAGTTTCATCGCAATGCTCAGTTACTGCTAGCCACTGGGTTGGATCGAAAGCTTAGATTTTTTCAGATTGATGGTAAACGGAATACCAAAATTCAGAGCATTTTCCTTGAGGATTGCCCCATACGAAAGGCATCATTTCTGCCTGATGGATCTCAGGTTATCATAGCTGGGAGGAGAAAGTTCTTCTATAGCCTCGATCTAGTGAAAGCAAAAGTAGATAAAATTGGCCCTCTTGTAGGTAGAGAGGAGAAAAGCCTTGAAGTTTTTGAAGTTTCTCCTGATTCTAGCACAGTCGCATTTATAGGCAATGAAGGCTATATCCTGTTAGTGTCAACCAAAACAAAGGAGCTCATCGGAACGCTTAAGATGAATGGAAGCGTCCGTTCTTTGGCATTCGCGGACGATGGACAACAGCTACTGAGCTCTGGCAGTGACGGGCAGGTCTACCACTGGGATTTACGAACAAGAACATGCATCCACAAGGCTGTGGACGAAGGTTGCATCAATGGTACTGCTCTATGTACCTCCCCAAATGGAGCATTGTTTGCAGCTGGTTCTGACAGTGGCATTGTTAACATCTACAACAGACAAGAATTCTTAGGGGGCAAGAAGAAGCCATTGAAAGCCATTGAGAATCTGACCACCAAAGTAGACTTTCTCAAGTTCAACCATGATGCTCAAATATTGGCCATCTGTTCAAGAATGAAGAAAAGTAGTTTGAAGTTGATACACGTTCCTTCTTTTACAATATTTTCGAACTGGCCCCCGCCGAAGAACCTTCAGTACCCTTCATGTTTGGATTTCAGTCCTGAAGGAGGTTACATGGCTGTGGGAAATGCTGCTGGAAAGGTATTATTGTATAAACTACATCATTACCATCATGCTTAG

Protein sequence

MRNPLVFPFRRRISTTALPARVKNRCAATNTSGGGDPRDNLVFGGAFRPLVVWRRLIHSDNIEFWRLFRFPAAFTHSKTRLLNHSDFVTRAISTFSARFSSFGGKWKMSLISQNVAVISSIEKDTGENTVAVSSLLRNIDASDVENSGLDTYSTKKRKKEHKKEDEHLVKEQQKEMKKLENFLFGSLYSPVEFGKDEEQNGFSSEEKVPALYIMDRAANISLSAYEDDFGLLDESANKEEPQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEDENSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRDDSDDDDLSSDDENAVALADGHDNVESIDDILRTSENLVVKSGAKLMPGLLGYSRLVDANVEEPSNGPINSVQFHRNAQLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGSVRSLAFADDGQQLLSSGSDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKNLQYPSCLDFSPEGGYMAVGNAAGKVLLYKLHHYHHA

Homology

[Close]

BLAST of Clc02G13040 vs. NCBI nr
Match: XP_038901788.1 (U3 small nucleolar RNA-associated protein 18 homolog [Benincasa hispida] >XP_038901789.1 U3 small nucleolar RNA-associated protein 18 homolog [Benincasa hispida] >XP_038901790.1 U3 small nucleolar RNA-associated protein 18 homolog [Benincasa hispida] >XP_038901791.1 U3 small nucleolar RNA-associated protein 18 homolog [Benincasa hispida] >XP_038901792.1 U3 small nucleolar RNA-associated protein 18 homolog [Benincasa hispida] >XP_038901794.1 U3 small nucleolar RNA-associated protein 18 homolog [Benincasa hispida] >XP_038901795.1 U3 small nucleolar RNA-associated protein 18 homolog [Benincasa hispida] >XP_038901796.1 U3 small nucleolar RNA-associated protein 18 homolog [Benincasa hispida])

HSP 1 Score: 1034.6 bits (2674), Expect = 3.7e-298
Identity = 539/569 (94.73%), Postives = 547/569 (96.13%), Query Frame = 0


Query: 108 MSLISQNVAVISSIEKDTGENTVAVSSLLRNIDASDVENSGLDTYSTKKRKKEHKKEDEH 167
           MSLISQNVAVISSIEK TGE+TV +SSL RN DASDVENS LDT   KKRKKEHKKEDE 
Sbjct: 1   MSLISQNVAVISSIEKVTGEDTVGLSSLSRNRDASDVENSVLDTTRGKKRKKEHKKEDEQ 60

Query: 168 LVKEQQKEMKKLENFLFGSLYSPVEFGKDEEQNGFSSEEKVPALYIMDRAANISLSAYED 227
           LVKEQQKEMKKLENFLFGSLYSPVEFGKDEE+NGFSSEEKVPALYIMDR+AN SLSAYE+
Sbjct: 61  LVKEQQKEMKKLENFLFGSLYSPVEFGKDEERNGFSSEEKVPALYIMDRSANNSLSAYEE 120

Query: 228 DFGLLDESANKEEPQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEDENSISGSEYVSRL 287
           DF LLDES NKEE QQRKPVWVDEEEEKATVNITNVSRLRKLRKE DEN ISGSEYVSRL
Sbjct: 121 DFELLDESMNKEELQQRKPVWVDEEEEKATVNITNVSRLRKLRKEGDENLISGSEYVSRL 180

Query: 288 RAQHAKLNPGTEWAQLDAQSRDDSDDDDLSSDDENAVALADGHDNVESIDDILRTSENLV 347
           RAQHAKLNPGTEWAQLDA SR DSDDDDLSSDDENAVALADG+ NV+SIDDILRTSENLV
Sbjct: 181 RAQHAKLNPGTEWAQLDAPSRADSDDDDLSSDDENAVALADGYANVDSIDDILRTSENLV 240

Query: 348 VKSGAKLMPGLLGYSRLVDANVEEPSNGPINSVQFHRNAQLLLATGLDRKLRFFQIDGKR 407
           VKSGAKLMPGLLGYSRLVDAN EEPSNGPINSVQFHRNAQLLLATGLDRKLRFFQIDGKR
Sbjct: 241 VKSGAKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNAQLLLATGLDRKLRFFQIDGKR 300

Query: 408 NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE 467
           NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE
Sbjct: 301 NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE 360

Query: 468 VFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGSVRSLAFADDGQQLLSSGSDGQ 527
           VFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGSVRSLAFADDG+QLLSSG DGQ
Sbjct: 361 VFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGSVRSLAFADDGRQLLSSGGDGQ 420

Query: 528 VYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPL 587
           VYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPL
Sbjct: 421 VYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPL 480

Query: 588 KAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPP-KNLQYPSCL 647
           KAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPP KNLQYPSCL
Sbjct: 481 KAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSCL 540

Query: 648 DFSPEGGYMAVGNAAGKVLLYKLHHYHHA 676
           DFSPEGGYMAVGNAAGKVLLYKLHHY HA
Sbjct: 541 DFSPEGGYMAVGNAAGKVLLYKLHHYQHA 569

[Close]

BLAST of Clc02G13040 vs. NCBI nr
Match: XP_008457746.1 (PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog [Cucumis melo])

HSP 1 Score: 1022.3 bits (2642), Expect = 1.9e-294
Identity = 524/569 (92.09%), Postives = 543/569 (95.43%), Query Frame = 0


Query: 108 MSLISQNVAVISSIEKDTGENTVAVSSLLRNIDASDVENSGLDTYSTKKRKKEHKKEDEH 167
           MSLISQNVAVISSIEK T ENT+  SS LRN DAS+V+ SGLDT   KKRKKEH+KEDE 
Sbjct: 1   MSLISQNVAVISSIEKGTEENTLGPSSPLRNADASEVDKSGLDTSRAKKRKKEHRKEDEQ 60

Query: 168 LVKEQQKEMKKLENFLFGSLYSPVEFGKDEEQNGFSSEEKVPALYIMDRAANISLSAYED 227
           LV+EQQKEM KLENFLFGSLYSPVEFGKDEEQNGF+SEEK+PALYIMDR+A+ SLSAYED
Sbjct: 61  LVQEQQKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEKIPALYIMDRSADNSLSAYED 120

Query: 228 DFGLLDESANKEEPQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEDENSISGSEYVSRL 287
           D+ +LDES NKEE QQRKPVWVDEEEEKATVNITNVSRLRKLRKEEDENSISGS YVSRL
Sbjct: 121 DYRVLDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEDENSISGSVYVSRL 180

Query: 288 RAQHAKLNPGTEWAQLDAQSRDDSDDDDLSSDDENAVALADGHDNVESIDDILRTSENLV 347
           RAQHAKLNPGTEWAQLDAQSR DSDDDD+ SDDENAVALA G+DNV+SIDDILRTSENLV
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRGDSDDDDILSDDENAVALAGGYDNVDSIDDILRTSENLV 240

Query: 348 VKSGAKLMPGLLGYSRLVDANVEEPSNGPINSVQFHRNAQLLLATGLDRKLRFFQIDGKR 407
           VKSG KLMPGLLGYSRLVDAN EEPSNGPINSVQFHRN+QLLLATGLDRKLRFFQIDGKR
Sbjct: 241 VKSGGKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKR 300

Query: 408 NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE 467
           NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE
Sbjct: 301 NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE 360

Query: 468 VFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGSVRSLAFADDGQQLLSSGSDGQ 527
            FEVSPDSST+AFIGNEGYILLVS KTKELIGTLKMNGSVRSLAFADDG+QLLSSG DGQ
Sbjct: 361 AFEVSPDSSTIAFIGNEGYILLVSIKTKELIGTLKMNGSVRSLAFADDGRQLLSSGGDGQ 420

Query: 528 VYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPL 587
           +YHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPL
Sbjct: 421 IYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPL 480

Query: 588 KAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPP-KNLQYPSCL 647
           KAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIH+PSFTIFSNWPPP KNLQYPSCL
Sbjct: 481 KAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHIPSFTIFSNWPPPKKNLQYPSCL 540

Query: 648 DFSPEGGYMAVGNAAGKVLLYKLHHYHHA 676
           DFSPEGGYMAVGNAAGKVLLYKLHHYHHA
Sbjct: 541 DFSPEGGYMAVGNAAGKVLLYKLHHYHHA 569

[Close]

BLAST of Clc02G13040 vs. NCBI nr
Match: XP_038888553.1 (U3 small nucleolar RNA-associated protein 18 homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 1019.2 bits (2634), Expect = 1.6e-293
Identity = 523/569 (91.92%), Postives = 540/569 (94.90%), Query Frame = 0


Query: 108 MSLISQNVAVISSIEKDTGENTVAVSSLLRNIDASDVENSGLDTYSTKKRKKEHKKEDEH 167
           MSLISQNVAVISS+E  TGEN V +SS LRN+DASDVENSGLDT   KKRKKEHKKEDE 
Sbjct: 1   MSLISQNVAVISSMENVTGENIVGLSSPLRNVDASDVENSGLDTTRVKKRKKEHKKEDEQ 60

Query: 168 LVKEQQKEMKKLENFLFGSLYSPVEFGKDEEQNGFSSEEKVPALYIMDRAANISLSAYED 227
           LVKEQQKEMKKLE FLFGSLYSPVEFGKDEEQNGFSS+EKVPALYIMDR+AN SLSAYE 
Sbjct: 61  LVKEQQKEMKKLETFLFGSLYSPVEFGKDEEQNGFSSDEKVPALYIMDRSANNSLSAYEG 120

Query: 228 DFGLLDESANKEEPQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEDENSISGSEYVSRL 287
           DFGL+ ES N++EPQQRKP WVDEEEEKATVNITNVSRLRKLRKEEDENSISGSEYV RL
Sbjct: 121 DFGLIHESTNEKEPQQRKPAWVDEEEEKATVNITNVSRLRKLRKEEDENSISGSEYVLRL 180

Query: 288 RAQHAKLNPGTEWAQLDAQSRDDSDDDDLSSDDENAVALADGHDNVESIDDILRTSENLV 347
           RAQHAKLNPGTEWAQLDAQSR  SDDDD SSDDE+AV LADGHDNV+SIDDILRTSENL 
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRGGSDDDDQSSDDESAVTLADGHDNVDSIDDILRTSENLA 240

Query: 348 VKSGAKLMPGLLGYSRLVDANVEEPSNGPINSVQFHRNAQLLLATGLDRKLRFFQIDGKR 407
           VK GAKL+PGLL YSRLVDAN EEPSNGPINSVQFH NAQLLLATGLDRKLRFFQIDGKR
Sbjct: 241 VKRGAKLLPGLLEYSRLVDANAEEPSNGPINSVQFHHNAQLLLATGLDRKLRFFQIDGKR 300

Query: 408 NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE 467
           N KIQSIFLEDCPI+KASFLP+GSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGR+EKSLE
Sbjct: 301 NMKIQSIFLEDCPIQKASFLPNGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGRDEKSLE 360

Query: 468 VFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGSVRSLAFADDGQQLLSSGSDGQ 527
           VFEVSPDSST+AFIGNEGYILLVSTKTKELIGTLKMNGSVRSLAFADDG+QLLSSG DGQ
Sbjct: 361 VFEVSPDSSTIAFIGNEGYILLVSTKTKELIGTLKMNGSVRSLAFADDGRQLLSSGGDGQ 420

Query: 528 VYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPL 587
           VYHWDLRTRTCIHK VDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPL
Sbjct: 421 VYHWDLRTRTCIHKGVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPL 480

Query: 588 KAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPP-KNLQYPSCL 647
           +AIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPP KNLQYPSCL
Sbjct: 481 RAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSCL 540

Query: 648 DFSPEGGYMAVGNAAGKVLLYKLHHYHHA 676
           DFSPEGGYMAVGNAAGKVLLYKLHHYHHA
Sbjct: 541 DFSPEGGYMAVGNAAGKVLLYKLHHYHHA 569

[Close]

BLAST of Clc02G13040 vs. NCBI nr
Match: XP_023511721.1 (U3 small nucleolar RNA-associated protein 18 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1014.2 bits (2621), Expect = 5.1e-292
Identity = 524/570 (91.93%), Postives = 543/570 (95.26%), Query Frame = 0


Query: 108 MSLISQNVAVISSIEKDTGENTVAVSSLLRNIDASDVENSGLDTYSTKKRKKEHKKEDEH 167
           MSLISQNVAVISS EK  G+NTV  SSLLR +DASDVENSG DT   KKRKKEHKKEDE 
Sbjct: 1   MSLISQNVAVISSTEKVNGDNTVGSSSLLRKVDASDVENSGADTTRAKKRKKEHKKEDEQ 60

Query: 168 LVKEQQKEMKKLENFLFGSLYSPVEFGKDEEQNGFSSEEKVPALYIMDRAANISLSAYED 227
           +VKEQQKEM+KLENFLFGSLYSPVEFGKDEE+N FS+EEK PALYIMDR+AN SLS YE+
Sbjct: 61  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN 120

Query: 228 DFGLLDESANKEEPQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEDENSISGSEYVSRL 287
           D GLLDES++KEE QQRKPVWVDEEEEKA+VNITNVSRLRKLRKEEDE SISGSEYVSRL
Sbjct: 121 DVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 180

Query: 288 RAQHAKLNPGTEWAQLDAQSRDDS-DDDDLSSDDENAVALADGHDNVESIDDILRTSENL 347
           RAQHAKLNPGTEWAQLDAQSR  S DDDDLSSDDENAVALADG+DNV+SIDDILRT+ENL
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRGGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENL 240

Query: 348 VVKSGAKLMPGLLGYSRLVDANVEEPSNGPINSVQFHRNAQLLLATGLDRKLRFFQIDGK 407
           V KSGAKL+PGLL YSRLVDAN +EPSNGPI+SVQFHRNAQLLLATGLDRKLRFFQIDGK
Sbjct: 241 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 300

Query: 408 RNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 467
           RNTKIQSIFLEDCPIRKASFLPDGSQVII+GRRKFFYSLDLVKAKVDKIGPLVGREEKSL
Sbjct: 301 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 360

Query: 468 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGSVRSLAFADDGQQLLSSGSDG 527
           EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNG+VRSLAFADDGQQLLSSG DG
Sbjct: 361 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGQQLLSSGGDG 420

Query: 528 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 587
           QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP
Sbjct: 421 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 480

Query: 588 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPP-KNLQYPSC 647
           LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPP KNLQYPSC
Sbjct: 481 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 540

Query: 648 LDFSPEGGYMAVGNAAGKVLLYKLHHYHHA 676
           LDFSPEGGYMAVGNAAGKVLLYKLHHY HA
Sbjct: 541 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 570

[Close]

BLAST of Clc02G13040 vs. NCBI nr
Match: KAG7011246.1 (U3 small nucleolar RNA-associated protein 18-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1013.8 bits (2620), Expect = 6.7e-292
Identity = 525/590 (88.98%), Postives = 555/590 (94.07%), Query Frame = 0


Query: 88  VTRAISTFSARFSSFGGKWKMSLISQNVAVISSIEKDTGENTVAVSSLLRNIDASDVENS 147
           ++ A++ F   F + G +WKMSLISQNVAVISSIEK T +NTV  SS LR +DASDVENS
Sbjct: 109 LSHALAKFFGAF-TIGAEWKMSLISQNVAVISSIEKVTEDNTVVSSSPLRKVDASDVENS 168

Query: 148 GLDTYSTKKRKKEHKKEDEHLVKEQQKEMKKLENFLFGSLYSPVEFGKDEEQNGFSSEEK 207
           G+DT   KKRKKEHKKEDE +VKEQQKEM+KLENFLFGSLYSPVEFGKDEE+NGFS+EEK
Sbjct: 169 GVDTTRAKKRKKEHKKEDEQIVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEK 228

Query: 208 VPALYIMDRAANISLSAYEDDFGLLDESANKEEPQQRKPVWVDEEEEKATVNITNVSRLR 267
             ALYIMDR+AN SLS YE+D GLLDES+ KEE QQRKPVWVDEEEEKA+VNITNVSRLR
Sbjct: 229 DSALYIMDRSANNSLSVYENDVGLLDESSIKEEAQQRKPVWVDEEEEKASVNITNVSRLR 288

Query: 268 KLRKEEDENSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRDDS-DDDDLSSDDENAVAL 327
           KLRKEEDE SISGSEYVSRLRAQHAKLNPGTEWAQLDAQSR  S DDDDL+SDDENAVAL
Sbjct: 289 KLRKEEDEKSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVAL 348

Query: 328 ADGHDNVESIDDILRTSENLVVKSGAKLMPGLLGYSRLVDANVEEPSNGPINSVQFHRNA 387
           ADG+DNV+SIDDILRT+ENLV KSGAKL+PGLL YSRLVDAN +EP+NGPI+SVQFHRNA
Sbjct: 349 ADGYDNVDSIDDILRTNENLVAKSGAKLLPGLLEYSRLVDANAQEPANGPIHSVQFHRNA 408

Query: 388 QLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLD 447
           QLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVII+GRR+FFYSLD
Sbjct: 409 QLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSLD 468

Query: 448 LVKAKVDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGS 507
           LVKAKVDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNG+
Sbjct: 469 LVKAKVDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGT 528

Query: 508 VRSLAFADDGQQLLSSGSDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGS 567
           VRSLAFAD+G+QLLSSG DGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGS
Sbjct: 529 VRSLAFADNGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGS 588

Query: 568 DSGIVNIYNRQEFLGGKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVP 627
           DSGIVNIYNRQEFLGGKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVP
Sbjct: 589 DSGIVNIYNRQEFLGGKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVP 648

Query: 628 SFTIFSNWPPP-KNLQYPSCLDFSPEGGYMAVGNAAGKVLLYKLHHYHHA 676
           SFTIFSNWPPP KNLQYPSCLDFSPEGGYMAVGNAAGKVLLYKLHHY HA
Sbjct: 649 SFTIFSNWPPPKKNLQYPSCLDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 697

[Close]

BLAST of Clc02G13040 vs. ExPASy Swiss-Prot
Match: Q9FMU5 (U3 small nucleolar RNA-associated protein 18 homolog OS=Arabidopsis thaliana OX=3702 GN=At5g14050 PE=1 SV=1)

HSP 1 Score: 663.7 bits (1711), Expect = 2.2e-189
Identity = 353/546 (64.65%), Postives = 424/546 (77.66%), Query Frame = 0


Query: 140 DASDVENSGLDTYSTKKRKKEHKKEDEHLVKEQQKEMKKLENFLFGSLYSPVEFGKDEEQ 199
           D  D E  G D   T+ ++++ +KE + L + +  EMKKLEN +FGSLYSPV FGK+EE+
Sbjct: 24  DVEDEEEIGSDDDLTRGKRRKTEKEKQKLEESELVEMKKLENLIFGSLYSPVTFGKEEEE 83

Query: 200 NGFSSEEKVPALYIMDRAANISLSAYEDDFGLLDESANKEEPQQ------RKPVWVDEEE 259
           +G        AL+ +DR+A   +  YEDD G  DE  + EE  Q       +  W DEEE
Sbjct: 84  DG-------SALFHVDRSAVRQIPDYEDD-GDDDEELSDEENGQVVAIRKGEAAWEDEEE 143

Query: 260 EKATVNITNVSRLRKLRKEEDENSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRD--DS 319
           ++  V+I +V+RLRKLRKEE+E  ISGSEY++RLRA HAKLNPGT+WA+ D+Q  D   S
Sbjct: 144 KQINVDIASVNRLRKLRKEENEGLISGSEYIARLRAHHAKLNPGTDWARPDSQIVDGESS 203

Query: 320 DDDDLSSDDENAVALADGHDNVESIDDILRTSENLVVKS-GAKLMPGLLGYSRLVDANVE 379
           DDDD            DG      +DDILRT+E+LVVKS G KL  G L YS+LVDAN  
Sbjct: 204 DDDDTQ----------DG-----GVDDILRTNEDLVVKSRGNKLCAGRLEYSKLVDANAA 263

Query: 380 EPSNGPINSVQFHRNAQLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDG 439
           +PSNGPINSV FH+NAQLLL  GLDR+LRFFQIDGKRNTKIQSIFLEDCPIRKA+FLP+G
Sbjct: 264 DPSNGPINSVHFHQNAQLLLTAGLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKAAFLPNG 323

Query: 440 SQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLV 499
           SQVI++GRRKFFYS DL KAK DKIGPLVGREEKSLE FEVS DS+T+AF+GNEGYILLV
Sbjct: 324 SQVIVSGRRKFFYSFDLEKAKFDKIGPLVGREEKSLEYFEVSQDSNTIAFVGNEGYILLV 383

Query: 500 STKTKELIGTLKMNGSVRSLAFADDGQQLLSSGSDGQVYHWDLRTRTCIHKAVDEGCING 559
           STKTKELIGTLKMNGSVRSLAF++DG+ LLSSG DGQVY WDLRT  C++K VDEG   G
Sbjct: 384 STKTKELIGTLKMNGSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCG 443

Query: 560 TALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPLKAIENLTTKVDFLKFNHDAQILA 619
           T+LC+S NGALFA+G+D GIVNIY + EF+GGK+KP+K ++NLT+K+DF+KFNHDAQILA
Sbjct: 444 TSLCSSLNGALFASGTDRGIVNIYKKSEFVGGKRKPIKTVDNLTSKIDFMKFNHDAQILA 503

Query: 620 ICSRMKKSSLKLIHVPSFTIFSNWPPPKN-LQYPSCLDFSPEGGYMAVGNAAGKVLLYKL 676
           I S M K+S+KL+HVPS T+FSNWPPP + + YP CLDFSP  G+MA+GNAAGKVLLYKL
Sbjct: 504 IVSTMNKNSVKLVHVPSLTVFSNWPPPNSTMHYPRCLDFSPGSGFMAMGNAAGKVLLYKL 546

[Close]

BLAST of Clc02G13040 vs. ExPASy Swiss-Prot
Match: Q9Y5J1 (U3 small nucleolar RNA-associated protein 18 homolog OS=Homo sapiens OX=9606 GN=UTP18 PE=1 SV=3)

HSP 1 Score: 300.4 bits (768), Expect = 5.0e-80
Identity = 176/448 (39.29%), Postives = 258/448 (57.59%), Query Frame = 0


Query: 232 LDESANKEEPQQRKPVWVDEE-EEKATVNITNVSRLRKLRKEEDENSISGSEYVSRLRA- 291
           ++  A    P Q+KPVWVDEE E++  V++ N    + + K   E+ +S      RL+  
Sbjct: 126 VENEAKGNFPPQKKPVWVDEEDEDEEMVDMMNNRFRKDMMKNASESKLSKDNLKKRLKEE 185

Query: 292 -QHAKLNPGTEWAQLDAQSRDDSDDDDLSSDDENAVALADGHDNVESIDDILRTSENLVV 351
            QHA +     WA+    ++  +  DD S +DE               DD+L+ + N  +
Sbjct: 186 FQHA-MGGVPAWAE---TTKRKTSSDDESEEDE---------------DDLLQRTGNF-I 245

Query: 352 KSGAKLMPGLLGYSRLVDANVEEPSNGPINSVQFHRNAQLLLATGLDRKLRFFQIDGKRN 411
            +   L  G+L       AN E P+   I+SVQFH  AQ+++  GLD  +  FQ+DGK N
Sbjct: 246 STSTSLPRGILKMKNCQHANAERPTVARISSVQFHPGAQIVMVAGLDNAVSLFQVDGKTN 305

Query: 412 TKIQSIFLEDCPIRKASFLPDGSQVIIAG-RRKFFYSLDLVKAKVDKIGPLVGREEKSLE 471
            KIQSI+LE  PI KA F  +G +V+      K  Y  D++  K+  +  + G +EK + 
Sbjct: 306 PKIQSIYLERFPIFKACFSANGEEVLATSTHSKVLYVYDMLAGKLIPVHQVRGLKEKIVR 365

Query: 472 VFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGSVRSLAFADDGQQLLSSGSDGQ 531
            FEVSPD S +   G  GY+ L++ KTKELIG++K+NG V +  F+ D +++ +S  DG+
Sbjct: 366 SFEVSPDGSFLLINGIAGYLHLLAMKTKELIGSMKINGRVAASTFSSDSKKVYASSGDGE 425

Query: 532 VYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFL-GGKKKP 591
           VY WD+ +R C+++ VDEG + G ++ TS NG   A GS+ G+VNIYN+   L     KP
Sbjct: 426 VYVWDVNSRKCLNRFVDEGSLYGLSIATSRNGQYVACGSNCGVVNIYNQDSCLQETNPKP 485

Query: 592 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWP--PPKNLQYPS 651
           +KAI NL T V  L FN   +ILAI S   K +++L+H+PS T+FSN+P    KN+ +  
Sbjct: 486 IKAIMNLVTGVTSLTFNPTTEILAIASEKMKEAVRLVHLPSCTVFSNFPVIKNKNISHVH 545

Query: 652 CLDFSPEGGYMAVGNAAGKVLLYKLHHY 673
            +DFSP  GY A+GN  GK L+Y+LHHY
Sbjct: 546 TMDFSPRSGYFALGNEKGKALMYRLHHY 553

[Close]

BLAST of Clc02G13040 vs. ExPASy Swiss-Prot
Match: Q5SSI6 (U3 small nucleolar RNA-associated protein 18 homolog OS=Mus musculus OX=10090 GN=Utp18 PE=1 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.5e-79
Identity = 176/475 (37.05%), Postives = 274/475 (57.68%), Query Frame = 0


Query: 205 EEKVPALYIMDRAANISLSAYEDDFGLLDESANKEEPQQRKPVWVDEEEEKATVNITNVS 264
           E+   AL    R++   L    D+  + +E+ +    ++++PVWVDE++E   +   + +
Sbjct: 94  EDDEDALLQRLRSSRGQLHGSSDESEVENEAKDIFSQKKKQPVWVDEDDEDEEIVDMSNN 153

Query: 265 RLRK-LRKEEDENSISGSEYVSRLRA--QHAKLNPGTEWAQLDAQSRDDSDDDDLSSDDE 324
           R RK + K   E+ +S  +   RL+   QHA +    +WA+  ++ R  SDD+  S +DE
Sbjct: 154 RFRKDIMKNASESKLSKDKLQKRLKEEFQHA-MGGVPDWAEAGSKRRTSSDDE--SEEDE 213

Query: 325 NAVALADGHDNVESIDDILRTSENLVVKSGAKLMPGLLGYSRLVDANVEEPSNGPINSVQ 384
                          DD+L+ + N  + +   L  G+L       AN E P+   I+SVQ
Sbjct: 214 ---------------DDLLQRTGNF-ISTSTSLPRGILKMKNCRPANAERPTTARISSVQ 273

Query: 385 FHRNAQLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIIAG-RRK 444
           FH  AQ+++ +G+D  +  FQ+DGK N KIQSI+LE  PI KA F  +G +V+      K
Sbjct: 274 FHPGAQVVMVSGVDNAISLFQVDGKTNPKIQSIYLEKFPIFKACFSANGEEVLATSMHSK 333

Query: 445 FFYSLDLVKAKVDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGT 504
             Y  D++  K+  +  + G +EK+++ FEVSPD S +   G  G+  L+S KTKELIG+
Sbjct: 334 VLYVYDMLAGKLIPVHQVRGLKEKTVKQFEVSPDGSFLLISGIAGFSHLLSMKTKELIGS 393

Query: 505 LKMNGSVRSLAFADDGQQLLSSGSDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGA 564
           +K+NG + +  F+ D +++ +   +G+VY WD+ +R C+++ +DEG + G ++  S NG 
Sbjct: 394 MKINGRIAASTFSSDSKRIYTYSENGEVYVWDVNSRKCMNRFLDEGSLCGLSIAASKNGQ 453

Query: 565 LFAAGSDSGIVNIYNRQEFL-GGKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSS 624
             A GS SG+VNIYN+   L     KP+KAI NL T V  L FN   +ILA+ SR  K +
Sbjct: 454 YVACGSKSGVVNIYNQDSCLQQTNPKPIKAIMNLVTGVTSLAFNPTTEILAVASRKMKEA 513

Query: 625 LKLIHVPSFTIFSNWPPPK--NLQYPSCLDFSPEGGYMAVGNAAGKVLLYKLHHY 673
           ++L+H+PS T+FSN+P  K   L     +DFSP GGY A+GN  G+ L+Y+LHHY
Sbjct: 514 VRLVHLPSCTVFSNFPVFKKSTLSRVQTMDFSPRGGYFALGNEKGRALMYRLHHY 549

[Close]

BLAST of Clc02G13040 vs. ExPASy Swiss-Prot
Match: P78750 (Probable U3 small nucleolar RNA-associated protein 18 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC29A3.06 PE=2 SV=3)

HSP 1 Score: 275.0 bits (702), Expect = 2.2e-72
Identity = 173/528 (32.77%), Postives = 276/528 (52.27%), Query Frame = 0


Query: 171 EQQKEMKKLENFLFGSLYSPVEFGKDEEQNGFSSEEKVPALYIMDRAANISLSAYED--- 230
           E+  E  +LEN +FG++ +   F   E +       + P L   + A    L   ED   
Sbjct: 2   EKDTEELELENAVFGNINNFSSFLDKENETFDVMMNEAPELSEDNDAQEDELEKLEDAEL 61

Query: 231 ---DFGLLDESANK---------------EEPQQRKP-VWVDEEEEKATVNITNVSRLRK 290
              D G  D + +                EE     P +W D ++E+  +++ + SRLRK
Sbjct: 62  FMFDTGSADGAKDSVPLDIIAGDNTVKEDEEASNEIPSIWEDSDDERLMISLQDHSRLRK 121

Query: 291 LRKEEDENSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRDDSDDDDLSSDDENAVALAD 350
           LR+ EDE+ ++G +Y  RLR Q  ++ P  EWA+            D++ +++   AL++
Sbjct: 122 LRQYEDEDMVNGLQYARRLRTQFERVYPVPEWAK----------KQDVTEEEDEFNALSE 181

Query: 351 GHDNVESIDDILRTSENLVVKSGAKLMPGLLGYSRLVDANVEEPSNGPINSVQFHRNAQL 410
                +S+  + ++S + + +S   L PG +   RL DAN + PS+  I  +  H    L
Sbjct: 182 KSVIPKSLKSLFKSSVSYINQSSKLLAPGTINIKRLKDANFQAPSHSGIRCMSIHPYFPL 241

Query: 411 LLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLV 470
           LL  G DR LR +Q+DGK N  + S+ L    ++ A F PDG +VI AGRRK+ Y  DL 
Sbjct: 242 LLTCGFDRTLRIYQLDGKVNPLVTSLHLRSSALQTALFHPDGKRVIAAGRRKYMYIWDLE 301

Query: 471 KAKVDKIGPLVGRE--EKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGS 530
            A+V K+  + G+E  + S+E F V P    +A  G  G+I L+   T +   + K+ G 
Sbjct: 302 SAQVQKVSRMYGQENFQPSMERFHVDPTGKYIALEGRSGHINLLHALTGQFATSFKIEGV 361

Query: 531 VRSLAFADDGQQLLSSGSDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGS 590
           +  + F  DG ++L      +V+H+++  R+ + +   +  ++ T  C  P+    A GS
Sbjct: 362 LSDVLFTSDGSEMLVLSYGAEVWHFNVEQRSVVRRWQVQDGVSTTHFCLDPSNKYLAIGS 421

Query: 591 DSGIVNIYNRQ-EFLGGKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHV 650
            SGIVNIY+ Q        KP+  ++N+T  ++ + F+ D+Q+LAI SR KK +L+L+HV
Sbjct: 422 KSGIVNIYDLQTSNADAAPKPVTTLDNITFSINSMSFSQDSQVLAIASRGKKDTLRLVHV 481

Query: 651 PSFTIFSNWPPPKN-LQYPSCLDFSPEGGYMAVGNAAGKVLLYKLHHY 673
           PSF++F NWP     L   +CL F  +GG + VGN AG+V L+KL HY
Sbjct: 482 PSFSVFRNWPTSATPLGRVTCLAFG-KGGELCVGNEAGRVGLWKLAHY 518

[Close]

BLAST of Clc02G13040 vs. ExPASy Swiss-Prot
Match: P40362 (U3 small nucleolar RNA-associated protein 18 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UTP18 PE=1 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 9.4e-55
Identity = 171/535 (31.96%), Postives = 262/535 (48.97%), Query Frame = 0


Query: 195 KDEEQNGFSSEEKVPALYIMDRAAN-ISLSAYEDDFGLLDE---SANKEEPQQRKPVWVD 254
           +DE QNG         L+ +D   N  S    ED   + DE   S++       +  W+D
Sbjct: 68  EDEAQNGELDHVNNDQLFFVDDGGNEDSQDKNEDTMDVDDEDDSSSDDYSEDSEEAAWID 127

Query: 255 EEEEKATVNITNVSRLRKLRKEEDENSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRDD 314
            ++EK  V I   ++ +KLR   +E+ I+G  Y++RLR+Q  K+ P  +W   ++ S  D
Sbjct: 128 SDDEKIKVPILVTNKTKKLRTSYNESKINGVHYINRLRSQFEKIYPRPKWVDDESDSELD 187

Query: 315 SDDDDLSSDDENAVALADGHDNVESIDDILRTSENL--VVKSGAKLMPGLLGYSRLVDAN 374
            ++DD      N +     + ++ ++  IL T+ N    + +   L P  L   RL DAN
Sbjct: 188 DEEDDEEEGSNNVI-----NGDINALTKILSTTYNYKDTLSNSKLLPPKKLDIVRLKDAN 247

Query: 375 VEEPSNGPINSVQFHRNAQLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLP 434
              PS+  I S+ FH +  LLL  G D+ LR + IDGK N  + S+ L   PI+  +F  
Sbjct: 248 ASHPSHSAIQSLSFHPSKPLLLTGGYDKTLRIYHIDGKTNHLVTSLHLVGSPIQTCTFYT 307

Query: 435 DGS-----QVIIAGRRKFFYSLDL--------VKAKVDKIGPLVGRE--EKSLEVFEVS- 494
             S      +  AGRR++ +S DL          AK++K   L G E  ++S E F+V+ 
Sbjct: 308 SLSNQNQQNIFTAGRRRYMHSWDLSLENLTHSQTAKIEKFSRLYGHESTQRSFENFKVAH 367

Query: 495 -PDSST------VAFIGNEGYI-LLVSTKTKELIGTLKMNGSVRSLAFADDGQQ------ 554
             +S T      V   GN G+I +L ST    L+G  K+ G +    F  D Q       
Sbjct: 368 LQNSQTNSVHGIVLLQGNNGWINILHSTSGLWLMG-CKIEGVITD--FCIDYQPISRGKF 427

Query: 555 ---LLSSGSDGQVYHWDL-RTRTCIHKAVDEG-------CINGTALCTSP--------NG 614
              L++  + G+V+ +DL +    I +  D+G        + G    T P          
Sbjct: 428 RTILIAVNAYGEVWEFDLNKNGHVIRRWKDQGGVGITKIQVGGGTTTTCPALQISKIKQN 487

Query: 615 ALFAAGSDSGIVNIYNRQEFL-GGKKKPLKAIENLTTKVDFLKFNHDAQILAICSRMKKS 673
              A GS+SG VN+Y+R   +      P+ A++ LTT +  L+F+ D QIL + SR  K 
Sbjct: 488 RWLAVGSESGFVNLYDRNNAMTSSTPTPVAALDQLTTTISNLQFSPDGQILCMASRAVKD 547

[Close]

BLAST of Clc02G13040 vs. ExPASy TrEMBL
Match: A0A1S3C7I9 (U3 small nucleolar RNA-associated protein 18 homolog OS=Cucumis melo OX=3656 GN=LOC103497366 PE=4 SV=1)

HSP 1 Score: 1022.3 bits (2642), Expect = 9.1e-295
Identity = 524/569 (92.09%), Postives = 543/569 (95.43%), Query Frame = 0


Query: 108 MSLISQNVAVISSIEKDTGENTVAVSSLLRNIDASDVENSGLDTYSTKKRKKEHKKEDEH 167
           MSLISQNVAVISSIEK T ENT+  SS LRN DAS+V+ SGLDT   KKRKKEH+KEDE 
Sbjct: 1   MSLISQNVAVISSIEKGTEENTLGPSSPLRNADASEVDKSGLDTSRAKKRKKEHRKEDEQ 60

Query: 168 LVKEQQKEMKKLENFLFGSLYSPVEFGKDEEQNGFSSEEKVPALYIMDRAANISLSAYED 227
           LV+EQQKEM KLENFLFGSLYSPVEFGKDEEQNGF+SEEK+PALYIMDR+A+ SLSAYED
Sbjct: 61  LVQEQQKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEKIPALYIMDRSADNSLSAYED 120

Query: 228 DFGLLDESANKEEPQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEDENSISGSEYVSRL 287
           D+ +LDES NKEE QQRKPVWVDEEEEKATVNITNVSRLRKLRKEEDENSISGS YVSRL
Sbjct: 121 DYRVLDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEDENSISGSVYVSRL 180

Query: 288 RAQHAKLNPGTEWAQLDAQSRDDSDDDDLSSDDENAVALADGHDNVESIDDILRTSENLV 347
           RAQHAKLNPGTEWAQLDAQSR DSDDDD+ SDDENAVALA G+DNV+SIDDILRTSENLV
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRGDSDDDDILSDDENAVALAGGYDNVDSIDDILRTSENLV 240

Query: 348 VKSGAKLMPGLLGYSRLVDANVEEPSNGPINSVQFHRNAQLLLATGLDRKLRFFQIDGKR 407
           VKSG KLMPGLLGYSRLVDAN EEPSNGPINSVQFHRN+QLLLATGLDRKLRFFQIDGKR
Sbjct: 241 VKSGGKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKR 300

Query: 408 NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE 467
           NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE
Sbjct: 301 NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE 360

Query: 468 VFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGSVRSLAFADDGQQLLSSGSDGQ 527
            FEVSPDSST+AFIGNEGYILLVS KTKELIGTLKMNGSVRSLAFADDG+QLLSSG DGQ
Sbjct: 361 AFEVSPDSSTIAFIGNEGYILLVSIKTKELIGTLKMNGSVRSLAFADDGRQLLSSGGDGQ 420

Query: 528 VYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPL 587
           +YHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPL
Sbjct: 421 IYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPL 480

Query: 588 KAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPP-KNLQYPSCL 647
           KAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIH+PSFTIFSNWPPP KNLQYPSCL
Sbjct: 481 KAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHIPSFTIFSNWPPPKKNLQYPSCL 540

Query: 648 DFSPEGGYMAVGNAAGKVLLYKLHHYHHA 676
           DFSPEGGYMAVGNAAGKVLLYKLHHYHHA
Sbjct: 541 DFSPEGGYMAVGNAAGKVLLYKLHHYHHA 569

[Close]

BLAST of Clc02G13040 vs. ExPASy TrEMBL
Match: A0A6J1HWX2 (U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita maxima OX=3661 GN=LOC111466993 PE=4 SV=1)

HSP 1 Score: 1012.3 bits (2616), Expect = 9.5e-292
Identity = 522/570 (91.58%), Postives = 544/570 (95.44%), Query Frame = 0


Query: 108 MSLISQNVAVISSIEKDTGENTVAVSSLLRNIDASDVENSGLDTYSTKKRKKEHKKEDEH 167
           MSLISQNVAVISS E   G+NTV  SSLLR +DASDVENSG+DT  +KKRKKEHKKEDE 
Sbjct: 1   MSLISQNVAVISSTENVNGDNTVGSSSLLRKVDASDVENSGVDTTRSKKRKKEHKKEDEQ 60

Query: 168 LVKEQQKEMKKLENFLFGSLYSPVEFGKDEEQNGFSSEEKVPALYIMDRAANISLSAYED 227
           +VKEQQKEM+KLENFLFGSLYSPVEFGKDEE+N FS+EEK PALYIMDR+AN SLS YE+
Sbjct: 61  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNDFSAEEKAPALYIMDRSANNSLSVYEN 120

Query: 228 DFGLLDESANKEEPQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEDENSISGSEYVSRL 287
           D GLLDES++KEE QQRKPVWVDEEEEKA+VNITNVSRLRKLRKEEDE SISGSEYVSRL
Sbjct: 121 DVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 180

Query: 288 RAQHAKLNPGTEWAQLDAQSRDDS-DDDDLSSDDENAVALADGHDNVESIDDILRTSENL 347
           RAQHAKLNPGTEWAQLDAQSR  S DDDDLSSDDENAVALADG+DNV+SIDDILRT+ENL
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRSGSDDDDDLSSDDENAVALADGYDNVDSIDDILRTNENL 240

Query: 348 VVKSGAKLMPGLLGYSRLVDANVEEPSNGPINSVQFHRNAQLLLATGLDRKLRFFQIDGK 407
           V KSGAKL+PGLL YSRLVDAN +EPSNGPI+SVQFHRNAQLLLATGLDRKLRFFQIDGK
Sbjct: 241 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 300

Query: 408 RNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 467
           RNTKIQSIFLEDCPIRKASFLPDGSQVII+GRRKFFYSLDLVKAKVDKIGPLVGREEKSL
Sbjct: 301 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 360

Query: 468 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGSVRSLAFADDGQQLLSSGSDG 527
           EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNG+VRSLAFADDG+QLLSSG DG
Sbjct: 361 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG 420

Query: 528 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 587
           QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP
Sbjct: 421 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 480

Query: 588 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPP-KNLQYPSC 647
           LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPP KNLQYPSC
Sbjct: 481 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 540

Query: 648 LDFSPEGGYMAVGNAAGKVLLYKLHHYHHA 676
           LDFSPEGGYMAVGNAAGKVLLYKLHHY HA
Sbjct: 541 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 570

[Close]

BLAST of Clc02G13040 vs. ExPASy TrEMBL
Match: A0A6J1HKC7 (U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita moschata OX=3662 GN=LOC111463814 PE=4 SV=1)

HSP 1 Score: 1010.7 bits (2612), Expect = 2.8e-291
Identity = 523/570 (91.75%), Postives = 544/570 (95.44%), Query Frame = 0


Query: 108 MSLISQNVAVISSIEKDTGENTVAVSSLLRNIDASDVENSGLDTYSTKKRKKEHKKEDEH 167
           MSLISQNVAVISSIEK T +NTV  SS LR +DASDVENSG+DT   KKRKKEHKKEDE 
Sbjct: 1   MSLISQNVAVISSIEKVTEDNTVVSSSPLRKVDASDVENSGVDTTRAKKRKKEHKKEDEQ 60

Query: 168 LVKEQQKEMKKLENFLFGSLYSPVEFGKDEEQNGFSSEEKVPALYIMDRAANISLSAYED 227
           +VKEQQKEM+KLENFLFGSLYSPVEFGKDEE+NGFS+EEK  ALYIMDR+AN SLS YE+
Sbjct: 61  IVKEQQKEMEKLENFLFGSLYSPVEFGKDEEKNGFSAEEKDSALYIMDRSANNSLSVYEN 120

Query: 228 DFGLLDESANKEEPQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEDENSISGSEYVSRL 287
           D GLLDES+NKEE QQRKPVWVDEEEEKA+VNITNVSRLRKLRKEEDE SISGSEYVSRL
Sbjct: 121 DVGLLDESSNKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEEDEKSISGSEYVSRL 180

Query: 288 RAQHAKLNPGTEWAQLDAQSRDDS-DDDDLSSDDENAVALADGHDNVESIDDILRTSENL 347
           RAQHAKLNPGTEWAQLDAQSR  S DDDDL+SDDENAVALADG+DNV+SIDDILRT+ENL
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDNVDSIDDILRTNENL 240

Query: 348 VVKSGAKLMPGLLGYSRLVDANVEEPSNGPINSVQFHRNAQLLLATGLDRKLRFFQIDGK 407
           V KSGAKL+PGLL YSRLVDAN +EPSNGPI+SVQFHRNAQLLLATGLDRKLRFFQIDGK
Sbjct: 241 VAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLATGLDRKLRFFQIDGK 300

Query: 408 RNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 467
           RNTKIQSIFLEDCPIRKASFLPDGSQVII+GRRKFFYSLDLVKAKVDKIGPLVGREEKSL
Sbjct: 301 RNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKVDKIGPLVGREEKSL 360

Query: 468 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGSVRSLAFADDGQQLLSSGSDG 527
           EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNG+VRSLAFADDG+QLLSSG DG
Sbjct: 361 EVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDG 420

Query: 528 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 587
           QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP
Sbjct: 421 QVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKP 480

Query: 588 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPP-KNLQYPSC 647
           LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPP KNLQYPSC
Sbjct: 481 LKAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPPKKNLQYPSC 540

Query: 648 LDFSPEGGYMAVGNAAGKVLLYKLHHYHHA 676
           LDFSPEGGYMAVGNAAGKVLLYKLHHY HA
Sbjct: 541 LDFSPEGGYMAVGNAAGKVLLYKLHHYQHA 570

[Close]

BLAST of Clc02G13040 vs. ExPASy TrEMBL
Match: A0A5D3BMG2 (U3 small nucleolar RNA-associated protein 18-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00820 PE=4 SV=1)

HSP 1 Score: 996.5 bits (2575), Expect = 5.4e-287
Identity = 512/557 (91.92%), Postives = 531/557 (95.33%), Query Frame = 0


Query: 108 MSLISQNVAVISSIEKDTGENTVAVSSLLRNIDASDVENSGLDTYSTKKRKKEHKKEDEH 167
           MSLISQNVAVISSIEK T ENT+  SS LRN DAS+V+ SGLDT   KKRKKEH+KEDE 
Sbjct: 1   MSLISQNVAVISSIEKGTEENTLGPSSPLRNADASEVDKSGLDTSRAKKRKKEHRKEDEQ 60

Query: 168 LVKEQQKEMKKLENFLFGSLYSPVEFGKDEEQNGFSSEEKVPALYIMDRAANISLSAYED 227
           LV+EQQKEM KLENFLFGSLYSPVEFGKDEEQNGF+SEEK+PALYIMDR+A+ SLSAYED
Sbjct: 61  LVQEQQKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEKIPALYIMDRSADNSLSAYED 120

Query: 228 DFGLLDESANKEEPQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEDENSISGSEYVSRL 287
           D+ +LDES NKEE QQRKPVWVDEEEEKATVNITNVSRLRKLRKEEDENSISGS YVSRL
Sbjct: 121 DYRVLDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEDENSISGSVYVSRL 180

Query: 288 RAQHAKLNPGTEWAQLDAQSRDDSDDDDLSSDDENAVALADGHDNVESIDDILRTSENLV 347
           RAQHAKLNPGTEWAQLDAQSR DSDDDD+ SDDENAVALA G+DNV+SIDDILRTSENLV
Sbjct: 181 RAQHAKLNPGTEWAQLDAQSRGDSDDDDILSDDENAVALAGGYDNVDSIDDILRTSENLV 240

Query: 348 VKSGAKLMPGLLGYSRLVDANVEEPSNGPINSVQFHRNAQLLLATGLDRKLRFFQIDGKR 407
           VKSG KLMPGLLGYSRLVDAN EEPSNGPINSVQFHRN+QLLLATGLDRKLRFFQIDGKR
Sbjct: 241 VKSGGKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKR 300

Query: 408 NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE 467
           NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE
Sbjct: 301 NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE 360

Query: 468 VFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGSVRSLAFADDGQQLLSSGSDGQ 527
            FEVSPDSST+AFIGNEGYILLVS KTKELIGTLKMNGSVRSLAFADDG+QLLSSG DGQ
Sbjct: 361 AFEVSPDSSTIAFIGNEGYILLVSIKTKELIGTLKMNGSVRSLAFADDGRQLLSSGGDGQ 420

Query: 528 VYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPL 587
           +YHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPL
Sbjct: 421 IYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPL 480

Query: 588 KAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPP-KNLQYPSCL 647
           KAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIH+PSFTIFSNWPPP KNLQYPSCL
Sbjct: 481 KAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHIPSFTIFSNWPPPKKNLQYPSCL 540

Query: 648 DFSPEGGYMAVGNAAGK 664
           DFSPEGGYMAVGNAAGK
Sbjct: 541 DFSPEGGYMAVGNAAGK 557

[Close]

BLAST of Clc02G13040 vs. ExPASy TrEMBL
Match: A0A0A0LMJ5 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G279240 PE=4 SV=1)

HSP 1 Score: 992.6 bits (2565), Expect = 7.8e-286
Identity = 515/569 (90.51%), Postives = 537/569 (94.38%), Query Frame = 0


Query: 108 MSLISQNVAVISSIEKDTGENTVAVSSLLRNIDASDVENSGLDTYSTKKRKKEHKKEDEH 167
           MSLISQNVAV+SSIEK   ENT++ SS  RN DASDV+ SGLDT   KKRKKEHK ED+ 
Sbjct: 1   MSLISQNVAVVSSIEKVMEENTLSPSSPPRNADASDVDKSGLDTSRAKKRKKEHKIEDKQ 60

Query: 168 LVKEQQKEMKKLENFLFGSLYSPVEFGKDEEQNGFSSEEKVPALYIMDRAANISLSAYED 227
           LVKE QKEM KLENFLFGSLYSPVEFGKDEEQNGF+SEEK PALYIMDR+A+ SLSAYED
Sbjct: 61  LVKE-QKEMMKLENFLFGSLYSPVEFGKDEEQNGFNSEEKTPALYIMDRSADHSLSAYED 120

Query: 228 DFGLLDESANKEEPQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEDENSISGSEYVSRL 287
           D+GLLDES NKEE QQRKPVWVDEEEEKATVNITNVSRLRKLRKEE ENSISGSEYVSRL
Sbjct: 121 DYGLLDESTNKEEHQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEHENSISGSEYVSRL 180

Query: 288 RAQHAKLNPGTEWAQLDAQSRDDSDDDDLSSDDENAVALADGHDNVESIDDILRTSENLV 347
           RAQHAK+NPGTEWAQLDAQSR    DDDLSSDDENAVALA G+DNV+SIDDILRTSE LV
Sbjct: 181 RAQHAKINPGTEWAQLDAQSR---GDDDLSSDDENAVALAGGYDNVDSIDDILRTSEKLV 240

Query: 348 VKSGAKLMPGLLGYSRLVDANVEEPSNGPINSVQFHRNAQLLLATGLDRKLRFFQIDGKR 407
           VKSG KLMPGLLGYSRLVDAN EEPSNGPINSVQFHRN+QLLLATGLDRKLRFFQIDGKR
Sbjct: 241 VKSGGKLMPGLLGYSRLVDANAEEPSNGPINSVQFHRNSQLLLATGLDRKLRFFQIDGKR 300

Query: 408 NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE 467
           NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE
Sbjct: 301 NTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLE 360

Query: 468 VFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGSVRSLAFADDGQQLLSSGSDGQ 527
            FE+SPDSST+AF+GNEGYILLVSTKTKELIGTLKMNG+VRSLAFADDG+QLLSSG DGQ
Sbjct: 361 AFEISPDSSTIAFMGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADDGRQLLSSGGDGQ 420

Query: 528 VYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPL 587
           +YHWDLRTRTCIHKAVDEGCINGTALCTSPNG LFAAGS+SGIVNIYNRQEFLGGKKKPL
Sbjct: 421 IYHWDLRTRTCIHKAVDEGCINGTALCTSPNG-LFAAGSNSGIVNIYNRQEFLGGKKKPL 480

Query: 588 KAIENLTTKVDFLKFNHDAQILAICSRMKKSSLKLIHVPSFTIFSNWPPP-KNLQYPSCL 647
           KAIENLTTKVDFLKFNHDAQILAICSRMK+SSLKLIH+PSFTIFSNWPPP KNLQYPSCL
Sbjct: 481 KAIENLTTKVDFLKFNHDAQILAICSRMKQSSLKLIHIPSFTIFSNWPPPKKNLQYPSCL 540

Query: 648 DFSPEGGYMAVGNAAGKVLLYKLHHYHHA 676
           DFSPEGGYMAVGNAAGKVLLYKLHHYHHA
Sbjct: 541 DFSPEGGYMAVGNAAGKVLLYKLHHYHHA 564

[Close]

BLAST of Clc02G13040 vs. TAIR 10
Match: AT5G14050.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 663.7 bits (1711), Expect = 1.6e-190
Identity = 353/546 (64.65%), Postives = 424/546 (77.66%), Query Frame = 0


Query: 140 DASDVENSGLDTYSTKKRKKEHKKEDEHLVKEQQKEMKKLENFLFGSLYSPVEFGKDEEQ 199
           D  D E  G D   T+ ++++ +KE + L + +  EMKKLEN +FGSLYSPV FGK+EE+
Sbjct: 24  DVEDEEEIGSDDDLTRGKRRKTEKEKQKLEESELVEMKKLENLIFGSLYSPVTFGKEEEE 83

Query: 200 NGFSSEEKVPALYIMDRAANISLSAYEDDFGLLDESANKEEPQQ------RKPVWVDEEE 259
           +G        AL+ +DR+A   +  YEDD G  DE  + EE  Q       +  W DEEE
Sbjct: 84  DG-------SALFHVDRSAVRQIPDYEDD-GDDDEELSDEENGQVVAIRKGEAAWEDEEE 143

Query: 260 EKATVNITNVSRLRKLRKEEDENSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRD--DS 319
           ++  V+I +V+RLRKLRKEE+E  ISGSEY++RLRA HAKLNPGT+WA+ D+Q  D   S
Sbjct: 144 KQINVDIASVNRLRKLRKEENEGLISGSEYIARLRAHHAKLNPGTDWARPDSQIVDGESS 203

Query: 320 DDDDLSSDDENAVALADGHDNVESIDDILRTSENLVVKS-GAKLMPGLLGYSRLVDANVE 379
           DDDD            DG      +DDILRT+E+LVVKS G KL  G L YS+LVDAN  
Sbjct: 204 DDDDTQ----------DG-----GVDDILRTNEDLVVKSRGNKLCAGRLEYSKLVDANAA 263

Query: 380 EPSNGPINSVQFHRNAQLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDG 439
           +PSNGPINSV FH+NAQLLL  GLDR+LRFFQIDGKRNTKIQSIFLEDCPIRKA+FLP+G
Sbjct: 264 DPSNGPINSVHFHQNAQLLLTAGLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKAAFLPNG 323

Query: 440 SQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLV 499
           SQVI++GRRKFFYS DL KAK DKIGPLVGREEKSLE FEVS DS+T+AF+GNEGYILLV
Sbjct: 324 SQVIVSGRRKFFYSFDLEKAKFDKIGPLVGREEKSLEYFEVSQDSNTIAFVGNEGYILLV 383

Query: 500 STKTKELIGTLKMNGSVRSLAFADDGQQLLSSGSDGQVYHWDLRTRTCIHKAVDEGCING 559
           STKTKELIGTLKMNGSVRSLAF++DG+ LLSSG DGQVY WDLRT  C++K VDEG   G
Sbjct: 384 STKTKELIGTLKMNGSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCG 443

Query: 560 TALCTSPNGALFAAGSDSGIVNIYNRQEFLGGKKKPLKAIENLTTKVDFLKFNHDAQILA 619
           T+LC+S NGALFA+G+D GIVNIY + EF+GGK+KP+K ++NLT+K+DF+KFNHDAQILA
Sbjct: 444 TSLCSSLNGALFASGTDRGIVNIYKKSEFVGGKRKPIKTVDNLTSKIDFMKFNHDAQILA 503

Query: 620 ICSRMKKSSLKLIHVPSFTIFSNWPPPKN-LQYPSCLDFSPEGGYMAVGNAAGKVLLYKL 676
           I S M K+S+KL+HVPS T+FSNWPPP + + YP CLDFSP  G+MA+GNAAGKVLLYKL
Sbjct: 504 IVSTMNKNSVKLVHVPSLTVFSNWPPPNSTMHYPRCLDFSPGSGFMAMGNAAGKVLLYKL 546

[Close]

BLAST of Clc02G13040 vs. TAIR 10
Match: AT1G15440.1 (periodic tryptophan protein 2 )

HSP 1 Score: 45.8 bits (107), Expect = 1.6e-04
Identity = 44/194 (22.68%), Postives = 77/194 (39.69%), Query Frame = 0


Query: 377 INSVQFHRNAQLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIIA 436
           + ++ F  +   LL+  LD  +R +     +N K    +    P +  S   D S  ++ 
Sbjct: 434 VTALHFMADNHSLLSASLDGTVRAWDFKRYKNYK---TYTTPTPRQFVSLTADPSGDVVC 493

Query: 437 GRRKFFYSLDLVKAKVDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVST-KTK 496
                 + + +   K  +I  ++   E  +     SP +  +A    +  + L     +K
Sbjct: 494 AGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASK 553

Query: 497 ELIGTLKMNGSVRSLAFADDGQQLLSSGSDGQVYHWDLRTRTCIHKAVDEGCINGTALCT 556
             + T + N  V ++AF  DG+QL SS  DGQ+  WD      ++       I G  + T
Sbjct: 554 GTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEGRRDIAGGRVMT 613

Query: 557 SPNGALFAAGSDSG 570
                  AA S SG
Sbjct: 614 DRRS---AANSSSG 621

[Close]

BLAST of Clc02G13040 vs. TAIR 10
Match: AT1G15440.2 (periodic tryptophan protein 2 )

HSP 1 Score: 45.8 bits (107), Expect = 1.6e-04
Identity = 44/194 (22.68%), Postives = 77/194 (39.69%), Query Frame = 0


Query: 377 INSVQFHRNAQLLLATGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIIA 436
           + ++ F  +   LL+  LD  +R +     +N K    +    P +  S   D S  ++ 
Sbjct: 394 VTALHFMADNHSLLSASLDGTVRAWDFKRYKNYK---TYTTPTPRQFVSLTADPSGDVVC 453

Query: 437 GRRKFFYSLDLVKAKVDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVST-KTK 496
                 + + +   K  +I  ++   E  +     SP +  +A    +  + L     +K
Sbjct: 454 AGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASK 513

Query: 497 ELIGTLKMNGSVRSLAFADDGQQLLSSGSDGQVYHWDLRTRTCIHKAVDEGCINGTALCT 556
             + T + N  V ++AF  DG+QL SS  DGQ+  WD      ++       I G  + T
Sbjct: 514 GTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEGRRDIAGGRVMT 573

Query: 557 SPNGALFAAGSDSG 570
                  AA S SG
Sbjct: 574 DRRS---AANSSSG 581

The following BLAST results are available for this feature:

BLAST of Clc02G13040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901788.1	3.7e-298	94.73	U3 small nucleolar RNA-associated protein 18 homolog [Benincasa hispida] >XP_038...	[more]
XP_008457746.1	1.9e-294	92.09	PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog [Cucumis melo]	[more]
XP_038888553.1	1.6e-293	91.92	U3 small nucleolar RNA-associated protein 18 homolog isoform X1 [Benincasa hispi...	[more]
XP_023511721.1	5.1e-292	91.93	U3 small nucleolar RNA-associated protein 18 homolog [Cucurbita pepo subsp. pepo...	[more]
KAG7011246.1	6.7e-292	88.98	U3 small nucleolar RNA-associated protein 18-like protein, partial [Cucurbita ar...	[more]

BLAST of Clc02G13040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMU5	2.2e-189	64.65	U3 small nucleolar RNA-associated protein 18 homolog OS=Arabidopsis thaliana OX=...	[more]
Q9Y5J1	5.0e-80	39.29	U3 small nucleolar RNA-associated protein 18 homolog OS=Homo sapiens OX=9606 GN=...	[more]
Q5SSI6	2.5e-79	37.05	U3 small nucleolar RNA-associated protein 18 homolog OS=Mus musculus OX=10090 GN...	[more]
P78750	2.2e-72	32.77	Probable U3 small nucleolar RNA-associated protein 18 OS=Schizosaccharomyces pom...	[more]
P40362	9.4e-55	31.96	U3 small nucleolar RNA-associated protein 18 OS=Saccharomyces cerevisiae (strain...	[more]

BLAST of Clc02G13040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C7I9	9.1e-295	92.09	U3 small nucleolar RNA-associated protein 18 homolog OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1HWX2	9.5e-292	91.58	U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita maxima OX=3661...	[more]
A0A6J1HKC7	2.8e-291	91.75	U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita moschata OX=36...	[more]
A0A5D3BMG2	5.4e-287	91.92	U3 small nucleolar RNA-associated protein 18-like protein OS=Cucumis melo var. m...	[more]
A0A0A0LMJ5	7.8e-286	90.51	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G...	[more]

BLAST of Clc02G13040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14050.1	1.6e-190	64.65	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G15440.1	1.6e-04	22.68	periodic tryptophan protein 2	[more]
AT1G15440.2	1.6e-04	22.68	periodic tryptophan protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 162..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 295..320
None	No IPR available	PANTHER	PTHR18359	WD-REPEAT PROTEIN-RELATED	coord: 154..674
None	No IPR available	PANTHER	PTHR18359:SF0	U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 18 HOMOLOG	coord: 154..674
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 500..535 score: 9.335602
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 535..575 e-value: 1.7 score: 15.5 coord: 633..668 e-value: 5.1 score: 12.5 coord: 362..402 e-value: 1.9 score: 15.2 coord: 494..532 e-value: 8.0E-7 score: 38.7
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 498..532 e-value: 0.0027 score: 18.5 coord: 548..575 e-value: 0.038 score: 14.9
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 500..541 score: 11.978851
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 352..670 e-value: 4.9E-105 score: 353.5
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 372..669

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G13040.2	Clc02G13040.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0034388	Pwp2p-containing subcomplex of 90S preribosome
cellular_component	GO:0032040	small-subunit processome
molecular_function	GO:0005515	protein binding