Clc02G07550 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G07550
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Pathogenesis-related protein-1-like protein
Location	ClcChr02: 7953071 .. 7953978 (-)
RNA-Seq Expression	Clc02G07550
Synteny	Clc02G07550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATAATGTCCCATTATTTGAATGAAAAAAAATGCGACAAACAATAGAAAATTACCATCTCTCTTTTATTTTGTCTCATCTTCTTTTCTTTTCTCTTTAAACAATCCCCCAACTACAAATGCAAACCACTAACCCACCATCCCTTCCTTTCTCCACTCCTTCTCTATAAATATCCTTTACCACATACACCAAATCTCCACCACCAAATACAAAAGAATATTCTCCTCCTAACTCCTCCAAAACCCCCCCTCGAAAATGGCTTCCCCCACCATTTTTTTCTCTACCATATGTTTGGTAGGTTTCCTCCTTGCTACCATCTCCAAGGCCCAAAACGATCCCCAAGACTTTGTCGATACCCATAACGTCATTCGAGCAGCGGTTGGTGTCGGGCCAGTCTCTTGGGATGACACTCTAGCCACCTATGCTCAAAATTACGCTGATAGTAAGATCGATACCTGTGAGATGGAGCACTCCAATGGACCCTACGGTGAAAACCTCGCAGAGGGGTATGACGAGATGACGGCGGTGGAGGCGGTGAAGTTTTGGGCGACCGAGAAAAAGTTCTACAACCACCATTTGAACCGGTGCATCGGGGATGAGTGTGGCCACTATACGCAAATAGTGTGGAGGGACACTAAAAACATAGGGTGTGCTAGGGTGAAGTGTGAGAACAATTGGGTTTTTGTGATATGCAACTATAATCCTCCGGGGAACTATATAGGCCAACATCCTTACTAAAATCTAAGTACAAGAGTATAAAAGTTGTGACTTCAGAAAGATTTATATGATGTTGTTATTGAAAATATGGTGCATTTTTATTTGCATCTATGTATAAGAATATTAAATAGTTACATGAAATATATATATATGTATATGAGTTATTTATATGTCCAATTTGTTTTTTTTTTT

mRNA sequence

CATAATGTCCCATTATTTGAATGAAAAAAAATGCGACAAACAATAGAAAATTACCATCTCTCTTTTATTTTGTCTCATCTTCTTTTCTTTTCTCTTTAAACAATCCCCCAACTACAAATGCAAACCACTAACCCACCATCCCTTCCTTTCTCCACTCCTTCTCTATAAATATCCTTTACCACATACACCAAATCTCCACCACCAAATACAAAAGAATATTCTCCTCCTAACTCCTCCAAAACCCCCCCTCGAAAATGGCTTCCCCCACCATTTTTTTCTCTACCATATGTTTGGTAGGTTTCCTCCTTGCTACCATCTCCAAGGCCCAAAACGATCCCCAAGACTTTGTCGATACCCATAACGTCATTCGAGCAGCGGTTGGTGTCGGGCCAGTCTCTTGGGATGACACTCTAGCCACCTATGCTCAAAATTACGCTGATAGTAAGATCGATACCTGTGAGATGGAGCACTCCAATGGACCCTACGGTGAAAACCTCGCAGAGGGGTATGACGAGATGACGGCGGTGGAGGCGGTGAAGTTTTGGGCGACCGAGAAAAAGTTCTACAACCACCATTTGAACCGGTGCATCGGGGATGAGTGTGGCCACTATACGCAAATAGTGTGGAGGGACACTAAAAACATAGGGTGTGCTAGGGTGAAGTGTGAGAACAATTGGGTTTTTGTGATATGCAACTATAATCCTCCGGGGAACTATATAGGCCAACATCCTTACTAAAATCTAAGTACAAGAGTATAAAAGTTGTGACTTCAGAAAGATTTATATGATGTTGTTATTGAAAATATGGTGCATTTTTATTTGCATCTATGTATAAGAATATTAAATAGTTACATGAAATATATATATATGTATATGAGTTATTTATATGTCCAATTTGTTTTTTTTTTT

Coding sequence (CDS)

ATGGCTTCCCCCACCATTTTTTTCTCTACCATATGTTTGGTAGGTTTCCTCCTTGCTACCATCTCCAAGGCCCAAAACGATCCCCAAGACTTTGTCGATACCCATAACGTCATTCGAGCAGCGGTTGGTGTCGGGCCAGTCTCTTGGGATGACACTCTAGCCACCTATGCTCAAAATTACGCTGATAGTAAGATCGATACCTGTGAGATGGAGCACTCCAATGGACCCTACGGTGAAAACCTCGCAGAGGGGTATGACGAGATGACGGCGGTGGAGGCGGTGAAGTTTTGGGCGACCGAGAAAAAGTTCTACAACCACCATTTGAACCGGTGCATCGGGGATGAGTGTGGCCACTATACGCAAATAGTGTGGAGGGACACTAAAAACATAGGGTGTGCTAGGGTGAAGTGTGAGAACAATTGGGTTTTTGTGATATGCAACTATAATCCTCCGGGGAACTATATAGGCCAACATCCTTACTAA

Protein sequence

MASPTIFFSTICLVGFLLATISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQNYADSKIDTCEMEHSNGPYGENLAEGYDEMTAVEAVKFWATEKKFYNHHLNRCIGDECGHYTQIVWRDTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY

Homology

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BLAST of Clc02G07550 vs. NCBI nr
Match: XP_038888452.1 (basic form of pathogenesis-related protein 1-like [Benincasa hispida])

HSP 1 Score: 337.0 bits (863), Expect = 8.7e-89
Identity = 149/160 (93.12%), Postives = 154/160 (96.25%), Query Frame = 0


Query: 1   MASPTIFFSTICLVGFLLATISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQNY 60
           MASPTI  ST+CLV F LATISKAQN PQDFVDTHN++RAAVGVGPVSWDDTLA YAQNY
Sbjct: 1   MASPTIILSTMCLVSFFLATISKAQNSPQDFVDTHNIVRAAVGVGPVSWDDTLAAYAQNY 60

Query: 61  ADSKIDTCEMEHSNGPYGENLAEGYDEMTAVEAVKFWATEKKFYNHHLNRCIGDECGHYT 120
           ADSKIDTCEM+HSNGPYGENLAEGYDEMTAVEAVKFWATEKKFYNHHLNRC+GDECGHYT
Sbjct: 61  ADSKIDTCEMQHSNGPYGENLAEGYDEMTAVEAVKFWATEKKFYNHHLNRCVGDECGHYT 120

Query: 121 QIVWRDTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY 161
           QIVWRDTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY
Sbjct: 121 QIVWRDTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY 160

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BLAST of Clc02G07550 vs. NCBI nr
Match: XP_008455068.1 (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo] >KAA0031390.1 basic form of pathogenesis-related protein 1-like [Cucumis melo var. makuwa] >TYK06841.1 basic form of pathogenesis-related protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 314.3 bits (804), Expect = 6.0e-82
Identity = 143/161 (88.82%), Postives = 147/161 (91.30%), Query Frame = 0


Query: 1   MASPTIFFSTICLVGFLLA-TISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQN 60
           ++S  I  STICLV FLLA TIS AQN PQDFVDTHN IRAAVGVGPVSWDDTLA YAQ+
Sbjct: 2   VSSTIIILSTICLVSFLLATTISNAQNSPQDFVDTHNDIRAAVGVGPVSWDDTLAAYAQS 61

Query: 61  YADSKIDTCEMEHSNGPYGENLAEGYDEMTAVEAVKFWATEKKFYNHHLNRCIGDECGHY 120
           YADSKIDTCEMEHSNGPYGENLAEGYDEMT VEAVKFWATEKKFYNHHLNRC+GDECGHY
Sbjct: 62  YADSKIDTCEMEHSNGPYGENLAEGYDEMTGVEAVKFWATEKKFYNHHLNRCVGDECGHY 121

Query: 121 TQIVWRDTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY 161
           TQIVWR T NIGC RVKCENNWVFVICNYNPPGNYIGQHPY
Sbjct: 122 TQIVWRHTTNIGCGRVKCENNWVFVICNYNPPGNYIGQHPY 162

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BLAST of Clc02G07550 vs. NCBI nr
Match: XP_023554743.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 312.0 bits (798), Expect = 3.0e-81
Identity = 141/160 (88.12%), Postives = 149/160 (93.12%), Query Frame = 0


Query: 1   MASPTIFFSTICLVGFLLATISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQNY 60
           MASPTI  STICLVGFLLA IS AQN P+DFVDTHN +RAAVGVGPVSWDD LA YAQNY
Sbjct: 1   MASPTI-LSTICLVGFLLAPISNAQNSPEDFVDTHNDVRAAVGVGPVSWDDNLAVYAQNY 60

Query: 61  ADSKIDTCEMEHSNGPYGENLAEGYDEMTAVEAVKFWATEKKFYNHHLNRCIGDECGHYT 120
           A SKI+TCEMEHSNGPYGENLAEGY EMTAVEAVKFWATEKKFYNHHLN+C+GDECGHYT
Sbjct: 61  AYSKIETCEMEHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYNHHLNQCVGDECGHYT 120

Query: 121 QIVWRDTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY 161
           QIVWRDTKNIGCARVKCENNWVFVIC+Y PPGNY+GQ+PY
Sbjct: 121 QIVWRDTKNIGCARVKCENNWVFVICSYYPPGNYVGQYPY 159

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BLAST of Clc02G07550 vs. NCBI nr
Match: XP_022952867.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 312.0 bits (798), Expect = 3.0e-81
Identity = 142/160 (88.75%), Postives = 149/160 (93.12%), Query Frame = 0


Query: 1   MASPTIFFSTICLVGFLLATISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQNY 60
           MASPTI  STICLVGFLLA IS AQN P+DFVDTHN IRAAVGVGPVSWDD LA YAQNY
Sbjct: 1   MASPTI-LSTICLVGFLLAPISNAQNSPEDFVDTHNDIRAAVGVGPVSWDDNLAAYAQNY 60

Query: 61  ADSKIDTCEMEHSNGPYGENLAEGYDEMTAVEAVKFWATEKKFYNHHLNRCIGDECGHYT 120
           A SKI+TCEMEHSNGPYGENLAEGY EMTAVEAVKFWATEKKFYNHHLNRC+GDECGHYT
Sbjct: 61  AYSKIETCEMEHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYNHHLNRCVGDECGHYT 120

Query: 121 QIVWRDTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY 161
           QIVWR+TKNIGCARVKCENNWVFVIC+Y PPGNY+GQ+PY
Sbjct: 121 QIVWRNTKNIGCARVKCENNWVFVICSYYPPGNYVGQYPY 159

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BLAST of Clc02G07550 vs. NCBI nr
Match: XP_004136922.1 (basic form of pathogenesis-related protein 1 [Cucumis sativus] >KGN43827.1 hypothetical protein Csa_017059 [Cucumis sativus])

HSP 1 Score: 309.7 bits (792), Expect = 1.5e-80
Identity = 142/161 (88.20%), Postives = 146/161 (90.68%), Query Frame = 0


Query: 1   MASPTIFFSTICLVGFLLA-TISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQN 60
           M S TI  STI LV FLLA TIS AQN PQDFVDTHN IRAAVGVGPVSWDDTLA YAQ+
Sbjct: 1   MVSSTIIPSTIFLVSFLLATTISNAQNSPQDFVDTHNDIRAAVGVGPVSWDDTLAAYAQS 60

Query: 61  YADSKIDTCEMEHSNGPYGENLAEGYDEMTAVEAVKFWATEKKFYNHHLNRCIGDECGHY 120
           YADSK+DTCEMEHSNGPYGENLAEGYDEMT VEAV+FWATEKKFYNHHLNRC+GDECGHY
Sbjct: 61  YADSKMDTCEMEHSNGPYGENLAEGYDEMTGVEAVRFWATEKKFYNHHLNRCVGDECGHY 120

Query: 121 TQIVWRDTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY 161
           TQIVWR T NIGC RVKCENNWVFVICNYNPPGNYIGQHPY
Sbjct: 121 TQIVWRHTTNIGCGRVKCENNWVFVICNYNPPGNYIGQHPY 161

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BLAST of Clc02G07550 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 9.7e-51
Identity = 85/157 (54.14%), Postives = 114/157 (72.61%), Query Frame = 0


Query: 7   FFSTI--CLVGF-LLATISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQNYADS 66
           F +TI  C + F +L   SKAQN PQD+++ HN  R  VGVGP++WD+ LA YAQNYA+ 
Sbjct: 3   FLTTIVACFITFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQ 62

Query: 67  KIDTCEMEHSNGPYGENLAEGYDEMTAVEAVKFWATEKKFYNHHLNRCIGDECGHYTQIV 126
           +I  C M HS+GPYGENLA  + ++ A  AVK W  EK+FY+++ N C+G  CGHYTQ+V
Sbjct: 63  RIGDCGMIHSHGPYGENLAAAFPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVV 122

Query: 127 WRDTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY 161
           WR++  +GCARV+  N W F+ CNY+PPGN+IGQ P+
Sbjct: 123 WRNSVRLGCARVRSNNGWFFITCNYDPPGNFIGQRPF 159

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BLAST of Clc02G07550 vs. ExPASy Swiss-Prot
Match: Q08697 (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 9.4e-46
Identity = 76/145 (52.41%), Postives = 104/145 (71.72%), Query Frame = 0


Query: 12  CLVGFLLATISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQNYADSKIDTCEME 71
           C + F++   S+AQ   ++F++ HN  R  VGVGP++WDD LA YAQNYA+ + D C M 
Sbjct: 9   CFITFIIFHSSQAQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDCGMI 68

Query: 72  HSNGPYGENLAEGYDEMTAVEAVKFWATEKKFYNHHLNRCI-GDECGHYTQIVWRDTKNI 131
           HS+GPYGENLA  + ++ A  AVK W  EK++Y+++ N C  G  CGHYTQ+VWR +  +
Sbjct: 69  HSDGPYGENLAAAFPQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQVVWRKSVRL 128

Query: 132 GCARVKCENNWVFVICNYNPPGNYI 156
           GCARV+C + WVF+ CNY+PPGNYI
Sbjct: 129 GCARVRCNSGWVFITCNYDPPGNYI 153

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BLAST of Clc02G07550 vs. ExPASy Swiss-Prot
Match: P07053 (Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.8e-44
Identity = 81/159 (50.94%), Postives = 106/159 (66.67%), Query Frame = 0


Query: 4   PTIFFSTICLVGFLLATISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQNYADS 63
           P+ F  +  L+  +++  S AQN  QD++D HN  RA VGV P++WD+ +A YAQNY   
Sbjct: 10  PSFFLVSTLLLFLIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQ 69

Query: 64  KIDTCEMEHSNGPYGENLAEGY-DEMTAVEAVKFWATEKKFYNHHLNRCI-GDECGHYTQ 123
               C + HS+G YGENLA+G  D MTA +AV+ W  EK++Y+H  N C  G  CGHYTQ
Sbjct: 70  LAADCNLVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQ 129

Query: 124 IVWRDTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY 161
           +VWR++  +GCARVKC N    V CNY+PPGN IGQ PY
Sbjct: 130 VVWRNSVRVGCARVKCNNGGYVVSCNYDPPGNVIGQSPY 168

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BLAST of Clc02G07550 vs. ExPASy Swiss-Prot
Match: P08299 (Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.0e-44
Identity = 80/159 (50.31%), Postives = 106/159 (66.67%), Query Frame = 0


Query: 4   PTIFFSTICLVGFLLATISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQNYADS 63
           P+    +  L+  +++   +AQN  QD++D HN  RA VGV P++WDD +A YAQNYA  
Sbjct: 10  PSFLLVSTLLLFLVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQ 69

Query: 64  KIDTCEMEHSNGPYGENLAEGY-DEMTAVEAVKFWATEKKFYNHHLNRCI-GDECGHYTQ 123
               C + HS+G YGENLAEG  D MTA +AV+ W  EK++Y+H  N C  G  CGHYTQ
Sbjct: 70  LAADCNLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQ 129

Query: 124 IVWRDTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY 161
           +VWR++  +GCARV+C N    V CNY+PPGNY G+ PY
Sbjct: 130 VVWRNSVRVGCARVQCNNGGYVVSCNYDPPGNYRGESPY 168

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BLAST of Clc02G07550 vs. ExPASy Swiss-Prot
Match: Q41359 (Pathogenesis-related protein PR-1 type OS=Sambucus nigra OX=4202 PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.0e-43
Identity = 79/153 (51.63%), Postives = 102/153 (66.67%), Query Frame = 0


Query: 11  ICLVGFLLATISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQNYADSKIDTCEM 70
           +C+V  ++   S AQN PQD+VD HN  R+AV VGPV+WD+++A +A+ YA S+   C +
Sbjct: 15  VCVVALVMVQYSVAQNSPQDYVDAHNAARSAVNVGPVTWDESVAAFARQYAQSRAGDCRL 74

Query: 71  EHSNGP-YGENLAEGYD-EMTAVEAVKFWATEKKFYNHHLNRCI-GDECGHYTQIVWRDT 130
            HS  P YGENLA G   E+T   AV  W  E+  YN + N C  G  CGHYTQ+VWR++
Sbjct: 75  VHSGDPRYGENLAFGSGFELTGRNAVDMWVAERNDYNPNTNTCAPGKVCGHYTQVVWRNS 134

Query: 131 KNIGCARVKCENNWVFVICNYNPPGNYIGQHPY 161
             IGCARV+C N   F+ CNY+PPGNY GQ PY
Sbjct: 135 VRIGCARVRCNNGAWFITCNYSPPGNYAGQRPY 167

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BLAST of Clc02G07550 vs. ExPASy TrEMBL
Match: A0A5D3C4J9 (Basic form of pathogenesis-related protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001450 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 2.9e-82
Identity = 143/161 (88.82%), Postives = 147/161 (91.30%), Query Frame = 0


Query: 1   MASPTIFFSTICLVGFLLA-TISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQN 60
           ++S  I  STICLV FLLA TIS AQN PQDFVDTHN IRAAVGVGPVSWDDTLA YAQ+
Sbjct: 2   VSSTIIILSTICLVSFLLATTISNAQNSPQDFVDTHNDIRAAVGVGPVSWDDTLAAYAQS 61

Query: 61  YADSKIDTCEMEHSNGPYGENLAEGYDEMTAVEAVKFWATEKKFYNHHLNRCIGDECGHY 120
           YADSKIDTCEMEHSNGPYGENLAEGYDEMT VEAVKFWATEKKFYNHHLNRC+GDECGHY
Sbjct: 62  YADSKIDTCEMEHSNGPYGENLAEGYDEMTGVEAVKFWATEKKFYNHHLNRCVGDECGHY 121

Query: 121 TQIVWRDTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY 161
           TQIVWR T NIGC RVKCENNWVFVICNYNPPGNYIGQHPY
Sbjct: 122 TQIVWRHTTNIGCGRVKCENNWVFVICNYNPPGNYIGQHPY 162

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BLAST of Clc02G07550 vs. ExPASy TrEMBL
Match: A0A1S3C012 (basic form of pathogenesis-related protein 1-like OS=Cucumis melo OX=3656 GN=LOC103495333 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 2.9e-82
Identity = 143/161 (88.82%), Postives = 147/161 (91.30%), Query Frame = 0


Query: 1   MASPTIFFSTICLVGFLLA-TISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQN 60
           ++S  I  STICLV FLLA TIS AQN PQDFVDTHN IRAAVGVGPVSWDDTLA YAQ+
Sbjct: 2   VSSTIIILSTICLVSFLLATTISNAQNSPQDFVDTHNDIRAAVGVGPVSWDDTLAAYAQS 61

Query: 61  YADSKIDTCEMEHSNGPYGENLAEGYDEMTAVEAVKFWATEKKFYNHHLNRCIGDECGHY 120
           YADSKIDTCEMEHSNGPYGENLAEGYDEMT VEAVKFWATEKKFYNHHLNRC+GDECGHY
Sbjct: 62  YADSKIDTCEMEHSNGPYGENLAEGYDEMTGVEAVKFWATEKKFYNHHLNRCVGDECGHY 121

Query: 121 TQIVWRDTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY 161
           TQIVWR T NIGC RVKCENNWVFVICNYNPPGNYIGQHPY
Sbjct: 122 TQIVWRHTTNIGCGRVKCENNWVFVICNYNPPGNYIGQHPY 162

[Close]

BLAST of Clc02G07550 vs. ExPASy TrEMBL
Match: A0A6J1GLK3 (basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111455430 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.4e-81
Identity = 142/160 (88.75%), Postives = 149/160 (93.12%), Query Frame = 0


Query: 1   MASPTIFFSTICLVGFLLATISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQNY 60
           MASPTI  STICLVGFLLA IS AQN P+DFVDTHN IRAAVGVGPVSWDD LA YAQNY
Sbjct: 1   MASPTI-LSTICLVGFLLAPISNAQNSPEDFVDTHNDIRAAVGVGPVSWDDNLAAYAQNY 60

Query: 61  ADSKIDTCEMEHSNGPYGENLAEGYDEMTAVEAVKFWATEKKFYNHHLNRCIGDECGHYT 120
           A SKI+TCEMEHSNGPYGENLAEGY EMTAVEAVKFWATEKKFYNHHLNRC+GDECGHYT
Sbjct: 61  AYSKIETCEMEHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYNHHLNRCVGDECGHYT 120

Query: 121 QIVWRDTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY 161
           QIVWR+TKNIGCARVKCENNWVFVIC+Y PPGNY+GQ+PY
Sbjct: 121 QIVWRNTKNIGCARVKCENNWVFVICSYYPPGNYVGQYPY 159

[Close]

BLAST of Clc02G07550 vs. ExPASy TrEMBL
Match: A0A0A0K6A0 (SCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G070235 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 7.2e-81
Identity = 142/161 (88.20%), Postives = 146/161 (90.68%), Query Frame = 0


Query: 1   MASPTIFFSTICLVGFLLA-TISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQN 60
           M S TI  STI LV FLLA TIS AQN PQDFVDTHN IRAAVGVGPVSWDDTLA YAQ+
Sbjct: 1   MVSSTIIPSTIFLVSFLLATTISNAQNSPQDFVDTHNDIRAAVGVGPVSWDDTLAAYAQS 60

Query: 61  YADSKIDTCEMEHSNGPYGENLAEGYDEMTAVEAVKFWATEKKFYNHHLNRCIGDECGHY 120
           YADSK+DTCEMEHSNGPYGENLAEGYDEMT VEAV+FWATEKKFYNHHLNRC+GDECGHY
Sbjct: 61  YADSKMDTCEMEHSNGPYGENLAEGYDEMTGVEAVRFWATEKKFYNHHLNRCVGDECGHY 120

Query: 121 TQIVWRDTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY 161
           TQIVWR T NIGC RVKCENNWVFVICNYNPPGNYIGQHPY
Sbjct: 121 TQIVWRHTTNIGCGRVKCENNWVFVICNYNPPGNYIGQHPY 161

[Close]

BLAST of Clc02G07550 vs. ExPASy TrEMBL
Match: A0A6J1I4S3 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111470990 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 4.7e-80
Identity = 140/160 (87.50%), Postives = 148/160 (92.50%), Query Frame = 0


Query: 1   MASPTIFFSTICLVGFLLATISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQNY 60
           MAS TI  STICLVGFLLA IS AQN P+DFVDTHN IRAAVGVGPVSWD+ LA YAQNY
Sbjct: 1   MASHTI-LSTICLVGFLLAPISNAQNSPEDFVDTHNDIRAAVGVGPVSWDNNLAAYAQNY 60

Query: 61  ADSKIDTCEMEHSNGPYGENLAEGYDEMTAVEAVKFWATEKKFYNHHLNRCIGDECGHYT 120
           A SKI+TC+MEHSNGPYGENLAEGY EMTAVEAVKFWATEKKFYNHHLNRC+GDECGHYT
Sbjct: 61  AYSKIETCKMEHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYNHHLNRCVGDECGHYT 120

Query: 121 QIVWRDTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY 161
           QIVWRDTKNIGCARVKCENNWVFVIC+Y PPGNY+GQ+PY
Sbjct: 121 QIVWRDTKNIGCARVKCENNWVFVICSYYPPGNYVGQYPY 159

[Close]

BLAST of Clc02G07550 vs. TAIR 10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 180.6 bits (457), Expect = 9.7e-46
Identity = 81/155 (52.26%), Postives = 106/155 (68.39%), Query Frame = 0


Query: 8   FSTICLVGFLLATISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQNYADSKIDT 67
           F  I  + FL+   + AQN PQD++++HN  RA VGV  V WD TLA YA NY++ +   
Sbjct: 8   FLVIVAISFLVVA-TNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKAD 67

Query: 68  CEMEHSNGPYGENLAEG-YDEMTAVEAVKFWATEKKFYNHHLNRCI-GDECGHYTQIVWR 127
           C + HSNGPYGENLA+G     +A+ AVK W  EK +Y++  N C  G +C HYTQ+VWR
Sbjct: 68  CNLVHSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWR 127

Query: 128 DTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY 161
           D+  IGCARV+C N W FV CNYN PGN++G++PY
Sbjct: 128 DSVKIGCARVQCTNTWWFVSCNYNSPGNWVGEYPY 161

[Close]

BLAST of Clc02G07550 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 172.2 bits (435), Expect = 3.4e-43
Identity = 71/139 (51.08%), Postives = 98/139 (70.50%), Query Frame = 0


Query: 23  KAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQNYADSKIDTCEMEHSNGPYGENLA 82
           KAQ+ PQDF+  HN  RA VGVGP+ WD+ +A YA+NYA+ +   C M+HS+G YGEN+A
Sbjct: 25  KAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSSGSYGENIA 84

Query: 83  EGYDEMTAVEAVKFWATEKKFYNHHLNRCIGD-ECGHYTQIVWRDTKNIGCARVKCENNW 142
                MT V AV  W  E+  Y++  N C  D +CGHYTQ+VWR+++ +GCA+V+C N  
Sbjct: 85  WSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERLGCAKVRCNNGQ 144

Query: 143 VFVICNYNPPGNYIGQHPY 161
            F+ CNY+PPGN++G+ PY
Sbjct: 145 TFITCNYDPPGNWVGEWPY 163

[Close]

BLAST of Clc02G07550 vs. TAIR 10
Match: AT2G19990.1 (pathogenesis-related protein-1-like )

HSP 1 Score: 171.4 bits (433), Expect = 5.9e-43
Identity = 75/135 (55.56%), Postives = 101/135 (74.81%), Query Frame = 0


Query: 28  PQDFVDTHNVIRAAVGVGPVSWDDTLATYAQNYADSKIDTCEMEHSNGPYGENLAEGYDE 87
           PQ+ +  HN  RA VGVGP+ W++TLATYAQ+YA  +   C M+HS GP+GENLA G+  
Sbjct: 42  PQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGENLAAGWGT 101

Query: 88  MTAVEAVKFWATEKKFYNHHLNRCIGD-ECGHYTQIVWRDTKNIGCARVKCENN-WVFVI 147
           M+   A ++W TEK+ Y++  N C GD  CGHYTQIVWRD+  +GCA V+C+N+ +++VI
Sbjct: 102 MSGPVATEYWMTEKENYDYDSNTCGGDGVCGHYTQIVWRDSVRLGCASVRCKNDEYIWVI 161

Query: 148 CNYNPPGNYIGQHPY 161
           C+Y+PPGNYIGQ PY
Sbjct: 162 CSYDPPGNYIGQRPY 176

[Close]

BLAST of Clc02G07550 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 170.6 bits (431), Expect = 1.0e-42
Identity = 74/148 (50.00%), Postives = 99/148 (66.89%), Query Frame = 0


Query: 13  LVGFLLATISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQNYADSKIDTCEMEH 72
           LVG L+  + KAQ+  QD+V+ HN  R+ +GVGP+ WD+ LA YA+NYA+     C + H
Sbjct: 16  LVGALVVPL-KAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVH 75

Query: 73  SNGPYGENLAEGYDEMTAVEAVKFWATEKKFYNHHLNRCIGDECGHYTQIVWRDTKNIGC 132
           S GPYGENLA+   +++ V AV  W  EK  YN+  N C G  CGHYTQ+VWR++  +GC
Sbjct: 76  SRGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTCNG-VCGHYTQVVWRNSVRLGC 135

Query: 133 ARVKCENNWVFVICNYNPPGNYIGQHPY 161
           A+V+C N    + CNY+PPGNY  Q PY
Sbjct: 136 AKVRCNNGGTIISCNYDPPGNYANQKPY 161

[Close]

BLAST of Clc02G07550 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 170.2 bits (430), Expect = 1.3e-42
Identity = 74/150 (49.33%), Postives = 100/150 (66.67%), Query Frame = 0


Query: 11  ICLVGFLLATISKAQNDPQDFVDTHNVIRAAVGVGPVSWDDTLATYAQNYADSKIDTCEM 70
           + LVG L+   SKAQ+ PQD++  HN  R AVGVGP+ WD+ +A YA++YA+     C +
Sbjct: 14  VALVGALVLP-SKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRL 73

Query: 71  EHSNGPYGENLAEGYDEMTAVEAVKFWATEKKFYNHHLNRCIGDECGHYTQIVWRDTKNI 130
            HS GPYGENLA G  +++ V AV  W +EK  YN+  N C G  CGHYTQ+VWR +  +
Sbjct: 74  IHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTCNG-VCGHYTQVVWRKSVRL 133

Query: 131 GCARVKCENNWVFVICNYNPPGNYIGQHPY 161
           GCA+V+C N    + CNY+P GNY+ + PY
Sbjct: 134 GCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

The following BLAST results are available for this feature:

BLAST of Clc02G07550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888452.1	8.7e-89	93.13	basic form of pathogenesis-related protein 1-like [Benincasa hispida]	[more]
XP_008455068.1	6.0e-82	88.82	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo] >KAA...	[more]
XP_023554743.1	3.0e-81	88.13	basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022952867.1	3.0e-81	88.75	basic form of pathogenesis-related protein 1-like [Cucurbita moschata]	[more]
XP_004136922.1	1.5e-80	88.20	basic form of pathogenesis-related protein 1 [Cucumis sativus] >KGN43827.1 hypot...	[more]

BLAST of Clc02G07550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P11670	9.7e-51	54.14	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S...	[more]
Q08697	9.4e-46	52.41	Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P07053	1.8e-44	50.94	Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
P08299	3.0e-44	50.31	Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1	[more]
Q41359	2.0e-43	51.63	Pathogenesis-related protein PR-1 type OS=Sambucus nigra OX=4202 PE=2 SV=1	[more]

BLAST of Clc02G07550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C4J9	2.9e-82	88.82	Basic form of pathogenesis-related protein 1-like OS=Cucumis melo var. makuwa OX...	[more]
A0A1S3C012	2.9e-82	88.82	basic form of pathogenesis-related protein 1-like OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1GLK3	1.4e-81	88.75	basic form of pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A0A0K6A0	7.2e-81	88.20	SCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G070235 PE=4 SV...	[more]
A0A6J1I4S3	4.7e-80	87.50	basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of Clc02G07550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50060.1	9.7e-46	52.26	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT4G33720.1	3.4e-43	51.08	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G19990.1	5.9e-43	55.56	pathogenesis-related protein-1-like	[more]
AT2G14580.1	1.0e-42	50.00	basic pathogenesis-related protein 1	[more]
AT2G14610.1	1.3e-42	49.33	pathogenesis-related gene 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein-related	PRINTS	PR00837	V5TPXLIKE	coord: 47..65 score: 40.22 coord: 143..156 score: 53.31 coord: 116..132 score: 60.62 coord: 93..106 score: 37.14
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 13..160
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 26..156 e-value: 2.0E-55 score: 200.2
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 33..148 e-value: 1.7E-24 score: 87.1
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 25..160 e-value: 1.8E-44 score: 153.4
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 26..160
None	No IPR available	PANTHER	PTHR10334:SF397	SUBFAMILY NOT NAMED	coord: 13..160
None	No IPR available	CDD	cd05381	CAP_PR-1	coord: 28..160 e-value: 4.64092E-80 score: 231.369
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 117..127
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 143..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G07550.1	Clc02G07550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005615	extracellular space
cellular_component	GO:0005576	extracellular region