Clc02G12940 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G12940
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	ethylene-responsive transcription factor ERF008
Location	ClcChr02: 24860319 .. 24860783 (+)
RNA-Seq Expression	Clc02G12940
Synteny	Clc02G12940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGAGAAAAATGAAGAGAGAAAATTAAAGCAATTCAAAGGGATAAGGATGAGAAAATGGGGAAAATGGGTTGCCGAAATCCGAGAGCCTAATAAACGCTCTCGAATTTGGCTCGGTTCTTATTCCTCTCCCGTCGCCGCCGCCCGTGCCTACGACGCCGCCGTCTTCCACCTCCGTGGCCCCACCGCCCGCCTTAATTTTCCTGACTTTTTCACCACCGTTGACCGCTCCTTCCCTCTCTCCGCCGCTGCCGTCCGCAAGATCGCCGCCGAGGTCGGCGCCCATGTCGACGCCCTCGAGTCGTCTCTCCGACATCACTTCGTCAATTCCTCCGACCAAAGTCCCAACCCCACGAAGCTTCGTTCTTCTTCAAGTGGGTTTTCCGATCGGGTCGACTTGAATAAATTTCCTGACCCGGAAGACGCCGATGGCGACTGCGCTAGCACTCATTGGACAAGCTGA

mRNA sequence

ATGAAAGAGAAAAATGAAGAGAGAAAATTAAAGCAATTCAAAGGGATAAGGATGAGAAAATGGGGAAAATGGGTTGCCGAAATCCGAGAGCCTAATAAACGCTCTCGAATTTGGCTCGGTTCTTATTCCTCTCCCGTCGCCGCCGCCCGTGCCTACGACGCCGCCGTCTTCCACCTCCGTGGCCCCACCGCCCGCCTTAATTTTCCTGACTTTTTCACCACCGTTGACCGCTCCTTCCCTCTCTCCGCCGCTGCCGTCCGCAAGATCGCCGCCGAGGTCGGCGCCCATGTCGACGCCCTCGAGTCGTCTCTCCGACATCACTTCGTCAATTCCTCCGACCAAAGTCCCAACCCCACGAAGCTTCGTTCTTCTTCAAGTGGGTTTTCCGATCGGGTCGACTTGAATAAATTTCCTGACCCGGAAGACGCCGATGGCGACTGCGCTAGCACTCATTGGACAAGCTGA

Coding sequence (CDS)

ATGAAAGAGAAAAATGAAGAGAGAAAATTAAAGCAATTCAAAGGGATAAGGATGAGAAAATGGGGAAAATGGGTTGCCGAAATCCGAGAGCCTAATAAACGCTCTCGAATTTGGCTCGGTTCTTATTCCTCTCCCGTCGCCGCCGCCCGTGCCTACGACGCCGCCGTCTTCCACCTCCGTGGCCCCACCGCCCGCCTTAATTTTCCTGACTTTTTCACCACCGTTGACCGCTCCTTCCCTCTCTCCGCCGCTGCCGTCCGCAAGATCGCCGCCGAGGTCGGCGCCCATGTCGACGCCCTCGAGTCGTCTCTCCGACATCACTTCGTCAATTCCTCCGACCAAAGTCCCAACCCCACGAAGCTTCGTTCTTCTTCAAGTGGGTTTTCCGATCGGGTCGACTTGAATAAATTTCCTGACCCGGAAGACGCCGATGGCGACTGCGCTAGCACTCATTGGACAAGCTGA

Protein sequence

MKEKNEERKLKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLRGPTARLNFPDFFTTVDRSFPLSAAAVRKIAAEVGAHVDALESSLRHHFVNSSDQSPNPTKLRSSSSGFSDRVDLNKFPDPEDADGDCASTHWTS

Homology

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BLAST of Clc02G12940 vs. NCBI nr
Match: XP_038900860.1 (ethylene-responsive transcription factor ERF008-like [Benincasa hispida] >XP_038900861.1 ethylene-responsive transcription factor ERF008-like [Benincasa hispida])

HSP 1 Score: 258.1 bits (658), Expect = 4.9e-65
Identity = 137/156 (87.82%), Postives = 146/156 (93.59%), Query Frame = 0


Query: 1   MKEKNE-ERKLKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHL 60
           MKEKNE ++KLKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHL
Sbjct: 1   MKEKNEDQKKLKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHL 60

Query: 61  RGPTARLNFPDFFTTVDRSFPLSAAAVRKIAAEVGAHVDALESSLRHHFVNSSDQSPNPT 120
           RGP+ARLNFPDFF+TVDRSFPLSAAAVRKIAAEVGA VDALESSLRHH  +SSD++   T
Sbjct: 61  RGPSARLNFPDFFSTVDRSFPLSAAAVRKIAAEVGARVDALESSLRHHSAHSSDRT---T 120

Query: 121 KLR-SSSSGFSDRVDLNKFPDPEDADGDCASTHWTS 155
           KLR SSSSGFSDRVDLNKFPDPED+DGDCA+T  TS
Sbjct: 121 KLRSSSSSGFSDRVDLNKFPDPEDSDGDCATTPCTS 153

[Close]

BLAST of Clc02G12940 vs. NCBI nr
Match: XP_004149688.1 (ethylene-responsive transcription factor ERF011 [Cucumis sativus] >KGN61989.1 hypothetical protein Csa_006520 [Cucumis sativus])

HSP 1 Score: 249.2 bits (635), Expect = 2.3e-62
Identity = 138/163 (84.66%), Postives = 142/163 (87.12%), Query Frame = 0


Query: 1   MKEKNEERKLKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLR 60
           MK++ EE+K KQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLR
Sbjct: 1   MKDRKEEKKSKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLR 60

Query: 61  GPTARLNFPDFF-TTVDR--SFPLSAAAVRKIAAEVGAHVDALESSLRHHFVNSSDQ--S 120
           GPTARLNFPDF  TTVDR  SFPLSAAAVRKIAAEVGA VDALESS RH    SSDQ  S
Sbjct: 61  GPTARLNFPDFLTTTVDRASSFPLSAAAVRKIAAEVGAQVDALESSRRH----SSDQSCS 120

Query: 121 PNPTKLR----SSSSGFSDRVDLNKFPDPEDADGDCASTHWTS 155
            NPTKLR    S SSGFSDRVDLNKFPDPED+DGDC STHWTS
Sbjct: 121 LNPTKLRCCSYSCSSGFSDRVDLNKFPDPEDSDGDCVSTHWTS 159

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BLAST of Clc02G12940 vs. NCBI nr
Match: XP_008457742.1 (PREDICTED: ethylene-responsive transcription factor ERF008 [Cucumis melo] >KAA0045766.1 ethylene-responsive transcription factor ERF008 [Cucumis melo var. makuwa] >TYK08477.1 ethylene-responsive transcription factor ERF008 [Cucumis melo var. makuwa])

HSP 1 Score: 248.8 bits (634), Expect = 3.0e-62
Identity = 136/159 (85.53%), Postives = 138/159 (86.79%), Query Frame = 0


Query: 1   MKEKNEERKLKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLR 60
           MK+K EERK KQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLR
Sbjct: 1   MKDKKEERKSKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLR 60

Query: 61  GPTARLNFPDFF-TTVDR-SFPLSAAAVRKIAAEVGAHVDALESSLRHHFVNSSDQSPNP 120
           GPTARLNFPDF  TTVDR SFPLSAAAVRKIAAEVGA VDALESS   H    S  S NP
Sbjct: 61  GPTARLNFPDFLTTTVDRGSFPLSAAAVRKIAAEVGAQVDALESSSLPHSSVQSCCSLNP 120

Query: 121 TKLR---SSSSGFSDRVDLNKFPDPEDADGDCASTHWTS 155
           TKLR   S SSGFSDRVDLNKFPDPED+DGDC STHWTS
Sbjct: 121 TKLRCCSSCSSGFSDRVDLNKFPDPEDSDGDCVSTHWTS 159

[Close]

BLAST of Clc02G12940 vs. NCBI nr
Match: XP_022947660.1 (ethylene-responsive transcription factor ERF011-like [Cucurbita moschata])

HSP 1 Score: 226.5 bits (576), Expect = 1.6e-55
Identity = 125/172 (72.67%), Postives = 134/172 (77.91%), Query Frame = 0


Query: 2   KEKNEERKLKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLRG 61
           +E+      K +KGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYD AVFHLRG
Sbjct: 6   EERRNRENTKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTAVFHLRG 65

Query: 62  PTARLNFPDFFTT--VDRSFPL----SAAAVRKIAAEVGAHVDALESSLRHHFVN--SSD 121
           P+ARLNFPDFFTT   DR FPL    SA+ VRKIAAEVGA VDALESSLRHHF N  ++D
Sbjct: 66  PSARLNFPDFFTTAAADRPFPLPADISASTVRKIAAEVGARVDALESSLRHHFHNCRTAD 125

Query: 122 Q-----SPN--------PTKLRSSSSGFSDRVDLNKFPDPEDADGDCASTHW 153
           Q     SP+        PTKLRS S GFSDRVDLNK PDPED+DGDCAST W
Sbjct: 126 QIHQTPSPSPATTTTTTPTKLRSDSGGFSDRVDLNKLPDPEDSDGDCASTPW 177

[Close]

BLAST of Clc02G12940 vs. NCBI nr
Match: KAG6605215.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035189.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 226.5 bits (576), Expect = 1.6e-55
Identity = 125/172 (72.67%), Postives = 134/172 (77.91%), Query Frame = 0


Query: 2   KEKNEERKLKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLRG 61
           +E+      K +KGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYD AVFHLRG
Sbjct: 6   EERRNRENTKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTAVFHLRG 65

Query: 62  PTARLNFPDFFTT--VDRSFPL----SAAAVRKIAAEVGAHVDALESSLRHHFVN--SSD 121
           P+ARLNFPDFFTT   DR FPL    SA+ VRKIAAEVGA VDALESSLRHHF N  ++D
Sbjct: 66  PSARLNFPDFFTTAAADRPFPLPADISASTVRKIAAEVGARVDALESSLRHHFHNCRTAD 125

Query: 122 Q-----SPN--------PTKLRSSSSGFSDRVDLNKFPDPEDADGDCASTHW 153
           Q     SP+        PTKLRS S GFSDRVDLNK PDPED+DGDCAST W
Sbjct: 126 QTHQTPSPSPATTTTTTPTKLRSDSGGFSDRVDLNKLPDPEDSDGDCASTPW 177

[Close]

BLAST of Clc02G12940 vs. ExPASy Swiss-Prot
Match: O22174 (Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 GN=ERF008 PE=2 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 4.5e-37
Identity = 87/150 (58.00%), Postives = 107/150 (71.33%), Query Frame = 0


Query: 7   ERKLKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLRGPTARL 66
           +R LK +KGIRMRKWGKWVAEIREPNKRSRIWLGSY++P AAARAYD AVF+LRGP+ARL
Sbjct: 22  KRDLKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLRGPSARL 81

Query: 67  NFPDFFTTV------DRSFPLSAAAVRKIAAEVGAHVDALESSLRHHFVNSSDQSPNP-- 126
           NFP+    +       R   LSAA +R+ AAEVGA VDAL +++    VN+  ++     
Sbjct: 82  NFPELLAGLTVSNGGGRGGDLSAAYIRRKAAEVGAQVDALGATV---VVNTGGENRGDYE 141

Query: 127 --TKLRSSSSGFSDRVDLNKFPDPEDADGD 147
                R S +G  +RVDLNK PDPE++DGD
Sbjct: 142 KIENCRKSGNGSLERVDLNKLPDPENSDGD 168

[Close]

BLAST of Clc02G12940 vs. ExPASy Swiss-Prot
Match: Q9SW63 (Ethylene-responsive transcription factor RAP2-10 OS=Arabidopsis thaliana OX=3702 GN=RAP2-10 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.7e-34
Identity = 90/169 (53.25%), Postives = 105/169 (62.13%), Query Frame = 0


Query: 11  KQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLRGPTARLNFPD 70
           K +KGIRMRKWGKWVAEIREPNKRSRIWLGSYS+P AAARAYD AVF+LRGP+ARLNFP+
Sbjct: 28  KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPEAAARAYDTAVFYLRGPSARLNFPE 87

Query: 71  FFT----------TVDRSFPLSAAAVRKIAAEVGAHVDALESS----LRHH--------- 130
                         V+    +SAA +R+ AAEVGA VDALE++     RHH         
Sbjct: 88  LLAGVTVTGGGGGGVNGGGDMSAAYIRRKAAEVGAQVDALEAAGAGGNRHHHHHQHQRGN 147

Query: 131 ---FVNSSDQSPNPTKLRSSS-------SGFSDRVDLNKFPDPEDADGD 147
                N SD   N   +  SS       +G  +RVDLNK PDPE +D D
Sbjct: 148 HDYVDNHSDYRINDDLMECSSKEGFKRCNGSLERVDLNKLPDPETSDDD 196

[Close]

BLAST of Clc02G12940 vs. ExPASy Swiss-Prot
Match: Q9SNE1 (Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana OX=3702 GN=ERF011 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 8.0e-34
Identity = 78/139 (56.12%), Postives = 98/139 (70.50%), Query Frame = 0


Query: 8   RKLKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLRGPTARLN 67
           ++ + FKGIRMRKWGKWVAEIREPNKRSR+WLGSYS+P AAARAYD AVF+LRGPTA LN
Sbjct: 16  KRERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLN 75

Query: 68  FPDFFTTVDRSFPLSAAAVRKIAAEVGAHVDALESSLRHHFVNSSDQSPNPTKLRSSSSG 127
           FP+          +SAA +RK A EVGA VDA+ +++    V ++ +    ++ R    G
Sbjct: 76  FPELLPCTSAE-DMSAATIRKKATEVGAQVDAIGATV----VQNNKRRRVFSQKRDFGGG 135

Query: 128 FSDRVDLNKFPDPEDADGD 147
             + VDLNK PDPE+ D D
Sbjct: 136 LLELVDLNKLPDPENLDDD 149

[Close]

BLAST of Clc02G12940 vs. ExPASy Swiss-Prot
Match: Q9FH94 (Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana OX=3702 GN=ERF010 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.0e-33
Identity = 84/166 (50.60%), Postives = 100/166 (60.24%), Query Frame = 0


Query: 11  KQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLRGPTARLNFPD 70
           + +KGIRMRKWGKWVAEIREPNKRSR+WLGSYS+P AAARAYD AVF+LRGPTARLNFP+
Sbjct: 19  RPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTARLNFPE 78

Query: 71  FFTTVDRS-FPLSAAAVRKIAAEVGAHVDALESSL---RHHFVNSS-------------- 130
                  S   +SAA +RK A EVGA VDAL +++   RH     +              
Sbjct: 79  LLPGEKFSDEDMSAATIRKKATEVGAQVDALGTAVQNNRHRVFGQNRDSDVDNKNFHRNY 138

Query: 131 -------DQSPNPTKLRSSSSGFSDRVDLNKFPDPEDADGDCASTH 152
                  ++     K   S     DRVDLNK PDPE +D +  S H
Sbjct: 139 QNGEREEEEEDEDDKRLRSGGRLLDRVDLNKLPDPESSDEEWESKH 184

[Close]

BLAST of Clc02G12940 vs. ExPASy Swiss-Prot
Match: Q8LC30 (Ethylene-responsive transcription factor RAP2-1 OS=Arabidopsis thaliana OX=3702 GN=RAP2-1 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.5e-27
Identity = 72/142 (50.70%), Postives = 88/142 (61.97%), Query Frame = 0


Query: 11  KQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLRGPTARLNFPD 70
           K ++GIR RKWGKWVAEIREPNKRSR+WLGSY++ +AAARAYD AVF+LRGP+ARLNFPD
Sbjct: 29  KPYRGIRRRKWGKWVAEIREPNKRSRLWLGSYTTDIAAARAYDVAVFYLRGPSARLNFPD 88

Query: 71  FF----------TTVDRSFPLSAAAVRKIAAEVGAHVDALESSLRHHFVNSSDQSPNPTK 130
                       TT D    + AA +R+ AAEVGA VDAL +S      +S+     P  
Sbjct: 89  LLLQEEDHLSAATTAD----MPAALIREKAAEVGARVDALLASAAPSMAHSTPPVIKP-- 148

Query: 131 LRSSSSGFSDRVDLNKFPDPED 143
                       DLN+ P+  D
Sbjct: 149 ------------DLNQIPESGD 152

[Close]

BLAST of Clc02G12940 vs. ExPASy TrEMBL
Match: A0A0A0LLV5 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G279260 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.1e-62
Identity = 138/163 (84.66%), Postives = 142/163 (87.12%), Query Frame = 0


Query: 1   MKEKNEERKLKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLR 60
           MK++ EE+K KQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLR
Sbjct: 1   MKDRKEEKKSKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLR 60

Query: 61  GPTARLNFPDFF-TTVDR--SFPLSAAAVRKIAAEVGAHVDALESSLRHHFVNSSDQ--S 120
           GPTARLNFPDF  TTVDR  SFPLSAAAVRKIAAEVGA VDALESS RH    SSDQ  S
Sbjct: 61  GPTARLNFPDFLTTTVDRASSFPLSAAAVRKIAAEVGAQVDALESSRRH----SSDQSCS 120

Query: 121 PNPTKLR----SSSSGFSDRVDLNKFPDPEDADGDCASTHWTS 155
            NPTKLR    S SSGFSDRVDLNKFPDPED+DGDC STHWTS
Sbjct: 121 LNPTKLRCCSYSCSSGFSDRVDLNKFPDPEDSDGDCVSTHWTS 159

[Close]

BLAST of Clc02G12940 vs. ExPASy TrEMBL
Match: A0A5D3C946 (Ethylene-responsive transcription factor ERF008 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold30323G00010 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.4e-62
Identity = 136/159 (85.53%), Postives = 138/159 (86.79%), Query Frame = 0


Query: 1   MKEKNEERKLKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLR 60
           MK+K EERK KQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLR
Sbjct: 1   MKDKKEERKSKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLR 60

Query: 61  GPTARLNFPDFF-TTVDR-SFPLSAAAVRKIAAEVGAHVDALESSLRHHFVNSSDQSPNP 120
           GPTARLNFPDF  TTVDR SFPLSAAAVRKIAAEVGA VDALESS   H    S  S NP
Sbjct: 61  GPTARLNFPDFLTTTVDRGSFPLSAAAVRKIAAEVGAQVDALESSSLPHSSVQSCCSLNP 120

Query: 121 TKLR---SSSSGFSDRVDLNKFPDPEDADGDCASTHWTS 155
           TKLR   S SSGFSDRVDLNKFPDPED+DGDC STHWTS
Sbjct: 121 TKLRCCSSCSSGFSDRVDLNKFPDPEDSDGDCVSTHWTS 159

[Close]

BLAST of Clc02G12940 vs. ExPASy TrEMBL
Match: A0A1S3C5T2 (ethylene-responsive transcription factor ERF008 OS=Cucumis melo OX=3656 GN=LOC103497364 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.4e-62
Identity = 136/159 (85.53%), Postives = 138/159 (86.79%), Query Frame = 0


Query: 1   MKEKNEERKLKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLR 60
           MK+K EERK KQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLR
Sbjct: 1   MKDKKEERKSKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLR 60

Query: 61  GPTARLNFPDFF-TTVDR-SFPLSAAAVRKIAAEVGAHVDALESSLRHHFVNSSDQSPNP 120
           GPTARLNFPDF  TTVDR SFPLSAAAVRKIAAEVGA VDALESS   H    S  S NP
Sbjct: 61  GPTARLNFPDFLTTTVDRGSFPLSAAAVRKIAAEVGAQVDALESSSLPHSSVQSCCSLNP 120

Query: 121 TKLR---SSSSGFSDRVDLNKFPDPEDADGDCASTHWTS 155
           TKLR   S SSGFSDRVDLNKFPDPED+DGDC STHWTS
Sbjct: 121 TKLRCCSSCSSGFSDRVDLNKFPDPEDSDGDCVSTHWTS 159

[Close]

BLAST of Clc02G12940 vs. ExPASy TrEMBL
Match: A0A6J1G7I9 (ethylene-responsive transcription factor ERF011-like OS=Cucurbita moschata OX=3662 GN=LOC111451457 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 7.7e-56
Identity = 125/172 (72.67%), Postives = 134/172 (77.91%), Query Frame = 0


Query: 2   KEKNEERKLKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLRG 61
           +E+      K +KGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYD AVFHLRG
Sbjct: 6   EERRNRENTKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTAVFHLRG 65

Query: 62  PTARLNFPDFFTT--VDRSFPL----SAAAVRKIAAEVGAHVDALESSLRHHFVN--SSD 121
           P+ARLNFPDFFTT   DR FPL    SA+ VRKIAAEVGA VDALESSLRHHF N  ++D
Sbjct: 66  PSARLNFPDFFTTAAADRPFPLPADISASTVRKIAAEVGARVDALESSLRHHFHNCRTAD 125

Query: 122 Q-----SPN--------PTKLRSSSSGFSDRVDLNKFPDPEDADGDCASTHW 153
           Q     SP+        PTKLRS S GFSDRVDLNK PDPED+DGDCAST W
Sbjct: 126 QIHQTPSPSPATTTTTTPTKLRSDSGGFSDRVDLNKLPDPEDSDGDCASTPW 177

[Close]

BLAST of Clc02G12940 vs. ExPASy TrEMBL
Match: A0A6J1L6F3 (ethylene-responsive transcription factor ERF011-like OS=Cucurbita maxima OX=3661 GN=LOC111499605 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.8e-55
Identity = 121/171 (70.76%), Postives = 131/171 (76.61%), Query Frame = 0


Query: 2   KEKNEERKLKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLRG 61
           +E+      K +KGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYD AVFHLRG
Sbjct: 6   EERRNRENTKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTAVFHLRG 65

Query: 62  PTARLNFPDFFT---TVDRSFP----LSAAAVRKIAAEVGAHVDALESSLRHHFVN---- 121
           P+ARLNFPDFFT     DR FP    +SA+ VRKIAAEVGA VDALESSLRHHF N    
Sbjct: 66  PSARLNFPDFFTAAAATDRPFPFPADISASTVRKIAAEVGARVDALESSLRHHFHNCRTA 125

Query: 122 -SSDQSPN--------PTKLRSSSSGFSDRVDLNKFPDPEDADGDCASTHW 153
             + Q+P+        PTKLRS S GFSDRVDLNK PDPED+DGDCAST W
Sbjct: 126 DQTHQTPSLSPTTTTTPTKLRSDSGGFSDRVDLNKLPDPEDSDGDCASTPW 176

[Close]

BLAST of Clc02G12940 vs. TAIR 10
Match: AT2G23340.1 (DREB and EAR motif protein 3 )

HSP 1 Score: 155.6 bits (392), Expect = 3.2e-38
Identity = 87/150 (58.00%), Postives = 107/150 (71.33%), Query Frame = 0


Query: 7   ERKLKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLRGPTARL 66
           +R LK +KGIRMRKWGKWVAEIREPNKRSRIWLGSY++P AAARAYD AVF+LRGP+ARL
Sbjct: 22  KRDLKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLRGPSARL 81

Query: 67  NFPDFFTTV------DRSFPLSAAAVRKIAAEVGAHVDALESSLRHHFVNSSDQSPNP-- 126
           NFP+    +       R   LSAA +R+ AAEVGA VDAL +++    VN+  ++     
Sbjct: 82  NFPELLAGLTVSNGGGRGGDLSAAYIRRKAAEVGAQVDALGATV---VVNTGGENRGDYE 141

Query: 127 --TKLRSSSSGFSDRVDLNKFPDPEDADGD 147
                R S +G  +RVDLNK PDPE++DGD
Sbjct: 142 KIENCRKSGNGSLERVDLNKLPDPENSDGD 168

[Close]

BLAST of Clc02G12940 vs. TAIR 10
Match: AT4G36900.1 (related to AP2 10 )

HSP 1 Score: 146.4 bits (368), Expect = 1.9e-35
Identity = 90/169 (53.25%), Postives = 105/169 (62.13%), Query Frame = 0


Query: 11  KQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLRGPTARLNFPD 70
           K +KGIRMRKWGKWVAEIREPNKRSRIWLGSYS+P AAARAYD AVF+LRGP+ARLNFP+
Sbjct: 28  KPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPEAAARAYDTAVFYLRGPSARLNFPE 87

Query: 71  FFT----------TVDRSFPLSAAAVRKIAAEVGAHVDALESS----LRHH--------- 130
                         V+    +SAA +R+ AAEVGA VDALE++     RHH         
Sbjct: 88  LLAGVTVTGGGGGGVNGGGDMSAAYIRRKAAEVGAQVDALEAAGAGGNRHHHHHQHQRGN 147

Query: 131 ---FVNSSDQSPNPTKLRSSS-------SGFSDRVDLNKFPDPEDADGD 147
                N SD   N   +  SS       +G  +RVDLNK PDPE +D D
Sbjct: 148 HDYVDNHSDYRINDDLMECSSKEGFKRCNGSLERVDLNKLPDPETSDDD 196

[Close]

BLAST of Clc02G12940 vs. TAIR 10
Match: AT3G50260.1 (cooperatively regulated by ethylene and jasmonate 1 )

HSP 1 Score: 144.8 bits (364), Expect = 5.7e-35
Identity = 78/139 (56.12%), Postives = 98/139 (70.50%), Query Frame = 0


Query: 8   RKLKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLRGPTARLN 67
           ++ + FKGIRMRKWGKWVAEIREPNKRSR+WLGSYS+P AAARAYD AVF+LRGPTA LN
Sbjct: 16  KRERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLN 75

Query: 68  FPDFFTTVDRSFPLSAAAVRKIAAEVGAHVDALESSLRHHFVNSSDQSPNPTKLRSSSSG 127
           FP+          +SAA +RK A EVGA VDA+ +++    V ++ +    ++ R    G
Sbjct: 76  FPELLPCTSAE-DMSAATIRKKATEVGAQVDAIGATV----VQNNKRRRVFSQKRDFGGG 135

Query: 128 FSDRVDLNKFPDPEDADGD 147
             + VDLNK PDPE+ D D
Sbjct: 136 LLELVDLNKLPDPENLDDD 149

[Close]

BLAST of Clc02G12940 vs. TAIR 10
Match: AT5G67190.1 (DREB and EAR motif protein 2 )

HSP 1 Score: 142.9 bits (359), Expect = 2.2e-34
Identity = 84/166 (50.60%), Postives = 100/166 (60.24%), Query Frame = 0


Query: 11  KQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLRGPTARLNFPD 70
           + +KGIRMRKWGKWVAEIREPNKRSR+WLGSYS+P AAARAYD AVF+LRGPTARLNFP+
Sbjct: 19  RPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTARLNFPE 78

Query: 71  FFTTVDRS-FPLSAAAVRKIAAEVGAHVDALESSL---RHHFVNSS-------------- 130
                  S   +SAA +RK A EVGA VDAL +++   RH     +              
Sbjct: 79  LLPGEKFSDEDMSAATIRKKATEVGAQVDALGTAVQNNRHRVFGQNRDSDVDNKNFHRNY 138

Query: 131 -------DQSPNPTKLRSSSSGFSDRVDLNKFPDPEDADGDCASTH 152
                  ++     K   S     DRVDLNK PDPE +D +  S H
Sbjct: 139 QNGEREEEEEDEDDKRLRSGGRLLDRVDLNKLPDPESSDEEWESKH 184

[Close]

BLAST of Clc02G12940 vs. TAIR 10
Match: AT1G46768.1 (related to AP2 1 )

HSP 1 Score: 123.2 bits (308), Expect = 1.8e-28
Identity = 72/142 (50.70%), Postives = 88/142 (61.97%), Query Frame = 0


Query: 11  KQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLRGPTARLNFPD 70
           K ++GIR RKWGKWVAEIREPNKRSR+WLGSY++ +AAARAYD AVF+LRGP+ARLNFPD
Sbjct: 29  KPYRGIRRRKWGKWVAEIREPNKRSRLWLGSYTTDIAAARAYDVAVFYLRGPSARLNFPD 88

Query: 71  FF----------TTVDRSFPLSAAAVRKIAAEVGAHVDALESSLRHHFVNSSDQSPNPTK 130
                       TT D    + AA +R+ AAEVGA VDAL +S      +S+     P  
Sbjct: 89  LLLQEEDHLSAATTAD----MPAALIREKAAEVGARVDALLASAAPSMAHSTPPVIKP-- 148

Query: 131 LRSSSSGFSDRVDLNKFPDPED 143
                       DLN+ P+  D
Sbjct: 149 ------------DLNQIPESGD 152

The following BLAST results are available for this feature:

BLAST of Clc02G12940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900860.1	4.9e-65	87.82	ethylene-responsive transcription factor ERF008-like [Benincasa hispida] >XP_038...	[more]
XP_004149688.1	2.3e-62	84.66	ethylene-responsive transcription factor ERF011 [Cucumis sativus] >KGN61989.1 hy...	[more]
XP_008457742.1	3.0e-62	85.53	PREDICTED: ethylene-responsive transcription factor ERF008 [Cucumis melo] >KAA00...	[more]
XP_022947660.1	1.6e-55	72.67	ethylene-responsive transcription factor ERF011-like [Cucurbita moschata]	[more]
KAG6605215.1	1.6e-55	72.67	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of Clc02G12940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22174	4.5e-37	58.00	Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SW63	2.7e-34	53.25	Ethylene-responsive transcription factor RAP2-10 OS=Arabidopsis thaliana OX=3702...	[more]
Q9SNE1	8.0e-34	56.12	Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FH94	3.0e-33	50.60	Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8LC30	2.5e-27	50.70	Ethylene-responsive transcription factor RAP2-1 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Clc02G12940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLV5	1.1e-62	84.66	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G279260 PE=...	[more]
A0A5D3C946	1.4e-62	85.53	Ethylene-responsive transcription factor ERF008 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3C5T2	1.4e-62	85.53	ethylene-responsive transcription factor ERF008 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1G7I9	7.7e-56	72.67	ethylene-responsive transcription factor ERF011-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1L6F3	3.8e-55	70.76	ethylene-responsive transcription factor ERF011-like OS=Cucurbita maxima OX=3661...	[more]

BLAST of Clc02G12940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G23340.1	3.2e-38	58.00	DREB and EAR motif protein 3	[more]
AT4G36900.1	1.9e-35	53.25	related to AP2 10	[more]
AT3G50260.1	5.7e-35	56.12	cooperatively regulated by ethylene and jasmonate 1	[more]
AT5G67190.1	2.2e-34	50.60	DREB and EAR motif protein 2	[more]
AT1G46768.1	1.8e-28	50.70	related to AP2 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 13..24 score: 50.61 coord: 51..71 score: 51.08
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 12..75 e-value: 1.2E-33 score: 127.8
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 12..61 e-value: 2.9E-11 score: 43.4
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 12..69 score: 21.561787
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 11..70 e-value: 4.79199E-19 score: 73.8451
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 11..70 e-value: 1.9E-24 score: 87.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..154
None	No IPR available	PANTHER	PTHR31729:SF0	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-10	coord: 6..144
None	No IPR available	PANTHER	PTHR31729	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED	coord: 6..144
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 12..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G12940.1	Clc02G12940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity