Clc02G07090 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G07090
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Gibberellin-regulated family protein
Location	ClcChr02: 7173828 .. 7175583 (-)
RNA-Seq Expression	Clc02G07090
Synteny	Clc02G07090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAGTCCACGCGCTTGGATTTATGAATTGAGTTTAGAATTCTCCAACTCTCTCTCTCTGTTTCTTGTTTAAAAGCACTTACTCCACAAACTCCTTTGTGCTTTGTTGAGAAACAAATCTGAGATTTCATTTCTCTAATCTGAAAGATCAAAGATGAGAACTCAGATTTTTCTTCTCGGTTTGTTCTTCTGTTTTCTTCTCTTAAGTGCTTCTTTCATGGACACCGTCATGGCCGACTCTGGTACTTTCTTTCTTCTTCAACATTCTTTCCTCTCTTCTGAGTTTCATCATTTGTTTTTTTTTTTTAACTATATGTCAACTATTTTCTTACTTGACATGTTTTTTTTTCTGAACTTGGTGAAAACAGCCGATTAACCGAATGAGACCACCACATTGTAGTTATTAGGAGTAGACAGATTATATCTAGTGGTTATTACATACAAGAATCTACATCTAATGATTATTATGAAGTAGTCACGTTGTGGTACACTTGTTGAATATTTTTTATTTGACAACAAATTGCAAAAATCACTACTAAAGTATGGTGGTAGTTTCAATTACACATTCAAACTTTCAACTGTAAAATTGAGCCATCGAACTTATACAAGTGTTAAAATTTGGACCTTCAATAGTATAAATTTGAGAGTTCAACTTCTACAATTATTATAAGTTAGAGGGTCCAAATTTTATGCTCATATAAGTTTGAGAGCTCAATTTTATGCTCGTAACTGCAACTATCATACTTCATAAGTGGTTTTTGTAATTTTTCTTTTTTTTTTTTTTTTTTTGTTTTTCCTTAAAAAAGACATGTCATAGGTAAGAAAGCAATTACGATTGTGTTAACTTGGACATAATTTGGGAGTATTCACAAAAATCTAAAAATTAGTAACTCTAGTCCTCTTGAATCAAATTTATTCTCTAAAATGTGACCAAGATTCATGTTCTTTAACTCATGACTCGTCTAATCTCATGATATTTTGTTTTAAAAAAGTAACAACAGAAGTTTCATCAAACTTATTAATCACATCCATTAATTTTATATTATTCACTGCCTTAATAAAGAATAACAAAATTAGTAAACAAGATAACAAACATGAGTATCGTAACACAGATGGATCACGTCATCACAATCTATAAGAAAATAAAAAGATAAAGAATGAGTTCAAACCATATTTACAACCAAATTAAAATTTAGTATCACACTAGTTGTCTTATTAAAACGAAATTATACGAAAAGCAAATTGATTATGAATGATGATATGTGGAATGTGTTCGGGATCGAGGGAAGATGTGTGCACAAGACCGTGCAGGAAGAGGTGCTCGAAAGCGAAGCTGAAGCGTCGGTGCATGAAGTATTGTAGGATATGTTGTAGTAAATGCAAGTGTGTGCCAGGGAGTTATGGCAAGCACCATTGCCCTTGCTATAGCCATGTTCACACCCTTAGGGGTAGGGCCAAGTGCCCTTAATTTTAAGACCATTTATTGTCCCTTGTAAAACAAACCACCTAAATATTATTACAAGGACACCAATAATTTTGTGTCTCAATTAAATACTAATGCTTCAAAGTTTGAATGTGAGGTTTGGTATGTTTTTTAATACACAATGTGTACTTATGAGATCTACCTTATTTTATTTTATTATTTAAGGCCCTCTTCTATTCTATCTATGTATACCTAAAAGATCCTATGGTTGTTGGGTTTTCATTCAATAAAAAAGTATATAAGATTGTTAGTTTTCTTCCATAATTTGTTTGGTC

mRNA sequence

CAAGTCCACGCGCTTGGATTTATGAATTGAGTTTAGAATTCTCCAACTCTCTCTCTCTGTTTCTTGTTTAAAAGCACTTACTCCACAAACTCCTTTGTGCTTTGTTGAGAAACAAATCTGAGATTTCATTTCTCTAATCTGAAAGATCAAAGATGAGAACTCAGATTTTTCTTCTCGGTTTGTTCTTCTGTTTTCTTCTCTTAAGTGCTTCTTTCATGGACACCGTCATGGCCGACTCTGATGTGTGCACAAGACCGTGCAGGAAGAGGTGCTCGAAAGCGAAGCTGAAGCGTCGGTGCATGAAGTATTGTAGGATATGTTGTAGTAAATGCAAGTGTGTGCCAGGGAGTTATGGCAAGCACCATTGCCCTTGCTATAGCCATGTTCACACCCTTAGGGGTAGGGCCAAGTGCCCTTAATTTTAAGACCATTTATTGTCCCTTGTAAAACAAACCACCTAAATATTATTACAAGGACACCAATAATTTTGTGTCTCAATTAAATACTAATGCTTCAAAGTTTGAATGTGAGGTTTGGTATGTTTTTTAATACACAATGTGTACTTATGAGATCTACCTTATTTTATTTTATTATTTAAGGCCCTCTTCTATTCTATCTATGTATACCTAAAAGATCCTATGGTTGTTGGGTTTTCATTCAATAAAAAAGTATATAAGATTGTTAGTTTTCTTCCATAATTTGTTTGGTC

Coding sequence (CDS)

ATGAGAACTCAGATTTTTCTTCTCGGTTTGTTCTTCTGTTTTCTTCTCTTAAGTGCTTCTTTCATGGACACCGTCATGGCCGACTCTGATGTGTGCACAAGACCGTGCAGGAAGAGGTGCTCGAAAGCGAAGCTGAAGCGTCGGTGCATGAAGTATTGTAGGATATGTTGTAGTAAATGCAAGTGTGTGCCAGGGAGTTATGGCAAGCACCATTGCCCTTGCTATAGCCATGTTCACACCCTTAGGGGTAGGGCCAAGTGCCCTTAA

Protein sequence

MRTQIFLLGLFFCFLLLSASFMDTVMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGSYGKHHCPCYSHVHTLRGRAKCP

Homology

[Close]

BLAST of Clc02G07090 vs. NCBI nr
Match: KAG7022485.1 (Snakin-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 160.6 bits (405), Expect = 6.1e-36
Identity = 72/88 (81.82%), Postives = 79/88 (89.77%), Query Frame = 0


Query: 1  MRTQIFLLGLFFCFLLLSASFMDTVMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKC 60
          MR QI ++G F CFLLLSASFM+T MA +DVCTRPCRKRCS AKLKR+CMK+CRICC KC
Sbjct: 1  MRGQILIVGCFLCFLLLSASFMETAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKC 60

Query: 61 KCVPGSYGKHHCPCYSHVHTLRGRAKCP 89
          KCVPG+YGK HCPCYSHVHTLRGRAKCP
Sbjct: 61 KCVPGAYGKRHCPCYSHVHTLRGRAKCP 88

[Close]

BLAST of Clc02G07090 vs. NCBI nr
Match: KAG6588701.1 (Snakin-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 134.8 bits (338), Expect = 3.6e-28
Identity = 57/67 (85.07%), Postives = 62/67 (92.54%), Query Frame = 0


Query: 22 MDTVMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVPGSYGKHHCPCYSHVHTL 81
          M+T MA +DVCTRPCRKRCS AKLKR+CMK+CRICC KCKCVPG+YGK HCPCYSHVHTL
Sbjct: 1  METAMAGADVCTRPCRKRCSHAKLKRKCMKFCRICCGKCKCVPGAYGKRHCPCYSHVHTL 60

Query: 82 RGRAKCP 89
          RGRAKCP
Sbjct: 61 RGRAKCP 67

[Close]

BLAST of Clc02G07090 vs. NCBI nr
Match: KAA0044354.1 (peamaclein-like [Cucumis melo var. makuwa] >TYK29483.1 peamaclein-like [Cucumis melo var. makuwa])

HSP 1 Score: 98.2 bits (243), Expect = 3.7e-17
Identity = 47/87 (54.02%), Postives = 60/87 (68.97%), Query Frame = 0


Query: 4  QIFLLGLFFCFLLLSASFMDTVMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCV 63
          ++F      CFLL ++SF+DTV A    C + C+KRCS+A +K RCMKYC ICC  CKCV
Sbjct: 3  KLFFFTFLLCFLLFTSSFIDTVNAKPVFCDKKCKKRCSRAGVKDRCMKYCGICCGYCKCV 62

Query: 64 P-GSYG-KHHCPCYSHVHTLRGRAKCP 89
          P G+YG KH CPCY  + + +GR KCP
Sbjct: 63 PSGTYGNKHECPCYRDMRSSKGRPKCP 89

[Close]

BLAST of Clc02G07090 vs. NCBI nr
Match: KAE8008067.1 (hypothetical protein FH972_004614 [Carpinus fangiana])

HSP 1 Score: 97.8 bits (242), Expect = 4.9e-17
Identity = 49/81 (60.49%), Postives = 57/81 (70.37%), Query Frame = 0


Query: 10 LFFCFLLLSASFMDTVMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG 69
          L  C LLLS+SF++ VMA S  CT  C  RCSKA +K RCMKYC ICC +CKCVP G+YG
Sbjct: 8  LLLCSLLLSSSFLEPVMAVSGFCTNKCSDRCSKAGVKDRCMKYCGICCEECKCVPSGTYG 67

Query: 70 -KHHCPCYSHVHTLRGRAKCP 89
           KH CPCY      +G+AKCP
Sbjct: 68 NKHECPCYRDKKNNKGKAKCP 88

[Close]

BLAST of Clc02G07090 vs. NCBI nr
Match: KAE8649034.1 (hypothetical protein Csa_014887 [Cucumis sativus])

HSP 1 Score: 97.1 bits (240), Expect = 8.3e-17
Identity = 47/87 (54.02%), Postives = 60/87 (68.97%), Query Frame = 0


Query: 4  QIFLLGLFFCFLLLSASFMDTVMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCV 63
          ++FL     CFLL ++SF+D V A    C + C+KRCSKA +K RC+KYC ICC  CKCV
Sbjct: 3  KLFLFTFLLCFLLFTSSFIDIVNAKPVFCDKKCKKRCSKAGVKDRCIKYCGICCGYCKCV 62

Query: 64 P-GSYG-KHHCPCYSHVHTLRGRAKCP 89
          P G+YG KH CPCY  + + +GR KCP
Sbjct: 63 PSGTYGNKHECPCYRDMRSSKGRPKCP 89

[Close]

BLAST of Clc02G07090 vs. ExPASy Swiss-Prot
Match: Q948Z4 (Snakin-1 OS=Solanum tuberosum OX=4113 GN=SN1 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 5.1e-17
Identity = 44/87 (50.57%), Postives = 57/87 (65.52%), Query Frame = 0


Query: 4  QIFLLGLFFCFLLLSASFMDTVMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCV 63
          ++FLL L    L+++ S + T MA S  C   C+ RCSKA L  RC+KYC ICC +CKCV
Sbjct: 2  KLFLLTLLLVTLVITPSLIQTTMAGSSFCDSKCKLRCSKAGLADRCLKYCGICCEECKCV 61

Query: 64 P-GSYG-KHHCPCYSHVHTLRGRAKCP 89
          P G+YG KH CPCY      +G++KCP
Sbjct: 62 PSGTYGNKHECPCYRDKKNSKGKSKCP 88

[Close]

BLAST of Clc02G07090 vs. ExPASy Swiss-Prot
Match: Q8LFM2 (Gibberellin-regulated protein 10 OS=Arabidopsis thaliana OX=3702 GN=GASA10 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 4.9e-12
Identity = 38/77 (49.35%), Postives = 47/77 (61.04%), Query Frame = 0


Query: 15 LLLSASFMDTVMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCK-CVP-GSYG-KHH 74
          LL+++S      ADS  C   C  RCSKA  + RC+KYC ICC KC  CVP G+YG K  
Sbjct: 13 LLITSSLFILSTADSSPCGGKCNVRCSKAGRQDRCLKYCNICCEKCNYCVPSGTYGNKDE 72

Query: 75 CPCYSHVHTLRGRAKCP 89
          CPCY  +   +G +KCP
Sbjct: 73 CPCYRDMKNSKGTSKCP 89

[Close]

BLAST of Clc02G07090 vs. ExPASy Swiss-Prot
Match: O80641 (Gibberellin-regulated protein 8 OS=Arabidopsis thaliana OX=3702 GN=At2g39540 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.4e-11
Identity = 39/87 (44.83%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 4  QIFLLGLFFCFLLLSASFMDTVMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCV 63
          ++ ++  F   LLL++SF     ADS  C   C  RCSKA     C+KYC ICC KC CV
Sbjct: 2  KLVVVQFFIISLLLTSSFSVLSSADSS-CGGKCNVRCSKAGQHEECLKYCNICCQKCNCV 61

Query: 64 P-GSYG-KHHCPCYSHVHTLRGRAKCP 89
          P G++G K  CPCY  +   +G +KCP
Sbjct: 62 PSGTFGHKDECPCYRDMKNSKGGSKCP 87

[Close]

BLAST of Clc02G07090 vs. ExPASy Swiss-Prot
Match: C0HLQ1 (Cypmaclein OS=Cryptomeria japonica OX=3369 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.9e-11
Identity = 31/59 (52.54%), Postives = 40/59 (67.80%), Query Frame = 0


Query: 32 CTRPCRKRCSKAKLKRRCMKYCRICCSKCKCV-PGSYG-KHHCPCYSHVHTLRGRAKCP 89
          C + C +RCSKA    RC+KYC ICC KC CV PG+YG +  CPCY+++   +G  KCP
Sbjct: 5  CDKECNRRCSKASAHDRCLKYCGICCEKCNCVPPGTYGNEDSCPCYANLKNSKGGHKCP 63

[Close]

BLAST of Clc02G07090 vs. ExPASy Swiss-Prot
Match: P86888 (Peamaclein OS=Prunus persica OX=3760 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.9e-11
Identity = 33/62 (53.23%), Postives = 38/62 (61.29%), Query Frame = 0


Query: 29 SDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTLRGRAK 88
          S  C   C  RCSKA  + RC+KYC ICC KC CVP G+YG K  CPCY  +   +G  K
Sbjct: 2  SSFCDSKCGVRCSKAGYQERCLKYCGICCEKCHCVPSGTYGNKDECPCYRDLKNSKGNPK 61

[Close]

BLAST of Clc02G07090 vs. ExPASy TrEMBL
Match: A0A0A0K2Z1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071570 PE=3 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.5e-40
Identity = 80/88 (90.91%), Postives = 82/88 (93.18%), Query Frame = 0


Query: 1  MRTQIFLLGLFFCFLLLSASFMDTVMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKC 60
          MRT + LLGLFFCFLLLSASFMDT MADSD CTRPCRKRCSKAKLKRRCMKYCRICCSKC
Sbjct: 1  MRTHLLLLGLFFCFLLLSASFMDTAMADSDRCTRPCRKRCSKAKLKRRCMKYCRICCSKC 60

Query: 61 KCVPGSYGKHHCPCYSHVHTLRGRAKCP 89
          KCVPG YGK HCPCYSHVHT+RGRAKCP
Sbjct: 61 KCVPGGYGKRHCPCYSHVHTIRGRAKCP 88

[Close]

BLAST of Clc02G07090 vs. ExPASy TrEMBL
Match: A0A5D3E0A6 (Peamaclein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00810 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.8e-17
Identity = 47/87 (54.02%), Postives = 60/87 (68.97%), Query Frame = 0


Query: 4  QIFLLGLFFCFLLLSASFMDTVMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCV 63
          ++F      CFLL ++SF+DTV A    C + C+KRCS+A +K RCMKYC ICC  CKCV
Sbjct: 3  KLFFFTFLLCFLLFTSSFIDTVNAKPVFCDKKCKKRCSRAGVKDRCMKYCGICCGYCKCV 62

Query: 64 P-GSYG-KHHCPCYSHVHTLRGRAKCP 89
          P G+YG KH CPCY  + + +GR KCP
Sbjct: 63 PSGTYGNKHECPCYRDMRSSKGRPKCP 89

[Close]

BLAST of Clc02G07090 vs. ExPASy TrEMBL
Match: A0A5N6QLL9 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_004614 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.4e-17
Identity = 49/81 (60.49%), Postives = 57/81 (70.37%), Query Frame = 0


Query: 10 LFFCFLLLSASFMDTVMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG 69
          L  C LLLS+SF++ VMA S  CT  C  RCSKA +K RCMKYC ICC +CKCVP G+YG
Sbjct: 8  LLLCSLLLSSSFLEPVMAVSGFCTNKCSDRCSKAGVKDRCMKYCGICCEECKCVPSGTYG 67

Query: 70 -KHHCPCYSHVHTLRGRAKCP 89
           KH CPCY      +G+AKCP
Sbjct: 68 NKHECPCYRDKKNNKGKAKCP 88

[Close]

BLAST of Clc02G07090 vs. ExPASy TrEMBL
Match: A0A2I0KSA4 (peamaclein-like OS=Punica granatum OX=22663 GN=LOC116194728 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 9.0e-17
Identity = 45/84 (53.57%), Postives = 58/84 (69.05%), Query Frame = 0


Query: 7  LLGLFFCFLLLSASFMDTVMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-G 66
          L  +  C  LLS++FM+ VMA S  CT+ C +RC KA +K RC+KYC ICC++CKCVP G
Sbjct: 5  LFAILMCSFLLSSTFMEPVMASSVYCTKKCNERCGKAGVKDRCLKYCNICCAECKCVPSG 64

Query: 67 SYG-KHHCPCYSHVHTLRGRAKCP 89
          +YG KH CPCY      +G+ KCP
Sbjct: 65 TYGNKHQCPCYRDKKNSKGKPKCP 88

[Close]

BLAST of Clc02G07090 vs. ExPASy TrEMBL
Match: A0A4U5QDN8 (Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000108010 PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.2e-16
Identity = 45/87 (51.72%), Postives = 59/87 (67.82%), Query Frame = 0


Query: 4  QIFLLGLFFCFLLLSASFMDTVMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCV 63
          ++FL  L  C LL S+SF++ VMA S  CT+ C  RC+ A ++ RC+KYC ICC +CKCV
Sbjct: 2  KLFLAALLLCSLLFSSSFLEPVMAKSSFCTKKCNTRCANAGIQDRCLKYCGICCEQCKCV 61

Query: 64 P-GSYG-KHHCPCYSHVHTLRGRAKCP 89
          P G+YG KH CPCY      +G+ KCP
Sbjct: 62 PSGTYGNKHECPCYRDKRNSKGKPKCP 88

[Close]

BLAST of Clc02G07090 vs. TAIR 10
Match: AT5G59845.1 (Gibberellin-regulated family protein )

HSP 1 Score: 71.6 bits (174), Expect = 3.5e-13
Identity = 38/77 (49.35%), Postives = 47/77 (61.04%), Query Frame = 0


Query: 15 LLLSASFMDTVMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCK-CVP-GSYG-KHH 74
          LL+++S      ADS  C   C  RCSKA  + RC+KYC ICC KC  CVP G+YG K  
Sbjct: 13 LLITSSLFILSTADSSPCGGKCNVRCSKAGRQDRCLKYCNICCEKCNYCVPSGTYGNKDE 72

Query: 75 CPCYSHVHTLRGRAKCP 89
          CPCY  +   +G +KCP
Sbjct: 73 CPCYRDMKNSKGTSKCP 89

[Close]

BLAST of Clc02G07090 vs. TAIR 10
Match: AT2G39540.1 (Gibberellin-regulated family protein )

HSP 1 Score: 70.1 bits (170), Expect = 1.0e-12
Identity = 39/87 (44.83%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 4  QIFLLGLFFCFLLLSASFMDTVMADSDVCTRPCRKRCSKAKLKRRCMKYCRICCSKCKCV 63
          ++ ++  F   LLL++SF     ADS  C   C  RCSKA     C+KYC ICC KC CV
Sbjct: 2  KLVVVQFFIISLLLTSSFSVLSSADSS-CGGKCNVRCSKAGQHEECLKYCNICCQKCNCV 61

Query: 64 P-GSYG-KHHCPCYSHVHTLRGRAKCP 89
          P G++G K  CPCY  +   +G +KCP
Sbjct: 62 PSGTFGHKDECPCYRDMKNSKGGSKCP 87

[Close]

BLAST of Clc02G07090 vs. TAIR 10
Match: AT2G14900.1 (Gibberellin-regulated family protein )

HSP 1 Score: 65.1 bits (157), Expect = 3.3e-11
Identity = 30/59 (50.85%), Postives = 38/59 (64.41%), Query Frame = 0


Query: 32  CTRPCRKRCSKAKLKRRCMKYCRICCSKCKCVP-GSYG-KHHCPCYSHVHTLRGRAKCP 89
           C + C  RC +A +K RC+KYC ICC  C+CVP G+YG KH C CY    + +G  KCP
Sbjct: 50  CGQKCEGRCKEAGMKDRCLKYCGICCKDCQCVPSGTYGNKHECACYRDKLSSKGTPKCP 108

[Close]

BLAST of Clc02G07090 vs. TAIR 10
Match: AT4G09600.1 (GAST1 protein homolog 3 )

HSP 1 Score: 60.5 bits (145), Expect = 8.0e-10
Identity = 37/95 (38.95%), Postives = 52/95 (54.74%), Query Frame = 0


Query: 2  RTQIFLLGLFFC---FLLLSASFMDTVMADSDV---CTRPCRKRCSKAKLKRRCMKYCRI 61
          R+ + LL + FC   F L   +  D+ + +  V   C   C+ RCSK+     C++ C  
Sbjct: 5  RSTLVLLLILFCLTTFELHVHAAEDSQVGEGVVKIDCGGRCKGRCSKSSRPNLCLRACNS 64

Query: 62 CCSKCKCV-PGSYGKHH-CPCYSHVHTLRGRAKCP 89
          CC +C CV PG+ G HH CPCY+ + T  GR KCP
Sbjct: 65 CCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKCP 99

[Close]

BLAST of Clc02G07090 vs. TAIR 10
Match: AT4G09610.1 (GAST1 protein homolog 2 )

HSP 1 Score: 60.5 bits (145), Expect = 8.0e-10
Identity = 28/59 (47.46%), Postives = 37/59 (62.71%), Query Frame = 0


Query: 32 CTRPCRKRCSKAKLKRRCMKYCRICCSKCKCV-PGSYGKHH-CPCYSHVHTLRGRAKCP 89
          C   C+ RCSK+   + C++ C  CCS+C CV PG+ G  H CPCY+ + T  GR KCP
Sbjct: 41 CGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKCP 99

The following BLAST results are available for this feature:

BLAST of Clc02G07090 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022485.1	6.1e-36	81.82	Snakin-1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6588701.1	3.6e-28	85.07	Snakin-1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAA0044354.1	3.7e-17	54.02	peamaclein-like [Cucumis melo var. makuwa] >TYK29483.1 peamaclein-like [Cucumis ...	[more]
KAE8008067.1	4.9e-17	60.49	hypothetical protein FH972_004614 [Carpinus fangiana]	[more]
KAE8649034.1	8.3e-17	54.02	hypothetical protein Csa_014887 [Cucumis sativus]	[more]

BLAST of Clc02G07090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q948Z4	5.1e-17	50.57	Snakin-1 OS=Solanum tuberosum OX=4113 GN=SN1 PE=1 SV=1	[more]
Q8LFM2	4.9e-12	49.35	Gibberellin-regulated protein 10 OS=Arabidopsis thaliana OX=3702 GN=GASA10 PE=2 ...	[more]
O80641	1.4e-11	44.83	Gibberellin-regulated protein 8 OS=Arabidopsis thaliana OX=3702 GN=At2g39540 PE=...	[more]
C0HLQ1	1.9e-11	52.54	Cypmaclein OS=Cryptomeria japonica OX=3369 PE=1 SV=1	[more]
P86888	1.9e-11	53.23	Peamaclein OS=Prunus persica OX=3760 PE=1 SV=1	[more]

BLAST of Clc02G07090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2Z1	1.5e-40	90.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071570 PE=3 SV=1	[more]
A0A5D3E0A6	1.8e-17	54.02	Peamaclein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G0081...	[more]
A0A5N6QLL9	2.4e-17	60.49	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_004614 PE=3 SV=1	[more]
A0A2I0KSA4	9.0e-17	53.57	peamaclein-like OS=Punica granatum OX=22663 GN=LOC116194728 PE=3 SV=1	[more]
A0A4U5QDN8	1.2e-16	51.72	Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000108010 PE=3 SV=1	[more]

BLAST of Clc02G07090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59845.1	3.5e-13	49.35	Gibberellin-regulated family protein	[more]
AT2G39540.1	1.0e-12	44.83	Gibberellin-regulated family protein	[more]
AT2G14900.1	3.3e-11	50.85	Gibberellin-regulated family protein	[more]
AT4G09600.1	8.0e-10	38.95	GAST1 protein homolog 3	[more]
AT4G09610.1	8.0e-10	47.46	GAST1 protein homolog 2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 32..88 e-value: 2.1E-14 score: 53.4
None	No IPR available	PANTHER	PTHR23201:SF111	GIBBERELLIN-REGULATED PROTEIN 10	coord: 7..88
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 7..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G07090.1	Clc02G07090.1	mRNA