Homology
BLAST of Clc02G07960 vs. NCBI nr
Match:
XP_038900459.1 (pentatricopeptide repeat-containing protein At5g27270 [Benincasa hispida])
HSP 1 Score: 1968.0 bits (5097), Expect = 0.0e+00
Identity = 1006/1070 (94.02%), Postives = 1033/1070 (96.54%), Query Frame = 0
Query: 143 MESLKTSFLSPILLPPPSNRSTRCQLKSRNAQIFIISSSVTPDPWSLSDGNPARPKPRSK 202
MESLKTSFLSPI LP PSNRSTR LKS+NAQIFII SSVTPDPWSLSDGNPARPKPRSK
Sbjct: 1 MESLKTSFLSPIHLPSPSNRSTRYSLKSKNAQIFIIRSSVTPDPWSLSDGNPARPKPRSK 60
Query: 203 NAKKPLSDDNARRIIRAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 262
NAKKPLSDDNARRII+AKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG
Sbjct: 61 NAKKPLSDDNARRIIKAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 120
Query: 263 KHVVAAIRHVRSLSQKTEGDYDMRMEMASFVGKLTFREMCIVLKEQKGWRQVRDVFDWMK 322
KHVVAAIRHVRSLSQKT+G+YDMRMEMASFVGKLTFREMCIVLKEQKGWRQVRDVFDWMK
Sbjct: 121 KHVVAAIRHVRSLSQKTKGEYDMRMEMASFVGKLTFREMCIVLKEQKGWRQVRDVFDWMK 180
Query: 323 LQLSYRPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 382
LQLSYRPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH
Sbjct: 181 LQLSYRPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 240
Query: 383 KAMLSFYSAVKDRGIIPSIAVFNFMLSSLQKKGLHAKVKELWMQMVEIRVTFNEFTYTVV 442
KAMLSFYSAVKDRGII SIAVFNFMLSSLQKKGLHAKVKELWMQMVEI VTFN+FTYTVV
Sbjct: 241 KAMLSFYSAVKDRGIIHSIAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV 300
Query: 443 INSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGDSDEVFRLYKDMRDKDI 502
INSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRG+SDEV RLYKDMRDKDI
Sbjct: 301 INSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI 360
Query: 503 VPSNYTCSSLLTLFYKNGDYSNALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAQK 562
VPSNYTCSSLLTLFYKNGD+S ALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDA K
Sbjct: 361 VPSNYTCSSLLTLFYKNGDFSKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK 420
Query: 563 TFEEMEQLSLLTDEKSYLAMAQVHLNSRNFEKALNIIDLMKSRNIWLSRFAYIVSLQCYV 622
TFEEMEQL LLTDEKSYLAMAQVHL+SRNFEKAL+II+LMKSRNIWLSRFAYIVSLQCYV
Sbjct: 421 TFEEMEQLGLLTDEKSYLAMAQVHLSSRNFEKALDIIELMKSRNIWLSRFAYIVSLQCYV 480
Query: 623 MKEDIRSAESTFQALSKTGLPDARSCINILNLYLKLDLVNKAKDFIAHIRKDGVAFDEEL 682
MKEDIRSAESTFQALSKTGLPDARSCI ILNLYLKLDLVNKAKDFIAHIRKDGV FDEEL
Sbjct: 481 MKEDIRSAESTFQALSKTGLPDARSCIYILNLYLKLDLVNKAKDFIAHIRKDGVVFDEEL 540
Query: 683 YKLVMRVYCKEGLSTDAESLIELMKKDELFVDNKFMETFSFMFKLDGGEINENTIVSYDQ 742
YKLVMRVYCKEGLS DAE LIELMKKDELFVDNKFMETFSFMFKLDGGEINENTIVSYDQ
Sbjct: 541 YKLVMRVYCKEGLSKDAEILIELMKKDELFVDNKFMETFSFMFKLDGGEINENTIVSYDQ 600
Query: 743 VDHLALDMILRLYLANGDVGKRNKILKLILGKGGMTIVSQLVANLIREGKKMTLFICDAL 802
DH+ALDMILRLYLANGD GKR+KILK ILGKGG+T+VSQLVANLIREG D+L
Sbjct: 601 PDHMALDMILRLYLANGDAGKRSKILKFILGKGGVTVVSQLVANLIREG--------DSL 660
Query: 803 KAGTLTKELLMLDCQLDDATIASLISLYGKDKKINQAAEILAAVAASCTSTLIFSSMIDA 862
KAG LTKELL LDC+LDDATIASLISLYGK+KKINQAAEILAAVA SCTSTLIF SMIDA
Sbjct: 661 KAGMLTKELLKLDCRLDDATIASLISLYGKEKKINQAAEILAAVADSCTSTLIFGSMIDA 720
Query: 863 YIKCDKAEEAFTLYKELIEKGYDLGAVAVSRAVNTLTVGGKHQVAENVIRASLNCGLELD 922
YIKCDKAEEAFTLYKELIEKGYDLGAVAVSR VNTLTVGGKH+VAENVIRASLNCGLELD
Sbjct: 721 YIKCDKAEEAFTLYKELIEKGYDLGAVAVSRIVNTLTVGGKHRVAENVIRASLNCGLELD 780
Query: 923 TVAFNTFIKAMLEAGKLHFASRIYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAVGMFN 982
TVAFNTFIKAMLEAGKLHFASRIYEHMIALG+VPSIQTYNTMISVYGRGRKLDKAV MFN
Sbjct: 781 TVAFNTFIKAMLEAGKLHFASRIYEHMIALGVVPSIQTYNTMISVYGRGRKLDKAVEMFN 840
Query: 983 AARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLDEGIKPGMVSYNIMVNVYANAG 1042
AARSSGLSPDEKAYTNLI+CYGKAGKTHEASLLFKEML+EGIKPGMVSYNIMVNVYANAG
Sbjct: 841 AARSSGLSPDEKAYTNLINCYGKAGKTHEASLLFKEMLEEGIKPGMVSYNIMVNVYANAG 900
Query: 1043 LHEETEKLFKAMEQDGFLLDSFTYFSLIRAYTQSCKYSEAEKIINSMQEKGIPTSCAHYD 1102
LHEETEK+FKA+EQDGF DSFTYFSLIRAYTQSCKYSEAEKIINSMQEKGIPTSCAHYD
Sbjct: 901 LHEETEKVFKAIEQDGFSPDSFTYFSLIRAYTQSCKYSEAEKIINSMQEKGIPTSCAHYD 960
Query: 1103 LLLSALAKAGMIRKAERVYDELQTAGLNPDVTCNRTLMRGYLDYGYVKEGIKFFESTCKY 1162
LLLSALAKAGMIRKAERVYDELQTAGL PDVTCNRTLMRGYLDYGYVKEGIKFFESTCKY
Sbjct: 961 LLLSALAKAGMIRKAERVYDELQTAGLYPDVTCNRTLMRGYLDYGYVKEGIKFFESTCKY 1020
Query: 1163 TGDRFIMSAAVHFYKVEGREDEALNILNSMKALGISFLKDLRVGSKLESA 1213
GDRFIMSAAVHFYKVEG+EDEALNIL+SMK LGISFLKDL+VGSK+ESA
Sbjct: 1021 AGDRFIMSAAVHFYKVEGKEDEALNILDSMKTLGISFLKDLQVGSKVESA 1062
BLAST of Clc02G07960 vs. NCBI nr
Match:
XP_004140061.1 (pentatricopeptide repeat-containing protein At5g27270 [Cucumis sativus] >KGN46657.1 hypothetical protein Csa_005270 [Cucumis sativus])
HSP 1 Score: 1935.6 bits (5013), Expect = 0.0e+00
Identity = 985/1070 (92.06%), Postives = 1020/1070 (95.33%), Query Frame = 0
Query: 143 MESLKTSFLSPILLPPPSNRSTRCQLKSRNAQIFIISSSVTPDPWSLSDGNPARPKPRSK 202
MESLKTSFLSPILLPPP R+TR LKSRNAQIFII SVTPDPWSLSDGNPARPKPRSK
Sbjct: 1 MESLKTSFLSPILLPPPFIRTTRSPLKSRNAQIFIIRLSVTPDPWSLSDGNPARPKPRSK 60
Query: 203 NAKKPLSDDNARRIIRAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 262
NAKKPLSDDNARRII+AKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG
Sbjct: 61 NAKKPLSDDNARRIIKAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 120
Query: 263 KHVVAAIRHVRSLSQKTEGDYDMRMEMASFVGKLTFREMCIVLKEQKGWRQVRDVFDWMK 322
KHVVAAIRHVRSLSQKTEG+Y+MRMEMASFV KLTFREMCIVLKEQKGWRQVRDVFDWMK
Sbjct: 121 KHVVAAIRHVRSLSQKTEGEYNMRMEMASFVEKLTFREMCIVLKEQKGWRQVRDVFDWMK 180
Query: 323 LQLSYRPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 382
LQLSYRPSVIVYTIVLR YGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH
Sbjct: 181 LQLSYRPSVIVYTIVLRAYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 240
Query: 383 KAMLSFYSAVKDRGIIPSIAVFNFMLSSLQKKGLHAKVKELWMQMVEIRVTFNEFTYTVV 442
K MLSFYSAVKDRGI+P IAVFNFMLSSLQKKGLHAKVKELWMQMVEI VTF++FTYTVV
Sbjct: 241 KTMLSFYSAVKDRGIVPPIAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFSDFTYTVV 300
Query: 443 INSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGDSDEVFRLYKDMRDKDI 502
INSLVKEGHSEEAFKVFNEMKNCGF+PEEVTYNLLISLSIKR +SDEV RLYKDMRDKDI
Sbjct: 301 INSLVKEGHSEEAFKVFNEMKNCGFIPEEVTYNLLISLSIKRENSDEVLRLYKDMRDKDI 360
Query: 503 VPSNYTCSSLLTLFYKNGDYSNALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAQK 562
VPSNYTCSSLLTLFYKNGDYS ALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDA K
Sbjct: 361 VPSNYTCSSLLTLFYKNGDYSKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK 420
Query: 563 TFEEMEQLSLLTDEKSYLAMAQVHLNSRNFEKALNIIDLMKSRNIWLSRFAYIVSLQCYV 622
TFEEMEQL LLTDEKSYLAMAQVHLNSRNFEKAL+II+LMKSRNIWLSRFAYIVSLQCYV
Sbjct: 421 TFEEMEQLGLLTDEKSYLAMAQVHLNSRNFEKALDIIELMKSRNIWLSRFAYIVSLQCYV 480
Query: 623 MKEDIRSAESTFQALSKTGLPDARSCINILNLYLKLDLVNKAKDFIAHIRKDGVAFDEEL 682
MKEDIRSAESTFQALSKTGLPDARSCI ILNLYLKLDLVNKAKDFIAHIRKDGV FDEEL
Sbjct: 481 MKEDIRSAESTFQALSKTGLPDARSCIYILNLYLKLDLVNKAKDFIAHIRKDGVVFDEEL 540
Query: 683 YKLVMRVYCKEGLSTDAESLIELMKKDELFVDNKFMETFSFMFKLDGGEINENTIVSYDQ 742
YKLV+RVYCKEGLS DAE LIELMKKDELFVDNKFMETFSFMFKLDGGE NE+TIV YDQ
Sbjct: 541 YKLVLRVYCKEGLSEDAEILIELMKKDELFVDNKFMETFSFMFKLDGGEKNESTIVGYDQ 600
Query: 743 VDHLALDMILRLYLANGDVGKRNKILKLILGKGGMTIVSQLVANLIREGKKMTLFICDAL 802
DH+ALDMILRLYLANGDV KRNKILK I+GKGG+T+VSQLVANLIREG D+L
Sbjct: 601 PDHIALDMILRLYLANGDVSKRNKILKFIIGKGGVTVVSQLVANLIREG--------DSL 660
Query: 803 KAGTLTKELLMLDCQLDDATIASLISLYGKDKKINQAAEILAAVAASCTSTLIFSSMIDA 862
KAGTLTKELL LDC+LDDA IASLISLYGK++KINQAAE+LAAVA SCTSTLIF SMIDA
Sbjct: 661 KAGTLTKELLKLDCRLDDAIIASLISLYGKERKINQAAEVLAAVANSCTSTLIFGSMIDA 720
Query: 863 YIKCDKAEEAFTLYKELIEKGYDLGAVAVSRAVNTLTVGGKHQVAENVIRASLNCGLELD 922
YIKCDKAEEA TLYKELIEKGYDLGAVAVSR VNTLTVGGKH+VAENV+RASLNCGLELD
Sbjct: 721 YIKCDKAEEASTLYKELIEKGYDLGAVAVSRIVNTLTVGGKHRVAENVVRASLNCGLELD 780
Query: 923 TVAFNTFIKAMLEAGKLHFASRIYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAVGMFN 982
TVAFNTFIKAMLE GKLHFASRIYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAV MFN
Sbjct: 781 TVAFNTFIKAMLEGGKLHFASRIYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAVEMFN 840
Query: 983 AARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLDEGIKPGMVSYNIMVNVYANAG 1042
AARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEML+EG+KPGMVSYNIMVNVYANAG
Sbjct: 841 AARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPGMVSYNIMVNVYANAG 900
Query: 1043 LHEETEKLFKAMEQDGFLLDSFTYFSLIRAYTQSCKYSEAEKIINSMQEKGIPTSCAHYD 1102
LHEETE L KAMEQD + DSFTYFSLIRAYTQSCKYSEAEKIINSMQEKGIPT+CAHYD
Sbjct: 901 LHEETENLLKAMEQDAIVPDSFTYFSLIRAYTQSCKYSEAEKIINSMQEKGIPTTCAHYD 960
Query: 1103 LLLSALAKAGMIRKAERVYDELQTAGLNPDVTCNRTLMRGYLDYGYVKEGIKFFESTCKY 1162
LLLSALAKAGMIRKAERVYDELQTAGL+PDVTCNRTLMRGYLDYGYV+EGIKFFESTCKY
Sbjct: 961 LLLSALAKAGMIRKAERVYDELQTAGLSPDVTCNRTLMRGYLDYGYVREGIKFFESTCKY 1020
Query: 1163 TGDRFIMSAAVHFYKVEGREDEALNILNSMKALGISFLKDLRVGSKLESA 1213
GDRFIMSAAVHFYK EG+EDEALNIL+SMK LG+SFLKDL++G KLESA
Sbjct: 1021 AGDRFIMSAAVHFYKAEGKEDEALNILDSMKTLGLSFLKDLQIGLKLESA 1062
BLAST of Clc02G07960 vs. NCBI nr
Match:
XP_008462786.1 (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g27270 [Cucumis melo])
HSP 1 Score: 1926.4 bits (4989), Expect = 0.0e+00
Identity = 983/1070 (91.87%), Postives = 1018/1070 (95.14%), Query Frame = 0
Query: 143 MESLKTSFLSPILLPPPSNRSTRCQLKSRNAQIFIISSSVTPDPWSLSDGNPARPKPRSK 202
MESLKTSFLSPILLPPPS R+TR LK +NA+IFII SVTPDPWSLSDGNPARPKPRSK
Sbjct: 1 MESLKTSFLSPILLPPPSIRTTRSPLKYKNAEIFIIRLSVTPDPWSLSDGNPARPKPRSK 60
Query: 203 NAKKPLSDDNARRIIRAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 262
NAK+PLSDDNARRII+AKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG
Sbjct: 61 NAKRPLSDDNARRIIKAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 120
Query: 263 KHVVAAIRHVRSLSQKTEGDYDMRMEMASFVGKLTFREMCIVLKEQKGWRQVRDVFDWMK 322
KHVVAAIRHVRSLSQKTEG+YDMRMEMASFV KLTFREMCIVLKEQKGWRQVRDVFDWMK
Sbjct: 121 KHVVAAIRHVRSLSQKTEGEYDMRMEMASFVEKLTFREMCIVLKEQKGWRQVRDVFDWMK 180
Query: 323 LQLSYRPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 382
LQLSYRPSVIVYTIVLR YGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH
Sbjct: 181 LQLSYRPSVIVYTIVLRAYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 240
Query: 383 KAMLSFYSAVKDRGIIPSIAVFNFMLSSLQKKGLHAKVKELWMQMVEIRVTFNEFTYTVV 442
KAMLSFYSAVKDRGIIP IAVFNFMLSSLQKKGLHAKVKELWMQMVEI VTFN+FTYTVV
Sbjct: 241 KAMLSFYSAVKDRGIIPPIAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV 300
Query: 443 INSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGDSDEVFRLYKDMRDKDI 502
INSLVKEGHSEEAF+VFNEMKNCGFVPEEVTYNLLISLSIKRG+SDEV RLYKDMRDKDI
Sbjct: 301 INSLVKEGHSEEAFEVFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI 360
Query: 503 VPSNYTCSSLLTLFYKNGDYSNALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAQK 562
VPSNYTCSSLLTLFYKNGDY ALSLFSEME+KKVVVDEVIYGLLIRIYGKLGLYEDA K
Sbjct: 361 VPSNYTCSSLLTLFYKNGDYPKALSLFSEMEAKKVVVDEVIYGLLIRIYGKLGLYEDAHK 420
Query: 563 TFEEMEQLSLLTDEKSYLAMAQVHLNSRNFEKALNIIDLMKSRNIWLSRFAYIVSLQCYV 622
TFEEMEQL LLTDEKSYLAMAQVHLNSRNFEKAL+II+LMKSRNIWLSRFAYIVSLQCYV
Sbjct: 421 TFEEMEQLGLLTDEKSYLAMAQVHLNSRNFEKALDIIELMKSRNIWLSRFAYIVSLQCYV 480
Query: 623 MKEDIRSAESTFQALSKTGLPDARSCINILNLYLKLDLVNKAKDFIAHIRKDGVAFDEEL 682
MKEDIRS ESTFQALSKTGLPDARSCI ILNLYLKLDL+NKAK+FIAHIRKDGV FDEEL
Sbjct: 481 MKEDIRSTESTFQALSKTGLPDARSCIYILNLYLKLDLMNKAKEFIAHIRKDGVVFDEEL 540
Query: 683 YKLVMRVYCKEGLSTDAESLIELMKKDELFVDNKFMETFSFMFKLDGGEINENTIVSYDQ 742
YKLVMRVYCKEGLS DAE LIELMKKDELFVDNKFMETFSFMFKLDGGE NE+TIV YDQ
Sbjct: 541 YKLVMRVYCKEGLSKDAEILIELMKKDELFVDNKFMETFSFMFKLDGGEKNESTIVGYDQ 600
Query: 743 VDHLALDMILRLYLANGDVGKRNKILKLILGKGGMTIVSQLVANLIREGKKMTLFICDAL 802
DH+ALDMILRLYLANGDV KR+KILK ILGKGG+T+VSQLVANLIREG D+L
Sbjct: 601 PDHIALDMILRLYLANGDVSKRSKILKFILGKGGVTVVSQLVANLIREG--------DSL 660
Query: 803 KAGTLTKELLMLDCQLDDATIASLISLYGKDKKINQAAEILAAVAASCTSTLIFSSMIDA 862
KAGTLTKELL LDC+LDDATIASLISL+GK+KKINQAAEILAAVA SC STLIF SMIDA
Sbjct: 661 KAGTLTKELLKLDCRLDDATIASLISLFGKEKKINQAAEILAAVAVSCKSTLIFGSMIDA 720
Query: 863 YIKCDKAEEAFTLYKELIEKGYDLGAVAVSRAVNTLTVGGKHQVAENVIRASLNCGLELD 922
YIKCDKAEEAFTLYKELI KGYDLGAVAVSR VNTLTVGGKH+VAENVIRASLNCGLELD
Sbjct: 721 YIKCDKAEEAFTLYKELIGKGYDLGAVAVSRIVNTLTVGGKHRVAENVIRASLNCGLELD 780
Query: 923 TVAFNTFIKAMLEAGKLHFASRIYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAVGMFN 982
TVAFNTFIKAMLE GKLHFASRIYEHMIALG+VPSIQTYNTMISVYGRGRKLDKAV MFN
Sbjct: 781 TVAFNTFIKAMLEGGKLHFASRIYEHMIALGVVPSIQTYNTMISVYGRGRKLDKAVEMFN 840
Query: 983 AARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLDEGIKPGMVSYNIMVNVYANAG 1042
AARSSGLSPDEKAYTNLIS YGKAGKTHEASLLFKEML+EG+KPGMVSYNIMVNVYANAG
Sbjct: 841 AARSSGLSPDEKAYTNLISYYGKAGKTHEASLLFKEMLEEGVKPGMVSYNIMVNVYANAG 900
Query: 1043 LHEETEKLFKAMEQDGFLLDSFTYFSLIRAYTQSCKYSEAEKIINSMQEKGIPTSCAHYD 1102
LHEETE LFK MEQD L DSFTYFSLIRAYTQS KYSEAEK+INSMQEKGIPTSCAHYD
Sbjct: 901 LHEETENLFKVMEQDSVLPDSFTYFSLIRAYTQSGKYSEAEKVINSMQEKGIPTSCAHYD 960
Query: 1103 LLLSALAKAGMIRKAERVYDELQTAGLNPDVTCNRTLMRGYLDYGYVKEGIKFFESTCKY 1162
LLLSALAKAGMIRKAERVYDELQTAGL+PDVTCNRTLMRGYLDYGYV+EGI+FFESTCKY
Sbjct: 961 LLLSALAKAGMIRKAERVYDELQTAGLSPDVTCNRTLMRGYLDYGYVREGIEFFESTCKY 1020
Query: 1163 TGDRFIMSAAVHFYKVEGREDEALNILNSMKALGISFLKDLRVGSKLESA 1213
GDRFIMSAAVHFYK EG+EDEALNIL+SMK LGISFLKDL++G KLESA
Sbjct: 1021 AGDRFIMSAAVHFYKAEGKEDEALNILDSMKTLGISFLKDLQIGLKLESA 1062
BLAST of Clc02G07960 vs. NCBI nr
Match:
KAA0042408.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1877.4 bits (4862), Expect = 0.0e+00
Identity = 971/1113 (87.24%), Postives = 1005/1113 (90.30%), Query Frame = 0
Query: 143 MESLKTSFLSPILLPPPSNRSTRCQLKSRNAQIFIISSSVTPDPWSLSDGNPARPKPRSK 202
MESLKTSFLSPILLPPPS R+TR LK +NA+IFII SVTPDPWSLSDGNPARPKPRSK
Sbjct: 1 MESLKTSFLSPILLPPPSIRTTRSPLKYKNAEIFIIRLSVTPDPWSLSDGNPARPKPRSK 60
Query: 203 NAKKPLSDDNARRIIRAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 262
NAK+PLSDDNARRII+AKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG
Sbjct: 61 NAKRPLSDDNARRIIKAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 120
Query: 263 KHVVAAIRHVRSLSQKTEGDYDMRMEMASFVGKLTFREMCIVLKEQKGWRQVRDVFDWMK 322
KHVVAAIRHVRSLSQKTEG+YDMRMEMASFV KLTFREMCIVLKEQKGWRQVRDVFDWMK
Sbjct: 121 KHVVAAIRHVRSLSQKTEGEYDMRMEMASFVEKLTFREMCIVLKEQKGWRQVRDVFDWMK 180
Query: 323 LQLSYRPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 382
LQLSYRPSVIVYTIVLR YGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH
Sbjct: 181 LQLSYRPSVIVYTIVLRAYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 240
Query: 383 KAMLSFYSAVKDRGIIPSIAVFNFMLSSLQKKGLHAKVKELWMQMVEIRVTFNEFTYTVV 442
KAMLSFYSAVKDRGIIP IAVFNFMLSSLQKKGLHAKVKELWMQMVEI VTFN+FTYTVV
Sbjct: 241 KAMLSFYSAVKDRGIIPPIAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV 300
Query: 443 INSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGDSDEVFRLYKDMRDKDI 502
INSLVKEGHSEEAF+VFNEMKNCGFVPEEVTYNLLISLSIKRG+SDEV RLYKDMRDKDI
Sbjct: 301 INSLVKEGHSEEAFEVFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI 360
Query: 503 VPSNYTCSSLLTLFYKNGDYSNALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAQK 562
VPSNYTCSSLLTLFYKNGDY ALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDA K
Sbjct: 361 VPSNYTCSSLLTLFYKNGDYPKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK 420
Query: 563 TFEEMEQLSLLTDEKSYLAMAQVHLNSRNFEKALNIIDLMKSRNIWLSRFAYIVSLQCYV 622
TFEEMEQL LLTDEKSYLAMAQVHLNSRNFEKAL+II+LMKSRNIWLSRFAYIVSLQCYV
Sbjct: 421 TFEEMEQLGLLTDEKSYLAMAQVHLNSRNFEKALDIIELMKSRNIWLSRFAYIVSLQCYV 480
Query: 623 MKEDIRSAESTFQALSKTGLPDARSCINILNLYLKLDLVNKAKDFIAHIRKDGVAFDEEL 682
MKEDIRS ESTFQALSKTGLPDA+ FIAHIRKDGV FDEEL
Sbjct: 481 MKEDIRSTESTFQALSKTGLPDAQ--------------------FIAHIRKDGVVFDEEL 540
Query: 683 YKLVMRVYCKEGLSTDAESLIELMKKDELFVDNKFMETFSFMFKLDGGEINENTIVSYDQ 742
YKLVMRVYCKEGLS DAE LIELMKKDELFVDNKFMETFSFMFKLDGGE NE+TIV YDQ
Sbjct: 541 YKLVMRVYCKEGLSKDAEILIELMKKDELFVDNKFMETFSFMFKLDGGEKNESTIVGYDQ 600
Query: 743 VDHLALDMILRLYLANGDVGKRNKILKLILGKGGMTIVSQLVANLIREGKKMTLFICDAL 802
DH+ALDMILRLYLANGDV KR+KILK ILGKGG+T+VSQLVANLIREGKK+T F CD+L
Sbjct: 601 PDHIALDMILRLYLANGDVSKRSKILKFILGKGGVTVVSQLVANLIREGKKITHFFCDSL 660
Query: 803 KAGTLTKELLMLDCQLDDATIASLISLYGKDKKINQAAEILAAVAASCTSTLIFSSMIDA 862
KAGTLTKELL LDC+LDDATIASLISL+GK+KKINQAAEILAAVA SC STLIF SMIDA
Sbjct: 661 KAGTLTKELLKLDCRLDDATIASLISLFGKEKKINQAAEILAAVAVSCKSTLIFGSMIDA 720
Query: 863 YIKCDKAEEAFTLYKELIEKGYDLGAVAVSRAVNTLTVG--------------------- 922
YIKCDKAEEAFTLYKELI KGYDLGAVAVSR VNTLTVG
Sbjct: 721 YIKCDKAEEAFTLYKELIGKGYDLGAVAVSRIVNTLTVGAQTVFLNIRRLKKKEKLRLEL 780
Query: 923 ----------------------GKHQVAENVIRASLNCGLELDTVAFNTFIKAMLEAGKL 982
GKH+VAENVIRASLNCGLELDTVAFNTFIKAMLE GKL
Sbjct: 781 SVRLNADWLGGIDSSSQPIPSSGKHRVAENVIRASLNCGLELDTVAFNTFIKAMLEGGKL 840
Query: 983 HFASRIYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAVGMFNAARSSGLSPDEKAYTNL 1042
HFASRIYEHMIALG+VPSIQTYNTMISVYGRGRKLDKAV MFNAARSSGLSPDEKAYTNL
Sbjct: 841 HFASRIYEHMIALGVVPSIQTYNTMISVYGRGRKLDKAVEMFNAARSSGLSPDEKAYTNL 900
Query: 1043 ISCYGKAGKTHEASLLFKEMLDEGIKPGMVSYNIMVNVYANAGLHEETEKLFKAMEQDGF 1102
IS YGKAGKTHEASLLFKEML+EG+KPGMVSYNIMVNVYANAGLHEETE LFK MEQD
Sbjct: 901 ISYYGKAGKTHEASLLFKEMLEEGVKPGMVSYNIMVNVYANAGLHEETENLFKVMEQDSV 960
Query: 1103 LLDSFTYFSLIRAYTQSCKYSEAEKIINSMQEKGIPTSCAHYDLLLSALAKAGMIRKAER 1162
L DSFTYFSLIRAYTQS KYSEAEK+INSMQEKGIPTSCAHYDLLLSALAKAGMIRKAER
Sbjct: 961 LPDSFTYFSLIRAYTQSGKYSEAEKVINSMQEKGIPTSCAHYDLLLSALAKAGMIRKAER 1020
Query: 1163 VYDELQTAGLNPDVTCNRTLMRGYLDYGYVKEGIKFFESTCKYTGDRFIMSAAVHFYKVE 1213
VYDELQTAGL+PDVTCNRTLMRGYLDYGYV+EGI+FFESTCKY GDRFIMSAAVHFYK E
Sbjct: 1021 VYDELQTAGLSPDVTCNRTLMRGYLDYGYVREGIEFFESTCKYAGDRFIMSAAVHFYKAE 1080
BLAST of Clc02G07960 vs. NCBI nr
Match:
TYK00992.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1875.5 bits (4857), Expect = 0.0e+00
Identity = 961/1070 (89.81%), Postives = 993/1070 (92.80%), Query Frame = 0
Query: 143 MESLKTSFLSPILLPPPSNRSTRCQLKSRNAQIFIISSSVTPDPWSLSDGNPARPKPRSK 202
MESLKTSFLSPILLPPPS R+TR LK +NA+IFII SVTPDPWSLSDGNPARPKPRSK
Sbjct: 1 MESLKTSFLSPILLPPPSIRTTRSPLKYKNAEIFIIRLSVTPDPWSLSDGNPARPKPRSK 60
Query: 203 NAKKPLSDDNARRIIRAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 262
NAK+PLSDDNARRII+AKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG
Sbjct: 61 NAKRPLSDDNARRIIKAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 120
Query: 263 KHVVAAIRHVRSLSQKTEGDYDMRMEMASFVGKLTFREMCIVLKEQKGWRQVRDVFDWMK 322
KHVVAAIRHVRSLSQKTEG+YDMRMEMASFV KLTFREMCIVLKEQKGWRQVRDVFDWMK
Sbjct: 121 KHVVAAIRHVRSLSQKTEGEYDMRMEMASFVEKLTFREMCIVLKEQKGWRQVRDVFDWMK 180
Query: 323 LQLSYRPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 382
LQLSYRPSVIVYTIVLR YGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH
Sbjct: 181 LQLSYRPSVIVYTIVLRAYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 240
Query: 383 KAMLSFYSAVKDRGIIPSIAVFNFMLSSLQKKGLHAKVKELWMQMVEIRVTFNEFTYTVV 442
KAMLSFYSAVKDRGIIP IAVFNFMLSSLQKKGLHAKVKELWMQMVEI VTFN+FTYTVV
Sbjct: 241 KAMLSFYSAVKDRGIIPPIAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV 300
Query: 443 INSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGDSDEVFRLYKDMRDKDI 502
INSLVKEGHSEEAF+VFNEMKNCGFVPEEVTYNLLISLSIKRG+SDEV RLYKDMRDKDI
Sbjct: 301 INSLVKEGHSEEAFEVFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI 360
Query: 503 VPSNYTCSSLLTLFYKNGDYSNALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAQK 562
VPSNYTCSSLLTLFYKNGDY ALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDA K
Sbjct: 361 VPSNYTCSSLLTLFYKNGDYPKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK 420
Query: 563 TFEEMEQLSLLTDEKSYLAMAQVHLNSRNFEKALNIIDLMKSRNIWLSRFAYIVSLQCYV 622
TFEEMEQL LLTDEKSYLAMAQVHLNSRNFEKAL+II+LMKSRNIWLSRFAYIVSLQCYV
Sbjct: 421 TFEEMEQLGLLTDEKSYLAMAQVHLNSRNFEKALDIIELMKSRNIWLSRFAYIVSLQCYV 480
Query: 623 MKEDIRSAESTFQALSKTGLPDARSCINILNLYLKLDLVNKAKDFIAHIRKDGVAFDEEL 682
MKEDIRS ESTFQALSKTGLPDARSCI ILNLYLKLDL+NKAK+FIAHIRKDGV FDEEL
Sbjct: 481 MKEDIRSTESTFQALSKTGLPDARSCIYILNLYLKLDLMNKAKEFIAHIRKDGVVFDEEL 540
Query: 683 YKLVMRVYCKEGLSTDAESLIELMKKDELFVDNKFMETFSFMFKLDGGEINENTIVSYDQ 742
YKLVMRVYCKEGLS DAE LIELMKKDELFVDNKFMETFSFMFKLDGGE NE+TIV YDQ
Sbjct: 541 YKLVMRVYCKEGLSKDAEILIELMKKDELFVDNKFMETFSFMFKLDGGEKNESTIVGYDQ 600
Query: 743 VDHLALDMILRLYLANGDVGKRNKILKLILGKGGMTIVSQLVANLIREGKKMTLFICDAL 802
DH+ALDMILRLYLANGDV KR+ D+L
Sbjct: 601 PDHIALDMILRLYLANGDVSKRS----------------------------------DSL 660
Query: 803 KAGTLTKELLMLDCQLDDATIASLISLYGKDKKINQAAEILAAVAASCTSTLIFSSMIDA 862
KAGTLTKELL LDC+LDDATIASLISL+GK+KKINQAAEILAAVA SC STLIF SMIDA
Sbjct: 661 KAGTLTKELLKLDCRLDDATIASLISLFGKEKKINQAAEILAAVAVSCKSTLIFGSMIDA 720
Query: 863 YIKCDKAEEAFTLYKELIEKGYDLGAVAVSRAVNTLTVGGKHQVAENVIRASLNCGLELD 922
YIKCDKAEEAFTLYKELI KGYDLGAVAVSR VNTLTVGGKH+VAENVIRASLNCGLELD
Sbjct: 721 YIKCDKAEEAFTLYKELIGKGYDLGAVAVSRIVNTLTVGGKHRVAENVIRASLNCGLELD 780
Query: 923 TVAFNTFIKAMLEAGKLHFASRIYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAVGMFN 982
TVAFNTFIKAMLE GKLHFASRIYEHMIALG+VPSIQTYNTMISVYGRGRKLDKAV MFN
Sbjct: 781 TVAFNTFIKAMLEGGKLHFASRIYEHMIALGVVPSIQTYNTMISVYGRGRKLDKAVEMFN 840
Query: 983 AARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLDEGIKPGMVSYNIMVNVYANAG 1042
AARSSGLSPDEKAYTNLIS YGKAGKTHEASLLFKEML+EG+KPGMVSYNIMVNVYANAG
Sbjct: 841 AARSSGLSPDEKAYTNLISYYGKAGKTHEASLLFKEMLEEGVKPGMVSYNIMVNVYANAG 900
Query: 1043 LHEETEKLFKAMEQDGFLLDSFTYFSLIRAYTQSCKYSEAEKIINSMQEKGIPTSCAHYD 1102
LHEETE LFK MEQD L DSFTYFSLIRAYTQS KYSEAEK+INSMQEKGIPTSCAHYD
Sbjct: 901 LHEETENLFKVMEQDSVLPDSFTYFSLIRAYTQSGKYSEAEKVINSMQEKGIPTSCAHYD 960
Query: 1103 LLLSALAKAGMIRKAERVYDELQTAGLNPDVTCNRTLMRGYLDYGYVKEGIKFFESTCKY 1162
LLLSALAKAGMIRKAERVYDELQTAGL+PDVTCNRTLMRGYLDYGYV+EGI+FFESTCKY
Sbjct: 961 LLLSALAKAGMIRKAERVYDELQTAGLSPDVTCNRTLMRGYLDYGYVREGIEFFESTCKY 1020
Query: 1163 TGDRFIMSAAVHFYKVEGREDEALNILNSMKALGISFLKDLRVGSKLESA 1213
GDRFIMSAAVHFYK EG+EDEALNIL+SMK LGISFLKDL++G KLESA
Sbjct: 1021 AGDRFIMSAAVHFYKAEGKEDEALNILDSMKTLGISFLKDLQIGLKLESA 1036
BLAST of Clc02G07960 vs. ExPASy Swiss-Prot
Match:
O04647 (Pentatricopeptide repeat-containing protein At5g27270 OS=Arabidopsis thaliana OX=3702 GN=EMB976 PE=2 SV=2)
HSP 1 Score: 1098.6 bits (2840), Expect = 0.0e+00
Identity = 573/1041 (55.04%), Postives = 744/1041 (71.47%), Query Frame = 0
Query: 148 TSFLSPILLPPPSNRSTRCQLKSRNAQIFIISSSVTPDPWSLSDGNPARPKPRSKNAKKP 207
T F I LP +R++R +KS ++ SS V PDPWSLSDGNP +PKPR + K P
Sbjct: 10 THFNPSIFLPKIPSRNSRISIKSSSS-----SSKVRPDPWSLSDGNPEKPKPRYERPKHP 69
Query: 208 LSDDNARRIIRAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYGKHVVA 267
LSDD+ARRII+ KAQYLS LRRNQG +A TPKWIKRTPEQMVQYLEDDRNG +YGKHVVA
Sbjct: 70 LSDDDARRIIKKKAQYLSTLRRNQGSQAMTPKWIKRTPEQMVQYLEDDRNGQMYGKHVVA 129
Query: 268 AIRHVRSLSQKTEGDYDMRMEMASFVGKLTFREMCIVLKEQKGWRQVRDVFDWMKLQLSY 327
AI+ VR LSQ+ +G DMR M+SFV KL+FR+MC+VLKEQ+GWRQVRD F WMKLQLSY
Sbjct: 130 AIKTVRGLSQRRQGSDDMRFVMSSFVAKLSFRDMCVVLKEQRGWRQVRDFFSWMKLQLSY 189
Query: 328 RPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHHKAMLS 387
RPSV+VYTIVLR YGQVGKIK+AEETFLEMLEVG EPD VACGTMLCTYARWG H AML+
Sbjct: 190 RPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLT 249
Query: 388 FYSAVKDRGIIPSIAVFNFMLSSLQKKGLHAKVKELWMQMVEIRVTFNEFTYTVVINSLV 447
FY AV++R I+ S +V+NFMLSSLQKK H KV +LW++MVE V NEFTYT+V++S
Sbjct: 250 FYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYA 309
Query: 448 KEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGDSDEVFRLYKDMRDKDIVPSNY 507
K+G EEA K F EMK+ GFVPEEVTY+ +ISLS+K GD ++ LY+DMR + IVPSNY
Sbjct: 310 KQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNY 369
Query: 508 TCSSLLTLFYKNGDYSNALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAQKTFEEM 567
TC+++L+L+YK +Y ALSLF++ME K+ DEVI GL+IRIYGKLGL+ DAQ FEE
Sbjct: 370 TCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEET 429
Query: 568 EQLSLLTDEKSYLAMAQVHLNSRNFEKALNIIDLMKSRNIWLSRFAYIVSLQCYVMKEDI 627
E+L+LL DEK+YLAM+QVHLNS N KAL++I++MK+R+I LSRFAYIV LQCY +++
Sbjct: 430 ERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNV 489
Query: 628 RSAESTFQALSKTGLPDARSCINILNLYLKLDLVNKAKDFIAHIRKDGVAFDEELYKLVM 687
AE F+ALSKTGLPDA SC ++LNLY +L+L KAK FI I D V FD ELYK M
Sbjct: 490 DCAEEAFRALSKTGLPDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAM 549
Query: 688 RVYCKEGLSTDAESLIELMKKDELFVDNKFMETFSFMFKLDGGEINENTIVSYDQVDHLA 747
RVYCKEG+ +A+ LI M ++ DN+F++T + + +++ Q+D +A
Sbjct: 550 RVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNVSQLDVMA 609
Query: 748 LDMILRLYLANGDVGKRNKILKLILGKG-GMTIVSQLVANLIREGKKMTLFICDALKAGT 807
L ++L L L G++ + IL L+ G + V++++++ +REG D KA
Sbjct: 610 LGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAVNRVISSFVREG--------DVSKAEM 669
Query: 808 LTKELLMLDCQLDDATIASLISLYGKDKKINQAAEI-LAAVAASCTSTLIFSSMIDAYIK 867
+ ++ L ++++ TIA+LI++YG+ K+ +A + LAA + + SMIDAY++
Sbjct: 670 IADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESKTPGKSVIRSMIDAYVR 729
Query: 868 CDKAEEAFTLYKELIEKGYDLGAVAVSRAVNTLTVGGKHQVAENVIRASLNCGLELDTVA 927
C E+A+ L+ E EKG D GAV +S VN LT GKH+ AE++ R L +ELDTV
Sbjct: 730 CGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVG 789
Query: 928 FNTFIKAMLEAGKLHFASRIYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAVGMFNAAR 987
+NT IKAMLEAGKL AS IYE M G+ SIQTYNTMISVYGRG +LDKA+ +F+ AR
Sbjct: 790 YNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNAR 849
Query: 988 SSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLDEGIKPGMVSYNIMVNVYANAGLHE 1047
SGL DEK YTN+I YGK GK EA LF EM +GIKPG SYN+MV + A + LH
Sbjct: 850 RSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHH 909
Query: 1048 ETEKLFKAMEQDGFLLDSFTYFSLIRAYTQSCKYSEAEKIINSMQEKGIPTSCAHYDLLL 1107
E ++L +AME++G D TY +LI+ Y +S +++EAEK I ++EKGIP S +H+ LL
Sbjct: 910 EVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLL 969
Query: 1108 SALAKAGMIRKAERVYDELQTAGLNPDVTCNRTLMRGYLDYGYVKEGIKFFESTCKYT-- 1167
SAL KAGM+ +AER Y ++ AG++PD C RT+++GY+ G ++GI F+E + +
Sbjct: 970 SALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVE 1029
Query: 1168 GDRFIMSAAVHFYKVEGREDE 1185
DRF+ S YK G+E +
Sbjct: 1030 DDRFVSSVVEDLYKAVGKEQD 1037
BLAST of Clc02G07960 vs. ExPASy Swiss-Prot
Match:
Q9SZ52 (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGR3 PE=1 SV=1)
HSP 1 Score: 192.2 bits (487), Expect = 3.4e-47
Identity = 185/815 (22.70%), Postives = 338/815 (41.47%), Query Frame = 0
Query: 329 PSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHHKAMLSF 388
P V+ YT+++ K+ A+E F +M +PD V T+L ++ ++ F
Sbjct: 291 PDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQF 350
Query: 389 YSAVKDRGIIPSIAVFNFMLSSLQKKGLHAKVKELWMQMVEIRVTFNEFTYTVVINSLVK 448
+S ++ G +P + F ++ +L K G + + M + + N TY +I L++
Sbjct: 351 WSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLR 410
Query: 449 EGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGDSDEVFRLYKDMRDKDIVPSNYT 508
++A ++F M++ G P TY + I K GDS ++ M+ K I P+
Sbjct: 411 VHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVA 470
Query: 509 CSSLLTLFYKNGDYSNALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAQKTFEEME 568
C++ L K G A +F ++ +V D V Y ++++ Y K+G ++A K EM
Sbjct: 471 CNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMM 530
Query: 569 QLSLLTDEKSYLAMAQVHLNSRNFEKALNIIDLMKSRNIWLSRFAYIVSLQCYVMKEDIR 628
+ D ++ + ++A + MK + + Y L I+
Sbjct: 531 ENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQ 590
Query: 629 SAESTFQALSKTGLPDARSCINIL-NLYLKLDLVNKAKDFIAHIRKDGVAFDEELYKLVM 688
A F+ + + G P N L + K D V A + + G D Y ++
Sbjct: 591 EAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII 650
Query: 689 RVYCKEGLSTDAESLIELMKK----DELFVDNKFMETFSFMFKLDGGEINENTIVS-YDQ 748
K G +A MKK D + + D +I N + + DQ
Sbjct: 651 FGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQ 710
Query: 749 VDHLALDMILRLYLANGDVGKRNKILKLILGKGGMTIVSQLVANLIREGKKMTLFICDAL 808
+L + ++ LA + + ++ G ++ +IR K +
Sbjct: 711 PANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHN----NVS 770
Query: 809 KAGTLTKELLM-LDCQLDDATIASLISLYGKDKKINQAAEILAAVAAS--CTSTLIFSSM 868
A TL ++ L Q T LI + I A ++ V ++ ++ +
Sbjct: 771 GARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFL 830
Query: 869 IDAYIKCDKAEEAFTLYKELIEKGYDLGAVAVSRAVNTLTVGGKHQVAENVIRASL-NCG 928
+DAY K K +E F LYKE+ + + + ++ L G A ++ + +
Sbjct: 831 LDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRD 890
Query: 929 LELDTVAFNTFIKAMLEAGKLHFASRIYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAV 988
+ I + ++G+L+ A +++E M+ G P+ YN +I+ +G+ + D A
Sbjct: 891 FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAAC 950
Query: 989 GMFNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLDEGIKPGMVSYNIMVNVY 1048
+F G+ PD K Y+ L+ C G+ E FKE+ + G+ P +V YN+++N
Sbjct: 951 ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGL 1010
Query: 1049 ANAGLHEETEKLFKAMEQD-GFLLDSFTYFSLIRAYTQSCKYSEAEKIINSMQEKGIPTS 1108
+ EE LF M+ G D +TY SLI + EA KI N +Q G+ +
Sbjct: 1011 GKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPN 1070
Query: 1109 CAHYDLLLSALAKAGMIRKAERVYDELQTAGLNPD 1133
++ L+ + +G A VY + T G +P+
Sbjct: 1071 VFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
BLAST of Clc02G07960 vs. ExPASy Swiss-Prot
Match:
Q9M907 (Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana OX=3702 GN=At3g06920 PE=2 SV=1)
HSP 1 Score: 187.2 bits (474), Expect = 1.1e-45
Identity = 169/719 (23.50%), Postives = 317/719 (44.09%), Query Frame = 0
Query: 447 VKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGDSDEVFRLYKDMRDKDIVPSN 506
VK E + V M+ F P Y LI SD + L++ M++ P+
Sbjct: 144 VKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTV 203
Query: 507 YTCSSLLTLFYKNGDYSNALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAQKTFEE 566
+ ++L+ F K G +ALSL EM+S + D V+Y + I +GK+G + A K F E
Sbjct: 204 HLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHE 263
Query: 567 MEQLSLLTDEKSYLAMAQVHLNSRNFEKALNIIDLMKSRNIWLSRFAYIVSLQCYVMKED 626
+E L DE +Y +M V + ++A+ + + ++ +AY + Y
Sbjct: 264 IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGK 323
Query: 627 IRSAESTFQ-ALSKTGLPDARSCINILNLYLKLDLVNKAKDFIAHIRKDGVAFDEELYKL 686
A S + +K +P + IL K+ V++A ++KD A + Y +
Sbjct: 324 FDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD-AAPNLSTYNI 383
Query: 687 VMRVYCKEGLSTDAESLIELMKKDELFVDNKFMETFSFMF-KLDGGEINENTIVSYDQVD 746
++ + C+ G A L + M+K LF + + T + M +L + + ++++D
Sbjct: 384 LIDMLCRAGKLDTAFELRDSMQKAGLFPN---VRTVNIMVDRLCKSQKLDEACAMFEEMD 443
Query: 747 HLAL--DMILRLYLANGDVGKRNKILKLILGKGGMTIVSQLVANLIREGKKMTLFICDAL 806
+ D I L +G LGK G + DA
Sbjct: 444 YKVCTPDEITFCSLIDG------------LGKVGR--------------------VDDAY 503
Query: 807 KAGTLTKELLMLDCQLDDATIASLI-SLYGKDKKINQAAEILAAVAASCTSTL-IFSSMI 866
K + +++L DC+ + SLI + + +K + + +C+ L + ++ +
Sbjct: 504 K---VYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYM 563
Query: 867 DAYIKCDKAEEAFTLYKELIEKGYDLGAVAVSRAVNTLTVGGKHQVAENVIRASLNCGLE 926
D K + E+ +++E+ + + A + S ++ L G + + G
Sbjct: 564 DCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCV 623
Query: 927 LDTVAFNTFIKAMLEAGKLHFASRIYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAVGM 986
LDT A+N I + GK++ A ++ E M G P++ TY ++I + +LD+A +
Sbjct: 624 LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYML 683
Query: 987 FNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLDEGIKPGMVSYNIMVNVYAN 1046
F A+S + + Y++LI +GK G+ EA L+ +E++ +G+ P + ++N +++
Sbjct: 684 FEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVK 743
Query: 1047 AGLHEETEKLFKAMEQDGFLLDSFTYFSLIRAYTQSCKYSEAEKIINSMQEKGIPTSCAH 1106
A E F++M++ + TY LI + K+++A MQ++G+ S
Sbjct: 744 AEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTIS 803
Query: 1107 YDLLLSALAKAGMIRKAERVYDELQTAGLNPDVTCNRTLMRGYLDYGYVKEGIKFFEST 1160
Y ++S LAKAG I +A ++D + G PD C ++ G + + FE T
Sbjct: 804 YTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEET 823
BLAST of Clc02G07960 vs. ExPASy Swiss-Prot
Match:
Q5G1S8 (Pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB1270 PE=2 SV=2)
HSP 1 Score: 183.0 bits (463), Expect = 2.1e-44
Identity = 198/945 (20.95%), Postives = 392/945 (41.48%), Query Frame = 0
Query: 295 KLTFREMCIVLKE--QKGWRQVRDVFDWMKLQLSYRPSVIVYTIVLRTYGQVGKIKLAEE 354
++T + C V+K Q+ W++ +VF+W+ L+ + P+ + +L G+ + LA E
Sbjct: 153 QMTPTDYCFVVKSVGQESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVE 212
Query: 355 TFLEMLEVGLEPDEVACGTMLCTYARWGHHKAMLSFYSAVKDRGIIPSIAVFNFMLSS-L 414
F E + M+ Y+R G A++ RG +P + FN ++++ L
Sbjct: 213 IFTR-AEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARL 272
Query: 415 QKKGLHAKVKELWMQMV-EIRVTFNEFTYTVVINSLVKEGHSEEAFKVFNEMKNCGFVPE 474
+ GL + + MV + + TY ++++ ++ + + A KVF +M+ P+
Sbjct: 273 KSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPD 332
Query: 475 EVTYNLLISLSIKRGDSDEVFRLYKDMRDKDIVPSNYTCSSLLTLFYKNGDYSNALSLFS 534
TYN +IS+ + G + E RL+ ++ K P T +SLL F + + ++
Sbjct: 333 LWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQ 392
Query: 535 EMESKKVVVDEVIYGLLIRIYGKLGLYEDAQKTFEEMEQLS-LLTDEKSYLAMAQVHLNS 594
+M+ DE+ Y +I +YGK G + A + +++M+ LS D +Y + +
Sbjct: 393 QMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKA 452
Query: 595 RNFEKALNIIDLMKSRNIWLSRFAYIVSLQCYVMKEDIRSAESTFQALSKTGL-PDARSC 654
+A ++ M I + Y + Y AE TF + ++G PD +
Sbjct: 453 NRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAY 512
Query: 655 INILNLYLKLDLVNKAKDFIAHIRKDGVAFDEELYKLVMRVYCKEGLSTDAESLIELMKK 714
+L++ L+ + KA + DG LY+L++ KE S D + I M++
Sbjct: 513 SVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEE 572
Query: 715 ---------DELFVDNKFMETFSFMFKL---DGGEINENTIV----SYDQVDHLALDMIL 774
+ V + + + K+ +G E+ +T++ SY + L
Sbjct: 573 LCGMNPLEISSVLVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFEL 632
Query: 775 RLYLANGDVGKRNKILKLIL---------------------------GKGGM--TIVSQL 834
+L G + I + ++ G M T++
Sbjct: 633 LEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCC 692
Query: 835 VAN-----LIREGKKMTLFICDALKAGTLTKELLMLDCQLDDATIA-------------- 894
VAN + + L C+A + ++ K ++++ C+L A
Sbjct: 693 VANEHYAEASQVFSDLRLSGCEA--SESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHF 752
Query: 895 -------SLISLYGKDKKINQAAEILAAVAAS--CTSTLIFSSMIDAYIKCDKAEEAFTL 954
+I YGK K +A ++ + S ++S++ AY +C E A +
Sbjct: 753 ACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAI 812
Query: 955 YKELIEKGYDLGAVAVSRAVNTLTVGGKHQVAENVIRASLNCGLELDTVAFNTFIKAMLE 1014
+ ++ G +++ ++ L V G+ + V+ + G ++ + + A
Sbjct: 813 FNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFAR 872
Query: 1015 AGKLHFASRIYEHMIALGIVPSIQTYNTMISVYGRGRKL--------------------- 1074
AG + +IY M A G +P+I+ Y MI + +G+++
Sbjct: 873 AGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAI 932
Query: 1075 --------------DKAVGMFNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEML 1126
K V ++ + +GL PDE Y LI Y + + E LL ++M
Sbjct: 933 WNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMR 992
BLAST of Clc02G07960 vs. ExPASy Swiss-Prot
Match:
O80958 (Pentatricopeptide repeat-containing protein At2g39230, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=LOJ PE=1 SV=1)
HSP 1 Score: 181.8 bits (460), Expect = 4.6e-44
Identity = 173/747 (23.16%), Postives = 320/747 (42.84%), Query Frame = 0
Query: 361 GLEPDEVACGTMLCTYARWGHHKAMLSFYSAVKDRGIIPSIAVFNFMLSSLQKKGLHAKV 420
G E A +L Y R + + + DR ++P + N +LSSL + L +
Sbjct: 164 GFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEA 223
Query: 421 KELWMQMVEIRVTFNEFTYTVVINSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISL 480
KE++ +MV I V + T +++ + ++E EEA K+F + + G P+ + ++L +
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283
Query: 481 SIKRGDSDEVFRLYKDMRDKDIVP-SNYTCSSLLTLFYKNGDYSNALSLFSEMESKKVVV 540
+ K D L ++MR K VP S T +S++ F K G+ A+ + EM + +
Sbjct: 284 ACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPM 343
Query: 541 DEVIYGLLIRIYGKLGLYEDAQKTFEEMEQLSLLTDEKSYLAMAQVHLNSRNFEKALNII 600
+ L+ Y K A F ME+ L D+ + M + + EKA+
Sbjct: 344 SVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFY 403
Query: 601 DLMKSRNIWLSRFAYIVSLQCYVMKEDIRSAESTFQALSKTGLPDARSCINILNLYLKLD 660
MKS I S +Q + E +A F ++ + C I L+ K
Sbjct: 404 MRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQG 463
Query: 661 LVNKAKDFIAHIRKDGVAFDEELYKLVMRVYCKEGLSTDAESLIELMKKDELFVDNKFME 720
V+ A F+ + + G+ + Y +M +C+ A S+ M + L +N
Sbjct: 464 KVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNN---- 523
Query: 721 TFSFMFKLDGGEINENTIVSYDQVDHLALDMILRLYLANGDVGKRNKILKLILGKGGMTI 780
F++ +DG N++ + A D+I ++ +N +
Sbjct: 524 -FTYSILIDGFFKNKD--------EQNAWDVINQMNASNFE------------------- 583
Query: 781 VSQLVANLIREGKKMTLFICDALKAGTLTKELLMLDCQLDDATIASLISLYGKDKKINQA 840
++++ N I G +C K G +K ML +LI K+K+ +
Sbjct: 584 ANEVIYNTIING------LC---KVGQTSKAKEMLQ---------NLI----KEKRYSM- 643
Query: 841 AEILAAVAASCTSTLIFSSMIDAYIKCDKAEEAFTLYKELIEKGYDLGAVAVSRAVNTLT 900
SCTS ++S+ID ++K + A Y+E+ E G V + +N
Sbjct: 644 ---------SCTS---YNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFC 703
Query: 901 VGGKHQVAENVIRASLNCGLELDTVAFNTFIKAMLEAGKLHFASRIYEHMIALGIVPSIQ 960
+ +A + + L+LD A+ I + + A ++ + LG++P++
Sbjct: 704 KSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVS 763
Query: 961 TYNTMISVYGRGRKLDKAVGMFNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEM 1020
YN++IS + K+D A+ ++ + G+S D YT +I K G + AS L+ E+
Sbjct: 764 VYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSEL 823
Query: 1021 LDEGIKPGMVSYNIMVNVYANAGLHEETEKLFKAMEQDGFLLDSFTYFSLIRAYTQSCKY 1080
LD GI P + + ++VN + G + K+ + M++ + Y ++I + +
Sbjct: 824 LDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNL 843
Query: 1081 SEAEKIINSMQEKGIPTSCAHYDLLLS 1107
+EA ++ + M EKGI ++LL+S
Sbjct: 884 NEAFRLHDEMLEKGIVHDDTVFNLLVS 843
BLAST of Clc02G07960 vs. ExPASy TrEMBL
Match:
A0A0A0KE22 (PPR_long domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G118350 PE=3 SV=1)
HSP 1 Score: 1935.6 bits (5013), Expect = 0.0e+00
Identity = 985/1070 (92.06%), Postives = 1020/1070 (95.33%), Query Frame = 0
Query: 143 MESLKTSFLSPILLPPPSNRSTRCQLKSRNAQIFIISSSVTPDPWSLSDGNPARPKPRSK 202
MESLKTSFLSPILLPPP R+TR LKSRNAQIFII SVTPDPWSLSDGNPARPKPRSK
Sbjct: 1 MESLKTSFLSPILLPPPFIRTTRSPLKSRNAQIFIIRLSVTPDPWSLSDGNPARPKPRSK 60
Query: 203 NAKKPLSDDNARRIIRAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 262
NAKKPLSDDNARRII+AKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG
Sbjct: 61 NAKKPLSDDNARRIIKAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 120
Query: 263 KHVVAAIRHVRSLSQKTEGDYDMRMEMASFVGKLTFREMCIVLKEQKGWRQVRDVFDWMK 322
KHVVAAIRHVRSLSQKTEG+Y+MRMEMASFV KLTFREMCIVLKEQKGWRQVRDVFDWMK
Sbjct: 121 KHVVAAIRHVRSLSQKTEGEYNMRMEMASFVEKLTFREMCIVLKEQKGWRQVRDVFDWMK 180
Query: 323 LQLSYRPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 382
LQLSYRPSVIVYTIVLR YGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH
Sbjct: 181 LQLSYRPSVIVYTIVLRAYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 240
Query: 383 KAMLSFYSAVKDRGIIPSIAVFNFMLSSLQKKGLHAKVKELWMQMVEIRVTFNEFTYTVV 442
K MLSFYSAVKDRGI+P IAVFNFMLSSLQKKGLHAKVKELWMQMVEI VTF++FTYTVV
Sbjct: 241 KTMLSFYSAVKDRGIVPPIAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFSDFTYTVV 300
Query: 443 INSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGDSDEVFRLYKDMRDKDI 502
INSLVKEGHSEEAFKVFNEMKNCGF+PEEVTYNLLISLSIKR +SDEV RLYKDMRDKDI
Sbjct: 301 INSLVKEGHSEEAFKVFNEMKNCGFIPEEVTYNLLISLSIKRENSDEVLRLYKDMRDKDI 360
Query: 503 VPSNYTCSSLLTLFYKNGDYSNALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAQK 562
VPSNYTCSSLLTLFYKNGDYS ALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDA K
Sbjct: 361 VPSNYTCSSLLTLFYKNGDYSKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK 420
Query: 563 TFEEMEQLSLLTDEKSYLAMAQVHLNSRNFEKALNIIDLMKSRNIWLSRFAYIVSLQCYV 622
TFEEMEQL LLTDEKSYLAMAQVHLNSRNFEKAL+II+LMKSRNIWLSRFAYIVSLQCYV
Sbjct: 421 TFEEMEQLGLLTDEKSYLAMAQVHLNSRNFEKALDIIELMKSRNIWLSRFAYIVSLQCYV 480
Query: 623 MKEDIRSAESTFQALSKTGLPDARSCINILNLYLKLDLVNKAKDFIAHIRKDGVAFDEEL 682
MKEDIRSAESTFQALSKTGLPDARSCI ILNLYLKLDLVNKAKDFIAHIRKDGV FDEEL
Sbjct: 481 MKEDIRSAESTFQALSKTGLPDARSCIYILNLYLKLDLVNKAKDFIAHIRKDGVVFDEEL 540
Query: 683 YKLVMRVYCKEGLSTDAESLIELMKKDELFVDNKFMETFSFMFKLDGGEINENTIVSYDQ 742
YKLV+RVYCKEGLS DAE LIELMKKDELFVDNKFMETFSFMFKLDGGE NE+TIV YDQ
Sbjct: 541 YKLVLRVYCKEGLSEDAEILIELMKKDELFVDNKFMETFSFMFKLDGGEKNESTIVGYDQ 600
Query: 743 VDHLALDMILRLYLANGDVGKRNKILKLILGKGGMTIVSQLVANLIREGKKMTLFICDAL 802
DH+ALDMILRLYLANGDV KRNKILK I+GKGG+T+VSQLVANLIREG D+L
Sbjct: 601 PDHIALDMILRLYLANGDVSKRNKILKFIIGKGGVTVVSQLVANLIREG--------DSL 660
Query: 803 KAGTLTKELLMLDCQLDDATIASLISLYGKDKKINQAAEILAAVAASCTSTLIFSSMIDA 862
KAGTLTKELL LDC+LDDA IASLISLYGK++KINQAAE+LAAVA SCTSTLIF SMIDA
Sbjct: 661 KAGTLTKELLKLDCRLDDAIIASLISLYGKERKINQAAEVLAAVANSCTSTLIFGSMIDA 720
Query: 863 YIKCDKAEEAFTLYKELIEKGYDLGAVAVSRAVNTLTVGGKHQVAENVIRASLNCGLELD 922
YIKCDKAEEA TLYKELIEKGYDLGAVAVSR VNTLTVGGKH+VAENV+RASLNCGLELD
Sbjct: 721 YIKCDKAEEASTLYKELIEKGYDLGAVAVSRIVNTLTVGGKHRVAENVVRASLNCGLELD 780
Query: 923 TVAFNTFIKAMLEAGKLHFASRIYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAVGMFN 982
TVAFNTFIKAMLE GKLHFASRIYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAV MFN
Sbjct: 781 TVAFNTFIKAMLEGGKLHFASRIYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAVEMFN 840
Query: 983 AARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLDEGIKPGMVSYNIMVNVYANAG 1042
AARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEML+EG+KPGMVSYNIMVNVYANAG
Sbjct: 841 AARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLEEGVKPGMVSYNIMVNVYANAG 900
Query: 1043 LHEETEKLFKAMEQDGFLLDSFTYFSLIRAYTQSCKYSEAEKIINSMQEKGIPTSCAHYD 1102
LHEETE L KAMEQD + DSFTYFSLIRAYTQSCKYSEAEKIINSMQEKGIPT+CAHYD
Sbjct: 901 LHEETENLLKAMEQDAIVPDSFTYFSLIRAYTQSCKYSEAEKIINSMQEKGIPTTCAHYD 960
Query: 1103 LLLSALAKAGMIRKAERVYDELQTAGLNPDVTCNRTLMRGYLDYGYVKEGIKFFESTCKY 1162
LLLSALAKAGMIRKAERVYDELQTAGL+PDVTCNRTLMRGYLDYGYV+EGIKFFESTCKY
Sbjct: 961 LLLSALAKAGMIRKAERVYDELQTAGLSPDVTCNRTLMRGYLDYGYVREGIKFFESTCKY 1020
Query: 1163 TGDRFIMSAAVHFYKVEGREDEALNILNSMKALGISFLKDLRVGSKLESA 1213
GDRFIMSAAVHFYK EG+EDEALNIL+SMK LG+SFLKDL++G KLESA
Sbjct: 1021 AGDRFIMSAAVHFYKAEGKEDEALNILDSMKTLGLSFLKDLQIGLKLESA 1062
BLAST of Clc02G07960 vs. ExPASy TrEMBL
Match:
A0A1S3CJB8 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g27270 OS=Cucumis melo OX=3656 GN=LOC103501077 PE=3 SV=1)
HSP 1 Score: 1926.4 bits (4989), Expect = 0.0e+00
Identity = 983/1070 (91.87%), Postives = 1018/1070 (95.14%), Query Frame = 0
Query: 143 MESLKTSFLSPILLPPPSNRSTRCQLKSRNAQIFIISSSVTPDPWSLSDGNPARPKPRSK 202
MESLKTSFLSPILLPPPS R+TR LK +NA+IFII SVTPDPWSLSDGNPARPKPRSK
Sbjct: 1 MESLKTSFLSPILLPPPSIRTTRSPLKYKNAEIFIIRLSVTPDPWSLSDGNPARPKPRSK 60
Query: 203 NAKKPLSDDNARRIIRAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 262
NAK+PLSDDNARRII+AKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG
Sbjct: 61 NAKRPLSDDNARRIIKAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 120
Query: 263 KHVVAAIRHVRSLSQKTEGDYDMRMEMASFVGKLTFREMCIVLKEQKGWRQVRDVFDWMK 322
KHVVAAIRHVRSLSQKTEG+YDMRMEMASFV KLTFREMCIVLKEQKGWRQVRDVFDWMK
Sbjct: 121 KHVVAAIRHVRSLSQKTEGEYDMRMEMASFVEKLTFREMCIVLKEQKGWRQVRDVFDWMK 180
Query: 323 LQLSYRPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 382
LQLSYRPSVIVYTIVLR YGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH
Sbjct: 181 LQLSYRPSVIVYTIVLRAYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 240
Query: 383 KAMLSFYSAVKDRGIIPSIAVFNFMLSSLQKKGLHAKVKELWMQMVEIRVTFNEFTYTVV 442
KAMLSFYSAVKDRGIIP IAVFNFMLSSLQKKGLHAKVKELWMQMVEI VTFN+FTYTVV
Sbjct: 241 KAMLSFYSAVKDRGIIPPIAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV 300
Query: 443 INSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGDSDEVFRLYKDMRDKDI 502
INSLVKEGHSEEAF+VFNEMKNCGFVPEEVTYNLLISLSIKRG+SDEV RLYKDMRDKDI
Sbjct: 301 INSLVKEGHSEEAFEVFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI 360
Query: 503 VPSNYTCSSLLTLFYKNGDYSNALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAQK 562
VPSNYTCSSLLTLFYKNGDY ALSLFSEME+KKVVVDEVIYGLLIRIYGKLGLYEDA K
Sbjct: 361 VPSNYTCSSLLTLFYKNGDYPKALSLFSEMEAKKVVVDEVIYGLLIRIYGKLGLYEDAHK 420
Query: 563 TFEEMEQLSLLTDEKSYLAMAQVHLNSRNFEKALNIIDLMKSRNIWLSRFAYIVSLQCYV 622
TFEEMEQL LLTDEKSYLAMAQVHLNSRNFEKAL+II+LMKSRNIWLSRFAYIVSLQCYV
Sbjct: 421 TFEEMEQLGLLTDEKSYLAMAQVHLNSRNFEKALDIIELMKSRNIWLSRFAYIVSLQCYV 480
Query: 623 MKEDIRSAESTFQALSKTGLPDARSCINILNLYLKLDLVNKAKDFIAHIRKDGVAFDEEL 682
MKEDIRS ESTFQALSKTGLPDARSCI ILNLYLKLDL+NKAK+FIAHIRKDGV FDEEL
Sbjct: 481 MKEDIRSTESTFQALSKTGLPDARSCIYILNLYLKLDLMNKAKEFIAHIRKDGVVFDEEL 540
Query: 683 YKLVMRVYCKEGLSTDAESLIELMKKDELFVDNKFMETFSFMFKLDGGEINENTIVSYDQ 742
YKLVMRVYCKEGLS DAE LIELMKKDELFVDNKFMETFSFMFKLDGGE NE+TIV YDQ
Sbjct: 541 YKLVMRVYCKEGLSKDAEILIELMKKDELFVDNKFMETFSFMFKLDGGEKNESTIVGYDQ 600
Query: 743 VDHLALDMILRLYLANGDVGKRNKILKLILGKGGMTIVSQLVANLIREGKKMTLFICDAL 802
DH+ALDMILRLYLANGDV KR+KILK ILGKGG+T+VSQLVANLIREG D+L
Sbjct: 601 PDHIALDMILRLYLANGDVSKRSKILKFILGKGGVTVVSQLVANLIREG--------DSL 660
Query: 803 KAGTLTKELLMLDCQLDDATIASLISLYGKDKKINQAAEILAAVAASCTSTLIFSSMIDA 862
KAGTLTKELL LDC+LDDATIASLISL+GK+KKINQAAEILAAVA SC STLIF SMIDA
Sbjct: 661 KAGTLTKELLKLDCRLDDATIASLISLFGKEKKINQAAEILAAVAVSCKSTLIFGSMIDA 720
Query: 863 YIKCDKAEEAFTLYKELIEKGYDLGAVAVSRAVNTLTVGGKHQVAENVIRASLNCGLELD 922
YIKCDKAEEAFTLYKELI KGYDLGAVAVSR VNTLTVGGKH+VAENVIRASLNCGLELD
Sbjct: 721 YIKCDKAEEAFTLYKELIGKGYDLGAVAVSRIVNTLTVGGKHRVAENVIRASLNCGLELD 780
Query: 923 TVAFNTFIKAMLEAGKLHFASRIYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAVGMFN 982
TVAFNTFIKAMLE GKLHFASRIYEHMIALG+VPSIQTYNTMISVYGRGRKLDKAV MFN
Sbjct: 781 TVAFNTFIKAMLEGGKLHFASRIYEHMIALGVVPSIQTYNTMISVYGRGRKLDKAVEMFN 840
Query: 983 AARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLDEGIKPGMVSYNIMVNVYANAG 1042
AARSSGLSPDEKAYTNLIS YGKAGKTHEASLLFKEML+EG+KPGMVSYNIMVNVYANAG
Sbjct: 841 AARSSGLSPDEKAYTNLISYYGKAGKTHEASLLFKEMLEEGVKPGMVSYNIMVNVYANAG 900
Query: 1043 LHEETEKLFKAMEQDGFLLDSFTYFSLIRAYTQSCKYSEAEKIINSMQEKGIPTSCAHYD 1102
LHEETE LFK MEQD L DSFTYFSLIRAYTQS KYSEAEK+INSMQEKGIPTSCAHYD
Sbjct: 901 LHEETENLFKVMEQDSVLPDSFTYFSLIRAYTQSGKYSEAEKVINSMQEKGIPTSCAHYD 960
Query: 1103 LLLSALAKAGMIRKAERVYDELQTAGLNPDVTCNRTLMRGYLDYGYVKEGIKFFESTCKY 1162
LLLSALAKAGMIRKAERVYDELQTAGL+PDVTCNRTLMRGYLDYGYV+EGI+FFESTCKY
Sbjct: 961 LLLSALAKAGMIRKAERVYDELQTAGLSPDVTCNRTLMRGYLDYGYVREGIEFFESTCKY 1020
Query: 1163 TGDRFIMSAAVHFYKVEGREDEALNILNSMKALGISFLKDLRVGSKLESA 1213
GDRFIMSAAVHFYK EG+EDEALNIL+SMK LGISFLKDL++G KLESA
Sbjct: 1021 AGDRFIMSAAVHFYKAEGKEDEALNILDSMKTLGISFLKDLQIGLKLESA 1062
BLAST of Clc02G07960 vs. ExPASy TrEMBL
Match:
A0A5A7THY4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold943G00180 PE=3 SV=1)
HSP 1 Score: 1877.4 bits (4862), Expect = 0.0e+00
Identity = 971/1113 (87.24%), Postives = 1005/1113 (90.30%), Query Frame = 0
Query: 143 MESLKTSFLSPILLPPPSNRSTRCQLKSRNAQIFIISSSVTPDPWSLSDGNPARPKPRSK 202
MESLKTSFLSPILLPPPS R+TR LK +NA+IFII SVTPDPWSLSDGNPARPKPRSK
Sbjct: 1 MESLKTSFLSPILLPPPSIRTTRSPLKYKNAEIFIIRLSVTPDPWSLSDGNPARPKPRSK 60
Query: 203 NAKKPLSDDNARRIIRAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 262
NAK+PLSDDNARRII+AKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG
Sbjct: 61 NAKRPLSDDNARRIIKAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 120
Query: 263 KHVVAAIRHVRSLSQKTEGDYDMRMEMASFVGKLTFREMCIVLKEQKGWRQVRDVFDWMK 322
KHVVAAIRHVRSLSQKTEG+YDMRMEMASFV KLTFREMCIVLKEQKGWRQVRDVFDWMK
Sbjct: 121 KHVVAAIRHVRSLSQKTEGEYDMRMEMASFVEKLTFREMCIVLKEQKGWRQVRDVFDWMK 180
Query: 323 LQLSYRPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 382
LQLSYRPSVIVYTIVLR YGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH
Sbjct: 181 LQLSYRPSVIVYTIVLRAYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 240
Query: 383 KAMLSFYSAVKDRGIIPSIAVFNFMLSSLQKKGLHAKVKELWMQMVEIRVTFNEFTYTVV 442
KAMLSFYSAVKDRGIIP IAVFNFMLSSLQKKGLHAKVKELWMQMVEI VTFN+FTYTVV
Sbjct: 241 KAMLSFYSAVKDRGIIPPIAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV 300
Query: 443 INSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGDSDEVFRLYKDMRDKDI 502
INSLVKEGHSEEAF+VFNEMKNCGFVPEEVTYNLLISLSIKRG+SDEV RLYKDMRDKDI
Sbjct: 301 INSLVKEGHSEEAFEVFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI 360
Query: 503 VPSNYTCSSLLTLFYKNGDYSNALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAQK 562
VPSNYTCSSLLTLFYKNGDY ALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDA K
Sbjct: 361 VPSNYTCSSLLTLFYKNGDYPKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK 420
Query: 563 TFEEMEQLSLLTDEKSYLAMAQVHLNSRNFEKALNIIDLMKSRNIWLSRFAYIVSLQCYV 622
TFEEMEQL LLTDEKSYLAMAQVHLNSRNFEKAL+II+LMKSRNIWLSRFAYIVSLQCYV
Sbjct: 421 TFEEMEQLGLLTDEKSYLAMAQVHLNSRNFEKALDIIELMKSRNIWLSRFAYIVSLQCYV 480
Query: 623 MKEDIRSAESTFQALSKTGLPDARSCINILNLYLKLDLVNKAKDFIAHIRKDGVAFDEEL 682
MKEDIRS ESTFQALSKTGLPDA+ FIAHIRKDGV FDEEL
Sbjct: 481 MKEDIRSTESTFQALSKTGLPDAQ--------------------FIAHIRKDGVVFDEEL 540
Query: 683 YKLVMRVYCKEGLSTDAESLIELMKKDELFVDNKFMETFSFMFKLDGGEINENTIVSYDQ 742
YKLVMRVYCKEGLS DAE LIELMKKDELFVDNKFMETFSFMFKLDGGE NE+TIV YDQ
Sbjct: 541 YKLVMRVYCKEGLSKDAEILIELMKKDELFVDNKFMETFSFMFKLDGGEKNESTIVGYDQ 600
Query: 743 VDHLALDMILRLYLANGDVGKRNKILKLILGKGGMTIVSQLVANLIREGKKMTLFICDAL 802
DH+ALDMILRLYLANGDV KR+KILK ILGKGG+T+VSQLVANLIREGKK+T F CD+L
Sbjct: 601 PDHIALDMILRLYLANGDVSKRSKILKFILGKGGVTVVSQLVANLIREGKKITHFFCDSL 660
Query: 803 KAGTLTKELLMLDCQLDDATIASLISLYGKDKKINQAAEILAAVAASCTSTLIFSSMIDA 862
KAGTLTKELL LDC+LDDATIASLISL+GK+KKINQAAEILAAVA SC STLIF SMIDA
Sbjct: 661 KAGTLTKELLKLDCRLDDATIASLISLFGKEKKINQAAEILAAVAVSCKSTLIFGSMIDA 720
Query: 863 YIKCDKAEEAFTLYKELIEKGYDLGAVAVSRAVNTLTVG--------------------- 922
YIKCDKAEEAFTLYKELI KGYDLGAVAVSR VNTLTVG
Sbjct: 721 YIKCDKAEEAFTLYKELIGKGYDLGAVAVSRIVNTLTVGAQTVFLNIRRLKKKEKLRLEL 780
Query: 923 ----------------------GKHQVAENVIRASLNCGLELDTVAFNTFIKAMLEAGKL 982
GKH+VAENVIRASLNCGLELDTVAFNTFIKAMLE GKL
Sbjct: 781 SVRLNADWLGGIDSSSQPIPSSGKHRVAENVIRASLNCGLELDTVAFNTFIKAMLEGGKL 840
Query: 983 HFASRIYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAVGMFNAARSSGLSPDEKAYTNL 1042
HFASRIYEHMIALG+VPSIQTYNTMISVYGRGRKLDKAV MFNAARSSGLSPDEKAYTNL
Sbjct: 841 HFASRIYEHMIALGVVPSIQTYNTMISVYGRGRKLDKAVEMFNAARSSGLSPDEKAYTNL 900
Query: 1043 ISCYGKAGKTHEASLLFKEMLDEGIKPGMVSYNIMVNVYANAGLHEETEKLFKAMEQDGF 1102
IS YGKAGKTHEASLLFKEML+EG+KPGMVSYNIMVNVYANAGLHEETE LFK MEQD
Sbjct: 901 ISYYGKAGKTHEASLLFKEMLEEGVKPGMVSYNIMVNVYANAGLHEETENLFKVMEQDSV 960
Query: 1103 LLDSFTYFSLIRAYTQSCKYSEAEKIINSMQEKGIPTSCAHYDLLLSALAKAGMIRKAER 1162
L DSFTYFSLIRAYTQS KYSEAEK+INSMQEKGIPTSCAHYDLLLSALAKAGMIRKAER
Sbjct: 961 LPDSFTYFSLIRAYTQSGKYSEAEKVINSMQEKGIPTSCAHYDLLLSALAKAGMIRKAER 1020
Query: 1163 VYDELQTAGLNPDVTCNRTLMRGYLDYGYVKEGIKFFESTCKYTGDRFIMSAAVHFYKVE 1213
VYDELQTAGL+PDVTCNRTLMRGYLDYGYV+EGI+FFESTCKY GDRFIMSAAVHFYK E
Sbjct: 1021 VYDELQTAGLSPDVTCNRTLMRGYLDYGYVREGIEFFESTCKYAGDRFIMSAAVHFYKAE 1080
BLAST of Clc02G07960 vs. ExPASy TrEMBL
Match:
A0A5D3BQE2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G001870 PE=3 SV=1)
HSP 1 Score: 1875.5 bits (4857), Expect = 0.0e+00
Identity = 961/1070 (89.81%), Postives = 993/1070 (92.80%), Query Frame = 0
Query: 143 MESLKTSFLSPILLPPPSNRSTRCQLKSRNAQIFIISSSVTPDPWSLSDGNPARPKPRSK 202
MESLKTSFLSPILLPPPS R+TR LK +NA+IFII SVTPDPWSLSDGNPARPKPRSK
Sbjct: 1 MESLKTSFLSPILLPPPSIRTTRSPLKYKNAEIFIIRLSVTPDPWSLSDGNPARPKPRSK 60
Query: 203 NAKKPLSDDNARRIIRAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 262
NAK+PLSDDNARRII+AKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG
Sbjct: 61 NAKRPLSDDNARRIIKAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 120
Query: 263 KHVVAAIRHVRSLSQKTEGDYDMRMEMASFVGKLTFREMCIVLKEQKGWRQVRDVFDWMK 322
KHVVAAIRHVRSLSQKTEG+YDMRMEMASFV KLTFREMCIVLKEQKGWRQVRDVFDWMK
Sbjct: 121 KHVVAAIRHVRSLSQKTEGEYDMRMEMASFVEKLTFREMCIVLKEQKGWRQVRDVFDWMK 180
Query: 323 LQLSYRPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 382
LQLSYRPSVIVYTIVLR YGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH
Sbjct: 181 LQLSYRPSVIVYTIVLRAYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 240
Query: 383 KAMLSFYSAVKDRGIIPSIAVFNFMLSSLQKKGLHAKVKELWMQMVEIRVTFNEFTYTVV 442
KAMLSFYSAVKDRGIIP IAVFNFMLSSLQKKGLHAKVKELWMQMVEI VTFN+FTYTVV
Sbjct: 241 KAMLSFYSAVKDRGIIPPIAVFNFMLSSLQKKGLHAKVKELWMQMVEIGVTFNDFTYTVV 300
Query: 443 INSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGDSDEVFRLYKDMRDKDI 502
INSLVKEGHSEEAF+VFNEMKNCGFVPEEVTYNLLISLSIKRG+SDEV RLYKDMRDKDI
Sbjct: 301 INSLVKEGHSEEAFEVFNEMKNCGFVPEEVTYNLLISLSIKRGNSDEVLRLYKDMRDKDI 360
Query: 503 VPSNYTCSSLLTLFYKNGDYSNALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAQK 562
VPSNYTCSSLLTLFYKNGDY ALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDA K
Sbjct: 361 VPSNYTCSSLLTLFYKNGDYPKALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAHK 420
Query: 563 TFEEMEQLSLLTDEKSYLAMAQVHLNSRNFEKALNIIDLMKSRNIWLSRFAYIVSLQCYV 622
TFEEMEQL LLTDEKSYLAMAQVHLNSRNFEKAL+II+LMKSRNIWLSRFAYIVSLQCYV
Sbjct: 421 TFEEMEQLGLLTDEKSYLAMAQVHLNSRNFEKALDIIELMKSRNIWLSRFAYIVSLQCYV 480
Query: 623 MKEDIRSAESTFQALSKTGLPDARSCINILNLYLKLDLVNKAKDFIAHIRKDGVAFDEEL 682
MKEDIRS ESTFQALSKTGLPDARSCI ILNLYLKLDL+NKAK+FIAHIRKDGV FDEEL
Sbjct: 481 MKEDIRSTESTFQALSKTGLPDARSCIYILNLYLKLDLMNKAKEFIAHIRKDGVVFDEEL 540
Query: 683 YKLVMRVYCKEGLSTDAESLIELMKKDELFVDNKFMETFSFMFKLDGGEINENTIVSYDQ 742
YKLVMRVYCKEGLS DAE LIELMKKDELFVDNKFMETFSFMFKLDGGE NE+TIV YDQ
Sbjct: 541 YKLVMRVYCKEGLSKDAEILIELMKKDELFVDNKFMETFSFMFKLDGGEKNESTIVGYDQ 600
Query: 743 VDHLALDMILRLYLANGDVGKRNKILKLILGKGGMTIVSQLVANLIREGKKMTLFICDAL 802
DH+ALDMILRLYLANGDV KR+ D+L
Sbjct: 601 PDHIALDMILRLYLANGDVSKRS----------------------------------DSL 660
Query: 803 KAGTLTKELLMLDCQLDDATIASLISLYGKDKKINQAAEILAAVAASCTSTLIFSSMIDA 862
KAGTLTKELL LDC+LDDATIASLISL+GK+KKINQAAEILAAVA SC STLIF SMIDA
Sbjct: 661 KAGTLTKELLKLDCRLDDATIASLISLFGKEKKINQAAEILAAVAVSCKSTLIFGSMIDA 720
Query: 863 YIKCDKAEEAFTLYKELIEKGYDLGAVAVSRAVNTLTVGGKHQVAENVIRASLNCGLELD 922
YIKCDKAEEAFTLYKELI KGYDLGAVAVSR VNTLTVGGKH+VAENVIRASLNCGLELD
Sbjct: 721 YIKCDKAEEAFTLYKELIGKGYDLGAVAVSRIVNTLTVGGKHRVAENVIRASLNCGLELD 780
Query: 923 TVAFNTFIKAMLEAGKLHFASRIYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAVGMFN 982
TVAFNTFIKAMLE GKLHFASRIYEHMIALG+VPSIQTYNTMISVYGRGRKLDKAV MFN
Sbjct: 781 TVAFNTFIKAMLEGGKLHFASRIYEHMIALGVVPSIQTYNTMISVYGRGRKLDKAVEMFN 840
Query: 983 AARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLDEGIKPGMVSYNIMVNVYANAG 1042
AARSSGLSPDEKAYTNLIS YGKAGKTHEASLLFKEML+EG+KPGMVSYNIMVNVYANAG
Sbjct: 841 AARSSGLSPDEKAYTNLISYYGKAGKTHEASLLFKEMLEEGVKPGMVSYNIMVNVYANAG 900
Query: 1043 LHEETEKLFKAMEQDGFLLDSFTYFSLIRAYTQSCKYSEAEKIINSMQEKGIPTSCAHYD 1102
LHEETE LFK MEQD L DSFTYFSLIRAYTQS KYSEAEK+INSMQEKGIPTSCAHYD
Sbjct: 901 LHEETENLFKVMEQDSVLPDSFTYFSLIRAYTQSGKYSEAEKVINSMQEKGIPTSCAHYD 960
Query: 1103 LLLSALAKAGMIRKAERVYDELQTAGLNPDVTCNRTLMRGYLDYGYVKEGIKFFESTCKY 1162
LLLSALAKAGMIRKAERVYDELQTAGL+PDVTCNRTLMRGYLDYGYV+EGI+FFESTCKY
Sbjct: 961 LLLSALAKAGMIRKAERVYDELQTAGLSPDVTCNRTLMRGYLDYGYVREGIEFFESTCKY 1020
Query: 1163 TGDRFIMSAAVHFYKVEGREDEALNILNSMKALGISFLKDLRVGSKLESA 1213
GDRFIMSAAVHFYK EG+EDEALNIL+SMK LGISFLKDL++G KLESA
Sbjct: 1021 AGDRFIMSAAVHFYKAEGKEDEALNILDSMKTLGISFLKDLQIGLKLESA 1036
BLAST of Clc02G07960 vs. ExPASy TrEMBL
Match:
A0A6J1D3B2 (pentatricopeptide repeat-containing protein At5g27270 OS=Momordica charantia OX=3673 GN=LOC111017215 PE=3 SV=1)
HSP 1 Score: 1848.9 bits (4788), Expect = 0.0e+00
Identity = 945/1071 (88.24%), Postives = 994/1071 (92.81%), Query Frame = 0
Query: 143 MESLKTSFLSPILLPPPSNRSTRCQLKSRNAQIFIISSSVTPDPWSLSDGNPARPKPRSK 202
MESLKTSF +PILLPP SNRS RC +SR Q FII SSVTPDPWSLSDGNP +PKPRSK
Sbjct: 1 MESLKTSFFTPILLPPISNRSRRCPSESRKPQFFIIHSSVTPDPWSLSDGNPEKPKPRSK 60
Query: 203 NAKKPLSDDNARRIIRAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 262
NAKKPLSDDNARRII+AKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG
Sbjct: 61 NAKKPLSDDNARRIIKAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYG 120
Query: 263 KHVVAAIRHVRSLSQKTEGDYDMRMEMASFVGKLTFREMCIVLKEQKGWRQVRDVFDWMK 322
KHVVAAIRHVRSLSQ+ EG+YDMRMEMASFVGKLTFREMC VLKEQKGWRQ RDVFDWMK
Sbjct: 121 KHVVAAIRHVRSLSQRGEGEYDMRMEMASFVGKLTFREMCTVLKEQKGWRQXRDVFDWMK 180
Query: 323 LQLSYRPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 382
LQLSYRPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH
Sbjct: 181 LQLSYRPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHH 240
Query: 383 KAMLSFYSAVKDRGIIPSIAVFNFMLSSLQKKGLHAKVKELWMQMVEIRVTFNEFTYTVV 442
KAMLSFYSAVKDRGIIPSIAVFNFMLSSLQKKGLHAKV ELW QMVEI VTFNEFTYTVV
Sbjct: 241 KAMLSFYSAVKDRGIIPSIAVFNFMLSSLQKKGLHAKVHELWRQMVEIGVTFNEFTYTVV 300
Query: 443 INSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGDSDEVFRLYKDMRDKDI 502
INSLVKEGHSEEAFKVFN+MK CGFVPEEVTYNLLISLSIK G+SDEV LYKDMR+K+I
Sbjct: 301 INSLVKEGHSEEAFKVFNDMKICGFVPEEVTYNLLISLSIKGGNSDEVLXLYKDMREKEI 360
Query: 503 VPSNYTCSSLLTLFYKNGDYSNALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAQK 562
VPSNYTCSSLLTLFYKNGDYS ALSLF EMESKKVVVDEVIYGLLIRIYGKLGLYEDAQK
Sbjct: 361 VPSNYTCSSLLTLFYKNGDYSKALSLFLEMESKKVVVDEVIYGLLIRIYGKLGLYEDAQK 420
Query: 563 TFEEMEQLSLLTDEKSYLAMAQVHLNSRNFEKALNIIDLMKSRNIWLSRFAYIVSLQCYV 622
TFEEMEQL LLTDEKSYLAMAQVHL+SRNFEKALNII+LMKSRNIWLSRF+YIVSLQCYV
Sbjct: 421 TFEEMEQLGLLTDEKSYLAMAQVHLSSRNFEKALNIIELMKSRNIWLSRFSYIVSLQCYV 480
Query: 623 MKEDIRSAESTFQALSKTGLPDARSCINILNLYLKLDLVNKAKDFIAHIRKDGVAFDEEL 682
MKEDIRS ESTFQALSKTGLPDARSC NILNLYLKLD V KAKDFIA IRKDGV FDEEL
Sbjct: 481 MKEDIRSVESTFQALSKTGLPDARSCFNILNLYLKLDXVEKAKDFIAQIRKDGVVFDEEL 540
Query: 683 YKLVMRVYCKEGLSTDAESLIELMKKDELFVDNKFMETFSFMFKLDGGEINENTIVSYDQ 742
YKLVMRVYCKEG+ DA+ LIE+M+KDE F+DNKF+ETFSFM KLDGG+I EN IV YDQ
Sbjct: 541 YKLVMRVYCKEGMLKDAKILIEVMRKDESFLDNKFVETFSFMIKLDGGDIKENAIVGYDQ 600
Query: 743 VDHLALDMILRLYLANGDVGKRNKILKLILGKGGMTIVSQLVANLIREGKKMTLFICDAL 802
D++AL MILRLYLANGDVGKRNKILKLILGKGGM +VSQLV NLIREG DA
Sbjct: 601 PDYMALGMILRLYLANGDVGKRNKILKLILGKGGMMVVSQLVTNLIREG--------DAF 660
Query: 803 KAGTLTKELLMLDCQLDDATIASLISLYGKDKKINQAAEILAAVAASCTSTLIFSSMIDA 862
KAGTLTKELL LDC+LDDATIASLISLYGK+KKINQAAEI AAVA S TS LI +MIDA
Sbjct: 661 KAGTLTKELLNLDCRLDDATIASLISLYGKEKKINQAAEIFAAVADSSTSKLICGTMIDA 720
Query: 863 YIKCDKAEEAFTLYKELIEKGYDLGAVAVSRAVNTLTVGGKHQVAENVIRASLNCGLELD 922
Y KCDKAEEA+TLYKELI KG DLGAVAVSR VNTLT+GGKHQVAENVIRAS+ CGLELD
Sbjct: 721 YTKCDKAEEAYTLYKELIXKGNDLGAVAVSRIVNTLTIGGKHQVAENVIRASIKCGLELD 780
Query: 923 TVAFNTFIKAMLEAGKLHFASRIYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAVGMFN 982
TVAFNTFIKAMLEAGKLHFAS+I+EHMIALGIVPSIQTYNTMISVYGRGRKLDKA+ MFN
Sbjct: 781 TVAFNTFIKAMLEAGKLHFASKIFEHMIALGIVPSIQTYNTMISVYGRGRKLDKAIEMFN 840
Query: 983 AARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLDEGIKPGMVSYNIMVNVYANAG 1042
AARSSG+SPDEKAYTNLISCYGKAGKT+EASLLFKEML+EGIKPGMVSYNIM+NVYA G
Sbjct: 841 AARSSGVSPDEKAYTNLISCYGKAGKTNEASLLFKEMLEEGIKPGMVSYNIMINVYATVG 900
Query: 1043 LHEETEKLFKAMEQDGFLLDSFTYFSLIRAYTQSCKYSEAEKIINSMQEKGIPTSCAHYD 1102
LHEETEKLF+AMEQD FL DS +YFSLIRAYTQSCKYSEAE++INSM+EKGIPTSCAH+D
Sbjct: 901 LHEETEKLFRAMEQDSFLPDSVSYFSLIRAYTQSCKYSEAEEVINSMKEKGIPTSCAHFD 960
Query: 1103 LLLSALAKAGMIRKAERVYDELQTAGLNPDVTCNRTLMRGYLDYGYVKEGIKFFESTCKY 1162
LLLSALAKAGMIRKAERVYDEL+TAGLNPDVTCNR+LMRGYLDYGYV+EGI FFEST KY
Sbjct: 961 LLLSALAKAGMIRKAERVYDELRTAGLNPDVTCNRSLMRGYLDYGYVEEGINFFESTWKY 1020
Query: 1163 T-GDRFIMSAAVHFYKVEGREDEALNILNSMKALGISFLKDLRVGSKLESA 1213
GDRFIMSAAVHFY+ G+E EALNILNSMK+L I FLKDLRVGSKLE+A
Sbjct: 1021 AEGDRFIMSAAVHFYRXAGKEVEALNILNSMKSLSILFLKDLRVGSKLETA 1063
BLAST of Clc02G07960 vs. TAIR 10
Match:
AT5G27270.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 1098.6 bits (2840), Expect = 0.0e+00
Identity = 573/1041 (55.04%), Postives = 744/1041 (71.47%), Query Frame = 0
Query: 148 TSFLSPILLPPPSNRSTRCQLKSRNAQIFIISSSVTPDPWSLSDGNPARPKPRSKNAKKP 207
T F I LP +R++R +KS ++ SS V PDPWSLSDGNP +PKPR + K P
Sbjct: 10 THFNPSIFLPKIPSRNSRISIKSSSS-----SSKVRPDPWSLSDGNPEKPKPRYERPKHP 69
Query: 208 LSDDNARRIIRAKAQYLSVLRRNQGPRAQTPKWIKRTPEQMVQYLEDDRNGHLYGKHVVA 267
LSDD+ARRII+ KAQYLS LRRNQG +A TPKWIKRTPEQMVQYLEDDRNG +YGKHVVA
Sbjct: 70 LSDDDARRIIKKKAQYLSTLRRNQGSQAMTPKWIKRTPEQMVQYLEDDRNGQMYGKHVVA 129
Query: 268 AIRHVRSLSQKTEGDYDMRMEMASFVGKLTFREMCIVLKEQKGWRQVRDVFDWMKLQLSY 327
AI+ VR LSQ+ +G DMR M+SFV KL+FR+MC+VLKEQ+GWRQVRD F WMKLQLSY
Sbjct: 130 AIKTVRGLSQRRQGSDDMRFVMSSFVAKLSFRDMCVVLKEQRGWRQVRDFFSWMKLQLSY 189
Query: 328 RPSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHHKAMLS 387
RPSV+VYTIVLR YGQVGKIK+AEETFLEMLEVG EPD VACGTMLCTYARWG H AML+
Sbjct: 190 RPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLT 249
Query: 388 FYSAVKDRGIIPSIAVFNFMLSSLQKKGLHAKVKELWMQMVEIRVTFNEFTYTVVINSLV 447
FY AV++R I+ S +V+NFMLSSLQKK H KV +LW++MVE V NEFTYT+V++S
Sbjct: 250 FYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYA 309
Query: 448 KEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGDSDEVFRLYKDMRDKDIVPSNY 507
K+G EEA K F EMK+ GFVPEEVTY+ +ISLS+K GD ++ LY+DMR + IVPSNY
Sbjct: 310 KQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNY 369
Query: 508 TCSSLLTLFYKNGDYSNALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAQKTFEEM 567
TC+++L+L+YK +Y ALSLF++ME K+ DEVI GL+IRIYGKLGL+ DAQ FEE
Sbjct: 370 TCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEET 429
Query: 568 EQLSLLTDEKSYLAMAQVHLNSRNFEKALNIIDLMKSRNIWLSRFAYIVSLQCYVMKEDI 627
E+L+LL DEK+YLAM+QVHLNS N KAL++I++MK+R+I LSRFAYIV LQCY +++
Sbjct: 430 ERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNV 489
Query: 628 RSAESTFQALSKTGLPDARSCINILNLYLKLDLVNKAKDFIAHIRKDGVAFDEELYKLVM 687
AE F+ALSKTGLPDA SC ++LNLY +L+L KAK FI I D V FD ELYK M
Sbjct: 490 DCAEEAFRALSKTGLPDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAM 549
Query: 688 RVYCKEGLSTDAESLIELMKKDELFVDNKFMETFSFMFKLDGGEINENTIVSYDQVDHLA 747
RVYCKEG+ +A+ LI M ++ DN+F++T + + +++ Q+D +A
Sbjct: 550 RVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNVSQLDVMA 609
Query: 748 LDMILRLYLANGDVGKRNKILKLILGKG-GMTIVSQLVANLIREGKKMTLFICDALKAGT 807
L ++L L L G++ + IL L+ G + V++++++ +REG D KA
Sbjct: 610 LGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAVNRVISSFVREG--------DVSKAEM 669
Query: 808 LTKELLMLDCQLDDATIASLISLYGKDKKINQAAEI-LAAVAASCTSTLIFSSMIDAYIK 867
+ ++ L ++++ TIA+LI++YG+ K+ +A + LAA + + SMIDAY++
Sbjct: 670 IADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESKTPGKSVIRSMIDAYVR 729
Query: 868 CDKAEEAFTLYKELIEKGYDLGAVAVSRAVNTLTVGGKHQVAENVIRASLNCGLELDTVA 927
C E+A+ L+ E EKG D GAV +S VN LT GKH+ AE++ R L +ELDTV
Sbjct: 730 CGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVG 789
Query: 928 FNTFIKAMLEAGKLHFASRIYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAVGMFNAAR 987
+NT IKAMLEAGKL AS IYE M G+ SIQTYNTMISVYGRG +LDKA+ +F+ AR
Sbjct: 790 YNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNAR 849
Query: 988 SSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLDEGIKPGMVSYNIMVNVYANAGLHE 1047
SGL DEK YTN+I YGK GK EA LF EM +GIKPG SYN+MV + A + LH
Sbjct: 850 RSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHH 909
Query: 1048 ETEKLFKAMEQDGFLLDSFTYFSLIRAYTQSCKYSEAEKIINSMQEKGIPTSCAHYDLLL 1107
E ++L +AME++G D TY +LI+ Y +S +++EAEK I ++EKGIP S +H+ LL
Sbjct: 910 EVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLL 969
Query: 1108 SALAKAGMIRKAERVYDELQTAGLNPDVTCNRTLMRGYLDYGYVKEGIKFFESTCKYT-- 1167
SAL KAGM+ +AER Y ++ AG++PD C RT+++GY+ G ++GI F+E + +
Sbjct: 970 SALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVE 1029
Query: 1168 GDRFIMSAAVHFYKVEGREDE 1185
DRF+ S YK G+E +
Sbjct: 1030 DDRFVSSVVEDLYKAVGKEQD 1037
BLAST of Clc02G07960 vs. TAIR 10
Match:
AT4G31850.1 (proton gradient regulation 3 )
HSP 1 Score: 192.2 bits (487), Expect = 2.4e-48
Identity = 185/815 (22.70%), Postives = 338/815 (41.47%), Query Frame = 0
Query: 329 PSVIVYTIVLRTYGQVGKIKLAEETFLEMLEVGLEPDEVACGTMLCTYARWGHHKAMLSF 388
P V+ YT+++ K+ A+E F +M +PD V T+L ++ ++ F
Sbjct: 291 PDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQF 350
Query: 389 YSAVKDRGIIPSIAVFNFMLSSLQKKGLHAKVKELWMQMVEIRVTFNEFTYTVVINSLVK 448
+S ++ G +P + F ++ +L K G + + M + + N TY +I L++
Sbjct: 351 WSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLR 410
Query: 449 EGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGDSDEVFRLYKDMRDKDIVPSNYT 508
++A ++F M++ G P TY + I K GDS ++ M+ K I P+
Sbjct: 411 VHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVA 470
Query: 509 CSSLLTLFYKNGDYSNALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAQKTFEEME 568
C++ L K G A +F ++ +V D V Y ++++ Y K+G ++A K EM
Sbjct: 471 CNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMM 530
Query: 569 QLSLLTDEKSYLAMAQVHLNSRNFEKALNIIDLMKSRNIWLSRFAYIVSLQCYVMKEDIR 628
+ D ++ + ++A + MK + + Y L I+
Sbjct: 531 ENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQ 590
Query: 629 SAESTFQALSKTGLPDARSCINIL-NLYLKLDLVNKAKDFIAHIRKDGVAFDEELYKLVM 688
A F+ + + G P N L + K D V A + + G D Y ++
Sbjct: 591 EAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII 650
Query: 689 RVYCKEGLSTDAESLIELMKK----DELFVDNKFMETFSFMFKLDGGEINENTIVS-YDQ 748
K G +A MKK D + + D +I N + + DQ
Sbjct: 651 FGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQ 710
Query: 749 VDHLALDMILRLYLANGDVGKRNKILKLILGKGGMTIVSQLVANLIREGKKMTLFICDAL 808
+L + ++ LA + + ++ G ++ +IR K +
Sbjct: 711 PANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHN----NVS 770
Query: 809 KAGTLTKELLM-LDCQLDDATIASLISLYGKDKKINQAAEILAAVAAS--CTSTLIFSSM 868
A TL ++ L Q T LI + I A ++ V ++ ++ +
Sbjct: 771 GARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFL 830
Query: 869 IDAYIKCDKAEEAFTLYKELIEKGYDLGAVAVSRAVNTLTVGGKHQVAENVIRASL-NCG 928
+DAY K K +E F LYKE+ + + + ++ L G A ++ + +
Sbjct: 831 LDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRD 890
Query: 929 LELDTVAFNTFIKAMLEAGKLHFASRIYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAV 988
+ I + ++G+L+ A +++E M+ G P+ YN +I+ +G+ + D A
Sbjct: 891 FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAAC 950
Query: 989 GMFNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLDEGIKPGMVSYNIMVNVY 1048
+F G+ PD K Y+ L+ C G+ E FKE+ + G+ P +V YN+++N
Sbjct: 951 ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGL 1010
Query: 1049 ANAGLHEETEKLFKAMEQD-GFLLDSFTYFSLIRAYTQSCKYSEAEKIINSMQEKGIPTS 1108
+ EE LF M+ G D +TY SLI + EA KI N +Q G+ +
Sbjct: 1011 GKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPN 1070
Query: 1109 CAHYDLLLSALAKAGMIRKAERVYDELQTAGLNPD 1133
++ L+ + +G A VY + T G +P+
Sbjct: 1071 VFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
BLAST of Clc02G07960 vs. TAIR 10
Match:
AT3G06920.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 187.2 bits (474), Expect = 7.8e-47
Identity = 169/719 (23.50%), Postives = 317/719 (44.09%), Query Frame = 0
Query: 447 VKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISLSIKRGDSDEVFRLYKDMRDKDIVPSN 506
VK E + V M+ F P Y LI SD + L++ M++ P+
Sbjct: 144 VKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTV 203
Query: 507 YTCSSLLTLFYKNGDYSNALSLFSEMESKKVVVDEVIYGLLIRIYGKLGLYEDAQKTFEE 566
+ ++L+ F K G +ALSL EM+S + D V+Y + I +GK+G + A K F E
Sbjct: 204 HLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHE 263
Query: 567 MEQLSLLTDEKSYLAMAQVHLNSRNFEKALNIIDLMKSRNIWLSRFAYIVSLQCYVMKED 626
+E L DE +Y +M V + ++A+ + + ++ +AY + Y
Sbjct: 264 IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGK 323
Query: 627 IRSAESTFQ-ALSKTGLPDARSCINILNLYLKLDLVNKAKDFIAHIRKDGVAFDEELYKL 686
A S + +K +P + IL K+ V++A ++KD A + Y +
Sbjct: 324 FDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD-AAPNLSTYNI 383
Query: 687 VMRVYCKEGLSTDAESLIELMKKDELFVDNKFMETFSFMF-KLDGGEINENTIVSYDQVD 746
++ + C+ G A L + M+K LF + + T + M +L + + ++++D
Sbjct: 384 LIDMLCRAGKLDTAFELRDSMQKAGLFPN---VRTVNIMVDRLCKSQKLDEACAMFEEMD 443
Query: 747 HLAL--DMILRLYLANGDVGKRNKILKLILGKGGMTIVSQLVANLIREGKKMTLFICDAL 806
+ D I L +G LGK G + DA
Sbjct: 444 YKVCTPDEITFCSLIDG------------LGKVGR--------------------VDDAY 503
Query: 807 KAGTLTKELLMLDCQLDDATIASLI-SLYGKDKKINQAAEILAAVAASCTSTL-IFSSMI 866
K + +++L DC+ + SLI + + +K + + +C+ L + ++ +
Sbjct: 504 K---VYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYM 563
Query: 867 DAYIKCDKAEEAFTLYKELIEKGYDLGAVAVSRAVNTLTVGGKHQVAENVIRASLNCGLE 926
D K + E+ +++E+ + + A + S ++ L G + + G
Sbjct: 564 DCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCV 623
Query: 927 LDTVAFNTFIKAMLEAGKLHFASRIYEHMIALGIVPSIQTYNTMISVYGRGRKLDKAVGM 986
LDT A+N I + GK++ A ++ E M G P++ TY ++I + +LD+A +
Sbjct: 624 LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYML 683
Query: 987 FNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEMLDEGIKPGMVSYNIMVNVYAN 1046
F A+S + + Y++LI +GK G+ EA L+ +E++ +G+ P + ++N +++
Sbjct: 684 FEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVK 743
Query: 1047 AGLHEETEKLFKAMEQDGFLLDSFTYFSLIRAYTQSCKYSEAEKIINSMQEKGIPTSCAH 1106
A E F++M++ + TY LI + K+++A MQ++G+ S
Sbjct: 744 AEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTIS 803
Query: 1107 YDLLLSALAKAGMIRKAERVYDELQTAGLNPDVTCNRTLMRGYLDYGYVKEGIKFFEST 1160
Y ++S LAKAG I +A ++D + G PD C ++ G + + FE T
Sbjct: 804 YTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEET 823
BLAST of Clc02G07960 vs. TAIR 10
Match:
AT3G18110.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 183.0 bits (463), Expect = 1.5e-45
Identity = 198/945 (20.95%), Postives = 392/945 (41.48%), Query Frame = 0
Query: 295 KLTFREMCIVLKE--QKGWRQVRDVFDWMKLQLSYRPSVIVYTIVLRTYGQVGKIKLAEE 354
++T + C V+K Q+ W++ +VF+W+ L+ + P+ + +L G+ + LA E
Sbjct: 153 QMTPTDYCFVVKSVGQESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVE 212
Query: 355 TFLEMLEVGLEPDEVACGTMLCTYARWGHHKAMLSFYSAVKDRGIIPSIAVFNFMLSS-L 414
F E + M+ Y+R G A++ RG +P + FN ++++ L
Sbjct: 213 IFTR-AEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARL 272
Query: 415 QKKGLHAKVKELWMQMV-EIRVTFNEFTYTVVINSLVKEGHSEEAFKVFNEMKNCGFVPE 474
+ GL + + MV + + TY ++++ ++ + + A KVF +M+ P+
Sbjct: 273 KSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPD 332
Query: 475 EVTYNLLISLSIKRGDSDEVFRLYKDMRDKDIVPSNYTCSSLLTLFYKNGDYSNALSLFS 534
TYN +IS+ + G + E RL+ ++ K P T +SLL F + + ++
Sbjct: 333 LWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQ 392
Query: 535 EMESKKVVVDEVIYGLLIRIYGKLGLYEDAQKTFEEMEQLS-LLTDEKSYLAMAQVHLNS 594
+M+ DE+ Y +I +YGK G + A + +++M+ LS D +Y + +
Sbjct: 393 QMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKA 452
Query: 595 RNFEKALNIIDLMKSRNIWLSRFAYIVSLQCYVMKEDIRSAESTFQALSKTGL-PDARSC 654
+A ++ M I + Y + Y AE TF + ++G PD +
Sbjct: 453 NRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAY 512
Query: 655 INILNLYLKLDLVNKAKDFIAHIRKDGVAFDEELYKLVMRVYCKEGLSTDAESLIELMKK 714
+L++ L+ + KA + DG LY+L++ KE S D + I M++
Sbjct: 513 SVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEE 572
Query: 715 ---------DELFVDNKFMETFSFMFKL---DGGEINENTIV----SYDQVDHLALDMIL 774
+ V + + + K+ +G E+ +T++ SY + L
Sbjct: 573 LCGMNPLEISSVLVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFEL 632
Query: 775 RLYLANGDVGKRNKILKLIL---------------------------GKGGM--TIVSQL 834
+L G + I + ++ G M T++
Sbjct: 633 LEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCC 692
Query: 835 VAN-----LIREGKKMTLFICDALKAGTLTKELLMLDCQLDDATIA-------------- 894
VAN + + L C+A + ++ K ++++ C+L A
Sbjct: 693 VANEHYAEASQVFSDLRLSGCEA--SESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHF 752
Query: 895 -------SLISLYGKDKKINQAAEILAAVAAS--CTSTLIFSSMIDAYIKCDKAEEAFTL 954
+I YGK K +A ++ + S ++S++ AY +C E A +
Sbjct: 753 ACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAI 812
Query: 955 YKELIEKGYDLGAVAVSRAVNTLTVGGKHQVAENVIRASLNCGLELDTVAFNTFIKAMLE 1014
+ ++ G +++ ++ L V G+ + V+ + G ++ + + A
Sbjct: 813 FNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFAR 872
Query: 1015 AGKLHFASRIYEHMIALGIVPSIQTYNTMISVYGRGRKL--------------------- 1074
AG + +IY M A G +P+I+ Y MI + +G+++
Sbjct: 873 AGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAI 932
Query: 1075 --------------DKAVGMFNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEML 1126
K V ++ + +GL PDE Y LI Y + + E LL ++M
Sbjct: 933 WNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMR 992
BLAST of Clc02G07960 vs. TAIR 10
Match:
AT2G39230.1 (LATERAL ORGAN JUNCTION )
HSP 1 Score: 181.8 bits (460), Expect = 3.3e-45
Identity = 173/747 (23.16%), Postives = 320/747 (42.84%), Query Frame = 0
Query: 361 GLEPDEVACGTMLCTYARWGHHKAMLSFYSAVKDRGIIPSIAVFNFMLSSLQKKGLHAKV 420
G E A +L Y R + + + DR ++P + N +LSSL + L +
Sbjct: 164 GFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEA 223
Query: 421 KELWMQMVEIRVTFNEFTYTVVINSLVKEGHSEEAFKVFNEMKNCGFVPEEVTYNLLISL 480
KE++ +MV I V + T +++ + ++E EEA K+F + + G P+ + ++L +
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283
Query: 481 SIKRGDSDEVFRLYKDMRDKDIVP-SNYTCSSLLTLFYKNGDYSNALSLFSEMESKKVVV 540
+ K D L ++MR K VP S T +S++ F K G+ A+ + EM + +
Sbjct: 284 ACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPM 343
Query: 541 DEVIYGLLIRIYGKLGLYEDAQKTFEEMEQLSLLTDEKSYLAMAQVHLNSRNFEKALNII 600
+ L+ Y K A F ME+ L D+ + M + + EKA+
Sbjct: 344 SVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFY 403
Query: 601 DLMKSRNIWLSRFAYIVSLQCYVMKEDIRSAESTFQALSKTGLPDARSCINILNLYLKLD 660
MKS I S +Q + E +A F ++ + C I L+ K
Sbjct: 404 MRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQG 463
Query: 661 LVNKAKDFIAHIRKDGVAFDEELYKLVMRVYCKEGLSTDAESLIELMKKDELFVDNKFME 720
V+ A F+ + + G+ + Y +M +C+ A S+ M + L +N
Sbjct: 464 KVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNN---- 523
Query: 721 TFSFMFKLDGGEINENTIVSYDQVDHLALDMILRLYLANGDVGKRNKILKLILGKGGMTI 780
F++ +DG N++ + A D+I ++ +N +
Sbjct: 524 -FTYSILIDGFFKNKD--------EQNAWDVINQMNASNFE------------------- 583
Query: 781 VSQLVANLIREGKKMTLFICDALKAGTLTKELLMLDCQLDDATIASLISLYGKDKKINQA 840
++++ N I G +C K G +K ML +LI K+K+ +
Sbjct: 584 ANEVIYNTIING------LC---KVGQTSKAKEMLQ---------NLI----KEKRYSM- 643
Query: 841 AEILAAVAASCTSTLIFSSMIDAYIKCDKAEEAFTLYKELIEKGYDLGAVAVSRAVNTLT 900
SCTS ++S+ID ++K + A Y+E+ E G V + +N
Sbjct: 644 ---------SCTS---YNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFC 703
Query: 901 VGGKHQVAENVIRASLNCGLELDTVAFNTFIKAMLEAGKLHFASRIYEHMIALGIVPSIQ 960
+ +A + + L+LD A+ I + + A ++ + LG++P++
Sbjct: 704 KSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVS 763
Query: 961 TYNTMISVYGRGRKLDKAVGMFNAARSSGLSPDEKAYTNLISCYGKAGKTHEASLLFKEM 1020
YN++IS + K+D A+ ++ + G+S D YT +I K G + AS L+ E+
Sbjct: 764 VYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSEL 823
Query: 1021 LDEGIKPGMVSYNIMVNVYANAGLHEETEKLFKAMEQDGFLLDSFTYFSLIRAYTQSCKY 1080
LD GI P + + ++VN + G + K+ + M++ + Y ++I + +
Sbjct: 824 LDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNL 843
Query: 1081 SEAEKIINSMQEKGIPTSCAHYDLLLS 1107
+EA ++ + M EKGI ++LL+S
Sbjct: 884 NEAFRLHDEMLEKGIVHDDTVFNLLVS 843
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038900459.1 | 0.0e+00 | 94.02 | pentatricopeptide repeat-containing protein At5g27270 [Benincasa hispida] | [more] |
XP_004140061.1 | 0.0e+00 | 92.06 | pentatricopeptide repeat-containing protein At5g27270 [Cucumis sativus] >KGN4665... | [more] |
XP_008462786.1 | 0.0e+00 | 91.87 | PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g... | [more] |
KAA0042408.1 | 0.0e+00 | 87.24 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |
TYK00992.1 | 0.0e+00 | 89.81 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
O04647 | 0.0e+00 | 55.04 | Pentatricopeptide repeat-containing protein At5g27270 OS=Arabidopsis thaliana OX... | [more] |
Q9SZ52 | 3.4e-47 | 22.70 | Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidop... | [more] |
Q9M907 | 1.1e-45 | 23.50 | Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana OX... | [more] |
Q5G1S8 | 2.1e-44 | 20.95 | Pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Arabidop... | [more] |
O80958 | 4.6e-44 | 23.16 | Pentatricopeptide repeat-containing protein At2g39230, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KE22 | 0.0e+00 | 92.06 | PPR_long domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G118350 PE... | [more] |
A0A1S3CJB8 | 0.0e+00 | 91.87 | LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g27270 OS=Cu... | [more] |
A0A5A7THY4 | 0.0e+00 | 87.24 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A5D3BQE2 | 0.0e+00 | 89.81 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A6J1D3B2 | 0.0e+00 | 88.24 | pentatricopeptide repeat-containing protein At5g27270 OS=Momordica charantia OX=... | [more] |