Clc02G08790 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G08790
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Retrotran_gag_3 domain-containing protein
Location	ClcChr02: 10799924 .. 10800662 (+)
RNA-Seq Expression	Clc02G08790
Synteny	Clc02G08790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCATCTGCTACCACTCCATCTTCTTCATCTTCAACAAAGGACCCTATGTCTGCAATTTTTCTTCTCTCAAATATTTGCAACCTTATTTCAATCAGGCTTGATTCCACTAATTGTGTGATGTGGAAATTTCAAATTACAGCAATATTGAAGGCACACAAACTCTTTGGTTTCTCAAGACTCGCCTTCAGCACCTTCCCCTGCTATAATTTCTGTTCCTAATCCATTATTTGAAGAATGGATTGCAAAAGACCAAGTATCGATGACCTTGATTAATGCTACCCTTTCCACTAAAGCACTTGCTTATATTGTTGGTTGCACCTCAGCAAGTGAAACTTTGACGATTCTTGAGAAAAATTATTCATCCAATTTGCGAACAAATATTGTCAATCTGAAGTCTGCACTTCAGACTATGCTCAAGAAACCTGGCGAAACAATTGACTCTTATGTCAAACGGATCAAGGAGATCAAAGACAAGTTATCTAATATCTCTTCCGTCATTAATGTTGAAGATCTTGTCATCTACACTATGAATGGTCTCCCTGCAGAGTATAATGCCTTTCGAACTTCCCTGAGGACCCGATCTCATGCTATCTCATTTGAAGAACTTCATGTTCTTATGAAATCAAAGGAAGCTGCTATTGTCGTTCAAGCTAAGCGTGATGATCTTCTCACTCAACCTACTGTGCTTCTTGCTACCCAATGTTCTCAAAATCAATGTCAATTTTGTCCCTAG

mRNA sequence

ATGGCTTCATCTGCTACCACTCCATCTTCTTCATCTTCAACAAAGGACCCTATGCACACAAACTCTTTGGTTTCTCAAGACTCGCCTTCAGCACCTTCCCCTGCTATAATTTCTGTTCCTAATCCATTATTTGAAGAATGGATTGCAAAAGACCAAGTATCGATGACCTTGATTAATGCTACCCTTTCCACTAAAGCACTTGCTTATATTGTTGGTTGCACCTCAGCAAGTGAAACTTTGACGATTCTTGAGAAAAATTATTCATCCAATTTGCGAACAAATATTGTCAATCTGAAGTCTGCACTTCAGACTATGCTCAAGAAACCTGGCGAAACAATTGACTCTTATGTCAAACGGATCAAGGAGATCAAAGACAAGTTATCTAATATCTCTTCCGTCATTAATGTTGAAGATCTTGTCATCTACACTATGAATGGTCTCCCTGCAGAGTATAATGCCTTTCGAACTTCCCTGAGGACCCGATCTCATGCTATCTCATTTGAAGAACTTCATGTTCTTATGAAATCAAAGGAAGCTGCTATTGTCGTTCAAGCTAAGCGTGATGATCTTCTCACTCAACCTACTGTGCTTCTTGCTACCCAATGTTCTCAAAATCAATGTCAATTTTGTCCCTAG

Coding sequence (CDS)

ATGGCTTCATCTGCTACCACTCCATCTTCTTCATCTTCAACAAAGGACCCTATGCACACAAACTCTTTGGTTTCTCAAGACTCGCCTTCAGCACCTTCCCCTGCTATAATTTCTGTTCCTAATCCATTATTTGAAGAATGGATTGCAAAAGACCAAGTATCGATGACCTTGATTAATGCTACCCTTTCCACTAAAGCACTTGCTTATATTGTTGGTTGCACCTCAGCAAGTGAAACTTTGACGATTCTTGAGAAAAATTATTCATCCAATTTGCGAACAAATATTGTCAATCTGAAGTCTGCACTTCAGACTATGCTCAAGAAACCTGGCGAAACAATTGACTCTTATGTCAAACGGATCAAGGAGATCAAAGACAAGTTATCTAATATCTCTTCCGTCATTAATGTTGAAGATCTTGTCATCTACACTATGAATGGTCTCCCTGCAGAGTATAATGCCTTTCGAACTTCCCTGAGGACCCGATCTCATGCTATCTCATTTGAAGAACTTCATGTTCTTATGAAATCAAAGGAAGCTGCTATTGTCGTTCAAGCTAAGCGTGATGATCTTCTCACTCAACCTACTGTGCTTCTTGCTACCCAATGTTCTCAAAATCAATGTCAATTTTGTCCCTAG

Protein sequence

MASSATTPSSSSSTKDPMHTNSLVSQDSPSAPSPAIISVPNPLFEEWIAKDQVSMTLINATLSTKALAYIVGCTSASETLTILEKNYSSNLRTNIVNLKSALQTMLKKPGETIDSYVKRIKEIKDKLSNISSVINVEDLVIYTMNGLPAEYNAFRTSLRTRSHAISFEELHVLMKSKEAAIVVQAKRDDLLTQPTVLLATQCSQNQCQFCP

Homology

[Close]

BLAST of Clc02G08790 vs. NCBI nr
Match: KAE8645659.1 (hypothetical protein Csa_020439 [Cucumis sativus])

HSP 1 Score: 205.3 bits (521), Expect = 5.2e-49
Identity = 108/182 (59.34%), Postives = 140/182 (76.92%), Query Frame = 0


Query: 26  QDSPSAPSPAIISVPNPLFEEWIAKDQVSMTLINATLSTKALAYIVGCTSASETLTILEK 85
           Q SPS  S  +    NPL+E+WIAKDQ  MT+INATLS +ALAY+VG TS+ +   +L K
Sbjct: 67  QTSPSTTS-TVPPQTNPLYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVWDVLAK 126

Query: 86  NYSSNLRTNIVNLKSALQTMLKKPGETIDSYVKRIKEIKDKLSNISSVINVEDLVIYTMN 145
            YSS  R+N+VNLKS LQT+ KKP E+ID+Y+KRIKEIKDKL+N+S+ IN EDL+IY +N
Sbjct: 127 LYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLLIYALN 186

Query: 146 GLPAEYNAFRTSLRTRSHAISFEELHVLMKSKEAAIVVQAKRDDLLTQPTVLLATQCSQN 205
           GLP EYN FRTS+RTRS  ++FEELHVL++++E+A+  Q+K DD   QPTVLL++  S  
Sbjct: 187 GLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKCDDSYNQPTVLLSSSQSLL 246

Query: 206 QC 208
            C
Sbjct: 247 SC 247

[Close]

BLAST of Clc02G08790 vs. NCBI nr
Match: XP_011658579.1 (uncharacterized protein LOC105436058 [Cucumis sativus])

HSP 1 Score: 205.3 bits (521), Expect = 5.2e-49
Identity = 108/182 (59.34%), Postives = 140/182 (76.92%), Query Frame = 0


Query: 26  QDSPSAPSPAIISVPNPLFEEWIAKDQVSMTLINATLSTKALAYIVGCTSASETLTILEK 85
           Q SPS  S  +    NPL+E+WIAKDQ  MT+INATLS +ALAY+VG TS+ +   +L K
Sbjct: 67  QTSPSTTS-TVPPQTNPLYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVWDVLAK 126

Query: 86  NYSSNLRTNIVNLKSALQTMLKKPGETIDSYVKRIKEIKDKLSNISSVINVEDLVIYTMN 145
            YSS  R+N+VNLKS LQT+ KKP E+ID+Y+KRIKEIKDKL+N+S+ IN EDL+IY +N
Sbjct: 127 LYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLLIYALN 186

Query: 146 GLPAEYNAFRTSLRTRSHAISFEELHVLMKSKEAAIVVQAKRDDLLTQPTVLLATQCSQN 205
           GLP EYN FRTS+RTRS  ++FEELHVL++++E+A+  Q+K DD   QPTVLL++  S  
Sbjct: 187 GLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKCDDSYNQPTVLLSSSQSLL 246

Query: 206 QC 208
            C
Sbjct: 247 SC 247

[Close]

BLAST of Clc02G08790 vs. NCBI nr
Match: KAG6588985.1 (Retrovirus-related Pol polyprotein from transposon RE1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 202.2 bits (513), Expect = 4.4e-48
Identity = 100/165 (60.61%), Postives = 134/165 (81.21%), Query Frame = 0


Query: 39  VPNPLFEEWIAKDQVSMTLINATLSTKALAYIVGCTSASETLTILEKNYSSNLRTNIVNL 98
           + NP +++W AKDQ  MT+INATLS +ALAY+VG T++ +   +L K YSS+ R+N+VNL
Sbjct: 67  ISNPSYDDWFAKDQALMTVINATLSPEALAYVVGSTTSKQVWNVLAKLYSSSSRSNVVNL 126

Query: 99  KSALQTMLKKPGETIDSYVKRIKEIKDKLSNISSVINVEDLVIYTMNGLPAEYNAFRTSL 158
           KS LQT+ KK  E+ID+Y+KRIKEIKDKL+N+S+V+N EDL+IY +NGLP EYN FRTS+
Sbjct: 127 KSDLQTISKKSDESIDAYIKRIKEIKDKLANVSTVVNDEDLLIYALNGLPTEYNTFRTSM 186

Query: 159 RTRSHAISFEELHVLMKSKEAAIVVQAKRDDLLTQPTVLLATQCS 204
           RTRS  ++FEELHVL+K++E+A+  Q+KRDDL  QPT LLA+  S
Sbjct: 187 RTRSTPVTFEELHVLLKAEESALAKQSKRDDLCKQPTALLASSQS 231

[Close]

BLAST of Clc02G08790 vs. NCBI nr
Match: KAG7015254.1 (hypothetical protein SDJN02_22888, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 202.2 bits (513), Expect = 4.4e-48
Identity = 100/165 (60.61%), Postives = 134/165 (81.21%), Query Frame = 0


Query: 39  VPNPLFEEWIAKDQVSMTLINATLSTKALAYIVGCTSASETLTILEKNYSSNLRTNIVNL 98
           + NP +++W AKDQ  MT+INATLS +ALAY+VG T++ +   +L K YSS+ R+N+VNL
Sbjct: 67  ISNPSYDDWFAKDQALMTVINATLSPEALAYVVGSTTSKQVWNVLAKLYSSSSRSNVVNL 126

Query: 99  KSALQTMLKKPGETIDSYVKRIKEIKDKLSNISSVINVEDLVIYTMNGLPAEYNAFRTSL 158
           KS LQT+ KK  E+ID+Y+KRIKEIKDKL+N+S+V+N EDL+IY +NGLP EYN FRTS+
Sbjct: 127 KSDLQTISKKSDESIDAYIKRIKEIKDKLANVSTVVNDEDLLIYALNGLPTEYNTFRTSM 186

Query: 159 RTRSHAISFEELHVLMKSKEAAIVVQAKRDDLLTQPTVLLATQCS 204
           RTRS  ++FEELHVL+K++E+A+  Q+KRDDL  QPT LLA+  S
Sbjct: 187 RTRSTPVTFEELHVLLKAEESALAKQSKRDDLCKQPTALLASSQS 231

[Close]

BLAST of Clc02G08790 vs. NCBI nr
Match: XP_008448007.1 (PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo])

HSP 1 Score: 201.4 bits (511), Expect = 7.5e-48
Identity = 105/188 (55.85%), Postives = 141/188 (75.00%), Query Frame = 0


Query: 20  TNSLVSQDSPSAPSPAIISVPNPLFEEWIAKDQVSMTLINATLSTKALAYIVGCTSASET 79
           TN    + + S+ +  +    NP +E+WIAKDQ  MT+INATLS +ALAY+VG TS+ + 
Sbjct: 62  TNPCPPRTNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQV 121

Query: 80  LTILEKNYSSNLRTNIVNLKSALQTMLKKPGETIDSYVKRIKEIKDKLSNISSVINVEDL 139
             +L K YSS  R+N+VNLKS LQT+ KKP E+ID+Y+KRIKEIKDKL+N+S+ IN EDL
Sbjct: 122 WDVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDL 181

Query: 140 VIYTMNGLPAEYNAFRTSLRTRSHAISFEELHVLMKSKEAAIVVQAKRDDLLTQPTVLLA 199
           +IY +NGLP EYN FRTS+RTRS  ++FEELHVL++++E+A+  Q+K DD   QPTVLL+
Sbjct: 182 LIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVLLS 241

Query: 200 TQCSQNQC 208
           +  S   C
Sbjct: 242 SSQSLLSC 249

[Close]

BLAST of Clc02G08790 vs. ExPASy TrEMBL
Match: A0A5D3CLI6 (T4.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001120 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 3.6e-48
Identity = 105/188 (55.85%), Postives = 141/188 (75.00%), Query Frame = 0


Query: 20  TNSLVSQDSPSAPSPAIISVPNPLFEEWIAKDQVSMTLINATLSTKALAYIVGCTSASET 79
           TN    + + S+ +  +    NP +E+WIAKDQ  MT+INATLS +ALAY+VG TS+ + 
Sbjct: 62  TNPCPPRTNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQV 121

Query: 80  LTILEKNYSSNLRTNIVNLKSALQTMLKKPGETIDSYVKRIKEIKDKLSNISSVINVEDL 139
             +L K YSS  R+N+VNLKS LQT+ KKP E+ID+Y+KRIKEIKDKL+N+S+ IN EDL
Sbjct: 122 WDVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDL 181

Query: 140 VIYTMNGLPAEYNAFRTSLRTRSHAISFEELHVLMKSKEAAIVVQAKRDDLLTQPTVLLA 199
           +IY +NGLP EYN FRTS+RTRS  ++FEELHVL++++E+A+  Q+K DD   QPTVLL+
Sbjct: 182 LIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVLLS 241

Query: 200 TQCSQNQC 208
           +  S   C
Sbjct: 242 SSQSLLSC 249

[Close]

BLAST of Clc02G08790 vs. ExPASy TrEMBL
Match: A0A1S3BI58 (uncharacterized protein LOC103490319 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 3.6e-48
Identity = 105/188 (55.85%), Postives = 141/188 (75.00%), Query Frame = 0


Query: 20  TNSLVSQDSPSAPSPAIISVPNPLFEEWIAKDQVSMTLINATLSTKALAYIVGCTSASET 79
           TN    + + S+ +  +    NP +E+WIAKDQ  MT+INATLS +ALAY+VG TS+ + 
Sbjct: 62  TNPCPPRTNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQV 121

Query: 80  LTILEKNYSSNLRTNIVNLKSALQTMLKKPGETIDSYVKRIKEIKDKLSNISSVINVEDL 139
             +L K YSS  R+N+VNLKS LQT+ KKP E+ID+Y+KRIKEIKDKL+N+S+ IN EDL
Sbjct: 122 WDVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDL 181

Query: 140 VIYTMNGLPAEYNAFRTSLRTRSHAISFEELHVLMKSKEAAIVVQAKRDDLLTQPTVLLA 199
           +IY +NGLP EYN FRTS+RTRS  ++FEELHVL++++E+A+  Q+K DD   QPTVLL+
Sbjct: 182 LIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVLLS 241

Query: 200 TQCSQNQC 208
           +  S   C
Sbjct: 242 SSQSLLSC 249

[Close]

BLAST of Clc02G08790 vs. ExPASy TrEMBL
Match: A0A1S4DWT9 (uncharacterized protein LOC103490319 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 3.6e-48
Identity = 105/188 (55.85%), Postives = 141/188 (75.00%), Query Frame = 0


Query: 20  TNSLVSQDSPSAPSPAIISVPNPLFEEWIAKDQVSMTLINATLSTKALAYIVGCTSASET 79
           TN    + + S+ +  +    NP +E+WIAKDQ  MT+INATLS +ALAY+VG TS+ + 
Sbjct: 62  TNPCPPRTNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQV 121

Query: 80  LTILEKNYSSNLRTNIVNLKSALQTMLKKPGETIDSYVKRIKEIKDKLSNISSVINVEDL 139
             +L K YSS  R+N+VNLKS LQT+ KKP E+ID+Y+KRIKEIKDKL+N+S+ IN EDL
Sbjct: 122 WDVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDL 181

Query: 140 VIYTMNGLPAEYNAFRTSLRTRSHAISFEELHVLMKSKEAAIVVQAKRDDLLTQPTVLLA 199
           +IY +NGLP EYN FRTS+RTRS  ++FEELHVL++++E+A+  Q+K DD   QPTVLL+
Sbjct: 182 LIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVLLS 241

Query: 200 TQCSQNQC 208
           +  S   C
Sbjct: 242 SSQSLLSC 249

[Close]

BLAST of Clc02G08790 vs. ExPASy TrEMBL
Match: A0A1S3BIR3 (uncharacterized protein LOC103490319 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 3.6e-48
Identity = 105/188 (55.85%), Postives = 141/188 (75.00%), Query Frame = 0


Query: 20  TNSLVSQDSPSAPSPAIISVPNPLFEEWIAKDQVSMTLINATLSTKALAYIVGCTSASET 79
           TN    + + S+ +  +    NP +E+WIAKDQ  MT+INATLS +ALAY+VG TS+ + 
Sbjct: 62  TNPCPPRTNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQV 121

Query: 80  LTILEKNYSSNLRTNIVNLKSALQTMLKKPGETIDSYVKRIKEIKDKLSNISSVINVEDL 139
             +L K YSS  R+N+VNLKS LQT+ KKP E+ID+Y+KRIKEIKDKL+N+S+ IN EDL
Sbjct: 122 WDVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDL 181

Query: 140 VIYTMNGLPAEYNAFRTSLRTRSHAISFEELHVLMKSKEAAIVVQAKRDDLLTQPTVLLA 199
           +IY +NGLP EYN FRTS+RTRS  ++FEELHVL++++E+A+  Q+K DD   QPTVLL+
Sbjct: 182 LIYALNGLPNEYNTFRTSMRTRSQPVTFEELHVLLRAEESALAKQSKGDDSYNQPTVLLS 241

Query: 200 TQCSQNQC 208
           +  S   C
Sbjct: 242 SSQSLLSC 249

[Close]

BLAST of Clc02G08790 vs. ExPASy TrEMBL
Match: A0A5D3D3T6 (Retrotran_gag_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002980 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 7.6e-46
Identity = 106/200 (53.00%), Postives = 140/200 (70.00%), Query Frame = 0


Query: 2   ASSATTPSSSSSTKDPMHTNSLVSQDSPSAPSPAIISVPNPLFEEWIAKDQVSMTLINAT 61
           +SSATT ++SSST +                      + NP +E+W AKDQ  M LINAT
Sbjct: 76  SSSATTQTTSSSTTE----------------------ISNPPYEDWQAKDQAFMFLINAT 135

Query: 62  LSTKALAYIVGCTSASETLTILEKNYSSNLRTNIVNLKSALQTMLKKPGETIDSYVKRIK 121
           LS +AL Y+VGC S+S+    LE++YSSN RTNIVNLKS LQ + KKP E I  Y+K+IK
Sbjct: 136 LSVEALTYVVGCKSSSQVWKTLERHYSSNTRTNIVNLKSDLQQISKKPDEPIGLYIKKIK 195

Query: 122 EIKDKLSNISSVINVEDLVIYTMNGLPAEYNAFRTSLRTRSHAISFEELHVLMKSKEAAI 181
           E+KDKL+N ++++  EDLVIY +NGLP EYNAFRTS++TRS  +SF ELH+L+KS+E+A+
Sbjct: 196 EVKDKLANAATIVEDEDLVIYALNGLPREYNAFRTSMQTRSQPVSFSELHILLKSEESAL 253

Query: 182 VVQAKRDDLLTQPTVLLATQ 202
             Q KR+D+  QPT +LA Q
Sbjct: 256 EKQTKREDISVQPTAMLANQ 253

The following BLAST results are available for this feature:

BLAST of Clc02G08790 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8645659.1	5.2e-49	59.34	hypothetical protein Csa_020439 [Cucumis sativus]	[more]
XP_011658579.1	5.2e-49	59.34	uncharacterized protein LOC105436058 [Cucumis sativus]	[more]
KAG6588985.1	4.4e-48	60.61	Retrovirus-related Pol polyprotein from transposon RE1, partial [Cucurbita argyr...	[more]
KAG7015254.1	4.4e-48	60.61	hypothetical protein SDJN02_22888, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_008448007.1	7.5e-48	55.85	PREDICTED: uncharacterized protein LOC103490319 isoform X2 [Cucumis melo]	[more]

BLAST of Clc02G08790 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc02G08790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CLI6	3.6e-48	55.85	T4.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001120 PE=4 SV=...	[more]
A0A1S3BI58	3.6e-48	55.85	uncharacterized protein LOC103490319 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4DWT9	3.6e-48	55.85	uncharacterized protein LOC103490319 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BIR3	3.6e-48	55.85	uncharacterized protein LOC103490319 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3D3T6	7.6e-46	53.00	Retrotran_gag_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of Clc02G08790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 47..171 e-value: 2.3E-20 score: 72.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	PANTHER	PTHR47481:SF3	GAG-POLYPEPTIDE OF LTR COPIA-TYPE-RELATED	coord: 31..178
None	No IPR available	PANTHER	PTHR47481	FAMILY NOT NAMED	coord: 31..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G08790.1	Clc02G08790.1	mRNA