Clc02G07540 (gene) Watermelon (cordophanus) v2

Overview
NameClc02G07540
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionPathogenesis related protein-1
LocationClcChr02: 7941273 .. 7941761 (-)
RNA-Seq ExpressionClc02G07540
SyntenyClc02G07540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGAAAATGGCACTCGCCAACGTTCTCTCCACCATTTGCATGTTTGCGCTAACCCTAACCCCCATCGTCATTGCTCAAAACACCCCTGACGACTTCGTCAACGAGCACAATGCAGTTCGAGCCAAGGTCGGGGCTGAACCCCTCTTTTGGGATGAAGAACTTGCAACTTACGCTAAAAATTACATCACGTCGAAGATTAAAACATGCGAGATGGTGCACTCCAATGGCCCTTACGGAGAGAACTTGGCCACAGTAAACGGCGAGTTGACCGCAGCAGCTGCTGTGAAGGCATGGGCGGATGAAAAGAAGTTTTATGACCACAATTCCAACAAATGTGTGGGGGGCGAGTGTCGACATTATACACAATTGGTGTGGAAGAAAAGTTTCTTGGTGGGTTGTGCTACTGTTAAATGCAAAAACAATTGGTCTTTACTCTCATGCAACTATAGTCCTTCTGGTAATGTTGTAGGTGAGCTACCTTATTAG

mRNA sequence

ATGTCGAAAATGGCACTCGCCAACGTTCTCTCCACCATTTGCATGTTTGCGCTAACCCTAACCCCCATCGTCATTGCTCAAAACACCCCTGACGACTTCGTCAACGAGCACAATGCAGTTCGAGCCAAGGTCGGGGCTGAACCCCTCTTTTGGGATGAAGAACTTGCAACTTACGCTAAAAATTACATCACGTCGAAGATTAAAACATGCGAGATGGTGCACTCCAATGGCCCTTACGGAGAGAACTTGGCCACAGTAAACGGCGAGTTGACCGCAGCAGCTGCTGTGAAGGCATGGGCGGATGAAAAGAAGTTTTATGACCACAATTCCAACAAATGTGTGGGGGGCGAGTGTCGACATTATACACAATTGGTGTGGAAGAAAAGTTTCTTGGTGGGTTGTGCTACTGTTAAATGCAAAAACAATTGGTCTTTACTCTCATGCAACTATAGTCCTTCTGGTAATGTTGTAGGTGAGCTACCTTATTAG

Coding sequence (CDS)

ATGTCGAAAATGGCACTCGCCAACGTTCTCTCCACCATTTGCATGTTTGCGCTAACCCTAACCCCCATCGTCATTGCTCAAAACACCCCTGACGACTTCGTCAACGAGCACAATGCAGTTCGAGCCAAGGTCGGGGCTGAACCCCTCTTTTGGGATGAAGAACTTGCAACTTACGCTAAAAATTACATCACGTCGAAGATTAAAACATGCGAGATGGTGCACTCCAATGGCCCTTACGGAGAGAACTTGGCCACAGTAAACGGCGAGTTGACCGCAGCAGCTGCTGTGAAGGCATGGGCGGATGAAAAGAAGTTTTATGACCACAATTCCAACAAATGTGTGGGGGGCGAGTGTCGACATTATACACAATTGGTGTGGAAGAAAAGTTTCTTGGTGGGTTGTGCTACTGTTAAATGCAAAAACAATTGGTCTTTACTCTCATGCAACTATAGTCCTTCTGGTAATGTTGTAGGTGAGCTACCTTATTAG

Protein sequence

MSKMALANVLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKNYITSKIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRHYTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY
Homology
BLAST of Clc02G07540 vs. NCBI nr
Match: XP_008455067.1 (PREDICTED: pathogenesis-related protein 1A-like [Cucumis melo] >KAA0031387.1 pathogenesis-related protein 1A-like [Cucumis melo var. makuwa] >TYK06839.1 pathogenesis-related protein 1A-like [Cucumis melo var. makuwa])

HSP 1 Score: 280.0 bits (715), Expect = 1.3e-71
Identity = 122/162 (75.31%), Postives = 146/162 (90.12%), Query Frame = 0

Query: 1   MSKMALANVLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAK 60
           MSKMAL+N+ S+IC+  LTL P+++A NTP ++V+ HNAVRA+VG +P+FWDEELA YA+
Sbjct: 26  MSKMALSNIPSSICLIMLTLIPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQ 85

Query: 61  NYITSKIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRH 120
           NY+ SK+ TCEMVHSNGPYGENLAT++G LTAAAAV+AWADEKK+YDHNSN CVGGECRH
Sbjct: 86  NYLESKVSTCEMVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECRH 145

Query: 121 YTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           YTQLVWK SFL+GCA +KCKNNWSL+SCNYSP+GNV GELPY
Sbjct: 146 YTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVAGELPY 187

BLAST of Clc02G07540 vs. NCBI nr
Match: XP_004137082.3 (basic form of pathogenesis-related protein 1 [Cucumis sativus])

HSP 1 Score: 278.5 bits (711), Expect = 3.7e-71
Identity = 126/163 (77.30%), Postives = 147/163 (90.18%), Query Frame = 0

Query: 1   MSKMALANVLSTICMFALTLT-PIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYA 60
           MS MAL+N  S+IC+  LTLT P+++A NTP ++V+ HNAVRA+VGA+P+FWDEELA YA
Sbjct: 25  MSNMALSNFPSSICLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYA 84

Query: 61  KNYITSKIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECR 120
           +NY+ SKI TCEMVHSNG YGENLAT++G LTAAAAVKAWADEKK+YDHNSNKCVGGECR
Sbjct: 85  QNYLDSKISTCEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECR 144

Query: 121 HYTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           HYTQLVWK SFL+GCA +KCKNNWSL+SCNYSP+GNVVGELPY
Sbjct: 145 HYTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVVGELPY 187

BLAST of Clc02G07540 vs. NCBI nr
Match: XP_004137081.1 (basic form of pathogenesis-related protein 1 [Cucumis sativus])

HSP 1 Score: 275.8 bits (704), Expect = 2.4e-70
Identity = 129/159 (81.13%), Postives = 137/159 (86.16%), Query Frame = 0

Query: 4   MALANVLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKNYI 63
           MALA  LS +C+ AL LTPIVIAQN+P DF + HNAVRAKVGAEPLFWDEEL  YAKNYI
Sbjct: 1   MALATTLSALCIVALALTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYI 60

Query: 64  TSKIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRHYTQ 123
           TSKIKTCEMVH  GPYGENLAT N  LTAAA+V  WA EKK+Y+HNSNKC GGECRHY Q
Sbjct: 61  TSKIKTCEMVHFVGPYGENLATANPVLTAAASVNTWAAEKKYYNHNSNKCEGGECRHYRQ 120

Query: 124 LVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           LVWK SFLVGCATVKCKNNWSL+SCNYSPSGNVVGE PY
Sbjct: 121 LVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY 159

BLAST of Clc02G07540 vs. NCBI nr
Match: XP_038886847.1 (pathogenesis-related protein 1A-like [Benincasa hispida])

HSP 1 Score: 273.5 bits (698), Expect = 1.2e-69
Identity = 121/162 (74.69%), Postives = 144/162 (88.89%), Query Frame = 0

Query: 1   MSKMALANVLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAK 60
           MSKM+L+N+LS+IC+  LT  P+ +A NTP  +V+ HNAVRA+VGA+P+FWDEELATYA 
Sbjct: 1   MSKMSLSNILSSICLIMLTFIPMFLAHNTPQHYVDAHNAVRAEVGADPVFWDEELATYAN 60

Query: 61  NYITSKIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRH 120
           NY+ +KI TCEMVHS GPYGENLAT++G LTAAAAV+AWADEKK+YDH SN CVGGECRH
Sbjct: 61  NYLETKIATCEMVHSKGPYGENLATLDGLLTAAAAVQAWADEKKYYDHKSNTCVGGECRH 120

Query: 121 YTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           YTQLVWKKSFL+GCA VKCKN+W+L+SCNYSP+GNV GELPY
Sbjct: 121 YTQLVWKKSFLIGCANVKCKNHWTLVSCNYSPAGNVPGELPY 162

BLAST of Clc02G07540 vs. NCBI nr
Match: KAE8645836.1 (hypothetical protein Csa_017290 [Cucumis sativus])

HSP 1 Score: 259.2 bits (661), Expect = 2.3e-65
Identity = 116/155 (74.84%), Postives = 139/155 (89.68%), Query Frame = 0

Query: 4   MALANVLSTICMFALTLT-PIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKNY 63
           MAL+N  S+IC+  LTLT P+++A NTP ++V+ HNAVRA+VGA+P+FWDEELA YA+NY
Sbjct: 1   MALSNFPSSICLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYAQNY 60

Query: 64  ITSKIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRHYT 123
           + SKI TCEMVHSNG YGENLAT++G LTAAAAVKAWADEKK+YDHNSNKCVGGECRHYT
Sbjct: 61  LDSKISTCEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECRHYT 120

Query: 124 QLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVV 158
           QLVWK SFL+GCA +KCKNNWSL+SCNYSP+G+ +
Sbjct: 121 QLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGSAL 155

BLAST of Clc02G07540 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.5e-46
Identity = 76/137 (55.47%), Postives = 97/137 (70.80%), Query Frame = 0

Query: 26  AQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKNYITSKIKTCEMVHSNGPYGENLAT 85
           AQN+P D++N HNA R +VG  P+ WD  LA YA+NY   +I  C M+HS+GPYGENLA 
Sbjct: 23  AQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGMIHSHGPYGENLAA 82

Query: 86  VNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRHYTQLVWKKSFLVGCATVKCKNNWSL 145
              +L AA AVK W DEK+FYD+NSN CVGG C HYTQ+VW+ S  +GCA V+  N W  
Sbjct: 83  AFPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVVWRNSVRLGCARVRSNNGWFF 142

Query: 146 LSCNYSPSGNVVGELPY 163
           ++CNY P GN +G+ P+
Sbjct: 143 ITCNYDPPGNFIGQRPF 159

BLAST of Clc02G07540 vs. ExPASy Swiss-Prot
Match: P07053 (Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 4.9e-42
Identity = 81/163 (49.69%), Postives = 112/163 (68.71%), Query Frame = 0

Query: 2   SKMALANVLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKN 61
           S+M    ++ST+ +F L ++    AQN+  D+++ HN  RA VG EPL WD  +A YA+N
Sbjct: 7   SQMPSFFLVSTLLLF-LIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQN 66

Query: 62  YITSKIKTCEMVHSNGPYGENLATVNGE-LTAAAAVKAWADEKKFYDHNSNKCVGGE-CR 121
           Y++     C +VHS+G YGENLA  +G+ +TAA AV+ W DEK++YDH+SN C  G+ C 
Sbjct: 67  YVSQLAADCNLVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCG 126

Query: 122 HYTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           HYTQ+VW+ S  VGCA VKC N   ++SCNY P GNV+G+ PY
Sbjct: 127 HYTQVVWRNSVRVGCARVKCNNGGYVVSCNYDPPGNVIGQSPY 168

BLAST of Clc02G07540 vs. ExPASy Swiss-Prot
Match: P08299 (Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 5.4e-41
Identity = 78/156 (50.00%), Postives = 108/156 (69.23%), Query Frame = 0

Query: 9   VLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKNYITSKIK 68
           ++ST+ +F L ++    AQN+  D+++ HN  RA VG EPL WD+++A YA+NY +    
Sbjct: 14  LVSTLLLF-LVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAA 73

Query: 69  TCEMVHSNGPYGENLATVNGE-LTAAAAVKAWADEKKFYDHNSNKCVGGE-CRHYTQLVW 128
            C +VHS+G YGENLA  +G+ +TAA AV+ W DEK++YDH+SN C  G+ C HYTQ+VW
Sbjct: 74  DCNLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVW 133

Query: 129 KKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           + S  VGCA V+C N   ++SCNY P GN  GE PY
Sbjct: 134 RNSVRVGCARVQCNNGGYVVSCNYDPPGNYRGESPY 168

BLAST of Clc02G07540 vs. ExPASy Swiss-Prot
Match: P09042 (Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3)

HSP 1 Score: 167.9 bits (424), Expect = 9.2e-41
Identity = 79/163 (48.47%), Postives = 113/163 (69.33%), Query Frame = 0

Query: 2   SKMALANVLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKN 61
           S+M+   ++ST+ +F L ++    AQN+  D+++ HN  RA VG EPL WD+++A YA+N
Sbjct: 7   SQMSSFFLVSTLLLF-LIISHSCHAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQN 66

Query: 62  YITSKIKTCEMVHSNGPYGENLATVNGE-LTAAAAVKAWADEKKFYDHNSNKCVGGE-CR 121
           Y +     C +VHS+G YGENLA  +G+ LTAA AV+ W +EK++Y H+SN C  G+ C 
Sbjct: 67  YASQLAADCNLVHSHGQYGENLAWGSGDFLTAAKAVEMWVNEKQYYAHDSNTCAQGQVCG 126

Query: 122 HYTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           HYTQ+VW+ S  VGCA V+C N   ++SCNY P GNV+G+ PY
Sbjct: 127 HYTQVVWRNSVRVGCARVQCNNGGYIVSCNYDPPGNVIGKSPY 168

BLAST of Clc02G07540 vs. ExPASy Swiss-Prot
Match: Q08697 (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.3e-39
Identity = 69/133 (51.88%), Postives = 92/133 (69.17%), Query Frame = 0

Query: 26  AQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKNYITSKIKTCEMVHSNGPYGENLAT 85
           AQ   ++F+N HNA R +VG  P+ WD+ LA YA+NY   +   C M+HS+GPYGENLA 
Sbjct: 21  AQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDCGMIHSDGPYGENLAA 80

Query: 86  VNGELTAAAAVKAWADEKKFYDHNSNKCVGGE-CRHYTQLVWKKSFLVGCATVKCKNNWS 145
              +L AA AVK W DEK++YD+NSN C  G+ C HYTQ+VW+KS  +GCA V+C + W 
Sbjct: 81  AFPQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQVVWRKSVRLGCARVRCNSGWV 140

Query: 146 LLSCNYSPSGNVV 158
            ++CNY P GN +
Sbjct: 141 FITCNYDPPGNYI 153

BLAST of Clc02G07540 vs. ExPASy TrEMBL
Match: A0A5D3C911 (Pathogenesis-related protein 1A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001430 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 6.2e-72
Identity = 122/162 (75.31%), Postives = 146/162 (90.12%), Query Frame = 0

Query: 1   MSKMALANVLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAK 60
           MSKMAL+N+ S+IC+  LTL P+++A NTP ++V+ HNAVRA+VG +P+FWDEELA YA+
Sbjct: 26  MSKMALSNIPSSICLIMLTLIPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQ 85

Query: 61  NYITSKIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRH 120
           NY+ SK+ TCEMVHSNGPYGENLAT++G LTAAAAV+AWADEKK+YDHNSN CVGGECRH
Sbjct: 86  NYLESKVSTCEMVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECRH 145

Query: 121 YTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           YTQLVWK SFL+GCA +KCKNNWSL+SCNYSP+GNV GELPY
Sbjct: 146 YTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVAGELPY 187

BLAST of Clc02G07540 vs. ExPASy TrEMBL
Match: A0A1S3C055 (pathogenesis-related protein 1A-like OS=Cucumis melo OX=3656 GN=LOC103495332 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 6.2e-72
Identity = 122/162 (75.31%), Postives = 146/162 (90.12%), Query Frame = 0

Query: 1   MSKMALANVLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAK 60
           MSKMAL+N+ S+IC+  LTL P+++A NTP ++V+ HNAVRA+VG +P+FWDEELA YA+
Sbjct: 26  MSKMALSNIPSSICLIMLTLIPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQ 85

Query: 61  NYITSKIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRH 120
           NY+ SK+ TCEMVHSNGPYGENLAT++G LTAAAAV+AWADEKK+YDHNSN CVGGECRH
Sbjct: 86  NYLESKVSTCEMVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECRH 145

Query: 121 YTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           YTQLVWK SFL+GCA +KCKNNWSL+SCNYSP+GNV GELPY
Sbjct: 146 YTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVAGELPY 187

BLAST of Clc02G07540 vs. ExPASy TrEMBL
Match: A0A0A0K4C6 (SCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G070250 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.8e-71
Identity = 126/163 (77.30%), Postives = 147/163 (90.18%), Query Frame = 0

Query: 1   MSKMALANVLSTICMFALTLT-PIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYA 60
           MS MAL+N  S+IC+  LTLT P+++A NTP ++V+ HNAVRA+VGA+P+FWDEELA YA
Sbjct: 1   MSNMALSNFPSSICLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYA 60

Query: 61  KNYITSKIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECR 120
           +NY+ SKI TCEMVHSNG YGENLAT++G LTAAAAVKAWADEKK+YDHNSNKCVGGECR
Sbjct: 61  QNYLDSKISTCEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECR 120

Query: 121 HYTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           HYTQLVWK SFL+GCA +KCKNNWSL+SCNYSP+GNVVGELPY
Sbjct: 121 HYTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVVGELPY 163

BLAST of Clc02G07540 vs. ExPASy TrEMBL
Match: A0A6J1D6J4 (basic form of pathogenesis-related protein 1-like OS=Momordica charantia OX=3673 GN=LOC111017385 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 6.4e-61
Identity = 115/162 (70.99%), Postives = 131/162 (80.86%), Query Frame = 0

Query: 1   MSKMALANVLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAK 60
           MSKMA    L TI +  LTL+ I  AQNTPDDF+  H   R +VGA  +FWD+E+A YAK
Sbjct: 1   MSKMA---SLFTIFLIGLTLSSIARAQNTPDDFLKAHKKFRDEVGASEMFWDDEVAAYAK 60

Query: 61  NYITSKIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRH 120
            Y  SKI TCEMVHS+  YGENLATVNG+LTA  AV+AWADEKK YD+N+NKCVGGECRH
Sbjct: 61  RYAESKIDTCEMVHSDTHYGENLATVNGDLTAEMAVQAWADEKKXYDYNANKCVGGECRH 120

Query: 121 YTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           YTQLVWK SFL+GCATVKCKNNW+L+SCNYSP+GNVVGE PY
Sbjct: 121 YTQLVWKDSFLLGCATVKCKNNWTLISCNYSPTGNVVGEKPY 159

BLAST of Clc02G07540 vs. ExPASy TrEMBL
Match: A0A6J1IBS1 (basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111471055 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.9e-57
Identity = 107/163 (65.64%), Postives = 129/163 (79.14%), Query Frame = 0

Query: 1   MSKMALANVLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAK 60
           MSKM LA +L   C+ AL+L+ +V+ Q   +DFV  HNAVR K G  P+FWDEEL  +AK
Sbjct: 1   MSKMTLAAML---CLVALSLSLVVVGQEPGEDFVKAHNAVREKKGERPMFWDEELEEHAK 60

Query: 61  NYITSKIKTCEMVHS-NGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECR 120
            Y+ +K++TCEMVHS + PYGENLAT NG+LTA  AV AWA E+KFYDH +NKCVGGECR
Sbjct: 61  AYLQTKVETCEMVHSTDSPYGENLATSNGDLTAEGAVAAWAAEEKFYDHKTNKCVGGECR 120

Query: 121 HYTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           HY QLVW  +FLVGCATVKC+NNW+L+ CNYSP+GNVVGE PY
Sbjct: 121 HYVQLVWNATFLVGCATVKCRNNWTLIGCNYSPAGNVVGEDPY 160

BLAST of Clc02G07540 vs. TAIR 10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 162.5 bits (410), Expect = 2.8e-40
Identity = 76/160 (47.50%), Postives = 100/160 (62.50%), Query Frame = 0

Query: 8   NVLSTICMFALTLTPIVI---AQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKNYIT 67
           N   T  +  + ++ +V+   AQNTP D++N HN  RA+VG   + WD  LA YA NY  
Sbjct: 2   NTFKTPFLVIVAISFLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSN 61

Query: 68  SKIKTCEMVHSNGPYGENLAT-VNGELTAAAAVKAWADEKKFYDHNSNKCVGG-ECRHYT 127
            +   C +VHSNGPYGENLA   +   +A +AVK W DEK +Y +  N C GG +C HYT
Sbjct: 62  FRKADCNLVHSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYT 121

Query: 128 QLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           Q+VW+ S  +GCA V+C N W  +SCNY+  GN VGE PY
Sbjct: 122 QVVWRDSVKIGCARVQCTNTWWFVSCNYNSPGNWVGEYPY 161

BLAST of Clc02G07540 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 157.9 bits (398), Expect = 6.8e-39
Identity = 72/148 (48.65%), Postives = 96/148 (64.86%), Query Frame = 0

Query: 16  FALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKNYITSKIKTCEMVHS 75
           F L L   + AQ++P DF+  HN  RA+VG  PL WDE++A YA+NY   +   C M HS
Sbjct: 16  FFLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHS 75

Query: 76  NGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCV-GGECRHYTQLVWKKSFLVGC 135
           +G YGEN+A  +G +T  AAV  W DE+  YD++SN C    +C HYTQ+VW+ S  +GC
Sbjct: 76  SGSYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERLGC 135

Query: 136 ATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           A V+C N  + ++CNY P GN VGE PY
Sbjct: 136 AKVRCNNGQTFITCNYDPPGNWVGEWPY 163

BLAST of Clc02G07540 vs. TAIR 10
Match: AT3G19690.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 156.8 bits (395), Expect = 1.5e-38
Identity = 68/160 (42.50%), Postives = 103/160 (64.38%), Query Frame = 0

Query: 8   NVLSTICMFALTLTPIV--IAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKNYITS 67
           ++L T  +F L +      +A++    F+  HN  R +VG +PL WD+E+A YA +Y   
Sbjct: 2   SLLKTNILFLLAIALFYGSLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYANQ 61

Query: 68  KIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKC---VGGECRHYT 127
           +I  C +VHSNGP+GEN+A  +GE++A  A + W +EK++YD++SN C    GG C HYT
Sbjct: 62  RINDCALVHSNGPFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYT 121

Query: 128 QLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           Q+VWK +  +GCA V C +  + ++CNY P GN +GE P+
Sbjct: 122 QVVWKNTVRLGCAKVVCNSGGTFITCNYDPPGNYIGEKPF 161

BLAST of Clc02G07540 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 154.5 bits (389), Expect = 7.5e-38
Identity = 65/137 (47.45%), Postives = 89/137 (64.96%), Query Frame = 0

Query: 26  AQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKNYITSKIKTCEMVHSNGPYGENLAT 85
           AQ++P D++  HN  R  VG  P+ WDE +A YA++Y       C ++HS GPYGENLA 
Sbjct: 26  AQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPYGENLAW 85

Query: 86  VNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRHYTQLVWKKSFLVGCATVKCKNNWSL 145
            +G+L+  +AV  W  EK  Y++ +N C  G C HYTQ+VW+KS  +GCA V+C N  ++
Sbjct: 86  GSGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWRKSVRLGCAKVRCNNGGTI 145

Query: 146 LSCNYSPSGNVVGELPY 163
           +SCNY P GN V E PY
Sbjct: 146 ISCNYDPRGNYVNEKPY 161

BLAST of Clc02G07540 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 153.7 bits (387), Expect = 1.3e-37
Identity = 69/162 (42.59%), Postives = 98/162 (60.49%), Query Frame = 0

Query: 1   MSKMALANVLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAK 60
           M   + + +L  +      L   + AQ++  D+VN HN  R+++G  P+ WDE LA YA+
Sbjct: 1   MKVTSYSRILIILAALVGALVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYAR 60

Query: 61  NYITSKIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRH 120
           NY       C +VHS GPYGENLA   G+L+  AAV  W +EK  Y++++N C  G C H
Sbjct: 61  NYANQLKGDCRLVHSRGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC-NGVCGH 120

Query: 121 YTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           YTQ+VW+ S  +GCA V+C N  +++SCNY P GN   + PY
Sbjct: 121 YTQVVWRNSVRLGCAKVRCNNGGTIISCNYDPPGNYANQKPY 161

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008455067.11.3e-7175.31PREDICTED: pathogenesis-related protein 1A-like [Cucumis melo] >KAA0031387.1 pat... [more]
XP_004137082.33.7e-7177.30basic form of pathogenesis-related protein 1 [Cucumis sativus][more]
XP_004137081.12.4e-7081.13basic form of pathogenesis-related protein 1 [Cucumis sativus][more]
XP_038886847.11.2e-6974.69pathogenesis-related protein 1A-like [Benincasa hispida][more]
KAE8645836.12.3e-6574.84hypothetical protein Csa_017290 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
P116702.5e-4655.47Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S... [more]
P070534.9e-4249.69Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1[more]
P082995.4e-4150.00Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1[more]
P090429.2e-4148.47Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3[more]
Q086971.3e-3951.88Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A5D3C9116.2e-7275.31Pathogenesis-related protein 1A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A1S3C0556.2e-7275.31pathogenesis-related protein 1A-like OS=Cucumis melo OX=3656 GN=LOC103495332 PE=... [more]
A0A0A0K4C61.8e-7177.30SCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G070250 PE=4 SV... [more]
A0A6J1D6J46.4e-6170.99basic form of pathogenesis-related protein 1-like OS=Momordica charantia OX=3673... [more]
A0A6J1IBS11.9e-5765.64basic form of pathogenesis-related protein 1-like OS=Cucurbita maxima OX=3661 GN... [more]
Match NameE-valueIdentityDescription
AT1G50060.12.8e-4047.50CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT4G33720.16.8e-3948.65CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT3G19690.11.5e-3842.50CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT2G14610.17.5e-3847.45pathogenesis-related gene 1 [more]
AT2G14580.11.3e-3742.59basic pathogenesis-related protein 1 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001283Cysteine-rich secretory protein-relatedPRINTSPR00837V5TPXLIKEcoord: 49..67
score: 31.19
coord: 145..158
score: 48.87
coord: 118..134
score: 54.06
coord: 95..108
score: 40.6
IPR001283Cysteine-rich secretory protein-relatedPANTHERPTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDcoord: 21..162
IPR014044CAP domainSMARTSM00198SCP_3coord: 28..158
e-value: 2.8E-50
score: 183.0
IPR014044CAP domainPFAMPF00188CAPcoord: 35..150
e-value: 1.5E-19
score: 71.0
IPR035940CAP superfamilyGENE3D3.40.33.10CAPcoord: 28..162
e-value: 1.3E-41
score: 144.1
IPR035940CAP superfamilySUPERFAMILY55797PR-1-likecoord: 20..162
NoneNo IPR availablePANTHERPTHR10334:SF488PATHOGENESIS-RELATED PROTEIN 1coord: 21..162
NoneNo IPR availableCDDcd05381CAP_PR-1coord: 30..162
e-value: 3.31012E-61
score: 183.604
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01010CRISP_2coord: 145..156
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01009CRISP_1coord: 119..129

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc02G07540.1Clc02G07540.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005615 extracellular space
cellular_component GO:0005576 extracellular region