Clc02G12240 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGTTTGTTCTGAGGTTCGCCTAGAGGAAGACAAATCCAATGCTAAGAACATCATAACTATTTCTGCTACTGATTCAGATCACTTTCCTTTGGCATTATCTTCCGAAGGAATTGCTTGGGGCCCTTGCCCCTTCAGATTTGAGAATTCATGGCTTCAAGTCCCTTCTTCTCGTTCTATGGTTGAGGTTTGGTGGACTCAACCTCCTATTACTGACTGGCTAGGGCATGGTTTAATGATGAAATTACAAAGTTTGAAATTGGCTATTCGAGAATGGAACACCTACCCACCGTGA atggaagtttgttctgaggttcgcctagaggaagacaaatccaatgctaagaacatcataactatttctgctactgattcagatcactttcctttggcattatcttccgaaggaattgcttggggcccttgccccttcagatttgagaattcatggcttcaagtcccttcttctcgttctatggttgaggtttggtggactcaacctcctattactgactggctagggcatggtttaatgatgaaattacaaagtttgaaattggctattcgagaatggaacacctacccaccgtga ATGGAAGTTTGTTCTGAGGTTCGCCTAGAGGAAGACAAATCCAATGCTAAGAACATCATAACTATTTCTGCTACTGATTCAGATCACTTTCCTTTGGCATTATCTTCCGAAGGAATTGCTTGGGGCCCTTGCCCCTTCAGATTTGAGAATTCATGGCTTCAAGTCCCTTCTTCTCGTTCTATGGTTGAGGTTTGGTGGACTCAACCTCCTATTACTGACTGGCTAGGGCATGGTTTAATGATGAAATTACAAAGTTTGAAATTGGCTATTCGAGAATGGAACACCTACCCACCGTGA MEVCSEVRLEEDKSNAKNIITISATDSDHFPLALSSEGIAWGPCPFRFENSWLQVPSSRSMVEVWWTQPPITDWLGHGLMMKLQSLKLAIREWNTYPP Homology
BLAST of Clc02G12240 vs. NCBI nr
Match: KAE8648339.1 (hypothetical protein Csa_023126 [Cucumis sativus]) HSP 1 Score: 100.9 bits (250), Expect = 6.4e-18 Identity = 39/67 (58.21%), Postives = 48/67 (71.64%), Query Frame = 0
BLAST of Clc02G12240 vs. NCBI nr
Match: KAE8647279.1 (hypothetical protein Csa_002929 [Cucumis sativus]) HSP 1 Score: 90.1 bits (222), Expect = 1.1e-14 Identity = 38/78 (48.72%), Postives = 49/78 (62.82%), Query Frame = 0
BLAST of Clc02G12240 vs. NCBI nr
Match: XP_022158956.1 (uncharacterized protein LOC111025405 [Momordica charantia]) HSP 1 Score: 86.3 bits (212), Expect = 1.6e-13 Identity = 37/74 (50.00%), Postives = 46/74 (62.16%), Query Frame = 0
BLAST of Clc02G12240 vs. NCBI nr
Match: XP_022145822.1 (uncharacterized protein LOC111015182 [Momordica charantia]) HSP 1 Score: 83.6 bits (205), Expect = 1.1e-12 Identity = 34/70 (48.57%), Postives = 44/70 (62.86%), Query Frame = 0
BLAST of Clc02G12240 vs. NCBI nr
Match: RVX15621.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]) HSP 1 Score: 83.2 bits (204), Expect = 1.4e-12 Identity = 34/68 (50.00%), Postives = 43/68 (63.24%), Query Frame = 0
BLAST of Clc02G12240 vs. ExPASy TrEMBL
Match: A0A0A0KMS2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G314840 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 3.1e-18 Identity = 39/67 (58.21%), Postives = 48/67 (71.64%), Query Frame = 0
BLAST of Clc02G12240 vs. ExPASy TrEMBL
Match: A0A6J1E2G6 (uncharacterized protein LOC111025405 OS=Momordica charantia OX=3673 GN=LOC111025405 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 7.9e-14 Identity = 37/74 (50.00%), Postives = 46/74 (62.16%), Query Frame = 0
BLAST of Clc02G12240 vs. ExPASy TrEMBL
Match: A0A6J1CXT6 (uncharacterized protein LOC111015182 OS=Momordica charantia OX=3673 GN=LOC111015182 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 5.1e-13 Identity = 34/70 (48.57%), Postives = 44/70 (62.86%), Query Frame = 0
BLAST of Clc02G12240 vs. ExPASy TrEMBL
Match: A0A438K369 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_522 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 6.7e-13 Identity = 34/68 (50.00%), Postives = 43/68 (63.24%), Query Frame = 0
BLAST of Clc02G12240 vs. ExPASy TrEMBL
Match: A5C9W0 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_000111 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 1.1e-12 Identity = 33/70 (47.14%), Postives = 42/70 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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