Clc02G08770 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G08770
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Vascular-related unknown protein 4
Location	ClcChr02: 10601940 .. 10603098 (+)
RNA-Seq Expression	Clc02G08770
Synteny	Clc02G08770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATGCTCTCCTTTATCATTCCTATTACCTCCCCCCTCCATTTTCTCCCCTTTATAAAATCTCCGCCTTTTCTTTGCCTCTCAACCCCCAAATTTTCATTTAATTAAAAACCCCCCTCCTCCTTTTTTTTCTTCTAATTTCTCTCTTCAAAATCCTCAAAAATAATATTCATGGAGAAATCTGTTTATTCATCCACCCCAAAATTCCCTCACCCATTGCCGCCTTCCTTTCCCAGCTCCCCCACCGCCGAAAGCGGCTGGACTGCCTATCTGGACGACCCCTCCGATGACGACGACGCCTACACTTTCCCCACCTCCTCCTTGCTCTCTGACGCCGCTTCTCACGCTGCACGCAAATTCTCCGCCGCCACCGACCCTCCACCTCCACTCACCGACCACCTCAAAATCCCGAAGAAATTGAGTCTCAAGCCTAAACAACCTCATTTTTTTGTTGATACTTCTCTTGAAGACACTGCCAGTTCTCCTGATAATAGCCCCAAGGTCAAGAAGCTAATTTTATCCTTTTTTCTTTTTTTTCCTTCTTTTTTAAAATTGGGACAATTTTTATTATTTTGAATTTAAAATTATTTGGTTTTTGAATTATTGTATGTGTAGGTTGGTGATTTGGTACCGTTCGATGGGAATCATTATCGAAGAAAAAGCTCTCTGGTAATTTATTACAAAAATTATTTAATTTATCATTAAAAAAAAAAAGAATTAAGGGTATATTTATGGAAACCTGTTTGTTTTATGTGGCAGGGAAATGGAGGGAAATATGGAGAAGATGATGAAAGAAAATTGGAGATGAGTTTTAAAAGGAAGGCTACTGAATATACTGACTTGAAAAAAAGAGGACTGTGTTTGGTTCCTTTGTCCATGTTCACGAATTACTTGGGATGAAAATTTCCCCATATATATACGGAGCATAGTTCATAGAATAAGATAATTGTTATGGTCGATATTATCGGTCTTCCACCTCTTACAATTATCGAGGTGTCAAATTCTGGAAAAAAAAAAAAAAGTGTATATGATAGTGAAGATTATAGTCTTTGTAACTAGTAATCTACCTAATTTGGGAAAGATACAAGCATGGCTTTTATAGTCGGCTTATATGTAAAATTGTAAATTTAATTCATAGTAAATTAGTAACTCTGTTATCTG

mRNA sequence

CATGCTCTCCTTTATCATTCCTATTACCTCCCCCCTCCATTTTCTCCCCTTTATAAAATCTCCGCCTTTTCTTTGCCTCTCAACCCCCAAATTTTCATTTAATTAAAAACCCCCCTCCTCCTTTTTTTTCTTCTAATTTCTCTCTTCAAAATCCTCAAAAATAATATTCATGGAGAAATCTGTTTATTCATCCACCCCAAAATTCCCTCACCCATTGCCGCCTTCCTTTCCCAGCTCCCCCACCGCCGAAAGCGGCTGGACTGCCTATCTGGACGACCCCTCCGATGACGACGACGCCTACACTTTCCCCACCTCCTCCTTGCTCTCTGACGCCGCTTCTCACGCTGCACGCAAATTCTCCGCCGCCACCGACCCTCCACCTCCACTCACCGACCACCTCAAAATCCCGAAGAAATTGAGTCTCAAGCCTAAACAACCTCATTTTTTTGTTGATACTTCTCTTGAAGACACTGCCAGTTCTCCTGATAATAGCCCCAAGGTTGGTGATTTGGTACCGTTCGATGGGAATCATTATCGAAGAAAAAGCTCTCTGGGAAATGGAGGGAAATATGGAGAAGATGATGAAAGAAAATTGGAGATGAGTTTTAAAAGGAAGGCTACTGAATATACTGACTTGAAAAAAAGAGGACTGTGTTTGGTTCCTTTGTCCATGTTCACGAATTACTTGGGATGAAAATTTCCCCATATATATACGGAGCATAGTTCATAGAATAAGATAATTGTTATGGTCGATATTATCGGTCTTCCACCTCTTACAATTATCGAGGTGTCAAATTCTGGAAAAAAAAAAAAAAGTGTATATGATAGTGAAGATTATAGTCTTTGTAACTAGTAATCTACCTAATTTGGGAAAGATACAAGCATGGCTTTTATAGTCGGCTTATATGTAAAATTGTAAATTTAATTCATAGTAAATTAGTAACTCTGTTATCTG

Coding sequence (CDS)

ATGGAGAAATCTGTTTATTCATCCACCCCAAAATTCCCTCACCCATTGCCGCCTTCCTTTCCCAGCTCCCCCACCGCCGAAAGCGGCTGGACTGCCTATCTGGACGACCCCTCCGATGACGACGACGCCTACACTTTCCCCACCTCCTCCTTGCTCTCTGACGCCGCTTCTCACGCTGCACGCAAATTCTCCGCCGCCACCGACCCTCCACCTCCACTCACCGACCACCTCAAAATCCCGAAGAAATTGAGTCTCAAGCCTAAACAACCTCATTTTTTTGTTGATACTTCTCTTGAAGACACTGCCAGTTCTCCTGATAATAGCCCCAAGGTTGGTGATTTGGTACCGTTCGATGGGAATCATTATCGAAGAAAAAGCTCTCTGGGAAATGGAGGGAAATATGGAGAAGATGATGAAAGAAAATTGGAGATGAGTTTTAAAAGGAAGGCTACTGAATATACTGACTTGAAAAAAAGAGGACTGTGTTTGGTTCCTTTGTCCATGTTCACGAATTACTTGGGATGA

Protein sequence

MEKSVYSSTPKFPHPLPPSFPSSPTAESGWTAYLDDPSDDDDAYTFPTSSLLSDAASHAARKFSAATDPPPPLTDHLKIPKKLSLKPKQPHFFVDTSLEDTASSPDNSPKVGDLVPFDGNHYRRKSSLGNGGKYGEDDERKLEMSFKRKATEYTDLKKRGLCLVPLSMFTNYLG

Homology

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BLAST of Clc02G08770 vs. NCBI nr
Match: XP_038902043.1 (vascular-related unknown protein 1-like [Benincasa hispida])

HSP 1 Score: 283.9 bits (725), Expect = 9.5e-73
Identity = 151/176 (85.80%), Postives = 155/176 (88.07%), Query Frame = 0


Query: 1   MEKSVYSST-PKFPHPLPPSFPSSPTAESGWTAYLDDPSDDDDAYTFPTSSLLSDAASHA 60
           MEKSVYSST P+FPHPL PSF +S  AESGWTAYLDDPSDDDD YTFPTSSLLSDAASHA
Sbjct: 1   MEKSVYSSTNPQFPHPL-PSFSTSAAAESGWTAYLDDPSDDDDTYTFPTSSLLSDAASHA 60

Query: 61  ARKFS-AATDPPPPLTDHLKIPKKLSLKPKQPHFFVDTSLEDTASSPDNSPKVGDLVPFD 120
           A KFS AA DPPPPLTDHLKI  KL LKPKQ HFFVD SLEDTASSPDNSPKVG L PFD
Sbjct: 61  ACKFSPAAADPPPPLTDHLKISTKLILKPKQTHFFVDASLEDTASSPDNSPKVGHLGPFD 120

Query: 121 GNHYRRKSSLGNGGKYGEDDERKLEMSFKRKATEYTDLKKRGLCLVPLSMFTNYLG 175
           GN+YRRKSSLGNG KY  D ER LEMSFKRKATEYTDLKKRGLCLVPLSMFTNY+G
Sbjct: 121 GNNYRRKSSLGNGKKYRGDHERNLEMSFKRKATEYTDLKKRGLCLVPLSMFTNYMG 175

[Close]

BLAST of Clc02G08770 vs. NCBI nr
Match: XP_008455849.1 (PREDICTED: uncharacterized protein LOC103495948 [Cucumis melo] >TYK00183.1 uncharacterized protein E5676_scaffold1452G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 250.0 bits (637), Expect = 1.5e-62
Identity = 140/174 (80.46%), Postives = 146/174 (83.91%), Query Frame = 0


Query: 1   MEKSVYSSTPKFPHPLPPSFPSSPTAESGWTAYLDDPSDDDDAYTFPTSSLLSDAASHAA 60
           MEKSVYSS  +FPHPL PSFPSS   ESGWTAYLD+PS DDD  TFPTSSLLSDAASHA 
Sbjct: 1   MEKSVYSSAQQFPHPL-PSFPSS-AVESGWTAYLDNPS-DDDTNTFPTSSLLSDAASHAV 60

Query: 61  RKFSAATDPPPPLTDHLKIPKKLSLKPKQPHFFVDTSLEDTASSPDNSPKVGD-LVPFDG 120
               AA  PP  LT+HLKIP KL LKPKQPHFFVDTSLEDTASSPDNSPKVGD L PFDG
Sbjct: 61  ----AAAHPPTTLTNHLKIPTKLILKPKQPHFFVDTSLEDTASSPDNSPKVGDHLGPFDG 120

Query: 121 NHYRRKSSLGNGGKYGEDDERKLEMSFKRKATEYTDLKKRGLCLVPLSMFTNYL 174
           NHYRRKSSLGNG KY  D ER+LE+ FKRKA+EYTDLKKRGLCLVPLSM TNYL
Sbjct: 121 NHYRRKSSLGNGEKY-RDHERRLEIGFKRKASEYTDLKKRGLCLVPLSMLTNYL 166

[Close]

BLAST of Clc02G08770 vs. NCBI nr
Match: KAA0043428.1 (uncharacterized protein E6C27_scaffold1639G00370 [Cucumis melo var. makuwa])

HSP 1 Score: 248.8 bits (634), Expect = 3.4e-62
Identity = 139/174 (79.89%), Postives = 146/174 (83.91%), Query Frame = 0


Query: 1   MEKSVYSSTPKFPHPLPPSFPSSPTAESGWTAYLDDPSDDDDAYTFPTSSLLSDAASHAA 60
           MEKSVYSS  +FPHPL PSFPSS   ESGWTAYLD+PS DDD  T+PTSSLLSDAASHA 
Sbjct: 1   MEKSVYSSAQQFPHPL-PSFPSS-AVESGWTAYLDNPS-DDDTNTYPTSSLLSDAASHAV 60

Query: 61  RKFSAATDPPPPLTDHLKIPKKLSLKPKQPHFFVDTSLEDTASSPDNSPKVGD-LVPFDG 120
               AA  PP  LT+HLKIP KL LKPKQPHFFVDTSLEDTASSPDNSPKVGD L PFDG
Sbjct: 61  ----AAAHPPTTLTNHLKIPTKLILKPKQPHFFVDTSLEDTASSPDNSPKVGDHLGPFDG 120

Query: 121 NHYRRKSSLGNGGKYGEDDERKLEMSFKRKATEYTDLKKRGLCLVPLSMFTNYL 174
           NHYRRKSSLGNG KY  D ER+LE+ FKRKA+EYTDLKKRGLCLVPLSM TNYL
Sbjct: 121 NHYRRKSSLGNGEKY-RDHERRLEIGFKRKASEYTDLKKRGLCLVPLSMLTNYL 166

[Close]

BLAST of Clc02G08770 vs. NCBI nr
Match: XP_011650013.1 (vascular-related unknown protein 1 [Cucumis sativus] >KGN63264.1 hypothetical protein Csa_022464 [Cucumis sativus])

HSP 1 Score: 247.7 bits (631), Expect = 7.5e-62
Identity = 139/174 (79.89%), Postives = 145/174 (83.33%), Query Frame = 0


Query: 1   MEKSVYSSTPKFPHPLPPSFPSSPTAESGWTAYLDDPSDDDDAYTFPTSSLLSDAASHAA 60
           MEKSVYSS  +FPHPL PSFPSS   ESGWTAYLD PS DDD  TFPTSSLLSDAASHA 
Sbjct: 1   MEKSVYSSAQQFPHPL-PSFPSS-ALESGWTAYLDSPS-DDDTNTFPTSSLLSDAASHAV 60

Query: 61  RKFSAATDPPPPLTDHLKIPKKLSLKPKQPHFFVDTSLEDTASSPDNSPKVGD-LVPFDG 120
               AA  PP PLT+HL+ P KL LKPKQPH FVDTSLEDTASSPDNSPKVGD L PFDG
Sbjct: 61  ----AAALPPTPLTNHLRFPTKLILKPKQPHLFVDTSLEDTASSPDNSPKVGDHLGPFDG 120

Query: 121 NHYRRKSSLGNGGKYGEDDERKLEMSFKRKATEYTDLKKRGLCLVPLSMFTNYL 174
           NHYRRKSSLGNG KY  D ER+LE+SFKRKA+EYTDLKKRGLCLVPLSM TNYL
Sbjct: 121 NHYRRKSSLGNGEKY-RDHERRLEISFKRKASEYTDLKKRGLCLVPLSMLTNYL 166

[Close]

BLAST of Clc02G08770 vs. NCBI nr
Match: KAG7034965.1 (hypothetical protein SDJN02_01758, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 218.0 bits (554), Expect = 6.4e-53
Identity = 132/178 (74.16%), Postives = 136/178 (76.40%), Query Frame = 0


Query: 1   MEKSVYSSTPKFPHPLPPSFPSSPTA----ESGWTAYLDDPSDDDDAYTFPTSSLLSDAA 60
           MEKSV SS  +FPHPL PSF SS  A    ES WTAYLDDPS  DDAY+  TSSLLSDAA
Sbjct: 1   MEKSVNSSIQQFPHPL-PSFSSSSAATAVEESAWTAYLDDPS--DDAYSLATSSLLSDAA 60

Query: 61  SHAARKFSAATDPPPPLTDHLKIPKKLSLKPKQPHFFVDTSLEDTASSPDNSPKVGDLVP 120
           SHAA K SA   PPPPL+DHLKIPKKLSLKPK   FFVDTSLEDTASSPDNSPKV D  P
Sbjct: 61  SHAAYKLSA---PPPPLSDHLKIPKKLSLKPK-AQFFVDTSLEDTASSPDNSPKVADFGP 120

Query: 121 FDGNHYRRKSSLGNGGKYGEDDERKLEMSFKRKATEYTDLKKRGLCLVPLSMFTNYLG 175
           FDGN+YRRKSSLGNG K GE   R  EM    K  EYTDLKKRGLCLVPLSM  NYLG
Sbjct: 121 FDGNNYRRKSSLGNGRKMGE-KYRDHEM----KTHEYTDLKKRGLCLVPLSMLANYLG 166

[Close]

BLAST of Clc02G08770 vs. ExPASy Swiss-Prot
Match: Q5BPG5 (Vascular-related unknown protein 4 OS=Arabidopsis thaliana OX=3702 GN=VUP4 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.7e-08
Identity = 55/152 (36.18%), Postives = 73/152 (48.03%), Query Frame = 0


Query: 27  ESGWTAYLDD----PSDDDDAYTFPTSSLLSDAASHAARKFSAATDPPPPLTDHLKIPKK 86
           ES WT Y +D     S   D   F +SS +SDAAS  A K +            +K  + 
Sbjct: 27  ESSWTMYFEDFFEASSSIVDVGDFSSSS-VSDAASFVATKKTLNVSKQEGSNLDIKRTRN 86

Query: 87  LSLKPKQPHFFVDTSLEDTASSPDNSPKVGDLVPFDGNHYRRKSSLGNGGKYGEDDERKL 146
             +   + H      LEDTASSP  SP V  ++    N+ R       GG  G+D++R  
Sbjct: 87  REIPFGRHH-----DLEDTASSPSGSPNVYSMMNLQDNNTRH-----GGGIVGDDEKR-- 146

Query: 147 EMSFKRKATEYTDLKKRGLCLVPLSMFTNYLG 175
             +   +     DLKK+GLCLVPLSM TN+LG
Sbjct: 147 VSAVPNQGGLPIDLKKKGLCLVPLSMVTNFLG 165

[Close]

BLAST of Clc02G08770 vs. ExPASy Swiss-Prot
Match: Q9LSZ3 (Vascular-related unknown protein 1 OS=Arabidopsis thaliana OX=3702 GN=VUP1 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.4e-07
Identity = 59/183 (32.24%), Postives = 82/183 (44.81%), Query Frame = 0


Query: 27  ESGWTAYLDDPSD-------------DDDAYTF--PTSSLLSDAASHAARKFSAATDPPP 86
           ESGWT YLDD S+             D  +Y+    ++SL+SDAA+HA   FS  + P  
Sbjct: 37  ESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSDAATHA---FSGKSFP-- 96

Query: 87  PLTDHLKIPKKLSL-KPKQPHFFVDTSLEDTASSPDNSPKVG-----DLVPFDGNHYRRK 146
                +  P KL   + +      D SLEDTASSP NSPKV         P     Y   
Sbjct: 97  -----VNFPAKLKFGRGRTKKICEDDSLEDTASSPVNSPKVSHFEHIQTPPRKIEDYVSS 156

Query: 147 SSLGNGGKYGEDDERKLEMSFKRKAT--------------EYTDLKKRGLCLVPLSMFTN 175
           S +    +   D + +++   ++K T                 DL+ RGLC+VP+SM  N
Sbjct: 157 SFVMGNIRGMGDHQIQIQEGGEQKVTLMRNLIDGNNNNNNNNMDLRSRGLCVVPISMLAN 209

[Close]

BLAST of Clc02G08770 vs. ExPASy TrEMBL
Match: A0A5D3BK94 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1452G00090 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 7.3e-63
Identity = 140/174 (80.46%), Postives = 146/174 (83.91%), Query Frame = 0


Query: 1   MEKSVYSSTPKFPHPLPPSFPSSPTAESGWTAYLDDPSDDDDAYTFPTSSLLSDAASHAA 60
           MEKSVYSS  +FPHPL PSFPSS   ESGWTAYLD+PS DDD  TFPTSSLLSDAASHA 
Sbjct: 1   MEKSVYSSAQQFPHPL-PSFPSS-AVESGWTAYLDNPS-DDDTNTFPTSSLLSDAASHAV 60

Query: 61  RKFSAATDPPPPLTDHLKIPKKLSLKPKQPHFFVDTSLEDTASSPDNSPKVGD-LVPFDG 120
               AA  PP  LT+HLKIP KL LKPKQPHFFVDTSLEDTASSPDNSPKVGD L PFDG
Sbjct: 61  ----AAAHPPTTLTNHLKIPTKLILKPKQPHFFVDTSLEDTASSPDNSPKVGDHLGPFDG 120

Query: 121 NHYRRKSSLGNGGKYGEDDERKLEMSFKRKATEYTDLKKRGLCLVPLSMFTNYL 174
           NHYRRKSSLGNG KY  D ER+LE+ FKRKA+EYTDLKKRGLCLVPLSM TNYL
Sbjct: 121 NHYRRKSSLGNGEKY-RDHERRLEIGFKRKASEYTDLKKRGLCLVPLSMLTNYL 166

[Close]

BLAST of Clc02G08770 vs. ExPASy TrEMBL
Match: A0A1S3C201 (uncharacterized protein LOC103495948 OS=Cucumis melo OX=3656 GN=LOC103495948 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 7.3e-63
Identity = 140/174 (80.46%), Postives = 146/174 (83.91%), Query Frame = 0


Query: 1   MEKSVYSSTPKFPHPLPPSFPSSPTAESGWTAYLDDPSDDDDAYTFPTSSLLSDAASHAA 60
           MEKSVYSS  +FPHPL PSFPSS   ESGWTAYLD+PS DDD  TFPTSSLLSDAASHA 
Sbjct: 1   MEKSVYSSAQQFPHPL-PSFPSS-AVESGWTAYLDNPS-DDDTNTFPTSSLLSDAASHAV 60

Query: 61  RKFSAATDPPPPLTDHLKIPKKLSLKPKQPHFFVDTSLEDTASSPDNSPKVGD-LVPFDG 120
               AA  PP  LT+HLKIP KL LKPKQPHFFVDTSLEDTASSPDNSPKVGD L PFDG
Sbjct: 61  ----AAAHPPTTLTNHLKIPTKLILKPKQPHFFVDTSLEDTASSPDNSPKVGDHLGPFDG 120

Query: 121 NHYRRKSSLGNGGKYGEDDERKLEMSFKRKATEYTDLKKRGLCLVPLSMFTNYL 174
           NHYRRKSSLGNG KY  D ER+LE+ FKRKA+EYTDLKKRGLCLVPLSM TNYL
Sbjct: 121 NHYRRKSSLGNGEKY-RDHERRLEIGFKRKASEYTDLKKRGLCLVPLSMLTNYL 166

[Close]

BLAST of Clc02G08770 vs. ExPASy TrEMBL
Match: A0A5A7TKT4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1639G00370 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.6e-62
Identity = 139/174 (79.89%), Postives = 146/174 (83.91%), Query Frame = 0


Query: 1   MEKSVYSSTPKFPHPLPPSFPSSPTAESGWTAYLDDPSDDDDAYTFPTSSLLSDAASHAA 60
           MEKSVYSS  +FPHPL PSFPSS   ESGWTAYLD+PS DDD  T+PTSSLLSDAASHA 
Sbjct: 1   MEKSVYSSAQQFPHPL-PSFPSS-AVESGWTAYLDNPS-DDDTNTYPTSSLLSDAASHAV 60

Query: 61  RKFSAATDPPPPLTDHLKIPKKLSLKPKQPHFFVDTSLEDTASSPDNSPKVGD-LVPFDG 120
               AA  PP  LT+HLKIP KL LKPKQPHFFVDTSLEDTASSPDNSPKVGD L PFDG
Sbjct: 61  ----AAAHPPTTLTNHLKIPTKLILKPKQPHFFVDTSLEDTASSPDNSPKVGDHLGPFDG 120

Query: 121 NHYRRKSSLGNGGKYGEDDERKLEMSFKRKATEYTDLKKRGLCLVPLSMFTNYL 174
           NHYRRKSSLGNG KY  D ER+LE+ FKRKA+EYTDLKKRGLCLVPLSM TNYL
Sbjct: 121 NHYRRKSSLGNGEKY-RDHERRLEIGFKRKASEYTDLKKRGLCLVPLSMLTNYL 166

[Close]

BLAST of Clc02G08770 vs. ExPASy TrEMBL
Match: A0A0A0LQF7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G420470 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.6e-62
Identity = 139/174 (79.89%), Postives = 145/174 (83.33%), Query Frame = 0


Query: 1   MEKSVYSSTPKFPHPLPPSFPSSPTAESGWTAYLDDPSDDDDAYTFPTSSLLSDAASHAA 60
           MEKSVYSS  +FPHPL PSFPSS   ESGWTAYLD PS DDD  TFPTSSLLSDAASHA 
Sbjct: 1   MEKSVYSSAQQFPHPL-PSFPSS-ALESGWTAYLDSPS-DDDTNTFPTSSLLSDAASHAV 60

Query: 61  RKFSAATDPPPPLTDHLKIPKKLSLKPKQPHFFVDTSLEDTASSPDNSPKVGD-LVPFDG 120
               AA  PP PLT+HL+ P KL LKPKQPH FVDTSLEDTASSPDNSPKVGD L PFDG
Sbjct: 61  ----AAALPPTPLTNHLRFPTKLILKPKQPHLFVDTSLEDTASSPDNSPKVGDHLGPFDG 120

Query: 121 NHYRRKSSLGNGGKYGEDDERKLEMSFKRKATEYTDLKKRGLCLVPLSMFTNYL 174
           NHYRRKSSLGNG KY  D ER+LE+SFKRKA+EYTDLKKRGLCLVPLSM TNYL
Sbjct: 121 NHYRRKSSLGNGEKY-RDHERRLEISFKRKASEYTDLKKRGLCLVPLSMLTNYL 166

[Close]

BLAST of Clc02G08770 vs. ExPASy TrEMBL
Match: A0A6J1G847 (Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111451703 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.5e-52
Identity = 129/178 (72.47%), Postives = 136/178 (76.40%), Query Frame = 0


Query: 1   MEKSVYSSTPKFPHPLPPSFPSSPTA----ESGWTAYLDDPSDDDDAYTFPTSSLLSDAA 60
           MEKSV SS  +FPHPL PSF +S  A    ES WTAYLDDPS  DDAY+  +SSLLSDAA
Sbjct: 1   MEKSVNSSIQQFPHPL-PSFSTSSAATAVEESAWTAYLDDPS--DDAYSLASSSLLSDAA 60

Query: 61  SHAARKFSAATDPPPPLTDHLKIPKKLSLKPKQPHFFVDTSLEDTASSPDNSPKVGDLVP 120
           SHAA K SA   PPPPL+DHLKIPKKLSLKPK   FFVDTSLEDTASSPDNSPKV D  P
Sbjct: 61  SHAAYKLSA---PPPPLSDHLKIPKKLSLKPK-AQFFVDTSLEDTASSPDNSPKVADFGP 120

Query: 121 FDGNHYRRKSSLGNGGKYGEDDERKLEMSFKRKATEYTDLKKRGLCLVPLSMFTNYLG 175
           FDGN+YRRKSSLGNG + GE   R  EM    K  EYTDLKKRGLCLVPLSM  NYLG
Sbjct: 121 FDGNNYRRKSSLGNGRRMGE-KYRDHEM----KTHEYTDLKKRGLCLVPLSMLANYLG 166

[Close]

BLAST of Clc02G08770 vs. TAIR 10
Match: AT5G54790.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G50930.1); Has 53 Blast hits to 53 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 1.2e-09
Identity = 55/152 (36.18%), Postives = 73/152 (48.03%), Query Frame = 0


Query: 27  ESGWTAYLDD----PSDDDDAYTFPTSSLLSDAASHAARKFSAATDPPPPLTDHLKIPKK 86
           ES WT Y +D     S   D   F +SS +SDAAS  A K +            +K  + 
Sbjct: 27  ESSWTMYFEDFFEASSSIVDVGDFSSSS-VSDAASFVATKKTLNVSKQEGSNLDIKRTRN 86

Query: 87  LSLKPKQPHFFVDTSLEDTASSPDNSPKVGDLVPFDGNHYRRKSSLGNGGKYGEDDERKL 146
             +   + H      LEDTASSP  SP V  ++    N+ R       GG  G+D++R  
Sbjct: 87  REIPFGRHH-----DLEDTASSPSGSPNVYSMMNLQDNNTRH-----GGGIVGDDEKR-- 146

Query: 147 EMSFKRKATEYTDLKKRGLCLVPLSMFTNYLG 175
             +   +     DLKK+GLCLVPLSM TN+LG
Sbjct: 147 VSAVPNQGGLPIDLKKKGLCLVPLSMVTNFLG 165

[Close]

BLAST of Clc02G08770 vs. TAIR 10
Match: AT3G21710.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 57.8 bits (138), Expect = 1.0e-08
Identity = 59/183 (32.24%), Postives = 82/183 (44.81%), Query Frame = 0


Query: 27  ESGWTAYLDDPSD-------------DDDAYTF--PTSSLLSDAASHAARKFSAATDPPP 86
           ESGWT YLDD S+             D  +Y+    ++SL+SDAA+HA   FS  + P  
Sbjct: 37  ESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSDAATHA---FSGKSFP-- 96

Query: 87  PLTDHLKIPKKLSL-KPKQPHFFVDTSLEDTASSPDNSPKVG-----DLVPFDGNHYRRK 146
                +  P KL   + +      D SLEDTASSP NSPKV         P     Y   
Sbjct: 97  -----VNFPAKLKFGRGRTKKICEDDSLEDTASSPVNSPKVSHFEHIQTPPRKIEDYVSS 156

Query: 147 SSLGNGGKYGEDDERKLEMSFKRKAT--------------EYTDLKKRGLCLVPLSMFTN 175
           S +    +   D + +++   ++K T                 DL+ RGLC+VP+SM  N
Sbjct: 157 SFVMGNIRGMGDHQIQIQEGGEQKVTLMRNLIDGNNNNNNNNMDLRSRGLCVVPISMLAN 209

[Close]

BLAST of Clc02G08770 vs. TAIR 10
Match: AT3G21710.1 (unknown protein; Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.1 bits (113), Expect = 8.1e-06
Identity = 41/101 (40.59%), Postives = 52/101 (51.49%), Query Frame = 0


Query: 27  ESGWTAYLDDPSD-------------DDDAYTF--PTSSLLSDAASHAARKFSAATDPPP 86
           ESGWT YLDD S+             D  +Y+    ++SL+SDAA+HA   FS  + P  
Sbjct: 37  ESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSDAATHA---FSGKSFP-- 96

Query: 87  PLTDHLKIPKKLSL-KPKQPHFFVDTSLEDTASSPDNSPKV 112
                +  P KL   + +      D SLEDTASSP NSPKV
Sbjct: 97  -----VNFPAKLKFGRGRTKKICEDDSLEDTASSPVNSPKV 127

[Close]

BLAST of Clc02G08770 vs. TAIR 10
Match: AT3G20557.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G50930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 9.0e-05
Identity = 49/149 (32.89%), Postives = 62/149 (41.61%), Query Frame = 0


Query: 27  ESGWTAYLDDPSDDDDAYTFPTSSLLSDAASHAARKFSAATDPPPPLTDHLKIPKKLSLK 86
           ES WT Y +    +D    +  SS++SDAAS                             
Sbjct: 28  ESSWTMYFE---TEDGLGHYDDSSMMSDAAS----------------------------- 87

Query: 87  PKQPHFFVDTSLEDTASSPDNSPKVGDLVPFDGNHYRRKSSLGNGGKYGEDDERKLEMSF 146
              P   V+   EDTASSP N  +       + N    K+   N GK     E K+    
Sbjct: 88  ---PMGCVE---EDTASSPSN--RTEGYSGMEDNTIEEKTM--NNGKI----EEKILNKN 130

Query: 147 KRKATEY-TDLKKRGLCLVPLSMFTNYLG 175
             K  EY  +LKKRGLCLVPLSM +NY+G
Sbjct: 148 GIKIEEYCAELKKRGLCLVPLSMLSNYIG 130

[Close]

BLAST of Clc02G08770 vs. TAIR 10
Match: AT1G50930.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20557.1); Has 215 Blast hits to 213 proteins in 63 species: Archae - 0; Bacteria - 2; Metazoa - 83; Fungi - 10; Plants - 45; Viruses - 5; Other Eukaryotes - 70 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 4.5e-04
Identity = 45/166 (27.11%), Postives = 72/166 (43.37%), Query Frame = 0


Query: 27  ESGWTAYLDDPSDDDDA---------YTFPTSSLLSDAAS--------HAARKFSAATDP 86
           ES W  Y +D   DD+          Y    SS++SDAAS        +  R+ +   + 
Sbjct: 30  ESSWIVYFEDIDHDDEMVETEGEMTHYYDNDSSMISDAASPVHTTKINNVVRRKANNINT 89

Query: 87  PPPLTDHLKIPKKLSLKPKQPHFFVDTSLEDTASSPDNSPKVGDLVPFDGNHYRRKSSLG 146
            P     +   K+   +  Q     +   EDTASSP N  K+  ++    ++ R   ++ 
Sbjct: 90  NPKKRRIIHQHKEEEEEELQKGEEEEEDEEDTASSPSNKTKIFSVLDHANDNTRYGKTMD 149

Query: 147 N--GGKYGEDDERKLEMSFKRKATEYTDLKKRGLCLVPLSMFTNYL 174
           N    + G   E   ++          +LKKRGLC+VPLSM +N++
Sbjct: 150 NVTSEEIGCITETGSKIKEIMNEEFSAELKKRGLCVVPLSMLSNFI 195

The following BLAST results are available for this feature:

BLAST of Clc02G08770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902043.1	9.5e-73	85.80	vascular-related unknown protein 1-like [Benincasa hispida]	[more]
XP_008455849.1	1.5e-62	80.46	PREDICTED: uncharacterized protein LOC103495948 [Cucumis melo] >TYK00183.1 uncha...	[more]
KAA0043428.1	3.4e-62	79.89	uncharacterized protein E6C27_scaffold1639G00370 [Cucumis melo var. makuwa]	[more]
XP_011650013.1	7.5e-62	79.89	vascular-related unknown protein 1 [Cucumis sativus] >KGN63264.1 hypothetical pr...	[more]
KAG7034965.1	6.4e-53	74.16	hypothetical protein SDJN02_01758, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Clc02G08770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5BPG5	1.7e-08	36.18	Vascular-related unknown protein 4 OS=Arabidopsis thaliana OX=3702 GN=VUP4 PE=2 ...	[more]
Q9LSZ3	1.4e-07	32.24	Vascular-related unknown protein 1 OS=Arabidopsis thaliana OX=3702 GN=VUP1 PE=2 ...	[more]

BLAST of Clc02G08770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BK94	7.3e-63	80.46	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C201	7.3e-63	80.46	uncharacterized protein LOC103495948 OS=Cucumis melo OX=3656 GN=LOC103495948 PE=...	[more]
A0A5A7TKT4	1.6e-62	79.89	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0LQF7	3.6e-62	79.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G420470 PE=4 SV=1	[more]
A0A6J1G847	4.5e-52	72.47	Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111451703 PE=4 SV=1	[more]

BLAST of Clc02G08770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54790.1	1.2e-09	36.18	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G21710.2	1.0e-08	32.24	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]
AT3G21710.1	8.1e-06	40.59	unknown protein; Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bac...	[more]
AT3G20557.1	9.0e-05	32.89	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G50930.1	4.5e-04	27.11	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..78
None	No IPR available	PANTHER	PTHR33974:SF2	VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED	coord: 19..174
IPR039280	VASCULAR-RELATED UNKNOWN PROTEIN	PANTHER	PTHR33974	VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED	coord: 19..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G08770.1	Clc02G08770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010089	xylem development