Clc02G07295 (gene) Watermelon (cordophanus) v2

Overview
NameClc02G07295
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description30S ribosomal protein S2, chloroplastic
LocationClcChr02: 7473747 .. 7475657 (-)
RNA-Seq ExpressionClc02G07295
SyntenyClc02G07295
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGAAGCAAGAGTTCGTCTTGGTCATGGTACTAGAAAATGGAATCCTAGAATGACATCTTATATCTCTGCAAAACGTATATTCATATTATAAATCTTACTAGAACTGTTCGTTTTTTTTTTATCAGAAAGCTTGTGATTTACTTTTTGATGCAGCAAGTAGGGGCAAACAATTCTTAATTGTTGGTACAAAAAATAAAGTAGTGGATTCAGTAGCTCGTGCTGCAACAAGGGCTCAGTGTCATTATGTTAATAAAAAATGGCTTGGGGGATGTTAACAAATTGATCTACTATAGAAATGAGACTATTGGGATTAGTGCCTTAAATCTCGTGGGTCTCGTAGTTTGTATATTGTAAATGATAGTTTATTTATTTAATAAAATAAGAAGTATTTTATTTCACATTTATATCGCATTAACTCAATCCAATAAACCAAGATCCAAAGTTATTTAATGTAACTTGAATAGTATGTGGTTGACACACAAGTAGATTGTATTCAAGTAATAACTTAAAAGGTATGCAACATATGGATAAGGTTGGGTGTGTTATCCTAATAATATTGTGGATACAACCCACTTTGTAATTGTTACAAGAGTTACAATCGATTTGATCCAAATCCTTCATATGGAGACATGTGAGTGGGGTATCATGTACAAAGAGTTTGTATAAGATCGGACTTTATAACACCGTTAATTGAAGAGACTAACATTTCATAGGATGATCATAGATAACTCAGTCTCAATCCTGAGTGAGTATGGACTCCTATCTATGAGGACAATCCTTTGATTTGTATGAGAGTGACTCGAGTTGCCGACTTAATATGCCTACCACTTTGAGAATTTATCTGAGTAGGGAGCTGAGAACATAACTATACAAGATGGAGTTGACTCTTTTCCGCATTCAGGGAAAGTAGATAAATTGCTCCATTAAGTACTAACCCCGTGTCTTGAACATGGAGCCCTCCCTCCCATTGGCTCGAGAGGGATTTTTTTATGGTAGGACCATAAACAGTTTGTTCATTAGAAGATCAATGAGACTTAAGGAGAAATAAGTAATTACATGGGTAAAACAGTAATTTTGACCCGGCTGTAATTATGAGCAATTTGTGAAGAATCGACTTATTGATGACTGGTTATATCCATGGACACAAAAATACATCTATAGTGCAAAAAGTGCAATTGTGAGTTTTTAGTGGAGTGACCCATAGTTAATGATCTACTACAGAAACGAGACTTCATAAGTTCAAGGACTTGAGAACAGAACAAAAGACGGGCCCCAGGTAGGTGCTTTGTTTGTGAGCTGGAAATTTAAAGATTAGTGATCCCACTGTTTTTAATGTTGGAGTGCTTAAAGGCGTAGCATGTGTTGTCGGAATTTCTTTTCAAGAAAGAACTACGATACGAGTAATTCTATAAGGGGCAAGAATCATGAAATGCTCTTTTTTTTCCAGGACGGGTCCTTGTTGGCTCAGATGCACCAATAACTACTGCCTACTGGAAAAGATTACCTATTAGACGAGTAATTCTATGAGCAAGAATAATGAAATGCTCTTTTTTTCGAGTGTGAGTCCTTATTGGCTCAGTTGCACAAATAACTGGTGTTTGGAAAAGATTACCTATTAGATTAGTGGATTCGATGTAACTCATGACCTCAGACTATCCTAAGGAGTCGGGTCTCCCAATCCAATAAAAGAAATATGGGCAAGACAAAAGAGAAGTATTAGCCCTTCTGGAAAGAGATTCAATAACACTGATCAAAGAGCTAGCAATGACTTTCTTCCCACCTGGAGTGATGGTTAAGCCACGGCCAAGAGAACCCTTCAGATACCGTAAGATGGGTTTTACAGCTGTCGGTACCACTTACCTTAACCATTCAGTCATGGATGCTTAGCGAGGATCTTCGTACTTGA

mRNA sequence

ATGATGGAAGCAAGAGTTCGTCTTGGTCATGGTACTAGAAAATGGAATCCTAGAATGACATCTTATATCTCTGCAAAACCTTGTGATTTACTTTTTGATGCAGCAAGTAGGGGCAAACAATTCTTAATTGTTGGTACAAAAAATAAAGTAGTGGATTCAGTAGCTCGTGCTGCAACAAGGGCTCAGTGTCATTATAACTACGATACGAGACGGGTCCTTGTTGGCTCAGATGCACCAATAACTACTGCCTACTGGAAAAGATTACCTATTAGACGACTGTCGGTACCACTTACCTTAACCATTCAGTCATGGATGCTTAGCGAGGATCTTCGTACTTGA

Coding sequence (CDS)

ATGATGGAAGCAAGAGTTCGTCTTGGTCATGGTACTAGAAAATGGAATCCTAGAATGACATCTTATATCTCTGCAAAACCTTGTGATTTACTTTTTGATGCAGCAAGTAGGGGCAAACAATTCTTAATTGTTGGTACAAAAAATAAAGTAGTGGATTCAGTAGCTCGTGCTGCAACAAGGGCTCAGTGTCATTATAACTACGATACGAGACGGGTCCTTGTTGGCTCAGATGCACCAATAACTACTGCCTACTGGAAAAGATTACCTATTAGACGACTGTCGGTACCACTTACCTTAACCATTCAGTCATGGATGCTTAGCGAGGATCTTCGTACTTGA

Protein sequence

MMEARVRLGHGTRKWNPRMTSYISAKPCDLLFDAASRGKQFLIVGTKNKVVDSVARAATRAQCHYNYDTRRVLVGSDAPITTAYWKRLPIRRLSVPLTLTIQSWMLSEDLRT
Homology
[Close]
BLAST of Clc02G07295 vs. NCBI nr
Match: BBN69347.1 (hypothetical protein Prudu_897S000100 [Prunus dulcis])

HSP 1 Score: 111.3 bits (277), Expect = 5.4e-21
Identity = 53/66 (80.30%), Postives = 56/66 (84.85%), Query Frame = 0 

Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK-PCDLLFDAASRGKQFLIVGTKNKVVDSVARAAT 60
          MMEA V  GHGTRKWNPRM  YISAK  CDL+FDAASRGKQFLIVGTKNK  DSVARAA 
Sbjct: 22 MMEAGVHFGHGTRKWNPRMAPYISAKQACDLVFDAASRGKQFLIVGTKNKAADSVARAAI 81

Query: 61 RAQCHY 66
          +A+CHY
Sbjct: 82 KARCHY 87

[Close]
BLAST of Clc02G07295 vs. NCBI nr
Match: YP_009752739.1 (ribosomal protein S2 [Cyclantheropsis parviflora] >QIT05389.1 ribosomal protein S2 [Cyclantheropsis parviflora])

HSP 1 Score: 108.6 bits (270), Expect = 3.5e-20
Identity = 55/83 (66.27%), Postives = 58/83 (69.88%), Query Frame = 0 

Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK------------------PCDLLFDAASRGKQFL 60
          MMEA V  GHGTRKWNPRM+ YISAK                   CDL+FDAASRGKQFL
Sbjct: 13 MMEAGVHFGHGTRKWNPRMSPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFL 72

Query: 61 IVGTKNKVVDSVARAATRAQCHY 66
          IVGTKNK  DSVARAATRA+CHY
Sbjct: 73 IVGTKNKAADSVARAATRARCHY 95

[Close]
BLAST of Clc02G07295 vs. NCBI nr
Match: YP_009562976.1 (30S ribosomal protein S2 [Huodendron biaristatum] >YP_010033987.1 ribosomal protein S2 [Huodendron tibeticum] >QAV58501.1 30S ribosomal protein S2 [Huodendron biaristatum] >QOW83361.1 ribosomal protein S2 [Huodendron tibeticum])

HSP 1 Score: 108.6 bits (270), Expect = 3.5e-20
Identity = 55/83 (66.27%), Postives = 57/83 (68.67%), Query Frame = 0 

Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK------------------PCDLLFDAASRGKQFL 60
          MMEARV  GHGTRKWNPRM  YISAK                   CDLLFDAAS+GKQFL
Sbjct: 13 MMEARVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLLFDAASKGKQFL 72

Query: 61 IVGTKNKVVDSVARAATRAQCHY 66
          IVGTKNK  DSVARAA RA+CHY
Sbjct: 73 IVGTKNKAADSVARAAIRARCHY 95

[Close]
BLAST of Clc02G07295 vs. NCBI nr
Match: YP_009236269.1 (ribosomal protein S2 [Gynostemma pentaphyllum] >YP_009440146.1 ribosomal protein S2 [Gynostemma longipes] >YP_009440233.1 ribosomal protein S2 [Gynostemma burmanicum (nom. inval.)] >YP_009440320.1 ribosomal protein S2 [Gynostemma pubescens] >AMF84014.1 ribosomal protein S2 [Gynostemma pentaphyllum] >ANI25174.1 ribosomal protein S2 [Gynostemma pentaphyllum] >ART64997.1 ribosomal protein S2 [Gynostemma pentaphyllum] >ATG86925.1 ribosomal protein S2 [Gynostemma longipes] >ATG87012.1 ribosomal protein S2 [Gynostemma burmanicum (nom. inval.)])

HSP 1 Score: 108.2 bits (269), Expect = 4.6e-20
Identity = 55/83 (66.27%), Postives = 57/83 (68.67%), Query Frame = 0 

Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK------------------PCDLLFDAASRGKQFL 60
          MMEA V  GHGTRKWNPRM  YISAK                   CDL+FDAASRGKQFL
Sbjct: 13 MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFL 72

Query: 61 IVGTKNKVVDSVARAATRAQCHY 66
          IVGTKNK  DSVARAATRA+CHY
Sbjct: 73 IVGTKNKAADSVARAATRARCHY 95

[Close]
BLAST of Clc02G07295 vs. NCBI nr
Match: YP_010119723.1 (ribosomal protein S2 [Hemsleya zhejiangensis] >QRC26965.1 ribosomal protein S2 [Hemsleya zhejiangensis])

HSP 1 Score: 108.2 bits (269), Expect = 4.6e-20
Identity = 55/83 (66.27%), Postives = 57/83 (68.67%), Query Frame = 0 

Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK------------------PCDLLFDAASRGKQFL 60
          MMEA V  GHGTRKWNPRM  YISAK                   CDL+FDAASRGKQFL
Sbjct: 13 MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFL 72

Query: 61 IVGTKNKVVDSVARAATRAQCHY 66
          IVGTKNK  DSVARAATRA+CHY
Sbjct: 73 IVGTKNKAADSVARAATRARCHY 95

[Close]
BLAST of Clc02G07295 vs. ExPASy Swiss-Prot
Match: B1A924 (30S ribosomal protein S2, chloroplastic OS=Carica papaya OX=3649 GN=rps2 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.0e-22
Identity = 54/83 (65.06%), Postives = 56/83 (67.47%), Query Frame = 0 

Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK------------------PCDLLFDAASRGKQFL 60
          MMEA V  GHGTRKWNPRM  YISAK                   CDL+FDAASRGKQFL
Sbjct: 13 MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFL 72

Query: 61 IVGTKNKVVDSVARAATRAQCHY 66
          IVGTKNK  DSVARAA RA+CHY
Sbjct: 73 IVGTKNKAADSVARAAIRARCHY 95

[Close]
BLAST of Clc02G07295 vs. ExPASy Swiss-Prot
Match: Q49L09 (30S ribosomal protein S2, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=rps2 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.0e-22
Identity = 54/83 (65.06%), Postives = 56/83 (67.47%), Query Frame = 0 

Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK------------------PCDLLFDAASRGKQFL 60
          MMEA V  GHGTRKWNPRM  YISAK                   CDL+FDAASRGKQFL
Sbjct: 13 MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTKTARFLSEACDLVFDAASRGKQFL 72

Query: 61 IVGTKNKVVDSVARAATRAQCHY 66
          IVGTKNK  DSVARAA RA+CHY
Sbjct: 73 IVGTKNKAADSVARAAIRARCHY 95

[Close]
BLAST of Clc02G07295 vs. ExPASy Swiss-Prot
Match: Q4VZP4 (30S ribosomal protein S2, chloroplastic OS=Cucumis sativus OX=3659 GN=rps2 PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 3.9e-22
Identity = 53/83 (63.86%), Postives = 56/83 (67.47%), Query Frame = 0 

Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK------------------PCDLLFDAASRGKQFL 60
          MMEA V  GHGTRKWNPRM  YISAK                   CDL+FDAA+RGKQFL
Sbjct: 13 MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAATRGKQFL 72

Query: 61 IVGTKNKVVDSVARAATRAQCHY 66
          IVGTKNK  DSVARAATR +CHY
Sbjct: 73 IVGTKNKAADSVARAATRTRCHY 95

[Close]
BLAST of Clc02G07295 vs. ExPASy Swiss-Prot
Match: P08242 (30S ribosomal protein S2, chloroplastic OS=Spinacia oleracea OX=3562 GN=rps2 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 5.1e-22
Identity = 53/83 (63.86%), Postives = 57/83 (68.67%), Query Frame = 0 

Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK------------------PCDLLFDAASRGKQFL 60
          MMEA V  GHGTRKWNPRM+ YISAK                   CDL+FDA+SRGKQFL
Sbjct: 13 MMEAGVHFGHGTRKWNPRMSPYISAKCKGIHIINLTRTARFLSEACDLVFDASSRGKQFL 72

Query: 61 IVGTKNKVVDSVARAATRAQCHY 66
          IVGTKNK  DSVARAA RA+CHY
Sbjct: 73 IVGTKNKAADSVARAAIRARCHY 95

[Close]
BLAST of Clc02G07295 vs. ExPASy Swiss-Prot
Match: Q0ZJ31 (30S ribosomal protein S2, chloroplastic OS=Vitis vinifera OX=29760 GN=rps2 PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 6.6e-22
Identity = 53/83 (63.86%), Postives = 56/83 (67.47%), Query Frame = 0 

Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK------------------PCDLLFDAASRGKQFL 60
          MMEA V  GHGTRKWNPRM  YISAK                   CDL+FDAASRGKQFL
Sbjct: 13 MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRGKQFL 72

Query: 61 IVGTKNKVVDSVARAATRAQCHY 66
          IVGTKNK  DSVARAA +A+CHY
Sbjct: 73 IVGTKNKAADSVARAAIKARCHY 95

[Close]
BLAST of Clc02G07295 vs. ExPASy TrEMBL
Match: A0A5H2XMN2 (Uncharacterized protein OS=Prunus dulcis OX=3755 GN=Prudu_897S000100 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.6e-21
Identity = 53/66 (80.30%), Postives = 56/66 (84.85%), Query Frame = 0 

Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK-PCDLLFDAASRGKQFLIVGTKNKVVDSVARAAT 60
          MMEA V  GHGTRKWNPRM  YISAK  CDL+FDAASRGKQFLIVGTKNK  DSVARAA 
Sbjct: 22 MMEAGVHFGHGTRKWNPRMAPYISAKQACDLVFDAASRGKQFLIVGTKNKAADSVARAAI 81

Query: 61 RAQCHY 66
          +A+CHY
Sbjct: 82 KARCHY 87

[Close]
BLAST of Clc02G07295 vs. ExPASy TrEMBL
Match: A0A7S6XW76 (Ribosomal protein S2 OS=Huodendron tibeticum OX=168121 GN=rps2 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.7e-20
Identity = 55/83 (66.27%), Postives = 57/83 (68.67%), Query Frame = 0 

Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK------------------PCDLLFDAASRGKQFL 60
          MMEARV  GHGTRKWNPRM  YISAK                   CDLLFDAAS+GKQFL
Sbjct: 13 MMEARVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLLFDAASKGKQFL 72

Query: 61 IVGTKNKVVDSVARAATRAQCHY 66
          IVGTKNK  DSVARAA RA+CHY
Sbjct: 73 IVGTKNKAADSVARAAIRARCHY 95

[Close]
BLAST of Clc02G07295 vs. ExPASy TrEMBL
Match: A0A6H0EV20 (30S ribosomal protein S2, chloroplastic OS=Cyclantheropsis parviflora OX=387129 GN=rps2 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.7e-20
Identity = 55/83 (66.27%), Postives = 58/83 (69.88%), Query Frame = 0 

Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK------------------PCDLLFDAASRGKQFL 60
          MMEA V  GHGTRKWNPRM+ YISAK                   CDL+FDAASRGKQFL
Sbjct: 13 MMEAGVHFGHGTRKWNPRMSPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFL 72

Query: 61 IVGTKNKVVDSVARAATRAQCHY 66
          IVGTKNK  DSVARAATRA+CHY
Sbjct: 73 IVGTKNKAADSVARAATRARCHY 95

[Close]
BLAST of Clc02G07295 vs. ExPASy TrEMBL
Match: A0A481P613 (30S ribosomal protein S2, chloroplastic OS=Huodendron biaristatum OX=153521 GN=rps2 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.7e-20
Identity = 55/83 (66.27%), Postives = 57/83 (68.67%), Query Frame = 0 

Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK------------------PCDLLFDAASRGKQFL 60
          MMEARV  GHGTRKWNPRM  YISAK                   CDLLFDAAS+GKQFL
Sbjct: 13 MMEARVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLLFDAASKGKQFL 72

Query: 61 IVGTKNKVVDSVARAATRAQCHY 66
          IVGTKNK  DSVARAA RA+CHY
Sbjct: 73 IVGTKNKAADSVARAAIRARCHY 95

[Close]
BLAST of Clc02G07295 vs. ExPASy TrEMBL
Match: A0A6H0ERY3 (30S ribosomal protein S2, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=rps2 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 2.2e-20
Identity = 55/83 (66.27%), Postives = 57/83 (68.67%), Query Frame = 0 

Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK------------------PCDLLFDAASRGKQFL 60
          MMEA V  GHGTRKWNPRM  YISAK                   CDL+FDAASRGKQFL
Sbjct: 13 MMEAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFL 72

Query: 61 IVGTKNKVVDSVARAATRAQCHY 66
          IVGTKNK  DSVARAATRA+CHY
Sbjct: 73 IVGTKNKAADSVARAATRARCHY 95

[Close]
BLAST of Clc02G07295 vs. TAIR 10
Match: ATCG00160.1 (ribosomal protein S2 )

HSP 1 Score: 100.5 bits (249), Expect = 8.9e-22
Identity = 51/83 (61.45%), Postives = 54/83 (65.06%), Query Frame = 0 

Query: 1  MMEARVRLGHGTRKWNPRMTSYISAK------------------PCDLLFDAASRGKQFL 60
          MM A V  GHGTRKWNPRM  YISAK                   CDL+FDAASRGKQFL
Sbjct: 13 MMRAGVHFGHGTRKWNPRMAPYISAKRKGIHIINLTRTARFLSEACDLVFDAASRGKQFL 72

Query: 61 IVGTKNKVVDSVARAATRAQCHY 66
          IVGTKNK  D V+RAA RA+CHY
Sbjct: 73 IVGTKNKAADLVSRAAIRARCHY 95

The following BLAST results are available for this feature:
BLAST of Clc02G07295 vs. NCBI nr
Match NameE-valueIdentityDescription
BBN69347.15.4e-2180.30hypothetical protein Prudu_897S000100 [Prunus dulcis][more]
YP_009752739.13.5e-2066.27ribosomal protein S2 [Cyclantheropsis parviflora] >QIT05389.1 ribosomal protein ... [more]
YP_009562976.13.5e-2066.2730S ribosomal protein S2 [Huodendron biaristatum] >YP_010033987.1 ribosomal prot... [more]
YP_009236269.14.6e-2066.27ribosomal protein S2 [Gynostemma pentaphyllum] >YP_009440146.1 ribosomal protein... [more]
YP_010119723.14.6e-2066.27ribosomal protein S2 [Hemsleya zhejiangensis] >QRC26965.1 ribosomal protein S2 [... [more]
BLAST of Clc02G07295 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
B1A9243.0e-2265.0630S ribosomal protein S2, chloroplastic OS=Carica papaya OX=3649 GN=rps2 PE=3 SV... [more]
Q49L093.0e-2265.0630S ribosomal protein S2, chloroplastic OS=Eucalyptus globulus subsp. globulus O... [more]
Q4VZP43.9e-2263.8630S ribosomal protein S2, chloroplastic OS=Cucumis sativus OX=3659 GN=rps2 PE=3 ... [more]
P082425.1e-2263.8630S ribosomal protein S2, chloroplastic OS=Spinacia oleracea OX=3562 GN=rps2 PE=... [more]
Q0ZJ316.6e-2263.8630S ribosomal protein S2, chloroplastic OS=Vitis vinifera OX=29760 GN=rps2 PE=3 ... [more]
BLAST of Clc02G07295 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5H2XMN22.6e-2180.30Uncharacterized protein OS=Prunus dulcis OX=3755 GN=Prudu_897S000100 PE=3 SV=1[more]
A0A7S6XW761.7e-2066.27Ribosomal protein S2 OS=Huodendron tibeticum OX=168121 GN=rps2 PE=4 SV=1[more]
A0A6H0EV201.7e-2066.2730S ribosomal protein S2, chloroplastic OS=Cyclantheropsis parviflora OX=387129 ... [more]
A0A481P6131.7e-2066.2730S ribosomal protein S2, chloroplastic OS=Huodendron biaristatum OX=153521 GN=r... [more]
A0A6H0ERY32.2e-2066.2730S ribosomal protein S2, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=rp... [more]
BLAST of Clc02G07295 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG00160.18.9e-2261.45ribosomal protein S2 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.10490coord: 1..90
e-value: 2.4E-15
score: 58.2
IPR023591Ribosomal protein S2, flavodoxin-like domain superfamilySUPERFAMILY52313Ribosomal protein S2coord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc02G07295.1Clc02G07295.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome