Clc02G08580 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G08580
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Protein of unknown function (DUF1218)
Location	ClcChr02: 10230896 .. 10231760 (+)
RNA-Seq Expression	Clc02G08580
Synteny	Clc02G08580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCGATAAATAGTTCATTTCCTCCTCTCACAACCCTTTGGTTCAACAGCCTTTGCTTTGTTTTTCCCTCTCATAATATAACCAAGTAAATATCATGAAGTTGGTTGGCGTATTGATTTGTTTGTTGGTGGTAGCCATGGATATTGTGGCTGGCCTGCTTGGGATTGAAGCTGATATTGCACAAAACAAGGTACAAATTCATTCTAAACAAAAACACAAAATTCTTTAACCAAAATAGAATTATATGATTGTGATTATTGTTTGATTAGGTGAAGCATCTTCGACTGTGGATATTTGAGTGCAGAGACCCAAGTGAGCAAGCTTTCAAATTAGGATTAGGAGCAGCAGGGCTTTTGGGATTAGCACATATTATTGCTAATCTGCTTGGTGGTTGCAATTGCATTTGCTCTCAAGAAGAGCTTCAAAAATCTCCCCCAAATAAGCAAATCTCCATTGCATGCCTCATTTTCACTTGGTATTTTATTATTTTCTCTTCTTTCTTCATAATTTATATCAATTTTTCAATTTTTAATTTTTTTTTTTTTTTGGAAAGGATAATTCTTGCAGTGGGAATGTCGATGTTGGTTATTGGGGCATTGGGGAACAACAAATCAAGAGCAACTTGTGGATTCACACACCATCATTTTCTGTCAATTGGAGGGATTTTGTGTTTTGTTCATGGCTTGTTTTGTGTTGCCTATTATGTTACTACCACTGCTGCTGAGTAATGGGAAAAAATGGGAATTTTTTCTTTTCTTTTTTTTTTTTCTCTCTTAATTAAAGGTAAATGATGTATTGTCTCATTCATCTCTTATGTGGCAAATCAGACAAAAACTAATCTAATCATTCTTCTTTTCTTCTCTGCT

mRNA sequence

GGCGATAAATAGTTCATTTCCTCCTCTCACAACCCTTTGGTTCAACAGCCTTTGCTTTGTTTTTCCCTCTCATAATATAACCAAGTAAATATCATGAAGTTGGTTGGCGTATTGATTTGTTTGTTGGTGGTAGCCATGGATATTGTGGCTGGCCTGCTTGGGATTGAAGCTGATATTGCACAAAACAAGGTGAAGCATCTTCGACTGTGGATATTTGAGTGCAGAGACCCAAGTGAGCAAGCTTTCAAATTAGGATTAGGAGCAGCAGGGCTTTTGGGATTAGCACATATTATTGCTAATCTGCTTGGTGGTTGCAATTGCATTTGCTCTCAAGAAGAGCTTCAAAAATCTCCCCCAAATAAGCAAATCTCCATTGCATGCCTCATTTTCACTTGGATAATTCTTGCAGTGGGAATGTCGATGTTGGTTATTGGGGCATTGGGGAACAACAAATCAAGAGCAACTTGTGGATTCACACACCATCATTTTCTGTCAATTGGAGGGATTTTGTGTTTTGTTCATGGCTTGTTTTGTGTTGCCTATTATGTTACTACCACTGCTGCTGAGTAATGGGAAAAAATGGGAATTTTTTCTTTTCTTTTTTTTTTTTCTCTCTTAATTAAAGGTAAATGATGTATTGTCTCATTCATCTCTTATGTGGCAAATCAGACAAAAACTAATCTAATCATTCTTCTTTTCTTCTCTGCT

Coding sequence (CDS)

ATGAAGTTGGTTGGCGTATTGATTTGTTTGTTGGTGGTAGCCATGGATATTGTGGCTGGCCTGCTTGGGATTGAAGCTGATATTGCACAAAACAAGGTGAAGCATCTTCGACTGTGGATATTTGAGTGCAGAGACCCAAGTGAGCAAGCTTTCAAATTAGGATTAGGAGCAGCAGGGCTTTTGGGATTAGCACATATTATTGCTAATCTGCTTGGTGGTTGCAATTGCATTTGCTCTCAAGAAGAGCTTCAAAAATCTCCCCCAAATAAGCAAATCTCCATTGCATGCCTCATTTTCACTTGGATAATTCTTGCAGTGGGAATGTCGATGTTGGTTATTGGGGCATTGGGGAACAACAAATCAAGAGCAACTTGTGGATTCACACACCATCATTTTCTGTCAATTGGAGGGATTTTGTGTTTTGTTCATGGCTTGTTTTGTGTTGCCTATTATGTTACTACCACTGCTGCTGAGTAA

Protein sequence

MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGCNCICSQEELQKSPPNKQISIACLIFTWIILAVGMSMLVIGALGNNKSRATCGFTHHHFLSIGGILCFVHGLFCVAYYVTTTAAE

Homology

[Close]

BLAST of Clc02G08580 vs. NCBI nr
Match: XP_038902419.1 (uncharacterized protein LOC120089064 [Benincasa hispida])

HSP 1 Score: 309.7 bits (792), Expect = 1.5e-80
Identity = 153/158 (96.84%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           M+LVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL
Sbjct: 1   MRLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60

Query: 61  LGLAHIIANLLGGCNCICSQEELQKSPPNKQISIACLIFTWIILAVGMSMLVIGALGNNK 120
           LGLAHIIANLLGGCNCICSQEEL+KSPPNKQ+SIACLIFTWIILAVGMSMLVIGALGNNK
Sbjct: 61  LGLAHIIANLLGGCNCICSQEELEKSPPNKQLSIACLIFTWIILAVGMSMLVIGALGNNK 120

Query: 121 SRATCGFTHHHFLSIGGILCFVHGLFCVAYYVTTTAAE 159
           SRATCGFTHHHFLSIGGILCFVHGLFCVAYYVT TA+E
Sbjct: 121 SRATCGFTHHHFLSIGGILCFVHGLFCVAYYVTATASE 158

[Close]

BLAST of Clc02G08580 vs. NCBI nr
Match: XP_004151872.1 (uncharacterized protein LOC101212188 [Cucumis sativus] >KGN63282.1 hypothetical protein Csa_021781 [Cucumis sativus])

HSP 1 Score: 308.1 bits (788), Expect = 4.3e-80
Identity = 152/158 (96.20%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL
Sbjct: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60

Query: 61  LGLAHIIANLLGGCNCICSQEELQKSPPNKQISIACLIFTWIILAVGMSMLVIGALGNNK 120
           LGLAHIIANLLGGCNCICSQ+EL+KSPPN+QISIACLIFTWIILAVGMSMLVIGA+GNNK
Sbjct: 61  LGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACLIFTWIILAVGMSMLVIGAMGNNK 120

Query: 121 SRATCGFTHHHFLSIGGILCFVHGLFCVAYYVTTTAAE 159
           SRA+CGFTHHHFLSIGGILCFVHGLFCVAYYVT TAAE
Sbjct: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE 158

[Close]

BLAST of Clc02G08580 vs. NCBI nr
Match: XP_008455827.1 (PREDICTED: uncharacterized protein LOC103495927 [Cucumis melo])

HSP 1 Score: 307.8 bits (787), Expect = 5.6e-80
Identity = 151/158 (95.57%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL
Sbjct: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60

Query: 61  LGLAHIIANLLGGCNCICSQEELQKSPPNKQISIACLIFTWIILAVGMSMLVIGALGNNK 120
           LGLAHIIANLLGGCNCICSQ+EL+KSPPN+QISIACL+FTWIILAVGMSMLVIGA+GNNK
Sbjct: 61  LGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACLVFTWIILAVGMSMLVIGAMGNNK 120

Query: 121 SRATCGFTHHHFLSIGGILCFVHGLFCVAYYVTTTAAE 159
           SRA+CGFTHHHFLSIGGILCFVHGLFCVAYYVT TAAE
Sbjct: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE 158

[Close]

BLAST of Clc02G08580 vs. NCBI nr
Match: XP_022944616.1 (uncharacterized protein LOC111449022 [Cucurbita moschata])

HSP 1 Score: 294.7 bits (753), Expect = 4.9e-76
Identity = 144/158 (91.14%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVL+CLLVVAMDIVAGLLGIEADIAQNKVK+LRLWIFECRDPS QA++LGL AAG+
Sbjct: 1   MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGV 60

Query: 61  LGLAHIIANLLGGCNCICSQEELQKSPPNKQISIACLIFTWIILAVGMSMLVIGALGNNK 120
           LGLAH+IANLLGGCNCICSQE L+KSPPNKQISIACL+FTWIILAV MSMLVIGALGNNK
Sbjct: 61  LGLAHVIANLLGGCNCICSQEALEKSPPNKQISIACLVFTWIILAVAMSMLVIGALGNNK 120

Query: 121 SRATCGFTHHHFLSIGGILCFVHGLFCVAYYVTTTAAE 159
           SRA+CGFTHHHFLSIGGILCFVHGLFCVAYYVT TAAE
Sbjct: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE 158

[Close]

BLAST of Clc02G08580 vs. NCBI nr
Match: XP_023512382.1 (uncharacterized protein LOC111777151 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 294.3 bits (752), Expect = 6.4e-76
Identity = 143/158 (90.51%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVL+CLLVVAMDIVAGLLGIEADIAQNKVK+LRLWIFECRDPS QA++LGL AAG+
Sbjct: 1   MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGV 60

Query: 61  LGLAHIIANLLGGCNCICSQEELQKSPPNKQISIACLIFTWIILAVGMSMLVIGALGNNK 120
           LGLAH+IANLLGGCNCICSQE L+KSPPNKQIS+ACL+FTWIILAV MSMLVIGALGNNK
Sbjct: 61  LGLAHVIANLLGGCNCICSQEALEKSPPNKQISVACLVFTWIILAVAMSMLVIGALGNNK 120

Query: 121 SRATCGFTHHHFLSIGGILCFVHGLFCVAYYVTTTAAE 159
           SRA+CGFTHHHFLSIGGILCFVHGLFCVAYYVT TAAE
Sbjct: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE 158

[Close]

BLAST of Clc02G08580 vs. ExPASy TrEMBL
Match: A0A0A0LR43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G423620 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.1e-80
Identity = 152/158 (96.20%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL
Sbjct: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60

Query: 61  LGLAHIIANLLGGCNCICSQEELQKSPPNKQISIACLIFTWIILAVGMSMLVIGALGNNK 120
           LGLAHIIANLLGGCNCICSQ+EL+KSPPN+QISIACLIFTWIILAVGMSMLVIGA+GNNK
Sbjct: 61  LGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACLIFTWIILAVGMSMLVIGAMGNNK 120

Query: 121 SRATCGFTHHHFLSIGGILCFVHGLFCVAYYVTTTAAE 159
           SRA+CGFTHHHFLSIGGILCFVHGLFCVAYYVT TAAE
Sbjct: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE 158

[Close]

BLAST of Clc02G08580 vs. ExPASy TrEMBL
Match: A0A1S3C1S7 (uncharacterized protein LOC103495927 OS=Cucumis melo OX=3656 GN=LOC103495927 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 2.7e-80
Identity = 151/158 (95.57%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL
Sbjct: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60

Query: 61  LGLAHIIANLLGGCNCICSQEELQKSPPNKQISIACLIFTWIILAVGMSMLVIGALGNNK 120
           LGLAHIIANLLGGCNCICSQ+EL+KSPPN+QISIACL+FTWIILAVGMSMLVIGA+GNNK
Sbjct: 61  LGLAHIIANLLGGCNCICSQDELEKSPPNRQISIACLVFTWIILAVGMSMLVIGAMGNNK 120

Query: 121 SRATCGFTHHHFLSIGGILCFVHGLFCVAYYVTTTAAE 159
           SRA+CGFTHHHFLSIGGILCFVHGLFCVAYYVT TAAE
Sbjct: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE 158

[Close]

BLAST of Clc02G08580 vs. ExPASy TrEMBL
Match: A0A6J1FUW3 (uncharacterized protein LOC111449022 OS=Cucurbita moschata OX=3662 GN=LOC111449022 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.4e-76
Identity = 144/158 (91.14%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVL+CLLVVAMDIVAGLLGIEADIAQNKVK+LRLWIFECRDPS QA++LGL AAG+
Sbjct: 1   MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGV 60

Query: 61  LGLAHIIANLLGGCNCICSQEELQKSPPNKQISIACLIFTWIILAVGMSMLVIGALGNNK 120
           LGLAH+IANLLGGCNCICSQE L+KSPPNKQISIACL+FTWIILAV MSMLVIGALGNNK
Sbjct: 61  LGLAHVIANLLGGCNCICSQEALEKSPPNKQISIACLVFTWIILAVAMSMLVIGALGNNK 120

Query: 121 SRATCGFTHHHFLSIGGILCFVHGLFCVAYYVTTTAAE 159
           SRA+CGFTHHHFLSIGGILCFVHGLFCVAYYVT TAAE
Sbjct: 121 SRASCGFTHHHFLSIGGILCFVHGLFCVAYYVTATAAE 158

[Close]

BLAST of Clc02G08580 vs. ExPASy TrEMBL
Match: A0A6J1CID0 (uncharacterized protein LOC111011214 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011214 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.0e-75
Identity = 143/158 (90.51%), Postives = 152/158 (96.20%), Query Frame = 0


Query: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MK+VGVLICLLVVAMDIVAGLLGIEA+IAQNKVK LRLWIFECR+PSEQAFKLGLGAAGL
Sbjct: 1   MKVVGVLICLLVVAMDIVAGLLGIEAEIAQNKVKQLRLWIFECREPSEQAFKLGLGAAGL 60

Query: 61  LGLAHIIANLLGGCNCICSQEELQKSPPNKQISIACLIFTWIILAVGMSMLVIGALGNNK 120
           LGLAHIIANLLGGCNCICSQEE+QKSPPN+Q+S+ACLIFTWIILAVGMSMLVIG L NNK
Sbjct: 61  LGLAHIIANLLGGCNCICSQEEIQKSPPNRQLSLACLIFTWIILAVGMSMLVIGTLSNNK 120

Query: 121 SRATCGFTHHHFLSIGGILCFVHGLFCVAYYVTTTAAE 159
           SRA+CGFTHHHFLSIGGILCFVH LFCVAYYV+ TA E
Sbjct: 121 SRASCGFTHHHFLSIGGILCFVHALFCVAYYVSATADE 158

[Close]

BLAST of Clc02G08580 vs. ExPASy TrEMBL
Match: A0A6J1JAZ6 (uncharacterized protein LOC111484145 OS=Cucurbita maxima OX=3661 GN=LOC111484145 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.7e-74
Identity = 142/158 (89.87%), Postives = 151/158 (95.57%), Query Frame = 0


Query: 1   MKLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGL 60
           MKLVGVL+CLLVVAMDIVAGLLGIEADIAQNKVK+LRLWIFECRDPS QA++LGL AAG+
Sbjct: 1   MKLVGVLVCLLVVAMDIVAGLLGIEADIAQNKVKNLRLWIFECRDPSAQAYRLGLAAAGV 60

Query: 61  LGLAHIIANLLGGCNCICSQEELQKSPPNKQISIACLIFTWIILAVGMSMLVIGALGNNK 120
           LGLAH+IANLLGGCNCICSQE L+KSPPNKQISIACL+FTWIILAV MSMLVIGALGNNK
Sbjct: 61  LGLAHVIANLLGGCNCICSQEALEKSPPNKQISIACLVFTWIILAVAMSMLVIGALGNNK 120

Query: 121 SRATCGFTHHHFLSIGGILCFVHGLFCVAYYVTTTAAE 159
           SRA+CGFTHHHFLSIGGILCFVHG F VAYYVT TAAE
Sbjct: 121 SRASCGFTHHHFLSIGGILCFVHGSFSVAYYVTATAAE 158

[Close]

BLAST of Clc02G08580 vs. TAIR 10
Match: AT2G32280.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 230.3 bits (586), Expect = 1.1e-60
Identity = 99/157 (63.06%), Postives = 135/157 (85.99%), Query Frame = 0


Query: 2   KLVGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLL 61
           K+ G+L+CL++V +D+ A +LGI+A++AQN+VKH+RLW+FECR+PS+ AF+LGLGAA +L
Sbjct: 3   KIGGILVCLVIVGLDVAAAILGIQAEVAQNQVKHMRLWLFECREPSQDAFRLGLGAAAIL 62

Query: 62  GLAHIIANLLGGCNCICSQEELQKSPPNKQISIACLIFTWIILAVGMSMLVIGALGNNKS 121
            +AH++ NL+GGC CICSQ+E Q+S   +QIS+ACL+ TWI+ AVG   +VIG + N+KS
Sbjct: 63  VMAHVLLNLVGGCLCICSQDEFQRSSSTRQISMACLVLTWIVFAVGFGSIVIGTMSNSKS 122

Query: 122 RATCGFTHHHFLSIGGILCFVHGLFCVAYYVTTTAAE 159
           R++CGFTHHHFLSIGGILCF+H LFCVAYYV+ TAA+
Sbjct: 123 RSSCGFTHHHFLSIGGILCFLHALFCVAYYVSATAAK 159

[Close]

BLAST of Clc02G08580 vs. TAIR 10
Match: AT4G21310.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 214.5 bits (545), Expect = 6.0e-56
Identity = 99/154 (64.29%), Postives = 126/154 (81.82%), Query Frame = 0


Query: 4   VGVLICLLVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGL 63
           VG  IC+L++AMD+ AG+LGIEA+IAQNKVKHL++WIFECRDPS  AFK GL A  LL L
Sbjct: 5   VGFFICILILAMDVSAGILGIEAEIAQNKVKHLKMWIFECRDPSYTAFKYGLAACILLVL 64

Query: 64  AHIIANLLGGCNCICSQEELQKSPPNKQISIACLIFTWIILAVGMSMLVIGALGNNKSRA 123
           AH+ AN LGGC C+ S+++L+KS  NKQ+++A LIFTWIILA+  SML++G + N++SR 
Sbjct: 65  AHVTANFLGGCLCVASRQDLEKSSANKQLAVASLIFTWIILAIAFSMLIVGTMANSRSRK 124

Query: 124 TCGFTHHHFLSIGGILCFVHGLFCVAYYVTTTAA 158
            CG +HH  LSIGGILCFVHGLF VAYY++ TA+
Sbjct: 125 NCGISHHRVLSIGGILCFVHGLFAVAYYISATAS 158

[Close]

BLAST of Clc02G08580 vs. TAIR 10
Match: AT1G11500.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 117.1 bits (292), Expect = 1.3e-26
Identity = 64/162 (39.51%), Postives = 98/162 (60.49%), Query Frame = 0


Query: 4   VGVLICLLVVAMDIVAGLLGIEADIAQNKV------KHLRLWIFEC-RDPSEQAFKLGLG 63
           +G L+ ++++  DI A +LGIEA+IAQ+K       +H R     C R PS+ AF  G+ 
Sbjct: 5   LGFLVSVVIICADITATVLGIEAEIAQSKAPHHHHQQHSRHSGSGCRRSPSDGAFAEGVA 64

Query: 64  AAGLLGLAHIIANLLGGCNCICSQEELQKSPPNKQISIACLIFTWIILAVGMSMLVIGAL 123
           A  LL + H++AN+LGGC  I S+++ +++  NK +++A L+ +WI   V  S L+IG L
Sbjct: 65  AMVLLFIVHVLANVLGGCTYIRSKQDFKRATANKILAVAFLVLSWIFFVVSYSTLMIGTL 124

Query: 124 GNNKSRATCGFTHHHFLSIGGILCFVHGLFCVAYYVTTTAAE 159
            N+++   C   H  F  IGGI C  HG+   AYYV+  AA+
Sbjct: 125 ANSRTNRLCSLPHRWFFLIGGIFCLGHGVVTSAYYVSAIAAK 166

[Close]

BLAST of Clc02G08580 vs. TAIR 10
Match: AT1G05291.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 103.6 bits (257), Expect = 1.5e-22
Identity = 60/156 (38.46%), Postives = 91/156 (58.33%), Query Frame = 0


Query: 6   VLICL-LVVAMDIVAGLLGIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLA 65
           +++C+ L V +DIVAG +G++A  AQ  VKH +L   EC+ PS+ AF LG+ A   L  A
Sbjct: 17  IIVCIVLTVGLDIVAGFVGLQAQAAQQYVKHDKL---ECKAPSKTAFVLGIIAVSCLATA 76

Query: 66  HIIANLLGGCNCICSQEELQKSPPNK---QISIACLIFTWIILAVGMSMLVIGALGNNKS 125
           H+ AN++ GC+     + L   P NK     ++ACL   W++   G  +L  G   N +S
Sbjct: 77  HVSANVI-GCSISNLFQALGALPKNKITTYFNMACLFLIWVVGIFGALILANGIWSNTES 136

Query: 126 RATCGFTHHHFLSIGGILCFVHGLFCVAYYVTTTAA 158
           R  C FT++H  SIGG +CF+H +    YY+++  A
Sbjct: 137 RIRCRFTNNHVFSIGGKVCFLHAIVSGIYYISSIVA 168

The following BLAST results are available for this feature:

BLAST of Clc02G08580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902419.1	1.5e-80	96.84	uncharacterized protein LOC120089064 [Benincasa hispida]	[more]
XP_004151872.1	4.3e-80	96.20	uncharacterized protein LOC101212188 [Cucumis sativus] >KGN63282.1 hypothetical ...	[more]
XP_008455827.1	5.6e-80	95.57	PREDICTED: uncharacterized protein LOC103495927 [Cucumis melo]	[more]
XP_022944616.1	4.9e-76	91.14	uncharacterized protein LOC111449022 [Cucurbita moschata]	[more]
XP_023512382.1	6.4e-76	90.51	uncharacterized protein LOC111777151 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc02G08580 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc02G08580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LR43	2.1e-80	96.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G423620 PE=4 SV=1	[more]
A0A1S3C1S7	2.7e-80	95.57	uncharacterized protein LOC103495927 OS=Cucumis melo OX=3656 GN=LOC103495927 PE=...	[more]
A0A6J1FUW3	2.4e-76	91.14	uncharacterized protein LOC111449022 OS=Cucurbita moschata OX=3662 GN=LOC1114490...	[more]
A0A6J1CID0	2.0e-75	90.51	uncharacterized protein LOC111011214 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1JAZ6	1.7e-74	89.87	uncharacterized protein LOC111484145 OS=Cucurbita maxima OX=3661 GN=LOC111484145...	[more]

BLAST of Clc02G08580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32280.1	1.1e-60	63.06	Protein of unknown function (DUF1218)	[more]
AT4G21310.1	6.0e-56	64.29	Protein of unknown function (DUF1218)	[more]
AT1G11500.1	1.3e-26	39.51	Protein of unknown function (DUF1218)	[more]
AT1G05291.1	1.5e-22	38.46	Protein of unknown function (DUF1218)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Modifying wall lignin-1/2	PFAM	PF06749	DUF1218	coord: 57..144 e-value: 2.2E-19 score: 69.7
None	No IPR available	PANTHER	PTHR31769	OS07G0462200 PROTEIN-RELATED	coord: 2..157
None	No IPR available	PANTHER	PTHR31769:SF54	BNAA05G10770D PROTEIN	coord: 2..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G08580.1	Clc02G08580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010588	cotyledon vascular tissue pattern formation
biological_process	GO:0009855	determination of bilateral symmetry
biological_process	GO:0010305	leaf vascular tissue pattern formation
biological_process	GO:0010087	phloem or xylem histogenesis
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane