Clc02G09830 (gene) Watermelon (cordophanus) v2

Overview
NameClc02G09830
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
LocationClcChr02: 14550625 .. 14553309 (+)
RNA-Seq ExpressionClc02G09830
SyntenyClc02G09830
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGGATTCCGGGAAAGACGGGTTTGAAATTTAAATTAAAAAAAAAAAAAAAAAAAGGTTTGAAAATTTGAACCGTCTTGGAAACTAAATCGAAAGAAAAGTCAACACTGCACTGCACCGCAACACACACGAACCTTCAACAATTCCCCAATTCCCAAAACTACCCTACGACTATTCCAATTAGCTCATAAATCCATTTGGTTCCGCATCTCCCATTCAAGGGTAATCAAGTGAATTCACCCACCAACAAAGTATATATAAATCCCCTGTCCTTCCGAATAAATAAAGTGGTTATATCCTTGCTTCAATTGAATTGAGATGGGCGATTGCAGGCCATTGGGTTTCTTGTTGGGGCTGCCATTTGCCTTGGTTGCCTTAGTTTTATCTGTACTTGGGGCAGTCATCTGGATCATTGGGTGAGTTTTTTTTTTTTTTTTTTTTTTAATTTTTTTTAATTTTTTAAATTTTGAAGTGATTAAAAGTGACAAGTACTGAACTGGGTTGGGGCTGTGTTTTTCTGTTTCTATTGCAGATCTGTGCTGAGTTGCCTGTGTCCGTGTTGCGTGTGCTTTGCGGGGATTGCAAATTTGGCGGTGGGGCTTGTCAAACTGCCGGTCAAGGTGCTCCGATGGTTCACTCATCAAATACCCTGTTGATTCCTTCGCTTTTTTTATTTGTTTTTTTTTTAATAATTTAATTTCCATTATTCAATCCATTATTCCAAGTTTCCTAGTTGTAGATTATTTGGGATGTTTTAATTAGTTGATGTGTATTTGTAATAATGCCATATTTTTCAACATTGATTCTTTGATTGGTTGCCTTTGTTGACCTCAAACCTGTTTCCGCGTGGAATCTCGCTCCACTGTCGCTCAACGTGGGGTGTGGGCTGGGGTCATATCTCTACCGTTTACTCTTTAATTTTTTAATATGTTTTTAATTGAATGGGTTTTACAATGTAATTTAATTTCTTTGGGATACCATTCTTATAGAAATTTCGACCAATAATAGAATAGGTCAAACCTAACATTGAATTTGTGCATATTATTGTTTTTCTTTCTTTTGAAAGTAATGCGTAATTGTAGTTACATGTTAATGGTTAATCAAAAATCAATATCTTATGGGTGTTACAATTCTAGGTTGTTTTTGGATCTTTACATTAATTAAATTTGTATTCATTTATTTTATTTCCTAAACAAATAGTTATCATATTTGCAAGTAGCATCAAGGCACTATGTAAATCTGCATATTCACTACAATAAAAGTGAGTTTCCATGACATAAGGGTATAGCCGGATTGAGGGGAGAGAAAAAACAATGTCATAAATGAAAAAAAAAAATTGCTGTTTTTTTCTAGCAACTTTAGGTTTTTTTTTTTTTTTTTCATGACATTTTGCAATGTCATCGATTTATGACATTTATTAATTATCATTAAATAAATTTAATTATTTACTTTTTAAAGAAATTCAAAATACATGCTTTAAAAAAGAGGAAAAGAAAGGAAAATTGCCAAAAATAACACCCTTAAGTTTTCATATTAGAAAATTAGCACCCTTTTTGAAAATTCGTTCAAAGAGTTTTTCTCATGCCATCTCGCTCGAGATCGAGCCTTGAGATTGATTTAAAAATATGAAAAATATAAGGGATAACAACATAGAAGACCCTAATAAATGCCCTATATTTCAATAATGTCCACTTTTTTTATTATTATTTTAAAAATGTCCATGAAGGTTTCTTAATTACACATAAATTAGGGTCTAATTACCTTTTAGTCCCAAAACTACAATTAATTAAAAACTACAATTAATTAAAAATATTTAAAGGAAAATTTGTACGAATGACCTAAATTGAAGGGCCTAAATAAAATTTGGCCTCCCCCTAGATTTTCAATGAAATATGGCATTTTGATAGTTGACTTTCTAGACAATACTGCTCTCGCTCCTTGGCTCTCGTCTCTCGATACTCGCGCTCCCGACTCTCATAAGTTGGCACTCAACCGTTCAACCATTGCTAGATTTGAAAAGTGGGGTACCATATAAAATCTCTCGACCAATTGTACAATTCTTAATGTCTCTCGATTCTTTCTTCTCTCACTCTTGACCTACTGACGAACACCTACTGGACGATCGACTCTTCGATGATTGACTATTCAATTTTCTCTTGCACAACTTCAGATTGTTAGTTGTCATTTATCGAACAAAGGTGTGCCTTTATTTCGCGTTCGTTTGCGTTTTAGTCTGGGGTATGATTCGTTTGCTTTCGTTTGCAACTTTTTTGTTGCATGTGCTGGTGTTAGGGTTTGTAGAAGTGCCCAAATTGTTCAATAGATTAGGGTTTAGAAGATTAGGGGACTGAGGCACGAGAGAATGCACTAAGATTGAGTGTAGGAGATGAGAGTATTTTGGAGATTGTGGGAGACGATATTTGTTTGCTCTCGACTCTCGGTTTTCTTTTGCATGTGCTGATGTAGATGGTTGTGTGGGTGCTCTTGGTGGATGGTCGAGAGTAGAAAGTCGAGATATCGAGACCTAGGGTTCTAGACAAACCGAGAGTCGAGAGTACTGAGAGCGAGGGTACTGAGAGCAAGAGTACTGAGAGCGAGAGTACTGAGAGCGAGGGTACTGAGAGCAAGAGTACTGAGAGCGAGGGTACTGAGAGCAAGAGTACTGAGAGCCGAGAGTCGTGA

mRNA sequence

ATGATGGGATTCCGGGAAAGACGGGCCATTGGGTTTCTTGTTGGGGCTGCCATTTGCCTTGGTTGCCTTAGTTTTATCTGTACTTGGGGCAGTCATCTGGATCATTGGATCTGTGCTGAGTTGCCTGTGTCCGTGTTGCGTGTGCTTTGCGGGGATTGCAAATTTGGCGGTGGGGCTTGTCAAACTGCCGGTCAAGTTGACTTTCTAGACAATACTGCTCTCGCTCCTTGGCTCTCGTCTCTCGATACTCGCGCTCCCGACTCTCATAAGTTGGCACTCAACCGTTCAACCATTGCTAGATTTGAAAAGGTTCTAGACAAACCGAGAGTCGAGAGTACTGAGAGCGAGGGTACTGAGAGCAAGAGTACTGAGAGCGAGAGTACTGAGAGCGAGGGTACTGAGAGCAAGAGTACTGAGAGCGAGGGTACTGAGAGCAAGAGTACTGAGAGCCGAGAGTCGTGA

Coding sequence (CDS)

ATGATGGGATTCCGGGAAAGACGGGCCATTGGGTTTCTTGTTGGGGCTGCCATTTGCCTTGGTTGCCTTAGTTTTATCTGTACTTGGGGCAGTCATCTGGATCATTGGATCTGTGCTGAGTTGCCTGTGTCCGTGTTGCGTGTGCTTTGCGGGGATTGCAAATTTGGCGGTGGGGCTTGTCAAACTGCCGGTCAAGTTGACTTTCTAGACAATACTGCTCTCGCTCCTTGGCTCTCGTCTCTCGATACTCGCGCTCCCGACTCTCATAAGTTGGCACTCAACCGTTCAACCATTGCTAGATTTGAAAAGGTTCTAGACAAACCGAGAGTCGAGAGTACTGAGAGCGAGGGTACTGAGAGCAAGAGTACTGAGAGCGAGAGTACTGAGAGCGAGGGTACTGAGAGCAAGAGTACTGAGAGCGAGGGTACTGAGAGCAAGAGTACTGAGAGCCGAGAGTCGTGA

Protein sequence

MMGFRERRAIGFLVGAAICLGCLSFICTWGSHLDHWICAELPVSVLRVLCGDCKFGGGACQTAGQVDFLDNTALAPWLSSLDTRAPDSHKLALNRSTIARFEKVLDKPRVESTESEGTESKSTESESTESEGTESKSTESEGTESKSTESRES
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 107..153

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc02G09830.1Clc02G09830.1mRNA