Clc02G07490 (gene) Watermelon (cordophanus) v2

Overview
NameClc02G07490
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Descriptionpathogenesis-related protein 1-like
LocationClcChr02: 7861083 .. 7862032 (-)
RNA-Seq ExpressionClc02G07490
SyntenyClc02G07490
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACAAATCCAACCTTATATTTCACATAAACTTCTCCAAACTTGTACGGTTATAAATAACTACAATGGGCATCTCATTTCTCTCACCAATACTTCTCATAATTCTCTAACTCAAAAATTAGAACAAAAAAGAAAAATGGATCTCCTCAAGCTCTCCTTCATTCTATTTTGTGTCTTGATGAGTTTCACTATGCTTCCTTCCTCTCTCGCTCAAAACTCGCCTCAAGACTTCCTCAATGCCCACAACGCTGCTCGTGCCCAAGTTGGTGTCGGACCTCTCAAATGGGACGAAAAGGTGGCAAATTATTCCAAACAATATGCCAACGAACGCAAGGGCGACTGTAAGTTGATACATTCAAACGGGCCTTACGGAGAGAATCTTGCATGGGGTAGCCCTGACTTGACAGGCATCAATGCAGTCAAGCTTTGGGTGAATGAGAAGCAATACTACAAGTACGACACCAATTCATGTGTCTCTGGAAAGGTGTGCGGGCATTATACTCAAGTGGTTTGGAAGAACTCAGCTAGACTTGGATGCGCAAAAGTGAAGTGCATAAATAACGGTGGTGCGTTCATCATTTGCAACTATGATCCTAGAGGCAATATTATTGGTCAGAAGCCATATTGAAAGATGTGTGATTTCAACTATATAATAAGAGACCCTTGGCAAAATAAAAGTTATTAAGGGCTCATGATCATATAGTTTAAATACGACTTGGTACCGTTATCGATGTACTCTAATGAAAAAATAAGAAAAAATATTTTATCAAATATAATTTGAAAATTCTAGAGCAAATTAATTAGGATAAAAACAGATTTAACTTAATTTGATGGGTTATAGTTTAAAAAATGGTGGTGGCTTTGATTTTTTTCACATGAACATAAAAATGTTCAATTGAACTATCTCAATAAATATATTATTGAACACTATTAACAAATTGTAAATAGCAAA

mRNA sequence

CACAAATCCAACCTTATATTTCACATAAACTTCTCCAAACTTGTACGGTTATAAATAACTACAATGGGCATCTCATTTCTCTCACCAATACTTCTCATAATTCTCTAACTCAAAAATTAGAACAAAAAAGAAAAATGGATCTCCTCAAGCTCTCCTTCATTCTATTTTGTGTCTTGATGAGTTTCACTATGCTTCCTTCCTCTCTCGCTCAAAACTCGCCTCAAGACTTCCTCAATGCCCACAACGCTGCTCGTGCCCAAGTTGGTGTCGGACCTCTCAAATGGGACGAAAAGGTGGCAAATTATTCCAAACAATATGCCAACGAACGCAAGGGCGACTGTAAGTTGATACATTCAAACGGGCCTTACGGAGAGAATCTTGCATGGGGTAGCCCTGACTTGACAGGCATCAATGCAGTCAAGCTTTGGGTGAATGAGAAGCAATACTACAAGTACGACACCAATTCATGTGTCTCTGGAAAGGTGTGCGGGCATTATACTCAAGTGGTTTGGAAGAACTCAGCTAGACTTGGATGCGCAAAAGTGAAGTGCATAAATAACGGTGGTGCGTTCATCATTTGCAACTATGATCCTAGAGGCAATATTATTGGTCAGAAGCCATATTGAAAGATGTGTGATTTCAACTATATAATAAGAGACCCTTGGCAAAATAAAAGTTATTAAGGGCTCATGATCATATAGTTTAAATACGACTTGGTACCGTTATCGATGTACTCTAATGAAAAAATAAGAAAAAATATTTTATCAAATATAATTTGAAAATTCTAGAGCAAATTAATTAGGATAAAAACAGATTTAACTTAATTTGATGGGTTATAGTTTAAAAAATGGTGGTGGCTTTGATTTTTTTCACATGAACATAAAAATGTTCAATTGAACTATCTCAATAAATATATTATTGAACACTATTAACAAATTGTAAATAGCAAA

Coding sequence (CDS)

ATGGATCTCCTCAAGCTCTCCTTCATTCTATTTTGTGTCTTGATGAGTTTCACTATGCTTCCTTCCTCTCTCGCTCAAAACTCGCCTCAAGACTTCCTCAATGCCCACAACGCTGCTCGTGCCCAAGTTGGTGTCGGACCTCTCAAATGGGACGAAAAGGTGGCAAATTATTCCAAACAATATGCCAACGAACGCAAGGGCGACTGTAAGTTGATACATTCAAACGGGCCTTACGGAGAGAATCTTGCATGGGGTAGCCCTGACTTGACAGGCATCAATGCAGTCAAGCTTTGGGTGAATGAGAAGCAATACTACAAGTACGACACCAATTCATGTGTCTCTGGAAAGGTGTGCGGGCATTATACTCAAGTGGTTTGGAAGAACTCAGCTAGACTTGGATGCGCAAAAGTGAAGTGCATAAATAACGGTGGTGCGTTCATCATTTGCAACTATGATCCTAGAGGCAATATTATTGGTCAGAAGCCATATTGA

Protein sequence

MDLLKLSFILFCVLMSFTMLPSSLAQNSPQDFLNAHNAARAQVGVGPLKWDEKVANYSKQYANERKGDCKLIHSNGPYGENLAWGSPDLTGINAVKLWVNEKQYYKYDTNSCVSGKVCGHYTQVVWKNSARLGCAKVKCINNGGAFIICNYDPRGNIIGQKPY
Homology
[Close]
BLAST of Clc02G07490 vs. NCBI nr
Match: XP_004136929.2 (pathogenesis-related protein 1 [Cucumis sativus] >KGN43833.1 hypothetical protein Csa_017202 [Cucumis sativus])

HSP 1 Score: 297.7 bits (761), Expect = 5.9e-77
Identity = 132/163 (80.98%), Postives = 149/163 (91.41%), Query Frame = 0 

Query: 1   MDLLKLSFILFCVLMSFTMLPSSLAQNSPQDFLNAHNAARAQVGVGPLKWDEKVANYSKQ 60
           MDLL LS ILFCVL  FTMLPSSLAQ+SPQD++N+HN ARA VGVGP+KWDEKVANYS+ 
Sbjct: 1   MDLLNLSCILFCVLSCFTMLPSSLAQDSPQDYVNSHNHARAAVGVGPIKWDEKVANYSRY 60

Query: 61  YANERKGDCKLIHSNGPYGENLAWGSPDLTGINAVKLWVNEKQYYKYDTNSCVSGKVCGH 120
           YAN+R  DC+L+HSNGPYGEN+AWGSPDL+GINAVKLWV+EKQYY Y++NSC SGKVCGH
Sbjct: 61  YANKRMNDCRLVHSNGPYGENIAWGSPDLSGINAVKLWVDEKQYYNYNSNSCASGKVCGH 120

Query: 121 YTQVVWKNSARLGCAKVKCINNGGAFIICNYDPRGNIIGQKPY 164
           YTQVVWKNS RLGCAKVKC N GGAFI+CNYDPRGNI+GQ+PY
Sbjct: 121 YTQVVWKNSMRLGCAKVKCKNKGGAFIVCNYDPRGNIVGQRPY 163

[Close]
BLAST of Clc02G07490 vs. NCBI nr
Match: XP_008455062.1 (PREDICTED: pathogenesis-related protein 1-like [Cucumis melo] >KAA0031383.1 pathogenesis-related protein 1-like [Cucumis melo var. makuwa] >TYK06835.1 pathogenesis-related protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 288.9 bits (738), Expect = 2.8e-74
Identity = 130/163 (79.75%), Postives = 144/163 (88.34%), Query Frame = 0 

Query: 1   MDLLKLSFILFCVLMSFTMLPSSLAQNSPQDFLNAHNAARAQVGVGPLKWDEKVANYSKQ 60
           MDLL LSFILFCVL  FTMLPSSLAQ+SPQD+LN HN ARA V V  ++WDEKVANYS+Q
Sbjct: 1   MDLLNLSFILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQ 60

Query: 61  YANERKGDCKLIHSNGPYGENLAWGSPDLTGINAVKLWVNEKQYYKYDTNSCVSGKVCGH 120
           YAN R  DC+L+HSNGPYGEN+AWGSPDL+G +AVKLWVNEKQYY Y+TNSC SGKVCGH
Sbjct: 61  YANLRMNDCRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGH 120

Query: 121 YTQVVWKNSARLGCAKVKCINNGGAFIICNYDPRGNIIGQKPY 164
           YTQVVWKNS RLGCAKVKC N GG FI+CNYDPRGNI+GQ+PY
Sbjct: 121 YTQVVWKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 163

[Close]
BLAST of Clc02G07490 vs. NCBI nr
Match: XP_038887491.1 (pathogenesis-related protein 1-like [Benincasa hispida])

HSP 1 Score: 285.0 bits (728), Expect = 4.0e-73
Identity = 128/163 (78.53%), Postives = 147/163 (90.18%), Query Frame = 0 

Query: 1   MDLLKLSFILFCVLMSFTMLPSSLAQNSPQDFLNAHNAARAQVGVGPLKWDEKVANYSKQ 60
           MDLLKLS  LFCVL SFTMLPSSLAQ+SPQD+LNAHNAARAQVGVGP++WDE+VA++++Q
Sbjct: 1   MDLLKLSLSLFCVL-SFTMLPSSLAQDSPQDYLNAHNAARAQVGVGPVQWDERVASFARQ 60

Query: 61  YANERKGDCKLIHSNGPYGENLAWGSPDLTGINAVKLWVNEKQYYKYDTNSCVSGKVCGH 120
           YAN+R  DCKLIHS GPYGEN+AWG PDL+G  AV++WVNEKQ+Y Y TN+C +GKVCGH
Sbjct: 61  YANQRINDCKLIHSGGPYGENIAWGWPDLSGTAAVQMWVNEKQFYNYGTNTCAAGKVCGH 120

Query: 121 YTQVVWKNSARLGCAKVKCINNGGAFIICNYDPRGNIIGQKPY 164
           YTQVVW+ S R+GCAKVKC NNGG FIICNYDPRGNIIGQKPY
Sbjct: 121 YTQVVWRKSVRIGCAKVKCTNNGGTFIICNYDPRGNIIGQKPY 162

[Close]
BLAST of Clc02G07490 vs. NCBI nr
Match: XP_008455064.1 (PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo] >KAA0031384.1 pathogenesis-related protein PRB1-2-like [Cucumis melo var. makuwa] >TYK06836.1 pathogenesis-related protein PRB1-2-like [Cucumis melo var. makuwa])

HSP 1 Score: 267.3 bits (682), Expect = 8.6e-68
Identity = 119/165 (72.12%), Postives = 145/165 (87.88%), Query Frame = 0 

Query: 1   MDLLK--LSFILFCVLMSFTMLPSSLAQNSPQDFLNAHNAARAQVGVGPLKWDEKVANYS 60
           MD+LK  LS  LFCVL +F MLPSSLAQ+SP+DF+NAHNAARAQVGVGP+ WDE+VA+++
Sbjct: 1   MDVLKLSLSLSLFCVL-TFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFA 60

Query: 61  KQYANERKGDCKLIHSNGPYGENLAWGSPDLTGINAVKLWVNEKQYYKYDTNSCVSGKVC 120
           +QYAN+R  DC+L+HS GPYGEN+AWG PDL+G  AV++WVNEKQ+Y Y +N+C +GKVC
Sbjct: 61  RQYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVC 120

Query: 121 GHYTQVVWKNSARLGCAKVKCINNGGAFIICNYDPRGNIIGQKPY 164
           GHYTQVVW+NS R+GCAKV+C NN G FIICNY+PRGNIIGQKPY
Sbjct: 121 GHYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 164

[Close]
BLAST of Clc02G07490 vs. NCBI nr
Match: XP_022952868.1 (pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 266.9 bits (681), Expect = 1.1e-67
Identity = 114/163 (69.94%), Postives = 143/163 (87.73%), Query Frame = 0 

Query: 1   MDLLKLSFILFCVLMSFTMLPSSLAQNSPQDFLNAHNAARAQVGVGPLKWDEKVANYSKQ 60
           MDL KLS  +F V++SF M  SSLAQ+SPQDF+NAHNAARAQVGVGP++WDE+VA++++Q
Sbjct: 1   MDLFKLSLSIFYVVLSFAMFRSSLAQDSPQDFVNAHNAARAQVGVGPVQWDERVASFARQ 60

Query: 61  YANERKGDCKLIHSNGPYGENLAWGSPDLTGINAVKLWVNEKQYYKYDTNSCVSGKVCGH 120
           YAN+R  DC+L+HS GPYGEN+AWGSPDL+G NAV++WV+EKQ+Y    N+C +G+VCGH
Sbjct: 61  YANQRINDCRLVHSGGPYGENIAWGSPDLSGTNAVRMWVDEKQFYNPSANTCAAGRVCGH 120

Query: 121 YTQVVWKNSARLGCAKVKCINNGGAFIICNYDPRGNIIGQKPY 164
           YTQVVW+NS R+GCAKV+C NN G FIICNYDPRGNIIGQ+P+
Sbjct: 121 YTQVVWRNSVRIGCAKVRCTNNRGTFIICNYDPRGNIIGQRPF 163

[Close]
BLAST of Clc02G07490 vs. ExPASy Swiss-Prot
Match: P09042 (Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3)

HSP 1 Score: 212.2 bits (539), Expect = 4.3e-54
Identity = 96/159 (60.38%), Postives = 122/159 (76.73%), Query Frame = 0 

Query: 7   SFILFCVLMSFTMLPSSL-AQNSPQDFLNAHNAARAQVGVGPLKWDEKVANYSKQYANER 66
           SF L   L+ F ++  S  AQNS QD+L+AHN ARA VGV PL WD++VA Y++ YA++ 
Sbjct: 11  SFFLVSTLLLFLIISHSCHAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQL 70

Query: 67  KGDCKLIHSNGPYGENLAWGSPD-LTGINAVKLWVNEKQYYKYDTNSCVSGKVCGHYTQV 126
             DC L+HS+G YGENLAWGS D LT   AV++WVNEKQYY +D+N+C  G+VCGHYTQV
Sbjct: 71  AADCNLVHSHGQYGENLAWGSGDFLTAAKAVEMWVNEKQYYAHDSNTCAQGQVCGHYTQV 130

Query: 127 VWKNSARLGCAKVKCINNGGAFIICNYDPRGNIIGQKPY 164
           VW+NS R+GCA+V+C NNGG  + CNYDP GN+IG+ PY
Sbjct: 131 VWRNSVRVGCARVQC-NNGGYIVSCNYDPPGNVIGKSPY 168

[Close]
BLAST of Clc02G07490 vs. ExPASy Swiss-Prot
Match: P33154 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 4.3e-54
Identity = 95/155 (61.29%), Postives = 119/155 (76.77%), Query Frame = 0 

Query: 9   ILFCVLMSFTMLPSSLAQNSPQDFLNAHNAARAQVGVGPLKWDEKVANYSKQYANERKGD 68
           I+F  L+   +LPS  AQ+SPQD+L  HN AR  VGVGP++WDE+VA Y++ YA + +G+
Sbjct: 11  IVFVALVGALVLPSK-AQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 70

Query: 69  CKLIHSNGPYGENLAWGSPDLTGINAVKLWVNEKQYYKYDTNSCVSGKVCGHYTQVVWKN 128
           C+LIHS GPYGENLAWGS DL+G++AV +WV+EK  Y Y  N+C    VCGHYTQVVW+ 
Sbjct: 71  CRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC--NGVCGHYTQVVWRK 130

Query: 129 SARLGCAKVKCINNGGAFIICNYDPRGNIIGQKPY 164
           S RLGCAKV+C NNGG  I CNYDPRGN + +KPY
Sbjct: 131 SVRLGCAKVRC-NNGGTIISCNYDPRGNYVNEKPY 161

[Close]
BLAST of Clc02G07490 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 4.3e-54
Identity = 97/158 (61.39%), Postives = 122/158 (77.22%), Query Frame = 0 

Query: 6   LSFILFCVLMSFTMLPSSLAQNSPQDFLNAHNAARAQVGVGPLKWDEKVANYSKQYANER 65
           L+ I+ C +    ++ SS AQNSPQD+LN HNAAR QVGVGP+ WD ++A Y++ YAN+R
Sbjct: 4   LTTIVACFITFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQR 63

Query: 66  KGDCKLIHSNGPYGENLAWGSPDLTGINAVKLWVNEKQYYKYDTNSCVSGKVCGHYTQVV 125
            GDC +IHS+GPYGENLA   P L    AVK+WV+EK++Y Y++NSCV G VCGHYTQVV
Sbjct: 64  IGDCGMIHSHGPYGENLAAAFPQLNAAGAVKMWVDEKRFYDYNSNSCVGG-VCGHYTQVV 123

Query: 126 WKNSARLGCAKVKCINNGGAFIICNYDPRGNIIGQKPY 164
           W+NS RLGCA+V+  NNG  FI CNYDP GN IGQ+P+
Sbjct: 124 WRNSVRLGCARVRS-NNGWFFITCNYDPPGNFIGQRPF 159

[Close]
BLAST of Clc02G07490 vs. ExPASy Swiss-Prot
Match: Q9ZNS4 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 8.1e-53
Identity = 95/155 (61.29%), Postives = 117/155 (75.48%), Query Frame = 0 

Query: 9   ILFCVLMSFTMLPSSLAQNSPQDFLNAHNAARAQVGVGPLKWDEKVANYSKQYANERKGD 68
           I+   L+   ++P   AQ+S QD++NAHN AR+Q+GVGP++WDE +A Y++ YAN+ KGD
Sbjct: 11  IILAALVGALVVPLK-AQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGD 70

Query: 69  CKLIHSNGPYGENLAWGSPDLTGINAVKLWVNEKQYYKYDTNSCVSGKVCGHYTQVVWKN 128
           C+L+HS GPYGENLA    DL+G+ AV LWVNEK  Y YDTN+C    VCGHYTQVVW+N
Sbjct: 71  CRLVHSRGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCGHYTQVVWRN 130

Query: 129 SARLGCAKVKCINNGGAFIICNYDPRGNIIGQKPY 164
           S RLGCAKV+C NNGG  I CNYDP GN   QKPY
Sbjct: 131 SVRLGCAKVRC-NNGGTIISCNYDPPGNYANQKPY 161

[Close]
BLAST of Clc02G07490 vs. ExPASy Swiss-Prot
Match: P07053 (Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 6.9e-52
Identity = 95/159 (59.75%), Postives = 119/159 (74.84%), Query Frame = 0 

Query: 7   SFILFCVLMSFTMLP-SSLAQNSPQDFLNAHNAARAQVGVGPLKWDEKVANYSKQYANER 66
           SF L   L+ F ++  SS AQNS QD+L+AHN ARA VGV PL WD  VA Y++ Y ++ 
Sbjct: 11  SFFLVSTLLLFLIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQL 70

Query: 67  KGDCKLIHSNGPYGENLAWGSPD-LTGINAVKLWVNEKQYYKYDTNSCVSGKVCGHYTQV 126
             DC L+HS+G YGENLA GS D +T   AV++WV+EKQYY +D+N+C  G+VCGHYTQV
Sbjct: 71  AADCNLVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQV 130

Query: 127 VWKNSARLGCAKVKCINNGGAFIICNYDPRGNIIGQKPY 164
           VW+NS R+GCA+VKC NNGG  + CNYDP GN+IGQ PY
Sbjct: 131 VWRNSVRVGCARVKC-NNGGYVVSCNYDPPGNVIGQSPY 168

[Close]
BLAST of Clc02G07490 vs. ExPASy TrEMBL
Match: A0A0A0K2V9 (SCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G070255 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 2.9e-77
Identity = 132/163 (80.98%), Postives = 149/163 (91.41%), Query Frame = 0 

Query: 1   MDLLKLSFILFCVLMSFTMLPSSLAQNSPQDFLNAHNAARAQVGVGPLKWDEKVANYSKQ 60
           MDLL LS ILFCVL  FTMLPSSLAQ+SPQD++N+HN ARA VGVGP+KWDEKVANYS+ 
Sbjct: 1   MDLLNLSCILFCVLSCFTMLPSSLAQDSPQDYVNSHNHARAAVGVGPIKWDEKVANYSRY 60

Query: 61  YANERKGDCKLIHSNGPYGENLAWGSPDLTGINAVKLWVNEKQYYKYDTNSCVSGKVCGH 120
           YAN+R  DC+L+HSNGPYGEN+AWGSPDL+GINAVKLWV+EKQYY Y++NSC SGKVCGH
Sbjct: 61  YANKRMNDCRLVHSNGPYGENIAWGSPDLSGINAVKLWVDEKQYYNYNSNSCASGKVCGH 120

Query: 121 YTQVVWKNSARLGCAKVKCINNGGAFIICNYDPRGNIIGQKPY 164
           YTQVVWKNS RLGCAKVKC N GGAFI+CNYDPRGNI+GQ+PY
Sbjct: 121 YTQVVWKNSMRLGCAKVKCKNKGGAFIVCNYDPRGNIVGQRPY 163

[Close]
BLAST of Clc02G07490 vs. ExPASy TrEMBL
Match: A0A5A7SMF3 (Pathogenesis-related protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001390 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.3e-74
Identity = 130/163 (79.75%), Postives = 144/163 (88.34%), Query Frame = 0 

Query: 1   MDLLKLSFILFCVLMSFTMLPSSLAQNSPQDFLNAHNAARAQVGVGPLKWDEKVANYSKQ 60
           MDLL LSFILFCVL  FTMLPSSLAQ+SPQD+LN HN ARA V V  ++WDEKVANYS+Q
Sbjct: 1   MDLLNLSFILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQ 60

Query: 61  YANERKGDCKLIHSNGPYGENLAWGSPDLTGINAVKLWVNEKQYYKYDTNSCVSGKVCGH 120
           YAN R  DC+L+HSNGPYGEN+AWGSPDL+G +AVKLWVNEKQYY Y+TNSC SGKVCGH
Sbjct: 61  YANLRMNDCRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGH 120

Query: 121 YTQVVWKNSARLGCAKVKCINNGGAFIICNYDPRGNIIGQKPY 164
           YTQVVWKNS RLGCAKVKC N GG FI+CNYDPRGNI+GQ+PY
Sbjct: 121 YTQVVWKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 163

[Close]
BLAST of Clc02G07490 vs. ExPASy TrEMBL
Match: A0A1S3C050 (pathogenesis-related protein 1-like OS=Cucumis melo OX=3656 GN=LOC103495328 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.3e-74
Identity = 130/163 (79.75%), Postives = 144/163 (88.34%), Query Frame = 0 

Query: 1   MDLLKLSFILFCVLMSFTMLPSSLAQNSPQDFLNAHNAARAQVGVGPLKWDEKVANYSKQ 60
           MDLL LSFILFCVL  FTMLPSSLAQ+SPQD+LN HN ARA V V  ++WDEKVANYS+Q
Sbjct: 1   MDLLNLSFILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQ 60

Query: 61  YANERKGDCKLIHSNGPYGENLAWGSPDLTGINAVKLWVNEKQYYKYDTNSCVSGKVCGH 120
           YAN R  DC+L+HSNGPYGEN+AWGSPDL+G +AVKLWVNEKQYY Y+TNSC SGKVCGH
Sbjct: 61  YANLRMNDCRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGH 120

Query: 121 YTQVVWKNSARLGCAKVKCINNGGAFIICNYDPRGNIIGQKPY 164
           YTQVVWKNS RLGCAKVKC N GG FI+CNYDPRGNI+GQ+PY
Sbjct: 121 YTQVVWKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 163

[Close]
BLAST of Clc02G07490 vs. ExPASy TrEMBL
Match: A0A5A7SJR7 (Pathogenesis-related protein PRB1-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001400 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 4.2e-68
Identity = 119/165 (72.12%), Postives = 145/165 (87.88%), Query Frame = 0 

Query: 1   MDLLK--LSFILFCVLMSFTMLPSSLAQNSPQDFLNAHNAARAQVGVGPLKWDEKVANYS 60
           MD+LK  LS  LFCVL +F MLPSSLAQ+SP+DF+NAHNAARAQVGVGP+ WDE+VA+++
Sbjct: 1   MDVLKLSLSLSLFCVL-TFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFA 60

Query: 61  KQYANERKGDCKLIHSNGPYGENLAWGSPDLTGINAVKLWVNEKQYYKYDTNSCVSGKVC 120
           +QYAN+R  DC+L+HS GPYGEN+AWG PDL+G  AV++WVNEKQ+Y Y +N+C +GKVC
Sbjct: 61  RQYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVC 120

Query: 121 GHYTQVVWKNSARLGCAKVKCINNGGAFIICNYDPRGNIIGQKPY 164
           GHYTQVVW+NS R+GCAKV+C NN G FIICNY+PRGNIIGQKPY
Sbjct: 121 GHYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 164

[Close]
BLAST of Clc02G07490 vs. ExPASy TrEMBL
Match: A0A1S3C0R9 (pathogenesis-related protein PRB1-2-like OS=Cucumis melo OX=3656 GN=LOC103495329 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 4.2e-68
Identity = 119/165 (72.12%), Postives = 145/165 (87.88%), Query Frame = 0 

Query: 1   MDLLK--LSFILFCVLMSFTMLPSSLAQNSPQDFLNAHNAARAQVGVGPLKWDEKVANYS 60
           MD+LK  LS  LFCVL +F MLPSSLAQ+SP+DF+NAHNAARAQVGVGP+ WDE+VA+++
Sbjct: 1   MDVLKLSLSLSLFCVL-TFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFA 60

Query: 61  KQYANERKGDCKLIHSNGPYGENLAWGSPDLTGINAVKLWVNEKQYYKYDTNSCVSGKVC 120
           +QYAN+R  DC+L+HS GPYGEN+AWG PDL+G  AV++WVNEKQ+Y Y +N+C +GKVC
Sbjct: 61  RQYANQRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVC 120

Query: 121 GHYTQVVWKNSARLGCAKVKCINNGGAFIICNYDPRGNIIGQKPY 164
           GHYTQVVW+NS R+GCAKV+C NN G FIICNY+PRGNIIGQKPY
Sbjct: 121 GHYTQVVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 164

[Close]
BLAST of Clc02G07490 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 212.2 bits (539), Expect = 3.1e-55
Identity = 95/155 (61.29%), Postives = 119/155 (76.77%), Query Frame = 0 

Query: 9   ILFCVLMSFTMLPSSLAQNSPQDFLNAHNAARAQVGVGPLKWDEKVANYSKQYANERKGD 68
           I+F  L+   +LPS  AQ+SPQD+L  HN AR  VGVGP++WDE+VA Y++ YA + +G+
Sbjct: 11  IVFVALVGALVLPSK-AQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 70

Query: 69  CKLIHSNGPYGENLAWGSPDLTGINAVKLWVNEKQYYKYDTNSCVSGKVCGHYTQVVWKN 128
           C+LIHS GPYGENLAWGS DL+G++AV +WV+EK  Y Y  N+C    VCGHYTQVVW+ 
Sbjct: 71  CRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC--NGVCGHYTQVVWRK 130

Query: 129 SARLGCAKVKCINNGGAFIICNYDPRGNIIGQKPY 164
           S RLGCAKV+C NNGG  I CNYDPRGN + +KPY
Sbjct: 131 SVRLGCAKVRC-NNGGTIISCNYDPRGNYVNEKPY 161

[Close]
BLAST of Clc02G07490 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 208.4 bits (529), Expect = 4.4e-54
Identity = 98/164 (59.76%), Postives = 121/164 (73.78%), Query Frame = 0 

Query: 1   MDLLKLSFILFCVLMSFTMLPSSL-AQNSPQDFLNAHNAARAQVGVGPLKWDEKVANYSK 60
           M +   S  LF  +  F +L   L AQ+SPQDFL  HN ARA+VGVGPL+WDEKVA Y++
Sbjct: 1   MKIFNSSQNLFLAITFFLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYAR 60

Query: 61  QYANERKGDCKLIHSNGPYGENLAWGSPDLTGINAVKLWVNEKQYYKYDTNSCVSGKVCG 120
            YAN+RKGDC + HS+G YGEN+AW S  +TG+ AV +WV+E+  Y YD+N+C   K CG
Sbjct: 61  NYANQRKGDCAMKHSSGSYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCG 120

Query: 121 HYTQVVWKNSARLGCAKVKCINNGGAFIICNYDPRGNIIGQKPY 164
           HYTQVVW+NS RLGCAKV+C NNG  FI CNYDP GN +G+ PY
Sbjct: 121 HYTQVVWRNSERLGCAKVRC-NNGQTFITCNYDPPGNWVGEWPY 163

[Close]
BLAST of Clc02G07490 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 208.0 bits (528), Expect = 5.8e-54
Identity = 95/155 (61.29%), Postives = 117/155 (75.48%), Query Frame = 0 

Query: 9   ILFCVLMSFTMLPSSLAQNSPQDFLNAHNAARAQVGVGPLKWDEKVANYSKQYANERKGD 68
           I+   L+   ++P   AQ+S QD++NAHN AR+Q+GVGP++WDE +A Y++ YAN+ KGD
Sbjct: 11  IILAALVGALVVPLK-AQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGD 70

Query: 69  CKLIHSNGPYGENLAWGSPDLTGINAVKLWVNEKQYYKYDTNSCVSGKVCGHYTQVVWKN 128
           C+L+HS GPYGENLA    DL+G+ AV LWVNEK  Y YDTN+C    VCGHYTQVVW+N
Sbjct: 71  CRLVHSRGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCGHYTQVVWRN 130

Query: 129 SARLGCAKVKCINNGGAFIICNYDPRGNIIGQKPY 164
           S RLGCAKV+C NNGG  I CNYDP GN   QKPY
Sbjct: 131 SVRLGCAKVRC-NNGGTIISCNYDPPGNYANQKPY 161

[Close]
BLAST of Clc02G07490 vs. TAIR 10
Match: AT3G19690.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 193.4 bits (490), Expect = 1.5e-49
Identity = 92/165 (55.76%), Postives = 121/165 (73.33%), Query Frame = 0 

Query: 1   MDLLKLSFILFCVLMSFTMLPSSLAQNSPQDFLNAHNAARAQVGVGPLKWDEKVANYSKQ 60
           M LLK + ILF  L++  +   SLA++  Q FL AHN AR +VG+ PL WD++VA Y+  
Sbjct: 1   MSLLKTN-ILF--LLAIALFYGSLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAAS 60

Query: 61  YANERKGDCKLIHSNGPYGENLAWGSPDLTGINAVKLWVNEKQYYKYDTNSC--VSGKVC 120
           YAN+R  DC L+HSNGP+GEN+A  S +++  +A ++W+NEKQYY YD+N+C   +G  C
Sbjct: 61  YANQRINDCALVHSNGPFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTC 120

Query: 121 GHYTQVVWKNSARLGCAKVKCINNGGAFIICNYDPRGNIIGQKPY 164
            HYTQVVWKN+ RLGCAKV C N+GG FI CNYDP GN IG+KP+
Sbjct: 121 LHYTQVVWKNTVRLGCAKVVC-NSGGTFITCNYDPPGNYIGEKPF 161

[Close]
BLAST of Clc02G07490 vs. TAIR 10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 180.6 bits (457), Expect = 9.9e-46
Identity = 87/164 (53.05%), Postives = 117/164 (71.34%), Query Frame = 0 

Query: 1   MDLLKLSFILFCVLMSFTMLPSSLAQNSPQDFLNAHNAARAQVGVGPLKWDEKVANYSKQ 60
           M+  K  F++  V +SF ++ ++ AQN+PQD+LN+HN ARAQVGV  + WD  +A Y+  
Sbjct: 1   MNTFKTPFLVI-VAISFLVVATN-AQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALN 60

Query: 61  YANERKGDCKLIHSNGPYGENLAWG-SPDLTGINAVKLWVNEKQYYKYDTNSCVSGKVCG 120
           Y+N RK DC L+HSNGPYGENLA G S   + I+AVKLWV+EK YY Y  N+C  GK C 
Sbjct: 61  YSNFRKADCNLVHSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCL 120

Query: 121 HYTQVVWKNSARLGCAKVKCINNGGAFIICNYDPRGNIIGQKPY 164
           HYTQVVW++S ++GCA+V+C N    F+ CNY+  GN +G+ PY
Sbjct: 121 HYTQVVWRDSVKIGCARVQCTNTWW-FVSCNYNSPGNWVGEYPY 161

The following BLAST results are available for this feature:
BLAST of Clc02G07490 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004136929.25.9e-7780.98pathogenesis-related protein 1 [Cucumis sativus] >KGN43833.1 hypothetical protei... [more]
XP_008455062.12.8e-7479.75PREDICTED: pathogenesis-related protein 1-like [Cucumis melo] >KAA0031383.1 path... [more]
XP_038887491.14.0e-7378.53pathogenesis-related protein 1-like [Benincasa hispida][more]
XP_008455064.18.6e-6872.12PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo] >KAA0031384.1... [more]
XP_022952868.11.1e-6769.94pathogenesis-related protein 1-like [Cucurbita moschata][more]
BLAST of Clc02G07490 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P090424.3e-5460.38Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3[more]
P331544.3e-5461.29Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1... [more]
P116704.3e-5461.39Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S... [more]
Q9ZNS48.1e-5361.29Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1[more]
P070536.9e-5259.75Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1[more]
BLAST of Clc02G07490 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K2V92.9e-7780.98SCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G070255 PE=4 SV... [more]
A0A5A7SMF31.3e-7479.75Pathogenesis-related protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A1S3C0501.3e-7479.75pathogenesis-related protein 1-like OS=Cucumis melo OX=3656 GN=LOC103495328 PE=4... [more]
A0A5A7SJR74.2e-6872.12Pathogenesis-related protein PRB1-2-like OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A1S3C0R94.2e-6872.12pathogenesis-related protein PRB1-2-like OS=Cucumis melo OX=3656 GN=LOC103495329... [more]
BLAST of Clc02G07490 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G14610.13.1e-5561.29pathogenesis-related gene 1 [more]
AT4G33720.14.4e-5459.76CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT2G14580.15.8e-5461.29basic pathogenesis-related protein 1 [more]
AT3G19690.11.5e-4955.76CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT1G50060.19.9e-4653.05CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001283Cysteine-rich secretory protein-relatedPRINTSPR00837V5TPXLIKEcoord: 48..66
score: 30.19
coord: 118..134
score: 62.41
coord: 146..159
score: 52.03
coord: 94..107
score: 43.61
IPR001283Cysteine-rich secretory protein-relatedPANTHERPTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDcoord: 20..163
IPR014044CAP domainSMARTSM00198SCP_3coord: 27..159
e-value: 2.3E-64
score: 229.8
IPR014044CAP domainPFAMPF00188CAPcoord: 33..151
e-value: 1.8E-20
score: 74.0
IPR035940CAP superfamilyGENE3D3.40.33.10CAPcoord: 26..163
e-value: 5.8E-46
score: 158.2
IPR035940CAP superfamilySUPERFAMILY55797PR-1-likecoord: 9..163
NoneNo IPR availablePANTHERPTHR10334:SF488PATHOGENESIS-RELATED PROTEIN 1coord: 20..163
NoneNo IPR availableCDDcd05381CAP_PR-1coord: 29..163
e-value: 1.93403E-93
score: 265.266
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01010CRISP_2coord: 146..157
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01009CRISP_1coord: 119..129

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc02G07490.1Clc02G07490.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005615 extracellular space
cellular_component GO:0005576 extracellular region