Clc02G07207 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G07207
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	ATP synthase subunit beta, chloroplastic
Location	ClcChr02: 7308040 .. 7308453 (+)
RNA-Seq Expression	Clc02G07207
Synteny	Clc02G07207

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTAATATTTACAATGCTTTGGTAGTTAAAGATCAAGATCCTGCTAGTCCAAAAATTAATGTGACCTGTGAAGTACAACAATTATTCGGAAAAAATCAAGTTAGACTTGTAGCTATGAGTGCTATAGATCATGGTCTAATGAGAAGAATGAACGTGGTTGACATGAAAACTTTTTTAAGTGTTCTTGTCAGCAGAGCGATTCTCGGCCGAATTCCTAACGTACTTGAAGAGCCTATTGATAATTTGAGTCCTGTAGATACTTGCAGTACAACATCTCCTATTCATGAATTTACCTCTGCTTTTATACAATTAAATATAAAATTATCTATTTTTTAAACAGGAATTGAAGCAGGAGATGTTAAAGTAAAAATTCAAAGTAAGTTTAGAGCTATATATATATTTTTTAATTAA

mRNA sequence

ATGCCTAATATTTACAATGCTTTGGTAGTTAAAGATCAAGATCCTGCTAGTCCAAAAATTAATGTGACCTGTGAAGTACAACAATTATTCGGAAAAAATCAAGTTAGACTTGTAGCTATGAGTGCTATAGATCATGGTCTAATGAGAAGAATGAACGTGGTTGACATGAAAACTTTTTTAAGTGTTCTTGTCAGCAGAGCGATTCTCGGCCGAATTCCTAACGTACTTGAAGAGCCTATTGATAATTTGAGTCCTGTAGATACTTGCAGAATTGAAGCAGGAGATGTTAAAGTAAAAATTCAAAGTAAGTTTAGAGCTATATATATATTTTTTAATTAA

Coding sequence (CDS)

ATGCCTAATATTTACAATGCTTTGGTAGTTAAAGATCAAGATCCTGCTAGTCCAAAAATTAATGTGACCTGTGAAGTACAACAATTATTCGGAAAAAATCAAGTTAGACTTGTAGCTATGAGTGCTATAGATCATGGTCTAATGAGAAGAATGAACGTGGTTGACATGAAAACTTTTTTAAGTGTTCTTGTCAGCAGAGCGATTCTCGGCCGAATTCCTAACGTACTTGAAGAGCCTATTGATAATTTGAGTCCTGTAGATACTTGCAGAATTGAAGCAGGAGATGTTAAAGTAAAAATTCAAAGTAAGTTTAGAGCTATATATATATTTTTTAATTAA

Protein sequence

MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFLSVLVSRAILGRIPNVLEEPIDNLSPVDTCRIEAGDVKVKIQSKFRAIYIFFN

Homology

[Close]

BLAST of Clc02G07207 vs. NCBI nr
Match: AAX63018.1 (ATP synthase beta subunit, partial [Ruptiliocarpon caracolito])

HSP 1 Score: 115.5 bits (288), Expect = 2.9e-22
Identity = 64/88 (72.73%), Postives = 68/88 (77.27%), Query Frame = 0


Query: 1   MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFL 60
           MPNIYNALVVK +D A  +INVTCEVQQL G NQVR VAMSA D GLMR M V+DM T L
Sbjct: 32  MPNIYNALVVKGRDTAGHQINVTCEVQQLLGNNQVRAVAMSATD-GLMRGMEVIDMGTPL 91

Query: 61  SVLVSRAILGRIPNVLEEPIDNLSPVDT 89
           SV V  A LGRI NVL EP+DNL PVDT
Sbjct: 92  SVPVGGATLGRIFNVLGEPVDNLGPVDT 118

[Close]

BLAST of Clc02G07207 vs. NCBI nr
Match: AAY19335.1 (ATP synthase beta subunit, partial [Ruptiliocarpon caracolito])

HSP 1 Score: 115.5 bits (288), Expect = 2.9e-22
Identity = 64/88 (72.73%), Postives = 68/88 (77.27%), Query Frame = 0


Query: 1   MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFL 60
           MPNIYNALVVK +D A  +INVTCEVQQL G NQVR VAMSA D GLMR M V+DM T L
Sbjct: 29  MPNIYNALVVKGRDTAGHQINVTCEVQQLLGNNQVRAVAMSATD-GLMRGMEVIDMGTPL 88

Query: 61  SVLVSRAILGRIPNVLEEPIDNLSPVDT 89
           SV V  A LGRI NVL EP+DNL PVDT
Sbjct: 89  SVPVGGATLGRIFNVLGEPVDNLGPVDT 115

[Close]

BLAST of Clc02G07207 vs. NCBI nr
Match: AAY19321.1 (ATP synthase beta subunit, partial [Lepidobotrys staudtii])

HSP 1 Score: 115.5 bits (288), Expect = 2.9e-22
Identity = 64/88 (72.73%), Postives = 68/88 (77.27%), Query Frame = 0


Query: 1   MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFL 60
           MPNIYNALVVK +D A  +INVTCEVQQL G NQVR VAMSA D GLMR M V+DM T L
Sbjct: 23  MPNIYNALVVKGRDTAGHQINVTCEVQQLLGNNQVRAVAMSATD-GLMRGMEVIDMGTPL 82

Query: 61  SVLVSRAILGRIPNVLEEPIDNLSPVDT 89
           SV V  A LGRI NVL EP+DNL PVDT
Sbjct: 83  SVPVGGATLGRIFNVLGEPVDNLGPVDT 109

[Close]

BLAST of Clc02G07207 vs. NCBI nr
Match: YP_010121652.1 (ATP synthase CF1 beta subunit [Micranthes melanocentra] >QRE78683.1 ATP synthase CF1 beta subunit [Micranthes melanocentra])

HSP 1 Score: 114.4 bits (285), Expect = 6.4e-22
Identity = 62/88 (70.45%), Postives = 68/88 (77.27%), Query Frame = 0


Query: 1   MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFL 60
           MPNIYNALVVK +D  SP+INVTCEVQQL G N+VR VAMSA D GLMR M+V+D    L
Sbjct: 40  MPNIYNALVVKGRDTVSPQINVTCEVQQLLGNNRVRAVAMSATD-GLMRGMDVIDTGAAL 99

Query: 61  SVLVSRAILGRIPNVLEEPIDNLSPVDT 89
           SV V  A LGRI NVL EP+DNL PVDT
Sbjct: 100 SVPVGGATLGRIFNVLGEPVDNLGPVDT 126

[Close]

BLAST of Clc02G07207 vs. NCBI nr
Match: YP_009002262.1 (ATP synthase CF1 beta subunit [Pinguicula ehlersiae] >CDL78818.1 ATP synthase CF1 beta subunit [Pinguicula ehlersiae])

HSP 1 Score: 114.4 bits (285), Expect = 6.4e-22
Identity = 63/88 (71.59%), Postives = 67/88 (76.14%), Query Frame = 0


Query: 1   MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFL 60
           MPNIYNAL+VK +D A   INVTCEVQQL G N+VR VAMSA D GLMRRM V+DM   L
Sbjct: 40  MPNIYNALIVKGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATD-GLMRRMEVIDMGAPL 99

Query: 61  SVLVSRAILGRIPNVLEEPIDNLSPVDT 89
           SV V  A LGRI NVL EPIDNL PVDT
Sbjct: 100 SVPVGGATLGRIFNVLGEPIDNLGPVDT 126

[Close]

BLAST of Clc02G07207 vs. ExPASy Swiss-Prot
Match: A0ZZ42 (ATP synthase subunit beta, chloroplastic OS=Gossypium barbadense OX=3634 GN=atpB PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 4.2e-24
Identity = 62/88 (70.45%), Postives = 66/88 (75.00%), Query Frame = 0


Query: 1   MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFL 60
           MPNIYNALVVK QD A  +INVTCEVQQL G N+VR VAMSA D GL R M V+D  T L
Sbjct: 40  MPNIYNALVVKGQDTAGQQINVTCEVQQLLGNNRVRAVAMSATD-GLTRGMEVIDTGTAL 99

Query: 61  SVLVSRAILGRIPNVLEEPIDNLSPVDT 89
           SV V  A LGRI NVL EP+DNL PVDT
Sbjct: 100 SVPVGGATLGRIFNVLGEPVDNLGPVDT 126

[Close]

BLAST of Clc02G07207 vs. ExPASy Swiss-Prot
Match: Q6L392 (ATP synthase subunit beta, chloroplastic OS=Saccharum hybrid OX=15819 GN=atpB PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 7.1e-24
Identity = 61/88 (69.32%), Postives = 67/88 (76.14%), Query Frame = 0


Query: 1   MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFL 60
           +PNIYNAL+VK +D A  +INVTCEVQQL G N+VR VAMSA D GLMR M V+D  T L
Sbjct: 40  LPNIYNALIVKSRDTADKQINVTCEVQQLLGNNRVRAVAMSATD-GLMRGMEVIDTGTPL 99

Query: 61  SVLVSRAILGRIPNVLEEPIDNLSPVDT 89
           SV V  A LGRI NVL EPIDNL PVDT
Sbjct: 100 SVPVGGATLGRIFNVLGEPIDNLGPVDT 126

[Close]

BLAST of Clc02G07207 vs. ExPASy Swiss-Prot
Match: Q6ENV6 (ATP synthase subunit beta, chloroplastic OS=Saccharum officinarum OX=4547 GN=atpB PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 7.1e-24
Identity = 61/88 (69.32%), Postives = 67/88 (76.14%), Query Frame = 0


Query: 1   MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFL 60
           +PNIYNAL+VK +D A  +INVTCEVQQL G N+VR VAMSA D GLMR M V+D  T L
Sbjct: 40  LPNIYNALIVKSRDTADKQINVTCEVQQLLGNNRVRAVAMSATD-GLMRGMEVIDTGTPL 99

Query: 61  SVLVSRAILGRIPNVLEEPIDNLSPVDT 89
           SV V  A LGRI NVL EPIDNL PVDT
Sbjct: 100 SVPVGGATLGRIFNVLGEPIDNLGPVDT 126

[Close]

BLAST of Clc02G07207 vs. ExPASy Swiss-Prot
Match: A4GG90 (ATP synthase subunit beta, chloroplastic OS=Phaseolus vulgaris OX=3885 GN=atpB PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 9.3e-24
Identity = 62/88 (70.45%), Postives = 66/88 (75.00%), Query Frame = 0


Query: 1   MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFL 60
           MPNIYNALVVK +D    +INVTCEVQQL G N+VR VAMSA D GLMR M V+D  T L
Sbjct: 40  MPNIYNALVVKGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATD-GLMRGMEVIDTGTPL 99

Query: 61  SVLVSRAILGRIPNVLEEPIDNLSPVDT 89
           SV V  A LGRI NVL EPIDNL PVDT
Sbjct: 100 SVPVGGATLGRIFNVLGEPIDNLGPVDT 126

[Close]

BLAST of Clc02G07207 vs. ExPASy Swiss-Prot
Match: Q6QBP2 (ATP synthase subunit beta, chloroplastic OS=Castanea sativa OX=21020 GN=atpB PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.6e-23
Identity = 61/88 (69.32%), Postives = 66/88 (75.00%), Query Frame = 0


Query: 1   MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFL 60
           MPNIYNALVVK +D A  +INVTCEVQQL G N+VR VAMSA D GLMR M V+D    L
Sbjct: 40  MPNIYNALVVKGRDTAGQQINVTCEVQQLLGNNRVRAVAMSATD-GLMRGMEVIDTGAPL 99

Query: 61  SVLVSRAILGRIPNVLEEPIDNLSPVDT 89
           SV V  A LGRI NVL EP+DNL PVDT
Sbjct: 100 SVPVGGATLGRIFNVLGEPVDNLGPVDT 126

[Close]

BLAST of Clc02G07207 vs. ExPASy TrEMBL
Match: Q29VC0 (ATP synthase subunit beta (Fragment) OS=Lepidobotrys staudtii OX=125033 GN=atpB PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.4e-22
Identity = 64/88 (72.73%), Postives = 68/88 (77.27%), Query Frame = 0


Query: 1   MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFL 60
           MPNIYNALVVK +D A  +INVTCEVQQL G NQVR VAMSA D GLMR M V+DM T L
Sbjct: 23  MPNIYNALVVKGRDTAGHQINVTCEVQQLLGNNQVRAVAMSATD-GLMRGMEVIDMGTPL 82

Query: 61  SVLVSRAILGRIPNVLEEPIDNLSPVDT 89
           SV V  A LGRI NVL EP+DNL PVDT
Sbjct: 83  SVPVGGATLGRIFNVLGEPVDNLGPVDT 109

[Close]

BLAST of Clc02G07207 vs. ExPASy TrEMBL
Match: Q29VA6 (ATP synthase subunit beta (Fragment) OS=Ruptiliocarpon caracolito OX=125035 GN=atpB PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.4e-22
Identity = 64/88 (72.73%), Postives = 68/88 (77.27%), Query Frame = 0


Query: 1   MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFL 60
           MPNIYNALVVK +D A  +INVTCEVQQL G NQVR VAMSA D GLMR M V+DM T L
Sbjct: 29  MPNIYNALVVKGRDTAGHQINVTCEVQQLLGNNQVRAVAMSATD-GLMRGMEVIDMGTPL 88

Query: 61  SVLVSRAILGRIPNVLEEPIDNLSPVDT 89
           SV V  A LGRI NVL EP+DNL PVDT
Sbjct: 89  SVPVGGATLGRIFNVLGEPVDNLGPVDT 115

[Close]

BLAST of Clc02G07207 vs. ExPASy TrEMBL
Match: Q4KU58 (ATP synthase subunit beta (Fragment) OS=Ruptiliocarpon caracolito OX=125035 GN=atpB PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.4e-22
Identity = 64/88 (72.73%), Postives = 68/88 (77.27%), Query Frame = 0


Query: 1   MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFL 60
           MPNIYNALVVK +D A  +INVTCEVQQL G NQVR VAMSA D GLMR M V+DM T L
Sbjct: 32  MPNIYNALVVKGRDTAGHQINVTCEVQQLLGNNQVRAVAMSATD-GLMRGMEVIDMGTPL 91

Query: 61  SVLVSRAILGRIPNVLEEPIDNLSPVDT 89
           SV V  A LGRI NVL EP+DNL PVDT
Sbjct: 92  SVPVGGATLGRIFNVLGEPVDNLGPVDT 118

[Close]

BLAST of Clc02G07207 vs. ExPASy TrEMBL
Match: W1ILW8 (ATP synthase subunit beta, chloroplastic OS=Pinguicula ehlersiae OX=192264 GN=atpB PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 3.1e-22
Identity = 63/88 (71.59%), Postives = 67/88 (76.14%), Query Frame = 0


Query: 1   MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFL 60
           MPNIYNAL+VK +D A   INVTCEVQQL G N+VR VAMSA D GLMRRM V+DM   L
Sbjct: 40  MPNIYNALIVKGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATD-GLMRRMEVIDMGAPL 99

Query: 61  SVLVSRAILGRIPNVLEEPIDNLSPVDT 89
           SV V  A LGRI NVL EPIDNL PVDT
Sbjct: 100 SVPVGGATLGRIFNVLGEPIDNLGPVDT 126

[Close]

BLAST of Clc02G07207 vs. ExPASy TrEMBL
Match: A0A343UPW1 (ATP synthase subunit beta, chloroplastic OS=Fritillaria pallidiflora OX=152091 GN=atpB PE=3 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 4.0e-22
Identity = 62/88 (70.45%), Postives = 68/88 (77.27%), Query Frame = 0


Query: 1   MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFL 60
           MPNIYNALVVK +D A P+INVTCEVQQL G N+VR VAM+A D GLMR M V+D  T L
Sbjct: 40  MPNIYNALVVKGRDTAGPQINVTCEVQQLLGNNRVRAVAMNATD-GLMRGMEVIDTGTPL 99

Query: 61  SVLVSRAILGRIPNVLEEPIDNLSPVDT 89
           SV V  A LGRI NVL EP+DNL PVDT
Sbjct: 100 SVPVGGATLGRIFNVLGEPVDNLGPVDT 126

[Close]

BLAST of Clc02G07207 vs. TAIR 10
Match: ATCG00480.1 (ATP synthase subunit beta )

HSP 1 Score: 107.5 bits (267), Expect = 7.3e-24
Identity = 60/88 (68.18%), Postives = 66/88 (75.00%), Query Frame = 0


Query: 1   MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFL 60
           MPNIYNALVVK +D    +INVTCEVQQL G N+VR VAMSA + GL R M+VVDM   L
Sbjct: 40  MPNIYNALVVKGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATE-GLKRGMDVVDMGNPL 99

Query: 61  SVLVSRAILGRIPNVLEEPIDNLSPVDT 89
           SV V  A LGRI NVL EP+DNL PVDT
Sbjct: 100 SVPVGGATLGRIFNVLGEPVDNLGPVDT 126

[Close]

BLAST of Clc02G07207 vs. TAIR 10
Match: AT5G08670.1 (ATP synthase alpha/beta family protein )

HSP 1 Score: 48.5 bits (114), Expect = 4.0e-06
Identity = 33/88 (37.50%), Postives = 46/88 (52.27%), Query Frame = 0


Query: 1   MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFL 60
           +P I  +L V+D         +  EV    G+N VR +AM   + GL+R   V++    +
Sbjct: 104 LPPIMTSLEVQDH-----PTRLVLEVSHHLGQNVVRTIAMDGTE-GLVRGRKVLNTGAPI 163

Query: 61  SVLVSRAILGRIPNVLEEPIDNLSPVDT 89
           +V V RA LGRI NVL EPID    + T
Sbjct: 164 TVPVGRATLGRIMNVLGEPIDERGEIKT 185

[Close]

BLAST of Clc02G07207 vs. TAIR 10
Match: AT5G08680.1 (ATP synthase alpha/beta family protein )

HSP 1 Score: 48.5 bits (114), Expect = 4.0e-06
Identity = 33/88 (37.50%), Postives = 46/88 (52.27%), Query Frame = 0


Query: 1   MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFL 60
           +P I  +L V+D         +  EV    G+N VR +AM   + GL+R   V++    +
Sbjct: 107 LPPIMTSLEVQDH-----PTRLVLEVSHHLGQNVVRTIAMDGTE-GLVRGRKVLNTGAPI 166

Query: 61  SVLVSRAILGRIPNVLEEPIDNLSPVDT 89
           +V V RA LGRI NVL EPID    + T
Sbjct: 167 TVPVGRATLGRIMNVLGEPIDERGEIKT 188

[Close]

BLAST of Clc02G07207 vs. TAIR 10
Match: AT5G08690.1 (ATP synthase alpha/beta family protein )

HSP 1 Score: 48.5 bits (114), Expect = 4.0e-06
Identity = 33/88 (37.50%), Postives = 46/88 (52.27%), Query Frame = 0


Query: 1   MPNIYNALVVKDQDPASPKINVTCEVQQLFGKNQVRLVAMSAIDHGLMRRMNVVDMKTFL 60
           +P I  +L V+D         +  EV    G+N VR +AM   + GL+R   V++    +
Sbjct: 104 LPPIMTSLEVQDH-----PTRLVLEVSHHLGQNVVRTIAMDGTE-GLVRGRKVLNTGAPI 163

Query: 61  SVLVSRAILGRIPNVLEEPIDNLSPVDT 89
           +V V RA LGRI NVL EPID    + T
Sbjct: 164 TVPVGRATLGRIMNVLGEPIDERGEIKT 185

The following BLAST results are available for this feature:

BLAST of Clc02G07207 vs. NCBI nr


Match Name	E-value	Identity	Description
AAX63018.1	2.9e-22	72.73	ATP synthase beta subunit, partial [Ruptiliocarpon caracolito]	[more]
AAY19335.1	2.9e-22	72.73	ATP synthase beta subunit, partial [Ruptiliocarpon caracolito]	[more]
AAY19321.1	2.9e-22	72.73	ATP synthase beta subunit, partial [Lepidobotrys staudtii]	[more]
YP_010121652.1	6.4e-22	70.45	ATP synthase CF1 beta subunit [Micranthes melanocentra] >QRE78683.1 ATP synthase...	[more]
YP_009002262.1	6.4e-22	71.59	ATP synthase CF1 beta subunit [Pinguicula ehlersiae] >CDL78818.1 ATP synthase CF...	[more]

BLAST of Clc02G07207 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0ZZ42	4.2e-24	70.45	ATP synthase subunit beta, chloroplastic OS=Gossypium barbadense OX=3634 GN=atpB...	[more]
Q6L392	7.1e-24	69.32	ATP synthase subunit beta, chloroplastic OS=Saccharum hybrid OX=15819 GN=atpB PE...	[more]
Q6ENV6	7.1e-24	69.32	ATP synthase subunit beta, chloroplastic OS=Saccharum officinarum OX=4547 GN=atp...	[more]
A4GG90	9.3e-24	70.45	ATP synthase subunit beta, chloroplastic OS=Phaseolus vulgaris OX=3885 GN=atpB P...	[more]
Q6QBP2	1.6e-23	69.32	ATP synthase subunit beta, chloroplastic OS=Castanea sativa OX=21020 GN=atpB PE=...	[more]

BLAST of Clc02G07207 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
Q29VC0	1.4e-22	72.73	ATP synthase subunit beta (Fragment) OS=Lepidobotrys staudtii OX=125033 GN=atpB ...	[more]
Q29VA6	1.4e-22	72.73	ATP synthase subunit beta (Fragment) OS=Ruptiliocarpon caracolito OX=125035 GN=a...	[more]
Q4KU58	1.4e-22	72.73	ATP synthase subunit beta (Fragment) OS=Ruptiliocarpon caracolito OX=125035 GN=a...	[more]
W1ILW8	3.1e-22	71.59	ATP synthase subunit beta, chloroplastic OS=Pinguicula ehlersiae OX=192264 GN=at...	[more]
A0A343UPW1	4.0e-22	70.45	ATP synthase subunit beta, chloroplastic OS=Fritillaria pallidiflora OX=152091 G...	[more]

BLAST of Clc02G07207 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00480.1	7.3e-24	68.18	ATP synthase subunit beta	[more]
AT5G08670.1	4.0e-06	37.50	ATP synthase alpha/beta family protein	[more]
AT5G08680.1	4.0e-06	37.50	ATP synthase alpha/beta family protein	[more]
AT5G08690.1	4.0e-06	37.50	ATP synthase alpha/beta family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004100	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain	PFAM	PF02874	ATP-synt_ab_N	coord: 1..55 e-value: 9.6E-8 score: 32.4
None	No IPR available	GENE3D	2.40.10.170		coord: 1..58 e-value: 2.0E-13 score: 52.2
None	No IPR available	PANTHER	PTHR15184:SF65	F0F1-TYPE ATP SYNTHASE, BETA SUBUNIT	coord: 1..89
None	No IPR available	PANTHER	PTHR15184	ATP SYNTHASE	coord: 1..89
IPR036121	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily	SUPERFAMILY	50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase	coord: 1..56

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G07207.1	Clc02G07207.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006754	ATP biosynthetic process
biological_process	GO:1902600	proton transmembrane transport
biological_process	GO:0046034	ATP metabolic process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0031090	organelle membrane
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0015078	proton transmembrane transporter activity