Clc02G07600 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G07600
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	pathogenesis-related protein-1-like
Location	ClcChr02: 8010480 .. 8011940 (+)
RNA-Seq Expression	Clc02G07600
Synteny	Clc02G07600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCACCAAGATGCATAGAAATATACGAGAACCATCAGGCAAACCAAGAAAGGTCACCATTGAGTCCAGTGTTTGGAAAACAGCTGAATCAATAATCCGTTCATATTGTAGAGAAGAAGAACAAATGACATTAGGACATAGGAGGCATTTGTGGGAGTGGTTTTGAGAAATGGTTAAAATTACTTTTGACATTATTAAAATAACTTCGAAATATGATTTTAGTCATTAAAAATCAATTTTGACGAAATGAAAATTGCATTTAAAAGTTTAAAAATAGATATTAAATTTGTATTGATTGATTAAATGCATATTTTAGAGCGATTTTGAACATGTTTAGTGTTCTTTAAACAATTTCAAAGTCACTCCCAAAATCATTCTTAGGGACTTTTATTTTTTACCATTTTACTAAAAATTCAATTGTTATTTAAGAGAAGTTGAAAACTACAAAGAAACAAGCAAAATTTTGGACAGTATAAAATAAAAATGAAATTGTTATCAATCTAAGGCTTTAACTCTTTAAATAAAGGTTATCAGTGTATTAGTTCATGGTTTCTTTATGTCATTCATGGTGATCTGTTATGTTTTTTCGCTATATTTACAAATTAATTTTGAAAAGAATTATTGTTAAATTTGTAAATTTAAAAAATGTTTTTTTCTATTCTTGCAAATACTTCAAAAGAATTATTGTTCAATGGTAGCTATTACATCATGGATATTCAATAATATATTTAATAACGTAAATTGTGAACCACATTAGTTTTACAAGAAAGATTTAAGAATTAATATATTTACCATCCACACAATATTGTTAAATTACGGAGGAATTGACGGAATTTCAATGTGCCTCCACTTTTGTCTCTTGATGTATTTCTATTATCCCAACAAAACAACTAAAACAGAACCACATGATTTGATCTTCTTATATAAATACCCAAAAGCGAACACAAATGTCCTAAACCAAACTCAACATACCAATCCTTCAATTAACCTTCCTTTATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACAATCTTAAGATGGCATTTACTAACTCTCTCTCCACATTTTGTTTTGTGGGACTAGCTCTAATTTTAGCTTCAATATCTCCCACGGTGCGGAAAGCAGCCCCCAGGACTTCGTCGATGCCCACAATGCCATCCGTGCCGAGTACGGCGTCGGACCGGTCACTTGGAACAAAACCTTGGCTGAGTATGCTAAAAATTACGCCGAAACGAAGATCGCTACCTGCGAGATGGAGCATTCTATGGGACCTTATGGCGAAAACTTGGCTGAAGCATTTGAAACGACAACAGCAGAATTGACAGTGAACTATGGGGCTAGTGAGAAGAAATTTTACGATCACGAATCAAACAAGTGCGTCAAGGGAAGAGTGCGGCCATTTCCTTCAAGTCGTGTGGAAGGACACGAAAATGATTGGTTGCGCTGA

mRNA sequence

ATGCCACCAAGATGCATAGAAATATACGAGAACCATCAGGCAAACCAAGAAAGCTCTAATTTTAGCTTCAATATCTCCCACGGTGCGGAAAGCAGCCCCCAGGACTTCGTCGATGCCCACAATGCCATCCGTGCCGAGTACGGCGTCGGACCGGTCACTTGGAACAAAACCTTGGCTGAGTATGCTAAAAATTACGCCGAAACGAAGATCGCTACCTGCGAGATGGAGCATTCTATGGGACCTTATGGCGAAAACTTGGCTGAAGCATTTGAAACGACAACAGCAGAATTGACAGTGAACTATGGGGCTAGTGAGAAGAAATTTTACGATCACGAATCAAACAAGTGCGTCAAGGGAAGAGTGCGGCCATTTCCTTCAAGTCGTGTGGAAGGACACGAAAATGATTGGTTGCGCTGA

Coding sequence (CDS)

ATGCCACCAAGATGCATAGAAATATACGAGAACCATCAGGCAAACCAAGAAAGCTCTAATTTTAGCTTCAATATCTCCCACGGTGCGGAAAGCAGCCCCCAGGACTTCGTCGATGCCCACAATGCCATCCGTGCCGAGTACGGCGTCGGACCGGTCACTTGGAACAAAACCTTGGCTGAGTATGCTAAAAATTACGCCGAAACGAAGATCGCTACCTGCGAGATGGAGCATTCTATGGGACCTTATGGCGAAAACTTGGCTGAAGCATTTGAAACGACAACAGCAGAATTGACAGTGAACTATGGGGCTAGTGAGAAGAAATTTTACGATCACGAATCAAACAAGTGCGTCAAGGGAAGAGTGCGGCCATTTCCTTCAAGTCGTGTGGAAGGACACGAAAATGATTGGTTGCGCTGA

Protein sequence

MPPRCIEIYENHQANQESSNFSFNISHGAESSPQDFVDAHNAIRAEYGVGPVTWNKTLAEYAKNYAETKIATCEMEHSMGPYGENLAEAFETTTAELTVNYGASEKKFYDHESNKCVKGRVRPFPSSRVEGHENDWLR

Homology

[Close]

BLAST of Clc02G07600 vs. NCBI nr
Match: XP_038888848.1 (basic form of pathogenesis-related protein 1-like [Benincasa hispida] >XP_038888868.1 basic form of pathogenesis-related protein 1-like [Benincasa hispida])

HSP 1 Score: 174.1 bits (440), Expect = 8.4e-40
Identity = 81/90 (90.00%), Postives = 88/90 (97.78%), Query Frame = 0


Query: 29  AESSPQDFVDAHNAIRAEYGVGPVTWNKTLAEYAKNYAETKIATCEMEHSMGPYGENLAE 88
           A+SSPQDFVDAHNAIRAEYGVGPVTWNKTLAEYA+ YAET+IATCEMEHSMGPYGENLAE
Sbjct: 28  AKSSPQDFVDAHNAIRAEYGVGPVTWNKTLAEYAQKYAETRIATCEMEHSMGPYGENLAE 87

Query: 89  AFETTTAELTVNYGASEKKFYDHESNKCVK 119
           AFETTTAELTVNY ASEKKFY+H++NKCV+
Sbjct: 88  AFETTTAELTVNYWASEKKFYNHQANKCVE 117

[Close]

BLAST of Clc02G07600 vs. NCBI nr
Match: XP_008455070.1 (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo] >KAA0031392.1 basic form of pathogenesis-related protein 1-like [Cucumis melo var. makuwa] >TYK06843.1 basic form of pathogenesis-related protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 166.4 bits (420), Expect = 1.7e-37
Identity = 76/90 (84.44%), Postives = 86/90 (95.56%), Query Frame = 0


Query: 29  AESSPQDFVDAHNAIRAEYGVGPVTWNKTLAEYAKNYAETKIATCEMEHSMGPYGENLAE 88
           A+SSPQ+FVDAHNAIRA+YGVGPVTWNKTLA YA+NYA+T++ATCEMEHSMGPYGENLAE
Sbjct: 28  AKSSPQEFVDAHNAIRAKYGVGPVTWNKTLASYAENYAKTRVATCEMEHSMGPYGENLAE 87

Query: 89  AFETTTAELTVNYGASEKKFYDHESNKCVK 119
           AFE TTAELTVNY A+E KFYDH+SNKCV+
Sbjct: 88  AFEKTTAELTVNYWATEDKFYDHKSNKCVE 117

[Close]

BLAST of Clc02G07600 vs. NCBI nr
Match: XP_004137079.1 (basic form of pathogenesis-related protein 1 [Cucumis sativus] >KGN43825.1 hypothetical protein Csa_017105 [Cucumis sativus])

HSP 1 Score: 164.1 bits (414), Expect = 8.7e-37
Identity = 76/90 (84.44%), Postives = 83/90 (92.22%), Query Frame = 0


Query: 29  AESSPQDFVDAHNAIRAEYGVGPVTWNKTLAEYAKNYAETKIATCEMEHSMGPYGENLAE 88
           A S+PQDFVDAHNAIRA+YGVGPVTWNKT+A YA+ YA+TK ATCEMEHSMGPYGENLAE
Sbjct: 28  ANSTPQDFVDAHNAIRAKYGVGPVTWNKTIASYAEKYAKTKTATCEMEHSMGPYGENLAE 87

Query: 89  AFETTTAELTVNYGASEKKFYDHESNKCVK 119
           AFE TTAELTVNY ASE KFYDH+SNKCV+
Sbjct: 88  AFEKTTAELTVNYWASEDKFYDHKSNKCVE 117

[Close]

BLAST of Clc02G07600 vs. NCBI nr
Match: XP_022148832.1 (basic form of pathogenesis-related protein 1-like [Momordica charantia])

HSP 1 Score: 154.1 bits (388), Expect = 9.0e-34
Identity = 69/89 (77.53%), Postives = 82/89 (92.13%), Query Frame = 0


Query: 29  AESSPQDFVDAHNAIRAEYGVGPVTWNKTLAEYAKNYAETKIATCEMEHSMGPYGENLAE 88
           A+SSP+DFVDAHN IRAEYGVGPV WN TLA+YA+N+A+T++ TCEMEHSMGPYGE+LAE
Sbjct: 30  AKSSPKDFVDAHNTIRAEYGVGPVAWNTTLADYAENFAKTRVDTCEMEHSMGPYGESLAE 89

Query: 89  AFETTTAELTVNYGASEKKFYDHESNKCV 118
           AFE+TTAE TV Y ASEK+FYDH++NKCV
Sbjct: 90  AFESTTAEATVKYWASEKEFYDHKANKCV 118

[Close]

BLAST of Clc02G07600 vs. NCBI nr
Match: XP_022158630.1 (basic form of pathogenesis-related protein 1-like [Momordica charantia])

HSP 1 Score: 143.7 bits (361), Expect = 1.2e-30
Identity = 66/96 (68.75%), Postives = 80/96 (83.33%), Query Frame = 0


Query: 29  AESSPQDFVDAHNAIRAEYGVGPVTWNKTLAEYAKNYAETKIATCEMEHSMGPYGENLAE 88
           A S+PQ++V  HNAIRA+YGVGPVTWN+TLA+YA+NYA +K ATCEM+HS GPYGENL E
Sbjct: 23  AYSTPQEYVAIHNAIRAQYGVGPVTWNQTLADYAQNYANSKYATCEMKHSGGPYGENLLE 82

Query: 89  AFETTTAELTVNYGASEKKFYDHESNKCVKGRVRPF 125
           A+ETT+AELTV + ASE KFYD+ +NKCV G    F
Sbjct: 83  AYETTSAELTVKFWASESKFYDYNANKCVGGECGHF 118

[Close]

BLAST of Clc02G07600 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.7e-22
Identity = 50/94 (53.19%), Postives = 62/94 (65.96%), Query Frame = 0


Query: 26  SHGAESSPQDFVDAHNAIRAEYGVGPVTWNKTLAEYAKNYAETKIATCEMEHSMGPYGEN 85
           S  A++SPQD+++ HNA R + GVGP+TW+  LA YA+NYA  +I  C M HS GPYGEN
Sbjct: 20  SSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGMIHSHGPYGEN 79

Query: 86  LAEAFETTTAELTVNYGASEKKFYDHESNKCVKG 120
           LA AF    A   V     EK+FYD+ SN CV G
Sbjct: 80  LAAAFPQLNAAGAVKMWVDEKRFYDYNSNSCVGG 113

[Close]

BLAST of Clc02G07600 vs. ExPASy Swiss-Prot
Match: P08299 (Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.0e-19
Identity = 49/100 (49.00%), Postives = 66/100 (66.00%), Query Frame = 0


Query: 25  ISHG--AESSPQDFVDAHNAIRAEYGVGPVTWNKTLAEYAKNYAETKIATCEMEHSMGPY 84
           ISH   A++S QD++DAHN  RA+ GV P+TW+  +A YA+NYA    A C + HS G Y
Sbjct: 24  ISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADCNLVHSHGQY 83

Query: 85  GENLAE-AFETTTAELTVNYGASEKKFYDHESNKCVKGRV 122
           GENLAE + +  TA   V     EK++YDH+SN C +G+V
Sbjct: 84  GENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQV 123

[Close]

BLAST of Clc02G07600 vs. ExPASy Swiss-Prot
Match: P07053 (Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 6.5e-19
Identity = 47/100 (47.00%), Postives = 65/100 (65.00%), Query Frame = 0


Query: 25  ISHG--AESSPQDFVDAHNAIRAEYGVGPVTWNKTLAEYAKNYAETKIATCEMEHSMGPY 84
           ISH   A++S QD++DAHN  RA+ GV P+TW+  +A YA+NY     A C + HS G Y
Sbjct: 24  ISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQLAADCNLVHSHGQY 83

Query: 85  GENLAE-AFETTTAELTVNYGASEKKFYDHESNKCVKGRV 122
           GENLA+ + +  TA   V     EK++YDH+SN C +G+V
Sbjct: 84  GENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQV 123

[Close]

BLAST of Clc02G07600 vs. ExPASy Swiss-Prot
Match: Q08697 (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.4e-18
Identity = 46/96 (47.92%), Postives = 60/96 (62.50%), Query Frame = 0


Query: 26  SHGAESSPQDFVDAHNAIRAEYGVGPVTWNKTLAEYAKNYAETKIATCEMEHSMGPYGEN 85
           S  A++  ++F++AHNA R   GVGP+TW+  LA YA+NYA  +   C M HS GPYGEN
Sbjct: 18  SSQAQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDCGMIHSDGPYGEN 77

Query: 86  LAEAFETTTAELTVNYGASEKKFYDHESNKCVKGRV 122
           LA AF    A   V     EK++YD+ SN C  G+V
Sbjct: 78  LAAAFPQLNAAGAVKMWDDEKQWYDYNSNTCAPGKV 113

[Close]

BLAST of Clc02G07600 vs. ExPASy Swiss-Prot
Match: P09042 (Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3)

HSP 1 Score: 92.4 bits (228), Expect = 4.2e-18
Identity = 47/100 (47.00%), Postives = 65/100 (65.00%), Query Frame = 0


Query: 25  ISHG--AESSPQDFVDAHNAIRAEYGVGPVTWNKTLAEYAKNYAETKIATCEMEHSMGPY 84
           ISH   A++S QD++DAHN  RA+ GV P+TW+  +A YA+NYA    A C + HS G Y
Sbjct: 24  ISHSCHAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADCNLVHSHGQY 83

Query: 85  GENLA-EAFETTTAELTVNYGASEKKFYDHESNKCVKGRV 122
           GENLA  + +  TA   V    +EK++Y H+SN C +G+V
Sbjct: 84  GENLAWGSGDFLTAAKAVEMWVNEKQYYAHDSNTCAQGQV 123

[Close]

BLAST of Clc02G07600 vs. ExPASy TrEMBL
Match: A0A5D3C4I8 (Basic form of pathogenesis-related protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001470 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 8.5e-38
Identity = 76/90 (84.44%), Postives = 86/90 (95.56%), Query Frame = 0


Query: 29  AESSPQDFVDAHNAIRAEYGVGPVTWNKTLAEYAKNYAETKIATCEMEHSMGPYGENLAE 88
           A+SSPQ+FVDAHNAIRA+YGVGPVTWNKTLA YA+NYA+T++ATCEMEHSMGPYGENLAE
Sbjct: 28  AKSSPQEFVDAHNAIRAKYGVGPVTWNKTLASYAENYAKTRVATCEMEHSMGPYGENLAE 87

Query: 89  AFETTTAELTVNYGASEKKFYDHESNKCVK 119
           AFE TTAELTVNY A+E KFYDH+SNKCV+
Sbjct: 88  AFEKTTAELTVNYWATEDKFYDHKSNKCVE 117

[Close]

BLAST of Clc02G07600 vs. ExPASy TrEMBL
Match: A0A1S3C197 (basic form of pathogenesis-related protein 1-like OS=Cucumis melo OX=3656 GN=LOC103495335 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 8.5e-38
Identity = 76/90 (84.44%), Postives = 86/90 (95.56%), Query Frame = 0


Query: 29  AESSPQDFVDAHNAIRAEYGVGPVTWNKTLAEYAKNYAETKIATCEMEHSMGPYGENLAE 88
           A+SSPQ+FVDAHNAIRA+YGVGPVTWNKTLA YA+NYA+T++ATCEMEHSMGPYGENLAE
Sbjct: 28  AKSSPQEFVDAHNAIRAKYGVGPVTWNKTLASYAENYAKTRVATCEMEHSMGPYGENLAE 87

Query: 89  AFETTTAELTVNYGASEKKFYDHESNKCVK 119
           AFE TTAELTVNY A+E KFYDH+SNKCV+
Sbjct: 88  AFEKTTAELTVNYWATEDKFYDHKSNKCVE 117

[Close]

BLAST of Clc02G07600 vs. ExPASy TrEMBL
Match: A0A0A0K2C5 (SCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G070230 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 4.2e-37
Identity = 76/90 (84.44%), Postives = 83/90 (92.22%), Query Frame = 0


Query: 29  AESSPQDFVDAHNAIRAEYGVGPVTWNKTLAEYAKNYAETKIATCEMEHSMGPYGENLAE 88
           A S+PQDFVDAHNAIRA+YGVGPVTWNKT+A YA+ YA+TK ATCEMEHSMGPYGENLAE
Sbjct: 28  ANSTPQDFVDAHNAIRAKYGVGPVTWNKTIASYAEKYAKTKTATCEMEHSMGPYGENLAE 87

Query: 89  AFETTTAELTVNYGASEKKFYDHESNKCVK 119
           AFE TTAELTVNY ASE KFYDH+SNKCV+
Sbjct: 88  AFEKTTAELTVNYWASEDKFYDHKSNKCVE 117

[Close]

BLAST of Clc02G07600 vs. ExPASy TrEMBL
Match: A0A6J1D642 (basic form of pathogenesis-related protein 1-like OS=Momordica charantia OX=3673 GN=LOC111017391 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 4.3e-34
Identity = 69/89 (77.53%), Postives = 82/89 (92.13%), Query Frame = 0


Query: 29  AESSPQDFVDAHNAIRAEYGVGPVTWNKTLAEYAKNYAETKIATCEMEHSMGPYGENLAE 88
           A+SSP+DFVDAHN IRAEYGVGPV WN TLA+YA+N+A+T++ TCEMEHSMGPYGE+LAE
Sbjct: 30  AKSSPKDFVDAHNTIRAEYGVGPVAWNTTLADYAENFAKTRVDTCEMEHSMGPYGESLAE 89

Query: 89  AFETTTAELTVNYGASEKKFYDHESNKCV 118
           AFE+TTAE TV Y ASEK+FYDH++NKCV
Sbjct: 90  AFESTTAEATVKYWASEKEFYDHKANKCV 118

[Close]

BLAST of Clc02G07600 vs. ExPASy TrEMBL
Match: A0A6J1D417 (basic form of pathogenesis-related protein 1-like OS=Momordica charantia OX=3673 GN=LOC111017389 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 5.9e-31
Identity = 66/96 (68.75%), Postives = 80/96 (83.33%), Query Frame = 0


Query: 29  AESSPQDFVDAHNAIRAEYGVGPVTWNKTLAEYAKNYAETKIATCEMEHSMGPYGENLAE 88
           A S+PQ++V  HNAIRA+YGVGPVTWN+TLA+YA+NYA +K ATCEM+HS GPYGENL E
Sbjct: 23  AYSTPQEYVAIHNAIRAQYGVGPVTWNQTLADYAQNYANSKYATCEMKHSGGPYGENLLE 82

Query: 89  AFETTTAELTVNYGASEKKFYDHESNKCVKGRVRPF 125
           A+ETT+AELTV + ASE KFYD+ +NKCV G    F
Sbjct: 83  AYETTSAELTVKFWASESKFYDYNANKCVGGECGHF 118

[Close]

BLAST of Clc02G07600 vs. TAIR 10
Match: AT2G19990.1 (pathogenesis-related protein-1-like )

HSP 1 Score: 90.9 bits (224), Expect = 8.7e-19
Identity = 39/84 (46.43%), Postives = 56/84 (66.67%), Query Frame = 0


Query: 33  PQDFVDAHNAIRAEYGVGPVTWNKTLAEYAKNYAETKIATCEMEHSMGPYGENLAEAFET 92
           PQ+ +  HN  RA  GVGP+ WN+TLA YA++YA  +   C M+HS+GP+GENLA  + T
Sbjct: 42  PQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGENLAAGWGT 101

Query: 93  TTAELTVNYGASEKKFYDHESNKC 117
            +  +   Y  +EK+ YD++SN C
Sbjct: 102 MSGPVATEYWMTEKENYDYDSNTC 125

[Close]

BLAST of Clc02G07600 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 87.4 bits (215), Expect = 9.6e-18
Identity = 40/88 (45.45%), Postives = 56/88 (63.64%), Query Frame = 0


Query: 29  AESSPQDFVDAHNAIRAEYGVGPVTWNKTLAEYAKNYAETKIATCEMEHSMGPYGENLAE 88
           A+ SPQDF+  HN  RAE GVGP+ W++ +A YA+NYA  +   C M+HS G YGEN+A 
Sbjct: 26  AQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSSGSYGENIAW 85

Query: 89  AFETTTAELTVNYGASEKKFYDHESNKC 117
           +  + T    V+    E+  YD++SN C
Sbjct: 86  SSGSMTGVAAVDMWVDEQFDYDYDSNTC 113

[Close]

BLAST of Clc02G07600 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 86.3 bits (212), Expect = 2.1e-17
Identity = 39/88 (44.32%), Postives = 57/88 (64.77%), Query Frame = 0


Query: 29  AESSPQDFVDAHNAIRAEYGVGPVTWNKTLAEYAKNYAETKIATCEMEHSMGPYGENLAE 88
           A+ S QD+V+AHN  R++ GVGP+ W++ LA YA+NYA      C + HS GPYGENLA+
Sbjct: 26  AQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAK 85

Query: 89  AFETTTAELTVNYGASEKKFYDHESNKC 117
           +    +    VN   +EK  Y++++N C
Sbjct: 86  SGGDLSGVAAVNLWVNEKANYNYDTNTC 113

[Close]

BLAST of Clc02G07600 vs. TAIR 10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 83.2 bits (204), Expect = 1.8e-16
Identity = 38/97 (39.18%), Postives = 61/97 (62.89%), Query Frame = 0


Query: 25  ISHGAESSPQDFVDAHNAIRAEYGVGPVTWNKTLAEYAKNYAETKIATCEMEHSMGPYGE 84
           ++  A+++PQD++++HN  RA+ GV  V W+ TLA YA NY+  + A C + HS GPYGE
Sbjct: 19  VATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLVHSNGPYGE 78

Query: 85  NLAEAFETTTAELT-VNYGASEKKFYDHESNKCVKGR 121
           NLA+   ++ + ++ V     EK +Y +  N C  G+
Sbjct: 79  NLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGK 115

[Close]

BLAST of Clc02G07600 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 80.5 bits (197), Expect = 1.2e-15
Identity = 38/88 (43.18%), Postives = 52/88 (59.09%), Query Frame = 0


Query: 29  AESSPQDFVDAHNAIRAEYGVGPVTWNKTLAEYAKNYAETKIATCEMEHSMGPYGENLAE 88
           A+ SPQD++  HN  R   GVGP+ W++ +A YA++YAE     C + HS GPYGENLA 
Sbjct: 26  AQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPYGENLAW 85

Query: 89  AFETTTAELTVNYGASEKKFYDHESNKC 117
                +    VN   SEK  Y++ +N C
Sbjct: 86  GSGDLSGVSAVNMWVSEKANYNYAANTC 113

The following BLAST results are available for this feature:

BLAST of Clc02G07600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888848.1	8.4e-40	90.00	basic form of pathogenesis-related protein 1-like [Benincasa hispida] >XP_038888...	[more]
XP_008455070.1	1.7e-37	84.44	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo] >KAA...	[more]
XP_004137079.1	8.7e-37	84.44	basic form of pathogenesis-related protein 1 [Cucumis sativus] >KGN43825.1 hypot...	[more]
XP_022148832.1	9.0e-34	77.53	basic form of pathogenesis-related protein 1-like [Momordica charantia]	[more]
XP_022158630.1	1.2e-30	68.75	basic form of pathogenesis-related protein 1-like [Momordica charantia]	[more]

BLAST of Clc02G07600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P11670	3.7e-22	53.19	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S...	[more]
P08299	1.0e-19	49.00	Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1	[more]
P07053	6.5e-19	47.00	Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
Q08697	1.4e-18	47.92	Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P09042	4.2e-18	47.00	Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3	[more]

BLAST of Clc02G07600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C4I8	8.5e-38	84.44	Basic form of pathogenesis-related protein 1-like OS=Cucumis melo var. makuwa OX...	[more]
A0A1S3C197	8.5e-38	84.44	basic form of pathogenesis-related protein 1-like OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A0A0K2C5	4.2e-37	84.44	SCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G070230 PE=4 SV...	[more]
A0A6J1D642	4.3e-34	77.53	basic form of pathogenesis-related protein 1-like OS=Momordica charantia OX=3673...	[more]
A0A6J1D417	5.9e-31	68.75	basic form of pathogenesis-related protein 1-like OS=Momordica charantia OX=3673...	[more]

BLAST of Clc02G07600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19990.1	8.7e-19	46.43	pathogenesis-related protein-1-like	[more]
AT4G33720.1	9.6e-18	45.45	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14580.1	2.1e-17	44.32	basic pathogenesis-related protein 1	[more]
AT1G50060.1	1.8e-16	39.18	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14610.1	1.2e-15	43.18	pathogenesis-related gene 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 31..131 e-value: 2.7E-9 score: 39.9
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 37..118 e-value: 2.3E-8 score: 34.9
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 12..128 e-value: 2.6E-18 score: 68.6
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 32..119
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 25..120
None	No IPR available	PANTHER	PTHR10334:SF437	BASIC FORM OF PATHOGENESIS-RELATED PROTEIN 1-LIKE	coord: 25..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G07600.1	Clc02G07600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005615	extracellular space