Clc02G11880 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G11880
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	BHLH domain-containing protein
Location	ClcChr02: 23326995 .. 23330405 (+)
RNA-Seq Expression	Clc02G11880
Synteny	Clc02G11880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCAACTAATTCAACGCGACGATCTTGTTCAGAATCCGGCCACACCCTCCACCTCCATTGTACCATGCATTGAACTTCCAGGCCACCCAATTCGTTCTCAATCCAACTCCAAGTCTGTACAAGTATCCGCCATTTCAATCTGGTTTTGTTTTCCGGTGTTATTAATTCCTTGTTTAAGAACGATTTTGTTTCTCTGTGAAACTATGGCAATGGCTTTTATTCCGAAAATTTGGACTTTAGAGGAAAAGTTTCGGAATCTGCAACCATAAATGTTGAAACCTATTGGCTGAATTTGGTACTCTTTGTAGTGTCAAGGAAATTTTGAAACCTAAGGACCAAATTGATTTAGGTTAAATATGCAATGAAAGAACTATAGTTTCCATGATTCCTAGAGTTGTTTAACTATCTTTACTATTGTCTTAAGAACATAAATTACCTTTAGCTTACTGGCTTCGTATGGATTATATGTTTTCCGCTGCCAAAGGTTTGATGGGGAATTCAAGGATTCTGCAGCTGCTAGAAAAGTTCAGAAGGCTGACAGAGAGAAATTAAGAAGGGGTCGTTTGAACGAACAATTTGTCGAGCTGGGAAATATTTTAGGTGAAATTAAAAGAATTTCGTCTGTTCACACATTGCTGTTTTTCTATTTCTACCGTCATTTATACCTTATGTTTTGATTTTCTTACGCCTTGTTTCTACTTTTTTATGCTTTTCTGAGTTCAACATTTACATATTCTAGGGAGACCTACAAATTTCCGAGTGGATTTCATTGTATTGTGTTACATACTATTAGTGTACTTGCTTCCAAATGATGTTTAAGTTTCATTCTCTAGATTGTCAGCCTCGAATTTCTTAACTAGAATGTGTTGCAATCAGATTTATTAGAATTCCAAGCTCTGGTTCATTTTACCCATGCTAGGAGCAAAGTGTGAATTTGAACCATTTTACATACGGATTATTGGGTGAGGAGGTGATGCATAGATCAATAGAAAACCTGTGTAAAGGACGGTCATAGGGTAGCAAGTATGTTGTTAACTGACTGGGTCCCCTCTTGTCTGACCATAATTTGGAATATATCAGAATGAGGTATTAGAGTGGAAATTAGTGAGCTTAGTCAATAAGGGAGAGAATAAAACCTGTCTTGTTTTCTGATAGCTTGTAATTTTCCTTCCTCAAGCAATACAAATGGGCATATTTCAGCTAAGAGCTCCTTCACAGATCATTGGTATGTATTGCGAAAATATGAACTCGTGTTTCTGTATTTTTATTACTTATTCTTGGCAATCAAGAATACAACTGTACAACCTATAGCACATATCTAGTTCAAGTAAGATCATTTTTTTGAAAAAAATTATTCTCTAGGTGTGGTTTGTGCAGTCATTTGCCTCTGGATTAGGAACATGGGATTACTTACGTTGATATTAGCTTTAACTCTGCAGATCCCGATAGGCCCAAAAATGACAAAGCAAGGATTTTAATGGATACAATTCAATTGCTGAAGGATCTGACATCTCAAGTGAACAAATTGAAAACTGAACATGCTAATTTGATAGAAGAATCACACGAGGTGATATTTTGTATGTCCTGGTATATAAATAAATTAGACAATTTTGAATATGCTACTTTAATAGAAGAATCAGACTGAGGTGATATTTTGTATGTGCTAGTCTATAAATAAATTAGACAATTATCTTATACCAAGCAATTAATATTAGTTCACCACATGACTTTCTTCAACTGCAGCTAGCCCAGGAAAAGAGTGATCTGAGAGAAGAGAAGCCGTTGCTTACATCTGATATTGAGAATCTTAATGCTCAGTATCAGCAGAAACTCAGGGCTACATACCCTTGGGCTGTCATGGATCACTCGGTTGTCATGGCCCCTGCCCCCTTTCCATTTCCAGTGCCAATGCAAATGCCTCCAGGGCCATTTCCCTTGCATCCATCCTTGCAACCTTATACATTCTTTGGAAATCCGGATCCCAGGGTAATTGCAAACCCTTGTTCCACCTTCGTCCCATACATACCTCCAAATTCCTTGACCGAGCAACAGTCCCCCCAAAATGCACCACCTTTCATTCAGTCAGGCAATCGGTCTGATAACTTCAGTGAGCAAAATTCCAGGAGCAAGTTCTCAGTTGAAAGCAAGATTGAGAAAAGTGTAGATTCCAATGAAGTTGCAACTTACCTGGAGTTGAAAACTCCTGGATCTTCCTCAGATCAGGTTAGTTTATAGTACTAACCTCCTGAAGCTGGTCTGTAGTTAATATACTTATATCCATACCATCATCTAAGTTTGTTCATTTGCAGGATTCATCGTTTGAATGTTCAAACGGTAAGAACAGAAAGGAAAATAATCTATCAGAAGAGAGTTCGTCAAGTAGATGTTCTTCATCTTGTAGTTTAGGGGATAATTCGTCTAGTAGCACGCCAAATGGACGAAAATCTACTGATATATGTGGAAACCCATAAAAGTTGCAGATTCACCTAAATTGGTCCCTGAATTTTATTTTTGATGGTCTATAACTTTCTCAAGAACTTCTTAGTGCTTATCTAGTTGTCTGCAACTGAGGTGGATCATCTTCAATGCAACGTAAAGGGCCGTCACAAAATTAATGGTATTTTGAGATTGTGAACTAGTATTTTTACCTTACCTCCTTTGTGAAGCCTTTAAAGTTGCGGCAACTATTTAATCCATCTCCATCTTATCTACCTGGACATGGCTGTGCAAGTGCAATGCAAGCAATAAGGTTTTGGGCCTAGGGTTTGTTTTGCTGCAAAAATCCCACACTGAGAAATTAGCTAAAGCATTCTACAGATGGTTGGTCCATTCCTTTAAATACTTTTCGTTTCCTTATGCTAAATCTCCAGGTTATGTCATTGTTGATGTCTGACAGACAATGTGACAGATATTTTCGTTTAAAAAATCATGTGGAAATGACTCTGAGAGCATGTAGATGTGAAGTATAGATACATGATATTTTGAGAAATTATGTTGAAATTTTGAATCAAGAGACGCTACTTGTCGGTCTCATGCCTGATCGAAATGGGAGCAATCGCATCATCATTGGCAGTAAGACCAAGAAGGTGAAATGATTATGAGGAACGAACGCAAGGTCTTGAATGCTGAAAGAGATGGTGGGGGAGAGGCCATTAATGCTGATATTATCCAGAAAAAGGTCTTGAATGAAAGGTGGAAAAGCATCCATATTATGAGTGCCCCAAAAACAGATTGCTTTCCTTGCTGCTTGGGAAAATCTAGATATGTTTAAACTTGTTCACATGACATTGGTGAAGTAGAAAAGTGTCTTGAGCCCTCTACTTGATGGTCTTCAAAGGTTGTGCCAGTTACGATTGAACTAAATTTACTTTGACTTCTTAGTCTAATTCAGTTGGAGCAATCCACTT

mRNA sequence

ATGGATCAACTAATTCAACGCGACGATCTTGTTCAGAATCCGGCCACACCCTCCACCTCCATTGTACCATGCATTGAACTTCCAGGCCACCCAATTCGTTCTCAATCCAACTCCAAGTCTGTACAAGTATCCGCCATTTCAATCTGGTTTTGTTTTCCGGTGTTATTAATTCCTTGTTTAAGAACGATTTTGTTTCTCTGTGAAACTATGGCAATGGCTTTTATTCCGAAAATTTGGACTTTAGAGGAAAACTTACTGGCTTCGTATGGATTATATGTTTTCCGCTGCCAAAGGTTTGATGGGGAATTCAAGGATTCTGCAGCTGCTAGAAAAGTTCAGAAGGCTGACAGAGAGAAATTAAGAAGGGGTCGTTTGAACGAACAATTTGTCGAGCTGGGAAATATTTTAGATCCCGATAGGCCCAAAAATGACAAAGCAAGGATTTTAATGGATACAATTCAATTGCTGAAGGATCTGACATCTCAAGTGAACAAATTGAAAACTGAACATGCTAATTTGATAGAAGAATCACACGAGCTAGCCCAGGAAAAGAGTGATCTGAGAGAAGAGAAGCCGTTGCTTACATCTGATATTGAGAATCTTAATGCTCAGTATCAGCAGAAACTCAGGGCTACATACCCTTGGGCTGTCATGGATCACTCGGTTGTCATGGCCCCTGCCCCCTTTCCATTTCCAGTGCCAATGCAAATGCCTCCAGGGCCATTTCCCTTGCATCCATCCTTGCAACCTTATACATTCTTTGGAAATCCGGATCCCAGGGTAATTGCAAACCCTTGTTCCACCTTCGTCCCATACATACCTCCAAATTCCTTGACCGAGCAACAGTCCCCCCAAAATGCACCACCTTTCATTCAGTCAGGCAATCGGTCTGATAACTTCAGTGAGCAAAATTCCAGGAGCAAGTTCTCAGTTGAAAGCAAGATTGAGAAAAGTGTAGATTCCAATGAAGTTGCAACTTACCTGGAGTTGAAAACTCCTGGATCTTCCTCAGATCAGGATTCATCGTTTGAATGTTCAAACGGTAAGAACAGAAAGGAAAATAATCTATCAGAAGAGAGTTCGTCAAGTAGATGTTCTTCATCTTGTAGTTTAGGGGATAATTCGTCTAGTAGCACGCCAAATGGACGAAAATCTACTGATATATGTGGAAACCCATAAAAGTTGCAGATTCACCTAAATTGGTCCCTGAATTTTATTTTTGATGGTCTATAACTTTCTCAAGAACTTCTTAGTGCTTATCTAGTTGTCTGCAACTGAGGTGGATCATCTTCAATGCAACGTAAAGGGCCGTCACAAAATTAATGGTATTTTGAGATTGTGAACTAGTATTTTTACCTTACCTCCTTTGTGAAGCCTTTAAAGTTGCGGCAACTATTTAATCCATCTCCATCTTATCTACCTGGACATGGCTGTGCAAGTGCAATGCAAGCAATAAGGTTTTGGGCCTAGGGTTTGTTTTGCTGCAAAAATCCCACACTGAGAAATTAGCTAAAGCATTCTACAGATGGTTGGTCCATTCCTTTAAATACTTTTCGTTTCCTTATGCTAAATCTCCAGGTTATGTCATTGTTGATGTCTGACAGACAATGTGACAGATATTTTCGTTTAAAAAATCATGTGGAAATGACTCTGAGAGCATGTAGATGTGAAGTATAGATACATGATATTTTGAGAAATTATGTTGAAATTTTGAATCAAGAGACGCTACTTGTCGGTCTCATGCCTGATCGAAATGGGAGCAATCGCATCATCATTGGCAGTAAGACCAAGAAGGTGAAATGATTATGAGGAACGAACGCAAGGTCTTGAATGCTGAAAGAGATGGTGGGGGAGAGGCCATTAATGCTGATATTATCCAGAAAAAGGTCTTGAATGAAAGGTGGAAAAGCATCCATATTATGAGTGCCCCAAAAACAGATTGCTTTCCTTGCTGCTTGGGAAAATCTAGATATGTTTAAACTTGTTCACATGACATTGGTGAAGTAGAAAAGTGTCTTGAGCCCTCTACTTGATGGTCTTCAAAGGTTGTGCCAGTTACGATTGAACTAAATTTACTTTGACTTCTTAGTCTAATTCAGTTGGAGCAATCCACTT

Coding sequence (CDS)

ATGGATCAACTAATTCAACGCGACGATCTTGTTCAGAATCCGGCCACACCCTCCACCTCCATTGTACCATGCATTGAACTTCCAGGCCACCCAATTCGTTCTCAATCCAACTCCAAGTCTGTACAAGTATCCGCCATTTCAATCTGGTTTTGTTTTCCGGTGTTATTAATTCCTTGTTTAAGAACGATTTTGTTTCTCTGTGAAACTATGGCAATGGCTTTTATTCCGAAAATTTGGACTTTAGAGGAAAACTTACTGGCTTCGTATGGATTATATGTTTTCCGCTGCCAAAGGTTTGATGGGGAATTCAAGGATTCTGCAGCTGCTAGAAAAGTTCAGAAGGCTGACAGAGAGAAATTAAGAAGGGGTCGTTTGAACGAACAATTTGTCGAGCTGGGAAATATTTTAGATCCCGATAGGCCCAAAAATGACAAAGCAAGGATTTTAATGGATACAATTCAATTGCTGAAGGATCTGACATCTCAAGTGAACAAATTGAAAACTGAACATGCTAATTTGATAGAAGAATCACACGAGCTAGCCCAGGAAAAGAGTGATCTGAGAGAAGAGAAGCCGTTGCTTACATCTGATATTGAGAATCTTAATGCTCAGTATCAGCAGAAACTCAGGGCTACATACCCTTGGGCTGTCATGGATCACTCGGTTGTCATGGCCCCTGCCCCCTTTCCATTTCCAGTGCCAATGCAAATGCCTCCAGGGCCATTTCCCTTGCATCCATCCTTGCAACCTTATACATTCTTTGGAAATCCGGATCCCAGGGTAATTGCAAACCCTTGTTCCACCTTCGTCCCATACATACCTCCAAATTCCTTGACCGAGCAACAGTCCCCCCAAAATGCACCACCTTTCATTCAGTCAGGCAATCGGTCTGATAACTTCAGTGAGCAAAATTCCAGGAGCAAGTTCTCAGTTGAAAGCAAGATTGAGAAAAGTGTAGATTCCAATGAAGTTGCAACTTACCTGGAGTTGAAAACTCCTGGATCTTCCTCAGATCAGGATTCATCGTTTGAATGTTCAAACGGTAAGAACAGAAAGGAAAATAATCTATCAGAAGAGAGTTCGTCAAGTAGATGTTCTTCATCTTGTAGTTTAGGGGATAATTCGTCTAGTAGCACGCCAAATGGACGAAAATCTACTGATATATGTGGAAACCCATAA

Protein sequence

MDQLIQRDDLVQNPATPSTSIVPCIELPGHPIRSQSNSKSVQVSAISIWFCFPVLLIPCLRTILFLCETMAMAFIPKIWTLEENLLASYGLYVFRCQRFDGEFKDSAAARKVQKADREKLRRGRLNEQFVELGNILDPDRPKNDKARILMDTIQLLKDLTSQVNKLKTEHANLIEESHELAQEKSDLREEKPLLTSDIENLNAQYQQKLRATYPWAVMDHSVVMAPAPFPFPVPMQMPPGPFPLHPSLQPYTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQSPQNAPPFIQSGNRSDNFSEQNSRSKFSVESKIEKSVDSNEVATYLELKTPGSSSDQDSSFECSNGKNRKENNLSEESSSSRCSSSCSLGDNSSSSTPNGRKSTDICGNP

Homology

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BLAST of Clc02G11880 vs. NCBI nr
Match: XP_008457648.1 (PREDICTED: transcription factor bHLH121 isoform X1 [Cucumis melo])

HSP 1 Score: 518.1 bits (1333), Expect = 6.7e-143
Identity = 289/392 (73.72%), Postives = 309/392 (78.83%), Query Frame = 0


Query: 1   MDQLIQRDDLVQNPATPSTSIVPCIELPGHPIRSQSNSKSVQVSAISIWFCFPVLLIPCL 60
           MDQLIQRDDL+QNP TPS+S+VPC+ELPGHPIRSQS+S+S                    
Sbjct: 1   MDQLIQRDDLLQNPPTPSSSVVPCVELPGHPIRSQSSSRS-------------------- 60

Query: 61  RTILFLCETMAMAFIPKIWTLEENLLASYGLYVFRCQRFDGEFKDSAAARKVQKADREKL 120
                                                  +GEFKDSAAARKVQKADREKL
Sbjct: 61  ---------------------------------------EGEFKDSAAARKVQKADREKL 120

Query: 121 RRGRLNEQFVELGNILDPDRPKNDKARILMDTIQLLKDLTSQVNKLKTEHANLIEESHEL 180
           RRGRLNEQFVELGNILDPDRPKNDKA ILMDTIQLLKDLTSQV+KLK E+A L EES EL
Sbjct: 121 RRGRLNEQFVELGNILDPDRPKNDKATILMDTIQLLKDLTSQVDKLKAEYATLTEESQEL 180

Query: 181 AQEKSDLREEKPLLTSDIENLNAQYQQKLRATYPWAVMDHSVVMAPAPFPFPVPMQMPPG 240
           AQEKSDLREEK LL SDIENLNAQYQQKLRATYPWA MDHSVVMAPAPFPFP+PMQ+PPG
Sbjct: 181 AQEKSDLREEKALLKSDIENLNAQYQQKLRATYPWAAMDHSVVMAPAPFPFPMPMQIPPG 240

Query: 241 PFPLHPSLQPYTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQSPQNAPPFIQSGNRSDNF 300
           P+PLHPSLQPYTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQS QNAPPFIQ  NRS N 
Sbjct: 241 PYPLHPSLQPYTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQSSQNAPPFIQLDNRSRNL 300

Query: 301 SEQNSRSKFSVESKIEKSVDSNEVATYLELKTPGSSSDQDSSFECSNGKNRKENNLSEES 360
           SEQN+ SK S ESKIEKSVDSNEVAT LELKTPGSS+DQD+S+E +N KNRKE+NLSEES
Sbjct: 301 SEQNTGSKSSSESKIEKSVDSNEVATCLELKTPGSSTDQDTSYEQTNDKNRKESNLSEES 333

Query: 361 SSSRCSSSCSLGDNSSSSTPNGRKSTDICGNP 393
           SSSRCSSS SL  NSSSS P+GRKSTDICG+P
Sbjct: 361 SSSRCSSSRSLEANSSSSMPSGRKSTDICGSP 333

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BLAST of Clc02G11880 vs. NCBI nr
Match: XP_004147018.1 (transcription factor bHLH121 [Cucumis sativus] >KGN61896.1 hypothetical protein Csa_006650 [Cucumis sativus])

HSP 1 Score: 511.1 bits (1315), Expect = 8.2e-141
Identity = 287/394 (72.84%), Postives = 307/394 (77.92%), Query Frame = 0


Query: 1   MDQLIQRDDLVQNPATP--STSIVPCIELPGHPIRSQSNSKSVQVSAISIWFCFPVLLIP 60
           MDQLIQRD L+QN  TP  S+S+VPC+ELPGHPIRSQS+S+S                  
Sbjct: 1   MDQLIQRDGLLQNSPTPSSSSSVVPCVELPGHPIRSQSSSRS------------------ 60

Query: 61  CLRTILFLCETMAMAFIPKIWTLEENLLASYGLYVFRCQRFDGEFKDSAAARKVQKADRE 120
                                                    +GEFKDSAAAR+VQKADRE
Sbjct: 61  -----------------------------------------EGEFKDSAAARRVQKADRE 120

Query: 121 KLRRGRLNEQFVELGNILDPDRPKNDKARILMDTIQLLKDLTSQVNKLKTEHANLIEESH 180
           KLRRGRLNEQFVELGNILDPDRPKNDKA ILMDTIQLLKDLTSQVNKLK E+A L EES 
Sbjct: 121 KLRRGRLNEQFVELGNILDPDRPKNDKATILMDTIQLLKDLTSQVNKLKAEYATLTEESQ 180

Query: 181 ELAQEKSDLREEKPLLTSDIENLNAQYQQKLRATYPWAVMDHSVVMAPAPFPFPVPMQMP 240
           ELAQEKSDLREEK LL SDIENLN QYQQKLRATYPWA MDHSVVMAPAPFPFP+PMQMP
Sbjct: 181 ELAQEKSDLREEKALLKSDIENLNTQYQQKLRATYPWAAMDHSVVMAPAPFPFPMPMQMP 240

Query: 241 PGPFPLHPSLQPYTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQSPQNAPPFIQSGNRSD 300
           PGP+PLHPSLQP+TFFGNPDPRVIANPCSTFVPYIPPNSLTEQQS QNAPPFIQS NRS 
Sbjct: 241 PGPYPLHPSLQPFTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQSSQNAPPFIQSDNRSR 300

Query: 301 NFSEQNSRSKFSVESKIEKSVDSNEVATYLELKTPGSSSDQDSSFECSNGKNRKENNLSE 360
           N SEQN+RSK S+ESKIEKS DSNEVAT LELKTPGSS+DQD+S+E +NGKNRKE+NLS 
Sbjct: 301 NLSEQNTRSKSSIESKIEKSEDSNEVATCLELKTPGSSTDQDTSYEQTNGKNRKESNLSV 335

Query: 361 ESSSSRCSSSCSLGDNSSSSTPNGRKSTDICGNP 393
           ESSSSRCSS  SL  NSSSS PNGRKSTDICG+P
Sbjct: 361 ESSSSRCSSPRSLEANSSSSMPNGRKSTDICGSP 335

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BLAST of Clc02G11880 vs. NCBI nr
Match: XP_038902535.1 (transcription factor bHLH121 [Benincasa hispida])

HSP 1 Score: 499.2 bits (1284), Expect = 3.2e-137
Identity = 278/380 (73.16%), Postives = 296/380 (77.89%), Query Frame = 0


Query: 1   MDQLIQRDDLVQNPATPSTSIVPCIELPGHPIRSQSNSKSVQVSAISIWFCFPVLLIPCL 60
           MDQLIQRDDLVQN ATPSTSI PCIELPGHPIRSQS+S+S                    
Sbjct: 1   MDQLIQRDDLVQNLATPSTSIAPCIELPGHPIRSQSSSRS-------------------- 60

Query: 61  RTILFLCETMAMAFIPKIWTLEENLLASYGLYVFRCQRFDGEFKDSAAARKVQKADREKL 120
                                                  +GEFKDSA ARKVQKADREKL
Sbjct: 61  ---------------------------------------EGEFKDSATARKVQKADREKL 120

Query: 121 RRGRLNEQFVELGNILDPDRPKNDKARILMDTIQLLKDLTSQVNKLKTEHANLIEESHEL 180
           RRGRLNEQFVELGNILDPDRPKNDKA ILMDTIQLLKDLTSQVNKLKTE+A L EES+EL
Sbjct: 121 RRGRLNEQFVELGNILDPDRPKNDKATILMDTIQLLKDLTSQVNKLKTEYATLTEESNEL 180

Query: 181 AQEKSDLREEKPLLTSDIENLNAQYQQKLRATYPWAVMDHSVVMAPAPFPFPVPMQMPPG 240
           AQEK+DLREEK LL SDIENLNAQYQQ LRATYPWA MDHSVVM+P PFPFPVPMQMPPG
Sbjct: 181 AQEKNDLREEKALLKSDIENLNAQYQQNLRATYPWAAMDHSVVMSPTPFPFPVPMQMPPG 240

Query: 241 PFPLHPSLQPYTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQSPQNAPPFIQSGNRSDNF 300
           PFPLHPSLQPYTFFGNPDPRVI NPCSTFVP++PPNSLTEQQS +NAPPFIQSGN+S N 
Sbjct: 241 PFPLHPSLQPYTFFGNPDPRVITNPCSTFVPFVPPNSLTEQQSSRNAPPFIQSGNQSHNL 300

Query: 301 SEQNSRSKFSVESKIEKSVDSNEVATYLELKTPGSSSDQDSSFECSNGKNRKENNLSEES 360
           S+Q++ SK S ESKIEKSVDSNEVATYLELKTPGSS+DQD+SFE +N KNR+ENNLS ES
Sbjct: 301 SKQSTGSKSSSESKIEKSVDSNEVATYLELKTPGSSTDQDTSFEQTNSKNRQENNLSAES 321

Query: 361 SSSRCSSSCSLGDNSSSSTP 381
           S SRCSSSCSL  NS SSTP
Sbjct: 361 SLSRCSSSCSLEPNSFSSTP 321

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BLAST of Clc02G11880 vs. NCBI nr
Match: XP_022146203.1 (transcription factor bHLH121-like isoform X1 [Momordica charantia])

HSP 1 Score: 413.3 bits (1061), Expect = 2.3e-111
Identity = 246/385 (63.90%), Postives = 271/385 (70.39%), Query Frame = 0


Query: 1   MDQLIQRDDLVQNPATPSTSIVPCIELPGHPIRSQSNSKSVQVSAISIWFCFPVLLIPCL 60
           MDQLI+ D  +QNPA  S+ +VP  EL G P   +S   S                    
Sbjct: 1   MDQLIRCDAFIQNPAA-SSIVVPRTELSGRPESDRSQPSS-------------------- 60

Query: 61  RTILFLCETMAMAFIPKIWTLEENLLASYGLYVFRCQRFDGEFKDSAAARKVQKADREKL 120
                                                R  GEFKDSAAARKVQKADREKL
Sbjct: 61  -------------------------------------RSGGEFKDSAAARKVQKADREKL 120

Query: 121 RRGRLNEQFVELGNILDPDRPKNDKARILMDTIQLLKDLTSQVNKLKTEHANLIEESHEL 180
           RR RLNEQF ELGNILDP RPKNDKA IL+DTIQLLKDLTS+VNKLKTE+A L EES EL
Sbjct: 121 RRDRLNEQFFELGNILDPGRPKNDKATILVDTIQLLKDLTSEVNKLKTENATLTEESREL 180

Query: 181 AQEKSDLREEKPLLTSDIENLNAQYQQKLRATYPWAVMDHSVVMAPAPFPFPVPMQMPPG 240
           AQEK+DLREEK  L SDIENLNAQYQQ+LRATYPW  MDHSVV+AP PFPFPVPMQMPPG
Sbjct: 181 AQEKNDLREEKASLKSDIENLNAQYQQRLRATYPWPAMDHSVVIAPPPFPFPVPMQMPPG 240

Query: 241 PFPLHPSLQPYTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQSPQNAPPFIQSGNRSDNF 300
           PFP+HPSLQPY F GN +P VIANPCSTFVPYI PNS+ EQQS +N PPF+  GN+S N 
Sbjct: 241 PFPVHPSLQPYPFIGNHNPGVIANPCSTFVPYITPNSVIEQQSSRNTPPFVHPGNQSRNL 300

Query: 301 SEQNSRSKFSVESKIEKSVDSNEVATYLELKTPGSSSDQDSSFECSNGK--NRKENNLSE 360
           S+Q+S SK S ESKIEKSVDS+EVAT LELKTPGSS++QD+SFE +N K   RKENN SE
Sbjct: 301 SKQDSGSKSSSESKIEKSVDSSEVATDLELKTPGSSTEQDTSFEQTNSKKMRRKENNKSE 327

Query: 361 ESSSSRCSSSCSLGDNSSSSTPNGR 384
           ES SSRCSSSCSL  NSSSST NG+
Sbjct: 361 ESFSSRCSSSCSLEVNSSSSTANGK 327

[Close]

BLAST of Clc02G11880 vs. NCBI nr
Match: XP_008457649.1 (PREDICTED: transcription factor bHLH121 isoform X2 [Cucumis melo])

HSP 1 Score: 406.4 bits (1043), Expect = 2.9e-109
Identity = 224/265 (84.53%), Postives = 237/265 (89.43%), Query Frame = 0


Query: 128 QFVELGNILDPDRPKNDKARILMDTIQLLKDLTSQVNKLKTEHANLIEESHELAQEKSDL 187
           QFV L    DPDRPKNDKA ILMDTIQLLKDLTSQV+KLK E+A L EES ELAQEKSDL
Sbjct: 24  QFV-LNPAPDPDRPKNDKATILMDTIQLLKDLTSQVDKLKAEYATLTEESQELAQEKSDL 83

Query: 188 REEKPLLTSDIENLNAQYQQKLRATYPWAVMDHSVVMAPAPFPFPVPMQMPPGPFPLHPS 247
           REEK LL SDIENLNAQYQQKLRATYPWA MDHSVVMAPAPFPFP+PMQ+PPGP+PLHPS
Sbjct: 84  REEKALLKSDIENLNAQYQQKLRATYPWAAMDHSVVMAPAPFPFPMPMQIPPGPYPLHPS 143

Query: 248 LQPYTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQSPQNAPPFIQSGNRSDNFSEQNSRS 307
           LQPYTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQS QNAPPFIQ  NRS N SEQN+ S
Sbjct: 144 LQPYTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQSSQNAPPFIQLDNRSRNLSEQNTGS 203

Query: 308 KFSVESKIEKSVDSNEVATYLELKTPGSSSDQDSSFECSNGKNRKENNLSEESSSSRCSS 367
           K S ESKIEKSVDSNEVAT LELKTPGSS+DQD+S+E +N KNRKE+NLSEESSSSRCSS
Sbjct: 204 KSSSESKIEKSVDSNEVATCLELKTPGSSTDQDTSYEQTNDKNRKESNLSEESSSSRCSS 263

Query: 368 SCSLGDNSSSSTPNGRKSTDICGNP 393
           S SL  NSSSS P+GRKSTDICG+P
Sbjct: 264 SRSLEANSSSSMPSGRKSTDICGSP 287

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BLAST of Clc02G11880 vs. ExPASy Swiss-Prot
Match: Q9LT23 (Transcription factor bHLH121 OS=Arabidopsis thaliana OX=3702 GN=BHLH121 PE=1 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 3.1e-74
Identity = 170/289 (58.82%), Postives = 211/289 (73.01%), Query Frame = 0


Query: 108 AARKVQKADREKLRRGRLNEQFVELGNILDPDRPKNDKARILMDTIQLLKDLTSQVNKLK 167
           +ARK QKA REKLRR +LNE FVELGN+LDP+RPKNDKA IL DT+QLLK+LTS+VNKLK
Sbjct: 57  SARKSQKAGREKLRREKLNEHFVELGNVLDPERPKNDKATILTDTVQLLKELTSEVNKLK 116

Query: 168 TEHANLIEESHELAQEKSDLREEKPLLTSDIENLNAQYQQKLRATYPW-AVMDHSVVMAP 227
           +E+  L +ES EL QEK+DLREEK  L SDIENLN QYQQ+LR+  PW A MDH+V+MAP
Sbjct: 117 SEYTALTDESRELTQEKNDLREEKTSLKSDIENLNLQYQQRLRSMSPWGAAMDHTVMMAP 176

Query: 228 AP-FPFPVPMQMPPGPFPLHPSLQPYTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQS-- 287
            P FP+P+P+ MPPG  P+HPS+  YT+FGN +P +I  PC T++PY+PPN++ EQQS  
Sbjct: 177 PPSFPYPMPIAMPPGSIPMHPSMPSYTYFGNQNPSMIPAPCPTYMPYMPPNTVVEQQSVH 236

Query: 288 -PQNAPPFIQSGNRSDNFSEQNSRSKFSVESKIEKSVDSNEVATYLELKTPGSSSDQDSS 347
            PQN       GNRS     +  R+K S ES+ EK+ DSNEVAT LELKTPGS+SD+D+ 
Sbjct: 237 IPQN------PGNRS-----REPRAKVSRESRSEKAEDSNEVATQLELKTPGSTSDKDTL 296

Query: 348 FECSNGKNRKENN----LSEESSSSRCSSSCSLGDNSSSSTPNGRKSTD 388
                 K  K NN    + E S SS+CSSS S+ D+SSSS+  G +  D
Sbjct: 297 QRPEKTKRCKRNNNNNSIEESSHSSKCSSSPSVRDHSSSSSVAGGQKPD 334

[Close]

BLAST of Clc02G11880 vs. ExPASy Swiss-Prot
Match: Q8W2F2 (Transcription factor bHLH11 OS=Arabidopsis thaliana OX=3702 GN=BHLH11 PE=2 SV=2)

HSP 1 Score: 116.7 bits (291), Expect = 5.9e-25
Identity = 106/272 (38.97%), Postives = 144/272 (52.94%), Query Frame = 0


Query: 113 QKADREKLRRGRLNEQFVELGNILDPDRPKNDKARILMDTIQLLKDLTSQVNKLKTEHAN 172
           QKA+REKLRR +L EQF+ELGN LDP+RPK+DKA +L DTIQ+LKD+ +QV++LK E+  
Sbjct: 48  QKAEREKLRRDKLKEQFLELGNALDPNRPKSDKASVLTDTIQMLKDVMNQVDRLKAEYET 107

Query: 173 LIEESHELAQEKSDLREEKPLLTSDIENLNAQYQQKLRATYPWAVMDHSVVMAPAPFPFP 232
           L +ES EL QEKS+LREEK  L SDIE LNAQYQ +++   PW                 
Sbjct: 108 LSQESRELIQEKSELREEKATLKSDIEILNAQYQHRIKTMVPW----------------- 167

Query: 233 VPMQMPPGPFPLHPSLQPYTFFGNPDPRVIANPCSTFVPY-IPPNSLTEQQSPQNAPPFI 292
           VP      PF                   I    S+F+PY    N LTEQQ+        
Sbjct: 168 VPHYSYHIPFV-----------------AITQGQSSFIPYSASVNPLTEQQASVQQ---- 227

Query: 293 QSGNRSDNFSEQNSRSK-------FSVESKIEKSVDSNEVATYLELKTPGSS-SDQDSSF 352
            S + +D   +Q+S+ K        +     + +   ++V   LELK   SS + QD S 
Sbjct: 228 HSSSSADASMKQDSKIKPLDLDLMMNSNHSGQGNDQKDDVRLKLELKIHASSLAQQDVS- 276

Query: 353 ECSNGKNRKENNLSEESSSSRCSSSCSLGDNS 376
               GK +K +  +  SSS+  S S ++ D+S
Sbjct: 288 ----GKEKKVSLTTTASSSNSYSLSQAVQDSS 276

[Close]

BLAST of Clc02G11880 vs. ExPASy Swiss-Prot
Match: Q10KL8 (Protein IRON-RELATED TRANSCRIPTION FACTOR 3 OS=Oryza sativa subsp. japonica OX=39947 GN=IRO3 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.7e-17
Identity = 56/138 (40.58%), Postives = 84/138 (60.87%), Query Frame = 0


Query: 110 RKVQKADREKLRRGRLNEQFVELGNILDPDRPKNDKARILMDTIQLLKDLTSQVNKLKTE 169
           RKV K++REKL+RG LN+ F ELGN+L+ DR  N KA IL DT ++L+DL SQV  L+ E
Sbjct: 37  RKVHKSEREKLKRGHLNDLFGELGNMLEADRQSNGKACILTDTTRILRDLLSQVKSLRQE 96

Query: 170 HANLIEESHELAQEKSDLREEKPLLTSDIENLNAQYQQKLRATYPWAVMDHSVVMAPAPF 229
           ++ L  ES+ +  E+++L++E   L S+I +L  + + +   +  W    H    +P P 
Sbjct: 97  NSTLQNESNYVTMERNELQDENGALRSEISDLQNELRMRATGSPGWG---HGATGSPLPV 156

Query: 230 PFPVPMQMPPGPFPLHPS 248
           P P P  + P   P+ PS
Sbjct: 157 P-PSPGTVFPSQQPMQPS 170

[Close]

BLAST of Clc02G11880 vs. ExPASy Swiss-Prot
Match: Q69V10 (Transcription factor BHLH062 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH062 PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.5e-15
Identity = 49/136 (36.03%), Postives = 83/136 (61.03%), Query Frame = 0


Query: 105 DSAAARKVQKADREKLRRGRLNEQFVELGNILDPDRPKNDKARILMDTIQLLKDLTSQVN 164
           D  A +++ K++REKL+R + N+ F ELGN+L+PDR  N KA +L +T ++LKDL SQV 
Sbjct: 31  DKKAPKRIHKSEREKLKRDKQNDLFNELGNLLEPDRQNNGKACVLGETTRILKDLLSQVE 90

Query: 165 KLKTEHANLIEESHELAQEKSDLREEKPLLTSDIENLNAQYQQKLRATYPWA-VMDHSVV 224
            L+ E+++L  ESH +A E+++L ++  +L ++I  L  + + ++     W+ V     +
Sbjct: 91  SLRKENSSLKNESHYVALERNELHDDNSMLRTEILELQNELRTRMEGNPVWSHVNTRPAL 150

Query: 225 MAPAPFPFPVPMQMPP 240
             P P     P+Q  P
Sbjct: 151 RVPYPTTGVFPVQHLP 166

[Close]

BLAST of Clc02G11880 vs. ExPASy Swiss-Prot
Match: Q9FH37 (Transcription factor ILR3 OS=Arabidopsis thaliana OX=3702 GN=ILR3 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 4.0e-13
Identity = 64/177 (36.16%), Postives = 94/177 (53.11%), Query Frame = 0


Query: 114 KADREKLRRGRLNEQFVELGNILDP-DRPKNDKARILMDTIQLLKDLTSQVNKLKTEHAN 173
           KA REK RR RLN++F+ELG IL+P + PK DKA IL+D ++++  L  +  KLK  +++
Sbjct: 76  KACREKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDAVRMVTQLRGEAQKLKDSNSS 135

Query: 174 LIEESHELAQEKSDLREEKPLLTSDIENLNAQYQQKLRATYPWAVMDHSVVMAPAPFPFP 233
           L ++  EL  EK++LR+EK  L ++ E L    +Q+L+A           + AP P  FP
Sbjct: 136 LQDKIKELKTEKNELRDEKQRLKTEKEKL----EQQLKA-----------MNAPQPSFFP 195

Query: 234 VPMQMPPGPFPLHPSLQPYTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQSPQNAPP 290
            P  MP   F       P    GN    +I+ P      ++PP S+   Q     PP
Sbjct: 196 APPMMPTA-FASAQGQAP----GNKMVPIISYPGVAMWQFMPPASVDTSQDHVLRPP 232

[Close]

BLAST of Clc02G11880 vs. ExPASy TrEMBL
Match: A0A1S3C6M9 (transcription factor bHLH121 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497296 PE=4 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 3.3e-143
Identity = 289/392 (73.72%), Postives = 309/392 (78.83%), Query Frame = 0


Query: 1   MDQLIQRDDLVQNPATPSTSIVPCIELPGHPIRSQSNSKSVQVSAISIWFCFPVLLIPCL 60
           MDQLIQRDDL+QNP TPS+S+VPC+ELPGHPIRSQS+S+S                    
Sbjct: 1   MDQLIQRDDLLQNPPTPSSSVVPCVELPGHPIRSQSSSRS-------------------- 60

Query: 61  RTILFLCETMAMAFIPKIWTLEENLLASYGLYVFRCQRFDGEFKDSAAARKVQKADREKL 120
                                                  +GEFKDSAAARKVQKADREKL
Sbjct: 61  ---------------------------------------EGEFKDSAAARKVQKADREKL 120

Query: 121 RRGRLNEQFVELGNILDPDRPKNDKARILMDTIQLLKDLTSQVNKLKTEHANLIEESHEL 180
           RRGRLNEQFVELGNILDPDRPKNDKA ILMDTIQLLKDLTSQV+KLK E+A L EES EL
Sbjct: 121 RRGRLNEQFVELGNILDPDRPKNDKATILMDTIQLLKDLTSQVDKLKAEYATLTEESQEL 180

Query: 181 AQEKSDLREEKPLLTSDIENLNAQYQQKLRATYPWAVMDHSVVMAPAPFPFPVPMQMPPG 240
           AQEKSDLREEK LL SDIENLNAQYQQKLRATYPWA MDHSVVMAPAPFPFP+PMQ+PPG
Sbjct: 181 AQEKSDLREEKALLKSDIENLNAQYQQKLRATYPWAAMDHSVVMAPAPFPFPMPMQIPPG 240

Query: 241 PFPLHPSLQPYTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQSPQNAPPFIQSGNRSDNF 300
           P+PLHPSLQPYTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQS QNAPPFIQ  NRS N 
Sbjct: 241 PYPLHPSLQPYTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQSSQNAPPFIQLDNRSRNL 300

Query: 301 SEQNSRSKFSVESKIEKSVDSNEVATYLELKTPGSSSDQDSSFECSNGKNRKENNLSEES 360
           SEQN+ SK S ESKIEKSVDSNEVAT LELKTPGSS+DQD+S+E +N KNRKE+NLSEES
Sbjct: 301 SEQNTGSKSSSESKIEKSVDSNEVATCLELKTPGSSTDQDTSYEQTNDKNRKESNLSEES 333

Query: 361 SSSRCSSSCSLGDNSSSSTPNGRKSTDICGNP 393
           SSSRCSSS SL  NSSSS P+GRKSTDICG+P
Sbjct: 361 SSSRCSSSRSLEANSSSSMPSGRKSTDICGSP 333

[Close]

BLAST of Clc02G11880 vs. ExPASy TrEMBL
Match: A0A0A0LPK4 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G263910 PE=4 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 4.0e-141
Identity = 287/394 (72.84%), Postives = 307/394 (77.92%), Query Frame = 0


Query: 1   MDQLIQRDDLVQNPATP--STSIVPCIELPGHPIRSQSNSKSVQVSAISIWFCFPVLLIP 60
           MDQLIQRD L+QN  TP  S+S+VPC+ELPGHPIRSQS+S+S                  
Sbjct: 1   MDQLIQRDGLLQNSPTPSSSSSVVPCVELPGHPIRSQSSSRS------------------ 60

Query: 61  CLRTILFLCETMAMAFIPKIWTLEENLLASYGLYVFRCQRFDGEFKDSAAARKVQKADRE 120
                                                    +GEFKDSAAAR+VQKADRE
Sbjct: 61  -----------------------------------------EGEFKDSAAARRVQKADRE 120

Query: 121 KLRRGRLNEQFVELGNILDPDRPKNDKARILMDTIQLLKDLTSQVNKLKTEHANLIEESH 180
           KLRRGRLNEQFVELGNILDPDRPKNDKA ILMDTIQLLKDLTSQVNKLK E+A L EES 
Sbjct: 121 KLRRGRLNEQFVELGNILDPDRPKNDKATILMDTIQLLKDLTSQVNKLKAEYATLTEESQ 180

Query: 181 ELAQEKSDLREEKPLLTSDIENLNAQYQQKLRATYPWAVMDHSVVMAPAPFPFPVPMQMP 240
           ELAQEKSDLREEK LL SDIENLN QYQQKLRATYPWA MDHSVVMAPAPFPFP+PMQMP
Sbjct: 181 ELAQEKSDLREEKALLKSDIENLNTQYQQKLRATYPWAAMDHSVVMAPAPFPFPMPMQMP 240

Query: 241 PGPFPLHPSLQPYTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQSPQNAPPFIQSGNRSD 300
           PGP+PLHPSLQP+TFFGNPDPRVIANPCSTFVPYIPPNSLTEQQS QNAPPFIQS NRS 
Sbjct: 241 PGPYPLHPSLQPFTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQSSQNAPPFIQSDNRSR 300

Query: 301 NFSEQNSRSKFSVESKIEKSVDSNEVATYLELKTPGSSSDQDSSFECSNGKNRKENNLSE 360
           N SEQN+RSK S+ESKIEKS DSNEVAT LELKTPGSS+DQD+S+E +NGKNRKE+NLS 
Sbjct: 301 NLSEQNTRSKSSIESKIEKSEDSNEVATCLELKTPGSSTDQDTSYEQTNGKNRKESNLSV 335

Query: 361 ESSSSRCSSSCSLGDNSSSSTPNGRKSTDICGNP 393
           ESSSSRCSS  SL  NSSSS PNGRKSTDICG+P
Sbjct: 361 ESSSSRCSSPRSLEANSSSSMPNGRKSTDICGSP 335

[Close]

BLAST of Clc02G11880 vs. ExPASy TrEMBL
Match: A0A6J1CXY9 (transcription factor bHLH121-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015477 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 1.1e-111
Identity = 246/385 (63.90%), Postives = 271/385 (70.39%), Query Frame = 0


Query: 1   MDQLIQRDDLVQNPATPSTSIVPCIELPGHPIRSQSNSKSVQVSAISIWFCFPVLLIPCL 60
           MDQLI+ D  +QNPA  S+ +VP  EL G P   +S   S                    
Sbjct: 1   MDQLIRCDAFIQNPAA-SSIVVPRTELSGRPESDRSQPSS-------------------- 60

Query: 61  RTILFLCETMAMAFIPKIWTLEENLLASYGLYVFRCQRFDGEFKDSAAARKVQKADREKL 120
                                                R  GEFKDSAAARKVQKADREKL
Sbjct: 61  -------------------------------------RSGGEFKDSAAARKVQKADREKL 120

Query: 121 RRGRLNEQFVELGNILDPDRPKNDKARILMDTIQLLKDLTSQVNKLKTEHANLIEESHEL 180
           RR RLNEQF ELGNILDP RPKNDKA IL+DTIQLLKDLTS+VNKLKTE+A L EES EL
Sbjct: 121 RRDRLNEQFFELGNILDPGRPKNDKATILVDTIQLLKDLTSEVNKLKTENATLTEESREL 180

Query: 181 AQEKSDLREEKPLLTSDIENLNAQYQQKLRATYPWAVMDHSVVMAPAPFPFPVPMQMPPG 240
           AQEK+DLREEK  L SDIENLNAQYQQ+LRATYPW  MDHSVV+AP PFPFPVPMQMPPG
Sbjct: 181 AQEKNDLREEKASLKSDIENLNAQYQQRLRATYPWPAMDHSVVIAPPPFPFPVPMQMPPG 240

Query: 241 PFPLHPSLQPYTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQSPQNAPPFIQSGNRSDNF 300
           PFP+HPSLQPY F GN +P VIANPCSTFVPYI PNS+ EQQS +N PPF+  GN+S N 
Sbjct: 241 PFPVHPSLQPYPFIGNHNPGVIANPCSTFVPYITPNSVIEQQSSRNTPPFVHPGNQSRNL 300

Query: 301 SEQNSRSKFSVESKIEKSVDSNEVATYLELKTPGSSSDQDSSFECSNGK--NRKENNLSE 360
           S+Q+S SK S ESKIEKSVDS+EVAT LELKTPGSS++QD+SFE +N K   RKENN SE
Sbjct: 301 SKQDSGSKSSSESKIEKSVDSSEVATDLELKTPGSSTEQDTSFEQTNSKKMRRKENNKSE 327

Query: 361 ESSSSRCSSSCSLGDNSSSSTPNGR 384
           ES SSRCSSSCSL  NSSSST NG+
Sbjct: 361 ESFSSRCSSSCSLEVNSSSSTANGK 327

[Close]

BLAST of Clc02G11880 vs. ExPASy TrEMBL
Match: A0A1S3C798 (transcription factor bHLH121 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497296 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 1.4e-109
Identity = 224/265 (84.53%), Postives = 237/265 (89.43%), Query Frame = 0


Query: 128 QFVELGNILDPDRPKNDKARILMDTIQLLKDLTSQVNKLKTEHANLIEESHELAQEKSDL 187
           QFV L    DPDRPKNDKA ILMDTIQLLKDLTSQV+KLK E+A L EES ELAQEKSDL
Sbjct: 24  QFV-LNPAPDPDRPKNDKATILMDTIQLLKDLTSQVDKLKAEYATLTEESQELAQEKSDL 83

Query: 188 REEKPLLTSDIENLNAQYQQKLRATYPWAVMDHSVVMAPAPFPFPVPMQMPPGPFPLHPS 247
           REEK LL SDIENLNAQYQQKLRATYPWA MDHSVVMAPAPFPFP+PMQ+PPGP+PLHPS
Sbjct: 84  REEKALLKSDIENLNAQYQQKLRATYPWAAMDHSVVMAPAPFPFPMPMQIPPGPYPLHPS 143

Query: 248 LQPYTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQSPQNAPPFIQSGNRSDNFSEQNSRS 307
           LQPYTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQS QNAPPFIQ  NRS N SEQN+ S
Sbjct: 144 LQPYTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQSSQNAPPFIQLDNRSRNLSEQNTGS 203

Query: 308 KFSVESKIEKSVDSNEVATYLELKTPGSSSDQDSSFECSNGKNRKENNLSEESSSSRCSS 367
           K S ESKIEKSVDSNEVAT LELKTPGSS+DQD+S+E +N KNRKE+NLSEESSSSRCSS
Sbjct: 204 KSSSESKIEKSVDSNEVATCLELKTPGSSTDQDTSYEQTNDKNRKESNLSEESSSSRCSS 263

Query: 368 SCSLGDNSSSSTPNGRKSTDICGNP 393
           S SL  NSSSS P+GRKSTDICG+P
Sbjct: 264 SRSLEANSSSSMPSGRKSTDICGSP 287

[Close]

BLAST of Clc02G11880 vs. ExPASy TrEMBL
Match: A0A6J1CXG2 (transcription factor bHLH121-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015477 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 3.8e-99
Identity = 213/340 (62.65%), Postives = 236/340 (69.41%), Query Frame = 0


Query: 1   MDQLIQRDDLVQNPATPSTSIVPCIELPGHPIRSQSNSKSVQVSAISIWFCFPVLLIPCL 60
           MDQLI+ D  +QNPA  S+ +VP  EL G P   +S   S                    
Sbjct: 1   MDQLIRCDAFIQNPAA-SSIVVPRTELSGRPESDRSQPSS-------------------- 60

Query: 61  RTILFLCETMAMAFIPKIWTLEENLLASYGLYVFRCQRFDGEFKDSAAARKVQKADREKL 120
                                                R  GEFKDSAAARKVQKADREKL
Sbjct: 61  -------------------------------------RSGGEFKDSAAARKVQKADREKL 120

Query: 121 RRGRLNEQFVELGNILDPDRPKNDKARILMDTIQLLKDLTSQVNKLKTEHANLIEESHEL 180
           RR RLNEQF ELGNILDP RPKNDKA IL+DTIQLLKDLTS+VNKLKTE+A L EES EL
Sbjct: 121 RRDRLNEQFFELGNILDPGRPKNDKATILVDTIQLLKDLTSEVNKLKTENATLTEESREL 180

Query: 181 AQEKSDLREEKPLLTSDIENLNAQYQQKLRATYPWAVMDHSVVMAPAPFPFPVPMQMPPG 240
           AQEK+DLREEK  L SDIENLNAQYQQ+LRATYPW  MDHSVV+AP PFPFPVPMQMPPG
Sbjct: 181 AQEKNDLREEKASLKSDIENLNAQYQQRLRATYPWPAMDHSVVIAPPPFPFPVPMQMPPG 240

Query: 241 PFPLHPSLQPYTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQSPQNAPPFIQSGNRSDNF 300
           PFP+HPSLQPY F GN +P VIANPCSTFVPYI PNS+ EQQS +N PPF+  GN+S N 
Sbjct: 241 PFPVHPSLQPYPFIGNHNPGVIANPCSTFVPYITPNSVIEQQSSRNTPPFVHPGNQSRNL 282

Query: 301 SEQNSRSKFSVESKIEKSVDSNEVATYLELKTPGSSSDQD 341
           S+Q+S SK S ESKIEKSVDS+EVAT LELKTPGSS++Q+
Sbjct: 301 SKQDSGSKSSSESKIEKSVDSSEVATDLELKTPGSSTEQE 282

[Close]

BLAST of Clc02G11880 vs. TAIR 10
Match: AT3G19860.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 280.4 bits (716), Expect = 2.2e-75
Identity = 170/289 (58.82%), Postives = 211/289 (73.01%), Query Frame = 0


Query: 108 AARKVQKADREKLRRGRLNEQFVELGNILDPDRPKNDKARILMDTIQLLKDLTSQVNKLK 167
           +ARK QKA REKLRR +LNE FVELGN+LDP+RPKNDKA IL DT+QLLK+LTS+VNKLK
Sbjct: 4   SARKSQKAGREKLRREKLNEHFVELGNVLDPERPKNDKATILTDTVQLLKELTSEVNKLK 63

Query: 168 TEHANLIEESHELAQEKSDLREEKPLLTSDIENLNAQYQQKLRATYPW-AVMDHSVVMAP 227
           +E+  L +ES EL QEK+DLREEK  L SDIENLN QYQQ+LR+  PW A MDH+V+MAP
Sbjct: 64  SEYTALTDESRELTQEKNDLREEKTSLKSDIENLNLQYQQRLRSMSPWGAAMDHTVMMAP 123

Query: 228 AP-FPFPVPMQMPPGPFPLHPSLQPYTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQS-- 287
            P FP+P+P+ MPPG  P+HPS+  YT+FGN +P +I  PC T++PY+PPN++ EQQS  
Sbjct: 124 PPSFPYPMPIAMPPGSIPMHPSMPSYTYFGNQNPSMIPAPCPTYMPYMPPNTVVEQQSVH 183

Query: 288 -PQNAPPFIQSGNRSDNFSEQNSRSKFSVESKIEKSVDSNEVATYLELKTPGSSSDQDSS 347
            PQN       GNRS     +  R+K S ES+ EK+ DSNEVAT LELKTPGS+SD+D+ 
Sbjct: 184 IPQN------PGNRS-----REPRAKVSRESRSEKAEDSNEVATQLELKTPGSTSDKDTL 243

Query: 348 FECSNGKNRKENN----LSEESSSSRCSSSCSLGDNSSSSTPNGRKSTD 388
                 K  K NN    + E S SS+CSSS S+ D+SSSS+  G +  D
Sbjct: 244 QRPEKTKRCKRNNNNNSIEESSHSSKCSSSPSVRDHSSSSSVAGGQKPD 281

[Close]

BLAST of Clc02G11880 vs. TAIR 10
Match: AT3G19860.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 280.4 bits (716), Expect = 2.2e-75
Identity = 170/289 (58.82%), Postives = 211/289 (73.01%), Query Frame = 0


Query: 108 AARKVQKADREKLRRGRLNEQFVELGNILDPDRPKNDKARILMDTIQLLKDLTSQVNKLK 167
           +ARK QKA REKLRR +LNE FVELGN+LDP+RPKNDKA IL DT+QLLK+LTS+VNKLK
Sbjct: 57  SARKSQKAGREKLRREKLNEHFVELGNVLDPERPKNDKATILTDTVQLLKELTSEVNKLK 116

Query: 168 TEHANLIEESHELAQEKSDLREEKPLLTSDIENLNAQYQQKLRATYPW-AVMDHSVVMAP 227
           +E+  L +ES EL QEK+DLREEK  L SDIENLN QYQQ+LR+  PW A MDH+V+MAP
Sbjct: 117 SEYTALTDESRELTQEKNDLREEKTSLKSDIENLNLQYQQRLRSMSPWGAAMDHTVMMAP 176

Query: 228 AP-FPFPVPMQMPPGPFPLHPSLQPYTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQS-- 287
            P FP+P+P+ MPPG  P+HPS+  YT+FGN +P +I  PC T++PY+PPN++ EQQS  
Sbjct: 177 PPSFPYPMPIAMPPGSIPMHPSMPSYTYFGNQNPSMIPAPCPTYMPYMPPNTVVEQQSVH 236

Query: 288 -PQNAPPFIQSGNRSDNFSEQNSRSKFSVESKIEKSVDSNEVATYLELKTPGSSSDQDSS 347
            PQN       GNRS     +  R+K S ES+ EK+ DSNEVAT LELKTPGS+SD+D+ 
Sbjct: 237 IPQN------PGNRS-----REPRAKVSRESRSEKAEDSNEVATQLELKTPGSTSDKDTL 296

Query: 348 FECSNGKNRKENN----LSEESSSSRCSSSCSLGDNSSSSTPNGRKSTD 388
                 K  K NN    + E S SS+CSSS S+ D+SSSS+  G +  D
Sbjct: 297 QRPEKTKRCKRNNNNNSIEESSHSSKCSSSPSVRDHSSSSSVAGGQKPD 334

[Close]

BLAST of Clc02G11880 vs. TAIR 10
Match: AT4G36060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 116.7 bits (291), Expect = 4.2e-26
Identity = 106/272 (38.97%), Postives = 144/272 (52.94%), Query Frame = 0


Query: 113 QKADREKLRRGRLNEQFVELGNILDPDRPKNDKARILMDTIQLLKDLTSQVNKLKTEHAN 172
           QKA+REKLRR +L EQF+ELGN LDP+RPK+DKA +L DTIQ+LKD+ +QV++LK E+  
Sbjct: 48  QKAEREKLRRDKLKEQFLELGNALDPNRPKSDKASVLTDTIQMLKDVMNQVDRLKAEYET 107

Query: 173 LIEESHELAQEKSDLREEKPLLTSDIENLNAQYQQKLRATYPWAVMDHSVVMAPAPFPFP 232
           L +ES EL QEKS+LREEK  L SDIE LNAQYQ +++   PW                 
Sbjct: 108 LSQESRELIQEKSELREEKATLKSDIEILNAQYQHRIKTMVPW----------------- 167

Query: 233 VPMQMPPGPFPLHPSLQPYTFFGNPDPRVIANPCSTFVPY-IPPNSLTEQQSPQNAPPFI 292
           VP      PF                   I    S+F+PY    N LTEQQ+        
Sbjct: 168 VPHYSYHIPFV-----------------AITQGQSSFIPYSASVNPLTEQQASVQQ---- 227

Query: 293 QSGNRSDNFSEQNSRSK-------FSVESKIEKSVDSNEVATYLELKTPGSS-SDQDSSF 352
            S + +D   +Q+S+ K        +     + +   ++V   LELK   SS + QD S 
Sbjct: 228 HSSSSADASMKQDSKIKPLDLDLMMNSNHSGQGNDQKDDVRLKLELKIHASSLAQQDVS- 276

Query: 353 ECSNGKNRKENNLSEESSSSRCSSSCSLGDNS 376
               GK +K +  +  SSS+  S S ++ D+S
Sbjct: 288 ----GKEKKVSLTTTASSSNSYSLSQAVQDSS 276

[Close]

BLAST of Clc02G11880 vs. TAIR 10
Match: AT4G36060.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 116.7 bits (291), Expect = 4.2e-26
Identity = 106/272 (38.97%), Postives = 144/272 (52.94%), Query Frame = 0


Query: 113 QKADREKLRRGRLNEQFVELGNILDPDRPKNDKARILMDTIQLLKDLTSQVNKLKTEHAN 172
           QKA+REKLRR +L EQF+ELGN LDP+RPK+DKA +L DTIQ+LKD+ +QV++LK E+  
Sbjct: 30  QKAEREKLRRDKLKEQFLELGNALDPNRPKSDKASVLTDTIQMLKDVMNQVDRLKAEYET 89

Query: 173 LIEESHELAQEKSDLREEKPLLTSDIENLNAQYQQKLRATYPWAVMDHSVVMAPAPFPFP 232
           L +ES EL QEKS+LREEK  L SDIE LNAQYQ +++   PW                 
Sbjct: 90  LSQESRELIQEKSELREEKATLKSDIEILNAQYQHRIKTMVPW----------------- 149

Query: 233 VPMQMPPGPFPLHPSLQPYTFFGNPDPRVIANPCSTFVPY-IPPNSLTEQQSPQNAPPFI 292
           VP      PF                   I    S+F+PY    N LTEQQ+        
Sbjct: 150 VPHYSYHIPFV-----------------AITQGQSSFIPYSASVNPLTEQQASVQQ---- 209

Query: 293 QSGNRSDNFSEQNSRSK-------FSVESKIEKSVDSNEVATYLELKTPGSS-SDQDSSF 352
            S + +D   +Q+S+ K        +     + +   ++V   LELK   SS + QD S 
Sbjct: 210 HSSSSADASMKQDSKIKPLDLDLMMNSNHSGQGNDQKDDVRLKLELKIHASSLAQQDVS- 258

Query: 353 ECSNGKNRKENNLSEESSSSRCSSSCSLGDNS 376
               GK +K +  +  SSS+  S S ++ D+S
Sbjct: 270 ----GKEKKVSLTTTASSSNSYSLSQAVQDSS 258

[Close]

BLAST of Clc02G11880 vs. TAIR 10
Match: AT5G54680.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 2.8e-14
Identity = 64/177 (36.16%), Postives = 94/177 (53.11%), Query Frame = 0


Query: 114 KADREKLRRGRLNEQFVELGNILDP-DRPKNDKARILMDTIQLLKDLTSQVNKLKTEHAN 173
           KA REK RR RLN++F+ELG IL+P + PK DKA IL+D ++++  L  +  KLK  +++
Sbjct: 76  KACREKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDAVRMVTQLRGEAQKLKDSNSS 135

Query: 174 LIEESHELAQEKSDLREEKPLLTSDIENLNAQYQQKLRATYPWAVMDHSVVMAPAPFPFP 233
           L ++  EL  EK++LR+EK  L ++ E L    +Q+L+A           + AP P  FP
Sbjct: 136 LQDKIKELKTEKNELRDEKQRLKTEKEKL----EQQLKA-----------MNAPQPSFFP 195

Query: 234 VPMQMPPGPFPLHPSLQPYTFFGNPDPRVIANPCSTFVPYIPPNSLTEQQSPQNAPP 290
            P  MP   F       P    GN    +I+ P      ++PP S+   Q     PP
Sbjct: 196 APPMMPTA-FASAQGQAP----GNKMVPIISYPGVAMWQFMPPASVDTSQDHVLRPP 232

The following BLAST results are available for this feature:

BLAST of Clc02G11880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457648.1	6.7e-143	73.72	PREDICTED: transcription factor bHLH121 isoform X1 [Cucumis melo]	[more]
XP_004147018.1	8.2e-141	72.84	transcription factor bHLH121 [Cucumis sativus] >KGN61896.1 hypothetical protein ...	[more]
XP_038902535.1	3.2e-137	73.16	transcription factor bHLH121 [Benincasa hispida]	[more]
XP_022146203.1	2.3e-111	63.90	transcription factor bHLH121-like isoform X1 [Momordica charantia]	[more]
XP_008457649.1	2.9e-109	84.53	PREDICTED: transcription factor bHLH121 isoform X2 [Cucumis melo]	[more]

BLAST of Clc02G11880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LT23	3.1e-74	58.82	Transcription factor bHLH121 OS=Arabidopsis thaliana OX=3702 GN=BHLH121 PE=1 SV=...	[more]
Q8W2F2	5.9e-25	38.97	Transcription factor bHLH11 OS=Arabidopsis thaliana OX=3702 GN=BHLH11 PE=2 SV=2	[more]
Q10KL8	2.7e-17	40.58	Protein IRON-RELATED TRANSCRIPTION FACTOR 3 OS=Oryza sativa subsp. japonica OX=3...	[more]
Q69V10	1.5e-15	36.03	Transcription factor BHLH062 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH062...	[more]
Q9FH37	4.0e-13	36.16	Transcription factor ILR3 OS=Arabidopsis thaliana OX=3702 GN=ILR3 PE=1 SV=1	[more]

BLAST of Clc02G11880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C6M9	3.3e-143	73.72	transcription factor bHLH121 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497296 ...	[more]
A0A0A0LPK4	4.0e-141	72.84	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G263910 PE=4 S...	[more]
A0A6J1CXY9	1.1e-111	63.90	transcription factor bHLH121-like isoform X1 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A1S3C798	1.4e-109	84.53	transcription factor bHLH121 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497296 ...	[more]
A0A6J1CXG2	3.8e-99	62.65	transcription factor bHLH121-like isoform X2 OS=Momordica charantia OX=3673 GN=L...	[more]

BLAST of Clc02G11880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19860.1	2.2e-75	58.82	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G19860.2	2.2e-75	58.82	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G36060.1	4.2e-26	38.97	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G36060.2	4.2e-26	38.97	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G54680.1	2.8e-14	36.16	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 149..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 330..392
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 359..392
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 330..344
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 274..308
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 274..316
None	No IPR available	PANTHER	PTHR47001:SF3	TRANSCRIPTION FACTOR BHLH121	coord: 97..385
None	No IPR available	CDD	cd11446	bHLH_AtILR3_like	coord: 114..188 e-value: 3.15091E-32 score: 114.353
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 115..165 e-value: 4.0E-4 score: 29.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 110..159 e-value: 6.5E-7 score: 29.3
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 109..159 score: 12.017097
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 106..199 e-value: 1.2E-9 score: 40.1
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 108..173
IPR044579	Transcription factor bHLH11/121	PANTHER	PTHR47001	TRANSCRIPTION FACTOR BHLH121	coord: 97..385

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G11880.2	Clc02G11880.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055072	iron ion homeostasis
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity