Clc02G07660 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G07660
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	pathogenesis-related protein-1-like
Location	ClcChr02: 8092453 .. 8093363 (-)
RNA-Seq Expression	Clc02G07660
Synteny	Clc02G07660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTACCAAGTGATATCAAAGATATGCCATTGCTCAAGCTTCTCTCCTTCATAACCCTGATGGGGCTGATAACCCTAGCCCCCATCACCCTGGCTCAAAACTCCCACCAAGACTTCGTCAACGCCCACAACGCTGCCCGAGCTAGGGTCGGTGTCGGGCCCGTCTCTTGGAACTACACCTTGGCAACCTATGCCCAAACTTATGCCAACAAGAAGATTGGCAGTTGTGAGATGAAACATTCGTATGGTCCTTATGGCGAGAATTTAGCCGAAGGGTACGGCGAGATGACGGCAATAGAGGCAGTGAATTTTTGGGTGAGCGAAAAGAAATACTATGACCATAGATCCAACCGGTGCGTCGGGGATGAGTGTCGCCATTACACACAAGTGGTGTGGCGGGACACCAAGCATGTGGGTTGTGCTAGAGTGAAATGTCACAACAATTGGATCTTTGTGATATGCAATTATGATCCTCCTGGCAATTATGTAGGCCAGCTTCCTTACTAAAATTATAAGTGATTGAAAATTTGATGGATCACCCTTTATATATAGTAGAAAGAAAGAAAGATAATGATGTTGTGAGCTTTAGGAATATTATTATGGAAAACTATGATCTTTTCTGGATTTATAATGATATGAATATGCATTATGCATAGACATTATATAATATATATGTTGCTCATCATTGGTCCTACCATTTTTTAAAATTATTTCTTTCGTTCTTACGTTTGAAAACAACGCCCATGGTTCTGACTTTGACAATAGGCCAAAAGTTCAACCCTTATCCCTGGTTTGTACCCCATGGTTAAAAACATTAAACCGATCCAAAGGAAAAGTGTTAGGTCAATTACTTGTTTGATAATCATTTTAGCTTTTGTATTCTGTTTTTGAAAATGAAGCTTATTTCTTTC

mRNA sequence

GTTTTACCAAGTGATATCAAAGATATGCCATTGCTCAAGCTTCTCTCCTTCATAACCCTGATGGGGCTGATAACCCTAGCCCCCATCACCCTGGCTCAAAACTCCCACCAAGACTTCGTCAACGCCCACAACGCTGCCCGAGCTAGGGTCGGTGTCGGGCCCGTCTCTTGGAACTACACCTTGGCAACCTATGCCCAAACTTATGCCAACAAGAAGATTGGCAGTTGTGAGATGAAACATTCGTATGGTCCTTATGGCGAGAATTTAGCCGAAGGGTACGGCGAGATGACGGCAATAGAGGCAGTGAATTTTTGGGTGAGCGAAAAGAAATACTATGACCATAGATCCAACCGGTGCGTCGGGGATGAGTGTCGCCATTACACACAAGTGGTGTGGCGGGACACCAAGCATGTGGGTTGTGCTAGAGTGAAATGTCACAACAATTGGATCTTTGTGATATGCAATTATGATCCTCCTGGCAATTATGTAGGCCAGCTTCCTTACTAAAATTATAAGTGATTGAAAATTTGATGGATCACCCTTTATATATAGTAGAAAGAAAGAAAGATAATGATGTTGTGAGCTTTAGGAATATTATTATGGAAAACTATGATCTTTTCTGGATTTATAATGATATGAATATGCATTATGCATAGACATTATATAATATATATGTTGCTCATCATTGGTCCTACCATTTTTTAAAATTATTTCTTTCGTTCTTACGTTTGAAAACAACGCCCATGGTTCTGACTTTGACAATAGGCCAAAAGTTCAACCCTTATCCCTGGTTTGTACCCCATGGTTAAAAACATTAAACCGATCCAAAGGAAAAGTGTTAGGTCAATTACTTGTTTGATAATCATTTTAGCTTTTGTATTCTGTTTTTGAAAATGAAGCTTATTTCTTTC

Coding sequence (CDS)

ATGCCATTGCTCAAGCTTCTCTCCTTCATAACCCTGATGGGGCTGATAACCCTAGCCCCCATCACCCTGGCTCAAAACTCCCACCAAGACTTCGTCAACGCCCACAACGCTGCCCGAGCTAGGGTCGGTGTCGGGCCCGTCTCTTGGAACTACACCTTGGCAACCTATGCCCAAACTTATGCCAACAAGAAGATTGGCAGTTGTGAGATGAAACATTCGTATGGTCCTTATGGCGAGAATTTAGCCGAAGGGTACGGCGAGATGACGGCAATAGAGGCAGTGAATTTTTGGGTGAGCGAAAAGAAATACTATGACCATAGATCCAACCGGTGCGTCGGGGATGAGTGTCGCCATTACACACAAGTGGTGTGGCGGGACACCAAGCATGTGGGTTGTGCTAGAGTGAAATGTCACAACAATTGGATCTTTGTGATATGCAATTATGATCCTCCTGGCAATTATGTAGGCCAGCTTCCTTACTAA

Protein sequence

MPLLKLLSFITLMGLITLAPITLAQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTYANKKIGSCEMKHSYGPYGENLAEGYGEMTAIEAVNFWVSEKKYYDHRSNRCVGDECRHYTQVVWRDTKHVGCARVKCHNNWIFVICNYDPPGNYVGQLPY

Homology

[Close]

BLAST of Clc02G07660 vs. NCBI nr
Match: XP_038888600.1 (basic form of pathogenesis-related protein 1-like [Benincasa hispida])

HSP 1 Score: 334.0 bits (855), Expect = 7.3e-88
Identity = 150/160 (93.75%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 1   MPLLKLLSFITLMGLITLAPITLAQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTY 60
           MPLLKLLSFITLMG+ITLAPITLAQNSHQDFVNAHNAARA+VGVGPVSWNYTLA YAQTY
Sbjct: 1   MPLLKLLSFITLMGIITLAPITLAQNSHQDFVNAHNAARAKVGVGPVSWNYTLAAYAQTY 60

Query: 61  ANKKIGSCEMKHSYGPYGENLAEGYGEMTAIEAVNFWVSEKKYYDHRSNRCVGDECRHYT 120
           ANKKIG+CE++HSYGPYGENLAEGYGEMTA+EAVNFWVSEKK+YDHRSNRC+GDECRHYT
Sbjct: 61  ANKKIGTCELQHSYGPYGENLAEGYGEMTAVEAVNFWVSEKKFYDHRSNRCIGDECRHYT 120

Query: 121 QVVWRDTKHVGCARVKCHNNWIFVICNYDPPGNYVGQLPY 161
           QVVWR TKHVGCARVKCHNNWIFVICNYDPPGNYVGQLPY
Sbjct: 121 QVVWRGTKHVGCARVKCHNNWIFVICNYDPPGNYVGQLPY 160

[Close]

BLAST of Clc02G07660 vs. NCBI nr
Match: XP_022158625.1 (basic form of pathogenesis-related protein 1-like [Momordica charantia])

HSP 1 Score: 316.6 bits (810), Expect = 1.2e-82
Identity = 143/160 (89.38%), Postives = 152/160 (95.00%), Query Frame = 0


Query: 1   MPLLKLLSFITLMGLITLAPITLAQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTY 60
           M L  LLS ITL+G +TLAP+T+AQNSHQDFVNAHNAARARVGVGPVSWNYTLA YAQTY
Sbjct: 4   MALANLLSAITLLG-VTLAPLTMAQNSHQDFVNAHNAARARVGVGPVSWNYTLAAYAQTY 63

Query: 61  ANKKIGSCEMKHSYGPYGENLAEGYGEMTAIEAVNFWVSEKKYYDHRSNRCVGDECRHYT 120
           ANKKIG+CE++HSYGPYGENL+EGYGEMTA+EAVNFWVSEKKYYDHRSNRCVGDECRHYT
Sbjct: 64  ANKKIGTCELQHSYGPYGENLSEGYGEMTAVEAVNFWVSEKKYYDHRSNRCVGDECRHYT 123

Query: 121 QVVWRDTKHVGCARVKCHNNWIFVICNYDPPGNYVGQLPY 161
           QVVWRDTKHVGCARVKCHNNWIFVICNYDPPGNY GQ PY
Sbjct: 124 QVVWRDTKHVGCARVKCHNNWIFVICNYDPPGNYQGQFPY 162

[Close]

BLAST of Clc02G07660 vs. NCBI nr
Match: XP_008455071.1 (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo] >KAA0031393.1 basic form of pathogenesis-related protein 1-like [Cucumis melo var. makuwa] >TYK06844.1 basic form of pathogenesis-related protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 316.2 bits (809), Expect = 1.6e-82
Identity = 143/160 (89.38%), Postives = 152/160 (95.00%), Query Frame = 0


Query: 1   MPLLKLLSFITLMGLITLAPITLAQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTY 60
           +P L L+SF+ +MGLITLAPITLAQNSHQDFVNAHN ARA+VGVGPVSWNYTLA YAQTY
Sbjct: 3   LPKLLLISFM-MMGLITLAPITLAQNSHQDFVNAHNNARAKVGVGPVSWNYTLAAYAQTY 62

Query: 61  ANKKIGSCEMKHSYGPYGENLAEGYGEMTAIEAVNFWVSEKKYYDHRSNRCVGDECRHYT 120
           ANKKIG+CEM+HSYGPYGENLAEGYGEMTA+EAVNFWVSEKKYYDH SNRC+GDECRHYT
Sbjct: 63  ANKKIGTCEMQHSYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHHSNRCIGDECRHYT 122

Query: 121 QVVWRDTKHVGCARVKCHNNWIFVICNYDPPGNYVGQLPY 161
           QVVWR TKHVGCARVKCHNNWIFVICNYDPPGNYVGQ PY
Sbjct: 123 QVVWRGTKHVGCARVKCHNNWIFVICNYDPPGNYVGQFPY 161

[Close]

BLAST of Clc02G07660 vs. NCBI nr
Match: XP_022988983.1 (basic form of pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 310.5 bits (794), Expect = 8.7e-81
Identity = 142/158 (89.87%), Postives = 148/158 (93.67%), Query Frame = 0


Query: 3   LLKLLSFITLMGLITLAPITLAQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTYAN 62
           L  LLSFI LMGL+ L PITLAQNSHQDFVNAHNAAR+RVGVGPVSWNYTLA YAQTYAN
Sbjct: 4   LANLLSFIALMGLV-LVPITLAQNSHQDFVNAHNAARSRVGVGPVSWNYTLAAYAQTYAN 63

Query: 63  KKIGSCEMKHSYGPYGENLAEGYGEMTAIEAVNFWVSEKKYYDHRSNRCVGDECRHYTQV 122
           KKIG+CEM+HSYGPYGENLAEGYGEMTA+EAVNFWVSEKKYYDHR NRCVGDEC HYTQV
Sbjct: 64  KKIGTCEMQHSYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHRLNRCVGDECGHYTQV 123

Query: 123 VWRDTKHVGCARVKCHNNWIFVICNYDPPGNYVGQLPY 161
           VWR+TKHVGCARVKC NNWIFVICNYDPPGNY GQLPY
Sbjct: 124 VWRNTKHVGCARVKCRNNWIFVICNYDPPGNYAGQLPY 160

[Close]

BLAST of Clc02G07660 vs. NCBI nr
Match: XP_023531814.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308.5 bits (789), Expect = 3.3e-80
Identity = 141/158 (89.24%), Postives = 148/158 (93.67%), Query Frame = 0


Query: 3   LLKLLSFITLMGLITLAPITLAQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTYAN 62
           L  LLSFI LMGL+ L PITLAQNSHQDFVNAHNAAR+RVGVGPVSWNYTLA YAQTYAN
Sbjct: 4   LANLLSFIALMGLV-LVPITLAQNSHQDFVNAHNAARSRVGVGPVSWNYTLAAYAQTYAN 63

Query: 63  KKIGSCEMKHSYGPYGENLAEGYGEMTAIEAVNFWVSEKKYYDHRSNRCVGDECRHYTQV 122
           KKIG+CEM+HSYGPYGENLAEGY EMTA+EAVNFWVSEKKYYDHR NRC+GDEC HYTQV
Sbjct: 64  KKIGTCEMQHSYGPYGENLAEGYREMTAVEAVNFWVSEKKYYDHRLNRCIGDECGHYTQV 123

Query: 123 VWRDTKHVGCARVKCHNNWIFVICNYDPPGNYVGQLPY 161
           VWR+TKHVGCARVKC NNWIFVICNYDPPGNYVGQLPY
Sbjct: 124 VWRNTKHVGCARVKCRNNWIFVICNYDPPGNYVGQLPY 160

[Close]

BLAST of Clc02G07660 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.7e-50
Identity = 82/137 (59.85%), Postives = 106/137 (77.37%), Query Frame = 0


Query: 24  AQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTYANKKIGSCEMKHSYGPYGENLAE 83
           AQNS QD++N HNAAR +VGVGP++W+  LA YAQ YAN++IG C M HS+GPYGENLA 
Sbjct: 23  AQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGMIHSHGPYGENLAA 82

Query: 84  GYGEMTAIEAVNFWVSEKKYYDHRSNRCVGDECRHYTQVVWRDTKHVGCARVKCHNNWIF 143
            + ++ A  AV  WV EK++YD+ SN CVG  C HYTQVVWR++  +GCARV+ +N W F
Sbjct: 83  AFPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVVWRNSVRLGCARVRSNNGWFF 142

Query: 144 VICNYDPPGNYVGQLPY 161
           + CNYDPPGN++GQ P+
Sbjct: 143 ITCNYDPPGNFIGQRPF 159

[Close]

BLAST of Clc02G07660 vs. ExPASy Swiss-Prot
Match: P08299 (Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 6.1e-45
Identity = 88/162 (54.32%), Postives = 113/162 (69.75%), Query Frame = 0


Query: 1   MPLLKLLSFITLMGLITLAPITLAQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTY 60
           +P   L+S  TL+  + ++    AQNS QD+++AHN ARA VGV P++W+  +A YAQ Y
Sbjct: 9   LPSFLLVS--TLLLFLVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNY 68

Query: 61  ANKKIGSCEMKHSYGPYGENLAEGYGE-MTAIEAVNFWVSEKKYYDHRSNRCV-GDECRH 120
           A++    C + HS+G YGENLAEG G+ MTA +AV  WV EK+YYDH SN C  G  C H
Sbjct: 69  ASQLAADCNLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGH 128

Query: 121 YTQVVWRDTKHVGCARVKCHNNWIFVICNYDPPGNYVGQLPY 161
           YTQVVWR++  VGCARV+C+N    V CNYDPPGNY G+ PY
Sbjct: 129 YTQVVWRNSVRVGCARVQCNNGGYVVSCNYDPPGNYRGESPY 168

[Close]

BLAST of Clc02G07660 vs. ExPASy Swiss-Prot
Match: P07053 (Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 6.1e-45
Identity = 88/162 (54.32%), Postives = 113/162 (69.75%), Query Frame = 0


Query: 1   MPLLKLLSFITLMGLITLAPITLAQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTY 60
           MP   L+S  TL+  + ++  + AQNS QD+++AHN ARA VGV P++W+  +A YAQ Y
Sbjct: 9   MPSFFLVS--TLLLFLIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNY 68

Query: 61  ANKKIGSCEMKHSYGPYGENLAEGYGE-MTAIEAVNFWVSEKKYYDHRSNRCV-GDECRH 120
            ++    C + HS+G YGENLA+G G+ MTA +AV  WV EK+YYDH SN C  G  C H
Sbjct: 69  VSQLAADCNLVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGH 128

Query: 121 YTQVVWRDTKHVGCARVKCHNNWIFVICNYDPPGNYVGQLPY 161
           YTQVVWR++  VGCARVKC+N    V CNYDPPGN +GQ PY
Sbjct: 129 YTQVVWRNSVRVGCARVKCNNGGYVVSCNYDPPGNVIGQSPY 168

[Close]

BLAST of Clc02G07660 vs. ExPASy Swiss-Prot
Match: Q08697 (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.5e-43
Identity = 75/133 (56.39%), Postives = 97/133 (72.93%), Query Frame = 0


Query: 24  AQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTYANKKIGSCEMKHSYGPYGENLAE 83
           AQ   ++F+NAHNAAR RVGVGP++W+  LA YAQ YAN++   C M HS GPYGENLA 
Sbjct: 21  AQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDCGMIHSDGPYGENLAA 80

Query: 84  GYGEMTAIEAVNFWVSEKKYYDHRSNRCV-GDECRHYTQVVWRDTKHVGCARVKCHNNWI 143
            + ++ A  AV  W  EK++YD+ SN C  G  C HYTQVVWR +  +GCARV+C++ W+
Sbjct: 81  AFPQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQVVWRKSVRLGCARVRCNSGWV 140

Query: 144 FVICNYDPPGNYV 156
           F+ CNYDPPGNY+
Sbjct: 141 FITCNYDPPGNYI 153

[Close]

BLAST of Clc02G07660 vs. ExPASy Swiss-Prot
Match: Q9ZNS4 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.4e-43
Identity = 79/152 (51.97%), Postives = 107/152 (70.39%), Query Frame = 0


Query: 10  ITLMGLITLAPITL-AQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTYANKKIGSC 69
           I L  L+    + L AQ+S QD+VNAHN AR+++GVGP+ W+  LA YA+ YAN+  G C
Sbjct: 11  IILAALVGALVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDC 70

Query: 70  EMKHSYGPYGENLAEGYGEMTAIEAVNFWVSEKKYYDHRSNRCVGDECRHYTQVVWRDTK 129
            + HS GPYGENLA+  G+++ + AVN WV+EK  Y++ +N C G  C HYTQVVWR++ 
Sbjct: 71  RLVHSRGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTCNG-VCGHYTQVVWRNSV 130

Query: 130 HVGCARVKCHNNWIFVICNYDPPGNYVGQLPY 161
            +GCA+V+C+N    + CNYDPPGNY  Q PY
Sbjct: 131 RLGCAKVRCNNGGTIISCNYDPPGNYANQKPY 161

[Close]

BLAST of Clc02G07660 vs. ExPASy TrEMBL
Match: A0A6J1DWC8 (basic form of pathogenesis-related protein 1-like OS=Momordica charantia OX=3673 GN=LOC111025075 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 5.9e-83
Identity = 143/160 (89.38%), Postives = 152/160 (95.00%), Query Frame = 0


Query: 1   MPLLKLLSFITLMGLITLAPITLAQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTY 60
           M L  LLS ITL+G +TLAP+T+AQNSHQDFVNAHNAARARVGVGPVSWNYTLA YAQTY
Sbjct: 4   MALANLLSAITLLG-VTLAPLTMAQNSHQDFVNAHNAARARVGVGPVSWNYTLAAYAQTY 63

Query: 61  ANKKIGSCEMKHSYGPYGENLAEGYGEMTAIEAVNFWVSEKKYYDHRSNRCVGDECRHYT 120
           ANKKIG+CE++HSYGPYGENL+EGYGEMTA+EAVNFWVSEKKYYDHRSNRCVGDECRHYT
Sbjct: 64  ANKKIGTCELQHSYGPYGENLSEGYGEMTAVEAVNFWVSEKKYYDHRSNRCVGDECRHYT 123

Query: 121 QVVWRDTKHVGCARVKCHNNWIFVICNYDPPGNYVGQLPY 161
           QVVWRDTKHVGCARVKCHNNWIFVICNYDPPGNY GQ PY
Sbjct: 124 QVVWRDTKHVGCARVKCHNNWIFVICNYDPPGNYQGQFPY 162

[Close]

BLAST of Clc02G07660 vs. ExPASy TrEMBL
Match: A0A5A7SMG3 (Basic form of pathogenesis-related protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001480 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 7.7e-83
Identity = 143/160 (89.38%), Postives = 152/160 (95.00%), Query Frame = 0


Query: 1   MPLLKLLSFITLMGLITLAPITLAQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTY 60
           +P L L+SF+ +MGLITLAPITLAQNSHQDFVNAHN ARA+VGVGPVSWNYTLA YAQTY
Sbjct: 3   LPKLLLISFM-MMGLITLAPITLAQNSHQDFVNAHNNARAKVGVGPVSWNYTLAAYAQTY 62

Query: 61  ANKKIGSCEMKHSYGPYGENLAEGYGEMTAIEAVNFWVSEKKYYDHRSNRCVGDECRHYT 120
           ANKKIG+CEM+HSYGPYGENLAEGYGEMTA+EAVNFWVSEKKYYDH SNRC+GDECRHYT
Sbjct: 63  ANKKIGTCEMQHSYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHHSNRCIGDECRHYT 122

Query: 121 QVVWRDTKHVGCARVKCHNNWIFVICNYDPPGNYVGQLPY 161
           QVVWR TKHVGCARVKCHNNWIFVICNYDPPGNYVGQ PY
Sbjct: 123 QVVWRGTKHVGCARVKCHNNWIFVICNYDPPGNYVGQFPY 161

[Close]

BLAST of Clc02G07660 vs. ExPASy TrEMBL
Match: A0A1S3BZM1 (basic form of pathogenesis-related protein 1-like OS=Cucumis melo OX=3656 GN=LOC103495337 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 7.7e-83
Identity = 143/160 (89.38%), Postives = 152/160 (95.00%), Query Frame = 0


Query: 1   MPLLKLLSFITLMGLITLAPITLAQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTY 60
           +P L L+SF+ +MGLITLAPITLAQNSHQDFVNAHN ARA+VGVGPVSWNYTLA YAQTY
Sbjct: 3   LPKLLLISFM-MMGLITLAPITLAQNSHQDFVNAHNNARAKVGVGPVSWNYTLAAYAQTY 62

Query: 61  ANKKIGSCEMKHSYGPYGENLAEGYGEMTAIEAVNFWVSEKKYYDHRSNRCVGDECRHYT 120
           ANKKIG+CEM+HSYGPYGENLAEGYGEMTA+EAVNFWVSEKKYYDH SNRC+GDECRHYT
Sbjct: 63  ANKKIGTCEMQHSYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHHSNRCIGDECRHYT 122

Query: 121 QVVWRDTKHVGCARVKCHNNWIFVICNYDPPGNYVGQLPY 161
           QVVWR TKHVGCARVKCHNNWIFVICNYDPPGNYVGQ PY
Sbjct: 123 QVVWRGTKHVGCARVKCHNNWIFVICNYDPPGNYVGQFPY 161

[Close]

BLAST of Clc02G07660 vs. ExPASy TrEMBL
Match: A0A6J1JNX2 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111486183 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 4.2e-81
Identity = 142/158 (89.87%), Postives = 148/158 (93.67%), Query Frame = 0


Query: 3   LLKLLSFITLMGLITLAPITLAQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTYAN 62
           L  LLSFI LMGL+ L PITLAQNSHQDFVNAHNAAR+RVGVGPVSWNYTLA YAQTYAN
Sbjct: 4   LANLLSFIALMGLV-LVPITLAQNSHQDFVNAHNAARSRVGVGPVSWNYTLAAYAQTYAN 63

Query: 63  KKIGSCEMKHSYGPYGENLAEGYGEMTAIEAVNFWVSEKKYYDHRSNRCVGDECRHYTQV 122
           KKIG+CEM+HSYGPYGENLAEGYGEMTA+EAVNFWVSEKKYYDHR NRCVGDEC HYTQV
Sbjct: 64  KKIGTCEMQHSYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHRLNRCVGDECGHYTQV 123

Query: 123 VWRDTKHVGCARVKCHNNWIFVICNYDPPGNYVGQLPY 161
           VWR+TKHVGCARVKC NNWIFVICNYDPPGNY GQLPY
Sbjct: 124 VWRNTKHVGCARVKCRNNWIFVICNYDPPGNYAGQLPY 160

[Close]

BLAST of Clc02G07660 vs. ExPASy TrEMBL
Match: A0A0A0K4C1 (SCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G070225 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 2.7e-80
Identity = 142/160 (88.75%), Postives = 150/160 (93.75%), Query Frame = 0


Query: 2   PLLKLLSFITLMGLIT-LAPITLAQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTY 61
           P L L+SF+ +MGLIT LA ITLAQNSHQDFVNAHNAARA+VGVGPVSWNYTLA YAQTY
Sbjct: 4   PKLLLISFM-MMGLITQLASITLAQNSHQDFVNAHNAARAKVGVGPVSWNYTLAAYAQTY 63

Query: 62  ANKKIGSCEMKHSYGPYGENLAEGYGEMTAIEAVNFWVSEKKYYDHRSNRCVGDECRHYT 121
           ANKKIG+CEM+HSYGPYGENLAEGYGEMTA+EAVNFWVSEKKYYDH SNRC+GDECRHYT
Sbjct: 64  ANKKIGTCEMQHSYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHHSNRCIGDECRHYT 123

Query: 122 QVVWRDTKHVGCARVKCHNNWIFVICNYDPPGNYVGQLPY 161
           QVVWR TKHVGCARVKCHNNWIFVICNYDPP NYVGQ PY
Sbjct: 124 QVVWRGTKHVGCARVKCHNNWIFVICNYDPPDNYVGQFPY 162

[Close]

BLAST of Clc02G07660 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 177.9 bits (450), Expect = 6.3e-45
Identity = 79/153 (51.63%), Postives = 106/153 (69.28%), Query Frame = 0


Query: 9   FITLMGLITLAPITLAQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTYANKKIGSC 68
           F+ +   + L     AQ+S QDF+  HN ARA VGVGP+ W+  +A YA+ YAN++ G C
Sbjct: 11  FLAITFFLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDC 70

Query: 69  EMKHSYGPYGENLAEGYGEMTAIEAVNFWVSEKKYYDHRSNRCVGD-ECRHYTQVVWRDT 128
            MKHS G YGEN+A   G MT + AV+ WV E+  YD+ SN C  D +C HYTQVVWR++
Sbjct: 71  AMKHSSGSYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNS 130

Query: 129 KHVGCARVKCHNNWIFVICNYDPPGNYVGQLPY 161
           + +GCA+V+C+N   F+ CNYDPPGN+VG+ PY
Sbjct: 131 ERLGCAKVRCNNGQTFITCNYDPPGNWVGEWPY 163

[Close]

BLAST of Clc02G07660 vs. TAIR 10
Match: AT2G19990.1 (pathogenesis-related protein-1-like )

HSP 1 Score: 177.2 bits (448), Expect = 1.1e-44
Identity = 78/134 (58.21%), Postives = 102/134 (76.12%), Query Frame = 0


Query: 29  QDFVNAHNAARARVGVGPVSWNYTLATYAQTYANKKIGSCEMKHSYGPYGENLAEGYGEM 88
           Q+ +  HN ARA VGVGP+ WN TLATYAQ+YA+++   C MKHS GP+GENLA G+G M
Sbjct: 43  QETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGENLAAGWGTM 102

Query: 89  TAIEAVNFWVSEKKYYDHRSNRCVGD-ECRHYTQVVWRDTKHVGCARVKCHNN-WIFVIC 148
           +   A  +W++EK+ YD+ SN C GD  C HYTQ+VWRD+  +GCA V+C N+ +I+VIC
Sbjct: 103 SGPVATEYWMTEKENYDYDSNTCGGDGVCGHYTQIVWRDSVRLGCASVRCKNDEYIWVIC 162

Query: 149 NYDPPGNYVGQLPY 161
           +YDPPGNY+GQ PY
Sbjct: 163 SYDPPGNYIGQRPY 176

[Close]

BLAST of Clc02G07660 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 176.0 bits (445), Expect = 2.4e-44
Identity = 79/152 (51.97%), Postives = 107/152 (70.39%), Query Frame = 0


Query: 10  ITLMGLITLAPITL-AQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTYANKKIGSC 69
           I L  L+    + L AQ+S QD+VNAHN AR+++GVGP+ W+  LA YA+ YAN+  G C
Sbjct: 11  IILAALVGALVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDC 70

Query: 70  EMKHSYGPYGENLAEGYGEMTAIEAVNFWVSEKKYYDHRSNRCVGDECRHYTQVVWRDTK 129
            + HS GPYGENLA+  G+++ + AVN WV+EK  Y++ +N C G  C HYTQVVWR++ 
Sbjct: 71  RLVHSRGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTCNG-VCGHYTQVVWRNSV 130

Query: 130 HVGCARVKCHNNWIFVICNYDPPGNYVGQLPY 161
            +GCA+V+C+N    + CNYDPPGNY  Q PY
Sbjct: 131 RLGCAKVRCNNGGTIISCNYDPPGNYANQKPY 161

[Close]

BLAST of Clc02G07660 vs. TAIR 10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 175.6 bits (444), Expect = 3.1e-44
Identity = 81/154 (52.60%), Postives = 104/154 (67.53%), Query Frame = 0


Query: 9   FITLMGLITLAPITLAQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTYANKKIGSC 68
           F+ ++ +  L   T AQN+ QD++N+HN ARA+VGV  V W+ TLA YA  Y+N +   C
Sbjct: 8   FLVIVAISFLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADC 67

Query: 69  EMKHSYGPYGENLAEG-YGEMTAIEAVNFWVSEKKYYDHRSNRCV-GDECRHYTQVVWRD 128
            + HS GPYGENLA+G     +AI AV  WV EK YY +  N C  G +C HYTQVVWRD
Sbjct: 68  NLVHSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWRD 127

Query: 129 TKHVGCARVKCHNNWIFVICNYDPPGNYVGQLPY 161
           +  +GCARV+C N W FV CNY+ PGN+VG+ PY
Sbjct: 128 SVKIGCARVQCTNTWWFVSCNYNSPGNWVGEYPY 161

[Close]

BLAST of Clc02G07660 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 169.9 bits (429), Expect = 1.7e-42
Identity = 77/155 (49.68%), Postives = 107/155 (69.03%), Query Frame = 0


Query: 6   LLSFITLMGLITLAPITLAQNSHQDFVNAHNAARARVGVGPVSWNYTLATYAQTYANKKI 65
           L+ F+ L+G + L   + AQ+S QD++  HN AR  VGVGP+ W+  +A YA++YA +  
Sbjct: 10  LIVFVALVGALVLP--SKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLR 69

Query: 66  GSCEMKHSYGPYGENLAEGYGEMTAIEAVNFWVSEKKYYDHRSNRCVGDECRHYTQVVWR 125
           G+C + HS GPYGENLA G G+++ + AVN WVSEK  Y++ +N C G  C HYTQVVWR
Sbjct: 70  GNCRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTCNG-VCGHYTQVVWR 129

Query: 126 DTKHVGCARVKCHNNWIFVICNYDPPGNYVGQLPY 161
            +  +GCA+V+C+N    + CNYDP GNYV + PY
Sbjct: 130 KSVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

The following BLAST results are available for this feature:

BLAST of Clc02G07660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888600.1	7.3e-88	93.75	basic form of pathogenesis-related protein 1-like [Benincasa hispida]	[more]
XP_022158625.1	1.2e-82	89.38	basic form of pathogenesis-related protein 1-like [Momordica charantia]	[more]
XP_008455071.1	1.6e-82	89.38	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo] >KAA...	[more]
XP_022988983.1	8.7e-81	89.87	basic form of pathogenesis-related protein 1-like [Cucurbita maxima]	[more]
XP_023531814.1	3.3e-80	89.24	basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc02G07660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P11670	1.7e-50	59.85	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S...	[more]
P08299	6.1e-45	54.32	Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1	[more]
P07053	6.1e-45	54.32	Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
Q08697	1.5e-43	56.39	Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
Q9ZNS4	3.4e-43	51.97	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1	[more]

BLAST of Clc02G07660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWC8	5.9e-83	89.38	basic form of pathogenesis-related protein 1-like OS=Momordica charantia OX=3673...	[more]
A0A5A7SMG3	7.7e-83	89.38	Basic form of pathogenesis-related protein 1-like OS=Cucumis melo var. makuwa OX...	[more]
A0A1S3BZM1	7.7e-83	89.38	basic form of pathogenesis-related protein 1-like OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1JNX2	4.2e-81	89.87	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A0A0K4C1	2.7e-80	88.75	SCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G070225 PE=4 SV...	[more]

BLAST of Clc02G07660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33720.1	6.3e-45	51.63	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G19990.1	1.1e-44	58.21	pathogenesis-related protein-1-like	[more]
AT2G14580.1	2.4e-44	51.97	basic pathogenesis-related protein 1	[more]
AT1G50060.1	3.1e-44	52.60	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14610.1	1.7e-42	49.68	pathogenesis-related gene 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein-related	PRINTS	PR00837	V5TPXLIKE	coord: 47..65 score: 38.23 coord: 93..106 score: 39.77 coord: 116..132 score: 57.46 coord: 143..156 score: 55.71
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 22..160
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 26..156 e-value: 1.8E-54 score: 196.9
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 32..148 e-value: 2.7E-22 score: 79.9
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 25..160 e-value: 2.5E-44 score: 152.9
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 11..160
None	No IPR available	PANTHER	PTHR10334:SF488	PATHOGENESIS-RELATED PROTEIN 1	coord: 22..160
None	No IPR available	CDD	cd05381	CAP_PR-1	coord: 29..160 e-value: 4.3934E-81 score: 233.68
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 117..127
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 143..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G07660.1	Clc02G07660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005615	extracellular space
cellular_component	GO:0005576	extracellular region