Clc02G07040 (gene) Watermelon (cordophanus) v2

Overview
NameClc02G07040
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Descriptionzinc finger protein 4-like
LocationClcChr02: 7104829 .. 7105452 (+)
RNA-Seq ExpressionClc02G07040
SyntenyClc02G07040
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGAAGATAATGAAGAAACAGCAGAATTAAGAGATACCCAAAAGCCAGGTGAATCAAGTTCAACCAAAATCAATAGAAATGAATCAATAGCAAATGAAAATCTTGCAAAAGGGTGGCTGAATTTGAGCTTGGGTGGGAATTTTCAGCCCTCAAATGGCATAGATTCTGATTCTCAGCCATTGATGAACAACCCAAACAATTCAAATGCAAAGATGTTTTCTTGTAACTTCTGTATGAGGAAATTCTACAGCTCACAAGCATTGGGAGGCCACCAAAATGCTCACAAAAGGGAGAGAGGAGCAGCAAGAAGATACCAATTTCAAAGAATAATGGCCATGATGGGTTTGCCTCCATTAATGAATAATGCTGCTAATTTAATGGTAAGATCTTTGTGTGTTAGGCCTCATTCTCTTCTTCTGCAGAGGCCAAATAGAGAATCCCATGGCCATGGAGGATCAGCTGCCACTGTCGCAAGGTTCGACAGTGCCGCCACTGCCACCTCTGCGGTCGCTTGTAGTTCAGAGGATGATTTGATGGACATAACTTGGCCAGGGAGTTTCCGATTGAACACACAACAAATGGAGCCCCCGATGAAACTGGATTTGAATTTAAAGCTTTAG

mRNA sequence

ATGATGGAAGATAATGAAGAAACAGCAGAATTAAGAGATACCCAAAAGCCAGGTGAATCAAGTTCAACCAAAATCAATAGAAATGAATCAATAGCAAATGAAAATCTTGCAAAAGGGTGGCTGAATTTGAGCTTGGGTGGGAATTTTCAGCCCTCAAATGGCATAGATTCTGATTCTCAGCCATTGATGAACAACCCAAACAATTCAAATGCAAAGATGTTTTCTTGTAACTTCTGTATGAGGAAATTCTACAGCTCACAAGCATTGGGAGGCCACCAAAATGCTCACAAAAGGGAGAGAGGAGCAGCAAGAAGATACCAATTTCAAAGAATAATGGCCATGATGGGTTTGCCTCCATTAATGAATAATGCTGCTAATTTAATGGTAAGATCTTTGTGTGTTAGGCCTCATTCTCTTCTTCTGCAGAGGCCAAATAGAGAATCCCATGGCCATGGAGGATCAGCTGCCACTGTCGCAAGGTTCGACAGTGCCGCCACTGCCACCTCTGCGGTCGCTTGTAGTTCAGAGGATGATTTGATGGACATAACTTGGCCAGGGAGTTTCCGATTGAACACACAACAAATGGAGCCCCCGATGAAACTGGATTTGAATTTAAAGCTTTAG

Coding sequence (CDS)

ATGATGGAAGATAATGAAGAAACAGCAGAATTAAGAGATACCCAAAAGCCAGGTGAATCAAGTTCAACCAAAATCAATAGAAATGAATCAATAGCAAATGAAAATCTTGCAAAAGGGTGGCTGAATTTGAGCTTGGGTGGGAATTTTCAGCCCTCAAATGGCATAGATTCTGATTCTCAGCCATTGATGAACAACCCAAACAATTCAAATGCAAAGATGTTTTCTTGTAACTTCTGTATGAGGAAATTCTACAGCTCACAAGCATTGGGAGGCCACCAAAATGCTCACAAAAGGGAGAGAGGAGCAGCAAGAAGATACCAATTTCAAAGAATAATGGCCATGATGGGTTTGCCTCCATTAATGAATAATGCTGCTAATTTAATGGTAAGATCTTTGTGTGTTAGGCCTCATTCTCTTCTTCTGCAGAGGCCAAATAGAGAATCCCATGGCCATGGAGGATCAGCTGCCACTGTCGCAAGGTTCGACAGTGCCGCCACTGCCACCTCTGCGGTCGCTTGTAGTTCAGAGGATGATTTGATGGACATAACTTGGCCAGGGAGTTTCCGATTGAACACACAACAAATGGAGCCCCCGATGAAACTGGATTTGAATTTAAAGCTTTAG

Protein sequence

MMEDNEETAELRDTQKPGESSSTKINRNESIANENLAKGWLNLSLGGNFQPSNGIDSDSQPLMNNPNNSNAKMFSCNFCMRKFYSSQALGGHQNAHKRERGAARRYQFQRIMAMMGLPPLMNNAANLMVRSLCVRPHSLLLQRPNRESHGHGGSAATVARFDSAATATSAVACSSEDDLMDITWPGSFRLNTQQMEPPMKLDLNLKL
Homology
BLAST of Clc02G07040 vs. NCBI nr
Match: KAG6571937.1 (Zinc finger protein 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 312.4 bits (799), Expect = 3.0e-81
Identity = 172/217 (79.26%), Postives = 184/217 (84.79%), Query Frame = 0

Query: 2   MEDNEETAEL-RDTQKPGESSSTKINRNESIANENLAKGWLNLSLGGNFQPSNGI-DSDS 61
           MED EE AEL   TQKPGESS T+INRNES ANEN A+GWLNLSLGGN QPSNG  DSDS
Sbjct: 1   MEDREEAAELTATTQKPGESSPTRINRNESTANENPARGWLNLSLGGNLQPSNGTDDSDS 60

Query: 62  QPLMNNPNNSN----AKMFSCNFCMRKFYSSQALGGHQNAHKRERGAARRYQFQRIMAMM 121
           QPLMN P++S+    AKMFSCN+CMRKFYSSQALGGHQNAHKRERGAARRYQFQ+IMAMM
Sbjct: 61  QPLMNKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMM 120

Query: 122 GLPPLMNNAANLMVRSLCVRPHSLLLQRPNRESHGHGGSAATVARFDSAATATSAVACSS 181
           GLPPLMNNAAN MVRSL VRPHSLLLQRPNRE  GHGGS+ATVARF  AAT ++A AC+ 
Sbjct: 121 GLPPLMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAAT-SAAAACTL 180

Query: 182 EDDLMDITWPGSFRLNTQQ-----MEPPMKLDLNLKL 208
           EDD MDITWPGSFRLNTQQ     M  P+KLDLNLKL
Sbjct: 181 EDDFMDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL 216

BLAST of Clc02G07040 vs. NCBI nr
Match: XP_022952416.1 (zinc finger protein 4-like [Cucurbita moschata] >XP_022952417.1 zinc finger protein 4-like [Cucurbita moschata] >XP_022952418.1 zinc finger protein 4-like [Cucurbita moschata])

HSP 1 Score: 310.8 bits (795), Expect = 8.6e-81
Identity = 172/220 (78.18%), Postives = 184/220 (83.64%), Query Frame = 0

Query: 2   MEDNEETAEL-RDTQKPGESSSTKINRNESIANENLAKGWLNLSLGGNFQPSNGI-DSDS 61
           MED EE AEL   TQKPGESS T+INRNES ANEN A+GWLNLSLGGN QP NG  DSDS
Sbjct: 1   MEDREEAAELTATTQKPGESSPTRINRNESTANENPARGWLNLSLGGNLQPCNGTDDSDS 60

Query: 62  QPLMNNPNNSN----AKMFSCNFCMRKFYSSQALGGHQNAHKRERGAARRYQFQRIMAMM 121
           QPLMN P++S+    AKMFSCN+CMRKFYSSQALGGHQNAHKRERGAARRYQFQ+IMAMM
Sbjct: 61  QPLMNKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMM 120

Query: 122 GLPPLMNNAANLMVRSLCVRPHSLLLQRPNRESHGHGGSAATVARFDSAAT---ATSAVA 181
           GLPPLMNNAAN MVRSL VRPHSLLLQRPNRE  GHGGS+ATVARF  AAT   A++A A
Sbjct: 121 GLPPLMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATSASASAAAA 180

Query: 182 CSSEDDLMDITWPGSFRLNTQQ-----MEPPMKLDLNLKL 208
           C+ EDD MDITWPGSFRLNTQQ     M  P+KLDLNLKL
Sbjct: 181 CTLEDDFMDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL 220

BLAST of Clc02G07040 vs. NCBI nr
Match: XP_022972416.1 (zinc finger protein 4-like [Cucurbita maxima] >XP_022972417.1 zinc finger protein 4-like [Cucurbita maxima] >XP_022972418.1 zinc finger protein 4-like [Cucurbita maxima] >XP_022972419.1 zinc finger protein 4-like [Cucurbita maxima] >XP_022972420.1 zinc finger protein 4-like [Cucurbita maxima])

HSP 1 Score: 309.3 bits (791), Expect = 2.5e-80
Identity = 171/220 (77.73%), Postives = 184/220 (83.64%), Query Frame = 0

Query: 2   MEDNEETAEL-RDTQKPGESSSTKINRNESIANENLAKGWLNLSLGGNFQPSNGI-DSDS 61
           MED EE AEL   TQKP ESS T+INRNES ANEN A+GWLNLSLGGN QPSNG  DSDS
Sbjct: 1   MEDREEAAELTATTQKPSESSPTRINRNESTANENPARGWLNLSLGGNLQPSNGTNDSDS 60

Query: 62  QPLMNNPNNSN----AKMFSCNFCMRKFYSSQALGGHQNAHKRERGAARRYQFQRIMAMM 121
           QPLMN P++S+    AKMFSCN+CMRKFYSSQALGGHQNAHKRERGAARRYQFQ+IMAMM
Sbjct: 61  QPLMNKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMM 120

Query: 122 GLPPLMNNAANLMVRSLCVRPHSLLLQRPNRESHGHGGSAATVARFDSAATA---TSAVA 181
           GLPPLMNNAAN MVRSL VRPHSLLLQRPNRE  GHGGS+ATVARF  AAT+   ++A A
Sbjct: 121 GLPPLMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATSAATSAAAA 180

Query: 182 CSSEDDLMDITWPGSFRLNTQQ-----MEPPMKLDLNLKL 208
           C+ EDD MDITWPGSFRLNTQQ     M  P+KLDLNLKL
Sbjct: 181 CTLEDDFMDITWPGSFRLNTQQQTDPPMSEPLKLDLNLKL 220

BLAST of Clc02G07040 vs. NCBI nr
Match: KAG7011625.1 (Zinc finger protein 7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 307.0 bits (785), Expect = 1.2e-79
Identity = 169/213 (79.34%), Postives = 181/213 (84.98%), Query Frame = 0

Query: 6   EETAEL-RDTQKPGESSSTKINRNESIANENLAKGWLNLSLGGNFQPSNGI-DSDSQPLM 65
           EE AEL   TQKPGESS T+INRNES ANEN A+GWLNLSLGGN QPSNG  DSDSQPLM
Sbjct: 112 EEAAELTATTQKPGESSPTRINRNESTANENPARGWLNLSLGGNLQPSNGTDDSDSQPLM 171

Query: 66  NNPNNSN----AKMFSCNFCMRKFYSSQALGGHQNAHKRERGAARRYQFQRIMAMMGLPP 125
           N P++S+    AKMFSCN+CMRKFYSSQALGGHQNAHKRERGAARRYQFQ+IMAMMGLPP
Sbjct: 172 NKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMMGLPP 231

Query: 126 LMNNAANLMVRSLCVRPHSLLLQRPNRESHGHGGSAATVARFDSAATATSAVACSSEDDL 185
           LMNNAAN MVRSL VRPHSLLLQRPNRE  GHGGS+ATVARF  AAT ++A AC+ EDD 
Sbjct: 232 LMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAAT-SAAAACTLEDDF 291

Query: 186 MDITWPGSFRLNTQQ-----MEPPMKLDLNLKL 208
           MDITWPGSFRLNTQQ     M  P+KLDLNLKL
Sbjct: 292 MDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL 323

BLAST of Clc02G07040 vs. NCBI nr
Match: XP_023553849.1 (zinc finger protein 4-like [Cucurbita pepo subsp. pepo] >XP_023553850.1 zinc finger protein 4-like [Cucurbita pepo subsp. pepo] >XP_023553851.1 zinc finger protein 4-like [Cucurbita pepo subsp. pepo] >XP_023553852.1 zinc finger protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.0 bits (772), Expect = 4.0e-78
Identity = 170/219 (77.63%), Postives = 182/219 (83.11%), Query Frame = 0

Query: 2   MED-NEETAEL-RDTQKPGESSSTKINRNESIANENLAKGWLNLSLGGNFQPSNGI-DSD 61
           MED  EE AEL   TQKPGESS T+I  NES ANEN A+GWLNLSLGGN QPSNG  DSD
Sbjct: 1   MEDREEEAAELTATTQKPGESSPTRIKINESTANENPARGWLNLSLGGNLQPSNGTDDSD 60

Query: 62  SQPLMNNPNNSN-----AKMFSCNFCMRKFYSSQALGGHQNAHKRERGAARRYQFQRIMA 121
           SQPLMN P++S+     AKMFSCN+CMRKFYSSQALGGHQNAHKRERGAARRYQFQ+IMA
Sbjct: 61  SQPLMNKPSSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMA 120

Query: 122 MMGLPPLMNNAANLMVRSLCVRPHSLLLQRPNRESHGHGGSAATVARFDSAATATSAVAC 181
           MMGLPPLMNNAAN MVRSL VRPHSLLLQRPNRE  GHGGS+ATVARF  AAT ++A AC
Sbjct: 121 MMGLPPLMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAAT-SAAAAC 180

Query: 182 SSEDDLMDITWPGSFRLNTQQ-----MEPPMKLDLNLKL 208
           + EDD MDITWPGSFRLNTQQ     M  P+KLDLNLKL
Sbjct: 181 TLEDDFMDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL 218

BLAST of Clc02G07040 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 3.6e-13
Identity = 71/213 (33.33%), Postives = 97/213 (45.54%), Query Frame = 0

Query: 20  SSSTKINRNESIANENLAKGWLNLSLGGNFQPSNGIDSDSQ----PLMNNPNNSN----- 79
           SSS+++  N S   E+     LNLSL  N   +N +D +S     PL +   +SN     
Sbjct: 15  SSSSQVASNLSPVGEDYKPISLNLSLSFNNNNNNNLDLESSSLTLPLSSTSESSNPEQQQ 74

Query: 80  -------AKMFSCNFCMRKFYSSQALGGHQNAHKRERGAARR------------------ 139
                   ++FSCN+C RKFYSSQALGGHQNAHKRER  A+R                  
Sbjct: 75  QQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSN 134

Query: 140 YQFQRIMAMMGLPPLMNNAANLMV--RSLCVRPHS----LLLQRPNRESHGHGGSAATVA 193
           Y      A +   PL  +    M   R+L +R HS    + + R   E+         +A
Sbjct: 135 YAAAATAAALSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVSMTRQTPET-----LIRNIA 194

BLAST of Clc02G07040 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.3e-10
Identity = 65/190 (34.21%), Postives = 89/190 (46.84%), Query Frame = 0

Query: 14  TQKPGESSSTKINR-NESIANENLAKGWLN-LSLGGNFQPSNGIDSDSQPLMNNPNNSNA 73
           T+    S  T  +R  E+ +N++L+K   N +SL      +   D+ S     NP     
Sbjct: 2   TESDDASRETPASRGGEASSNQDLSKPESNHVSLDLKLNDTFNDDTKSTKCEANP----- 61

Query: 74  KMFSCNFCMRKFYSSQALGGHQNAHKRERGAARRYQFQRIMAMMGLPPLMNNAANLMVRS 133
           ++FSCN+C RKFYSSQALGGHQNAHKRER  A+R      M      P    ++     S
Sbjct: 62  RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYTSS-----S 121

Query: 134 LCVRPHSLLLQRPNRESHGHGGSAATVARFDSAATATSAVAC--SSEDDLMDITWPGSFR 193
           L ++ HS LL       H        V+RF       + V      +D   D  WPGSFR
Sbjct: 122 LGMQAHSGLLH------HTLSQPQPLVSRFHHQGYFGNTVPLFFDYDDGGSDFFWPGSFR 175

Query: 194 LNTQQMEPPM 200
              ++ E P+
Sbjct: 182 QVVEEAEAPV 175

BLAST of Clc02G07040 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 8.3e-10
Identity = 39/90 (43.33%), Postives = 51/90 (56.67%), Query Frame = 0

Query: 55  IDSDSQPLMNNPNNSNAKMFSCNFCMRKFYSSQALGGHQNAHKRERGAARRYQFQRIMAM 114
           ID  +  +  +  ++  K+FSCN+C R FYSSQALGGHQNAHKRER  A+R Q     A 
Sbjct: 42  IDDTTSIVNESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASAS 101

Query: 115 -----MGLPPLMNNAANLMVRSLCVRPHSL 140
                 G  PL  +      RSL ++ HS+
Sbjct: 102 AFGHPYGFSPLPFHGQYNNHRSLGIQAHSI 131

BLAST of Clc02G07040 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.1e-09
Identity = 37/76 (48.68%), Postives = 50/76 (65.79%), Query Frame = 0

Query: 43  LSLGGNFQPSNGIDSDSQPLMNNPNNSNAKMFSCNFCMRKFYSSQALGGHQNAHKRERGA 102
           L+L  +F+ S+   S  Q        ++ ++FSCN+C RKFYSSQALGGHQNAHKRER  
Sbjct: 39  LNLIDSFKTSSSSTSHHQ--HQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTL 98

Query: 103 ARRYQFQRIMAMMGLP 119
           A+R Q+ + M +  LP
Sbjct: 99  AKRGQYYK-MTLSSLP 111

BLAST of Clc02G07040 vs. ExPASy Swiss-Prot
Match: Q9FFX4 (Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.4e-09
Identity = 32/73 (43.84%), Postives = 45/73 (61.64%), Query Frame = 0

Query: 72  KMFSCNFCMRKFYSSQALGGHQNAHKRERGAARRYQFQRIMAMMGLPPLMNNAANLMVRS 131
           ++F C +C RKFY+SQALGGHQNAHKRER AARR     +  +   PP++++       +
Sbjct: 36  RLFPCQYCPRKFYTSQALGGHQNAHKRERAAARR----NLGVLANSPPILDD------NN 95

Query: 132 LCVRPHSLLLQRP 145
             +RP+    Q P
Sbjct: 96  TFLRPYPCFYQNP 98

BLAST of Clc02G07040 vs. ExPASy TrEMBL
Match: A0A6J1GK61 (zinc finger protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111455111 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 4.2e-81
Identity = 172/220 (78.18%), Postives = 184/220 (83.64%), Query Frame = 0

Query: 2   MEDNEETAEL-RDTQKPGESSSTKINRNESIANENLAKGWLNLSLGGNFQPSNGI-DSDS 61
           MED EE AEL   TQKPGESS T+INRNES ANEN A+GWLNLSLGGN QP NG  DSDS
Sbjct: 1   MEDREEAAELTATTQKPGESSPTRINRNESTANENPARGWLNLSLGGNLQPCNGTDDSDS 60

Query: 62  QPLMNNPNNSN----AKMFSCNFCMRKFYSSQALGGHQNAHKRERGAARRYQFQRIMAMM 121
           QPLMN P++S+    AKMFSCN+CMRKFYSSQALGGHQNAHKRERGAARRYQFQ+IMAMM
Sbjct: 61  QPLMNKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMM 120

Query: 122 GLPPLMNNAANLMVRSLCVRPHSLLLQRPNRESHGHGGSAATVARFDSAAT---ATSAVA 181
           GLPPLMNNAAN MVRSL VRPHSLLLQRPNRE  GHGGS+ATVARF  AAT   A++A A
Sbjct: 121 GLPPLMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATSASASAAAA 180

Query: 182 CSSEDDLMDITWPGSFRLNTQQ-----MEPPMKLDLNLKL 208
           C+ EDD MDITWPGSFRLNTQQ     M  P+KLDLNLKL
Sbjct: 181 CTLEDDFMDITWPGSFRLNTQQQTEPPMSEPLKLDLNLKL 220

BLAST of Clc02G07040 vs. ExPASy TrEMBL
Match: A0A6J1I5X1 (zinc finger protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111470983 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.2e-80
Identity = 171/220 (77.73%), Postives = 184/220 (83.64%), Query Frame = 0

Query: 2   MEDNEETAEL-RDTQKPGESSSTKINRNESIANENLAKGWLNLSLGGNFQPSNGI-DSDS 61
           MED EE AEL   TQKP ESS T+INRNES ANEN A+GWLNLSLGGN QPSNG  DSDS
Sbjct: 1   MEDREEAAELTATTQKPSESSPTRINRNESTANENPARGWLNLSLGGNLQPSNGTNDSDS 60

Query: 62  QPLMNNPNNSN----AKMFSCNFCMRKFYSSQALGGHQNAHKRERGAARRYQFQRIMAMM 121
           QPLMN P++S+    AKMFSCN+CMRKFYSSQALGGHQNAHKRERGAARRYQFQ+IMAMM
Sbjct: 61  QPLMNKPSSSSAAATAKMFSCNYCMRKFYSSQALGGHQNAHKRERGAARRYQFQKIMAMM 120

Query: 122 GLPPLMNNAANLMVRSLCVRPHSLLLQRPNRESHGHGGSAATVARFDSAATA---TSAVA 181
           GLPPLMNNAAN MVRSL VRPHSLLLQRPNRE  GHGGS+ATVARF  AAT+   ++A A
Sbjct: 121 GLPPLMNNAANFMVRSLGVRPHSLLLQRPNREPLGHGGSSATVARFYGAATSAATSAAAA 180

Query: 182 CSSEDDLMDITWPGSFRLNTQQ-----MEPPMKLDLNLKL 208
           C+ EDD MDITWPGSFRLNTQQ     M  P+KLDLNLKL
Sbjct: 181 CTLEDDFMDITWPGSFRLNTQQQTDPPMSEPLKLDLNLKL 220

BLAST of Clc02G07040 vs. ExPASy TrEMBL
Match: A0A5A7SMP7 (Zinc finger protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001010 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 8.2e-69
Identity = 160/215 (74.42%), Postives = 173/215 (80.47%), Query Frame = 0

Query: 2   MEDNEETAELRDTQKPGESSSTKINRNESIANENLAKGWLNLSLGGNFQPSNGID-SDSQ 61
           MED EET +LRD QK  ES+ST+INRN+SIANENLAKGWLNLSLGGNFQ SN  D SDSQ
Sbjct: 1   MEDREETTKLRDIQKADESNSTRINRNDSIANENLAKGWLNLSLGGNFQTSNDKDYSDSQ 60

Query: 62  PLMNNPNNSNA-KMFSCNFCMRKFYSSQALGGHQNAHKRERGAARRYQFQRIMAMMGLPP 121
           PLMN  NNS+A KMFSC+FCMRKFYSSQALGGHQNAHKRERGAARRYQFQRIM MMGLPP
Sbjct: 61  PLMNKANNSSATKMFSCHFCMRKFYSSQALGGHQNAHKRERGAARRYQFQRIMTMMGLPP 120

Query: 122 LMNNAAN-LMVRSLCVRPHSLLLQRPNRESHGHGGSAATVARFDSAATAT----SAVACS 181
            MNNAAN +M+RSL VRPHSL L       H HG SAATVARF++ ATAT    +   CS
Sbjct: 121 SMNNAANSIMLRSLGVRPHSLRL-------HSHGESAATVARFEN-ATATIGRGTTAFCS 180

Query: 182 SEDD-LMDITWPGSFRLNTQ-QMEPPMKLDLNLKL 208
            ED+ LM ITWPGSFRLNTQ + EP   LDLNLKL
Sbjct: 181 LEDESLMHITWPGSFRLNTQRKTEPSTTLDLNLKL 207

BLAST of Clc02G07040 vs. ExPASy TrEMBL
Match: A0A1S3C0M2 (zinc finger protein 4-like OS=Cucumis melo OX=3656 GN=LOC103495286 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 8.2e-69
Identity = 160/215 (74.42%), Postives = 173/215 (80.47%), Query Frame = 0

Query: 2   MEDNEETAELRDTQKPGESSSTKINRNESIANENLAKGWLNLSLGGNFQPSNGID-SDSQ 61
           MED EET +LRD QK  ES+ST+INRN+SIANENLAKGWLNLSLGGNFQ SN  D SDSQ
Sbjct: 1   MEDREETTKLRDIQKADESNSTRINRNDSIANENLAKGWLNLSLGGNFQTSNDKDYSDSQ 60

Query: 62  PLMNNPNNSNA-KMFSCNFCMRKFYSSQALGGHQNAHKRERGAARRYQFQRIMAMMGLPP 121
           PLMN  NNS+A KMFSC+FCMRKFYSSQALGGHQNAHKRERGAARRYQFQRIM MMGLPP
Sbjct: 61  PLMNKANNSSATKMFSCHFCMRKFYSSQALGGHQNAHKRERGAARRYQFQRIMTMMGLPP 120

Query: 122 LMNNAAN-LMVRSLCVRPHSLLLQRPNRESHGHGGSAATVARFDSAATAT----SAVACS 181
            MNNAAN +M+RSL VRPHSL L       H HG SAATVARF++ ATAT    +   CS
Sbjct: 121 SMNNAANSIMLRSLGVRPHSLRL-------HSHGESAATVARFEN-ATATIGRGTTAFCS 180

Query: 182 SEDD-LMDITWPGSFRLNTQ-QMEPPMKLDLNLKL 208
            ED+ LM ITWPGSFRLNTQ + EP   LDLNLKL
Sbjct: 181 LEDESLMHITWPGSFRLNTQRKTEPSTTLDLNLKL 207

BLAST of Clc02G07040 vs. ExPASy TrEMBL
Match: A0A0A0K2Z6 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G071620 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.2e-67
Identity = 155/216 (71.76%), Postives = 173/216 (80.09%), Query Frame = 0

Query: 1   MMEDNEETAELRDTQKPGESSSTKINRNESIANENLAKGWLNLSLGGNFQPSNGID-SDS 60
           MMED EET +LRD QK  ES+STKINRN++IANENLAKGWLNLSLGGNFQ  N ID SDS
Sbjct: 1   MMEDREETTKLRDIQKADESNSTKINRNDTIANENLAKGWLNLSLGGNFQTLNDIDCSDS 60

Query: 61  QPLMNNPNNSN-AKMFSCNFCMRKFYSSQALGGHQNAHKRERGAARRYQFQRIMAMMGLP 120
           QPLMN  NNS+  KMFSC+FCMRKFYSSQALGGHQNAHKRERGAARRYQFQR+M MMGLP
Sbjct: 61  QPLMNKANNSSPTKMFSCHFCMRKFYSSQALGGHQNAHKRERGAARRYQFQRLMTMMGLP 120

Query: 121 PLM-NNAAN-LMVRSLCVRPHSLLLQRPNRESHGHGGSAATVARFDSAATAT---SAVAC 180
           PL+ NNAAN  M++SL V+PHS  L       H HGGSAATVARF++   +    +A +C
Sbjct: 121 PLLVNNAANSTMLKSLGVKPHSFRL-------HSHGGSAATVARFENGTASIGRGTASSC 180

Query: 181 SSEDD-LMDITWPGSFRLNTQQ-MEPPMKLDLNLKL 208
           S ED+ LM ITWPGSFRLNTQQ  E  +KLDLNLKL
Sbjct: 181 SLEDESLMHITWPGSFRLNTQQKTESSIKLDLNLKL 209

BLAST of Clc02G07040 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 76.6 bits (187), Expect = 2.5e-14
Identity = 71/213 (33.33%), Postives = 97/213 (45.54%), Query Frame = 0

Query: 20  SSSTKINRNESIANENLAKGWLNLSLGGNFQPSNGIDSDSQ----PLMNNPNNSN----- 79
           SSS+++  N S   E+     LNLSL  N   +N +D +S     PL +   +SN     
Sbjct: 15  SSSSQVASNLSPVGEDYKPISLNLSLSFNNNNNNNLDLESSSLTLPLSSTSESSNPEQQQ 74

Query: 80  -------AKMFSCNFCMRKFYSSQALGGHQNAHKRERGAARR------------------ 139
                   ++FSCN+C RKFYSSQALGGHQNAHKRER  A+R                  
Sbjct: 75  QQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSN 134

Query: 140 YQFQRIMAMMGLPPLMNNAANLMV--RSLCVRPHS----LLLQRPNRESHGHGGSAATVA 193
           Y      A +   PL  +    M   R+L +R HS    + + R   E+         +A
Sbjct: 135 YAAAATAAALSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVSMTRQTPET-----LIRNIA 194

BLAST of Clc02G07040 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 68.2 bits (165), Expect = 9.1e-12
Identity = 65/190 (34.21%), Postives = 89/190 (46.84%), Query Frame = 0

Query: 14  TQKPGESSSTKINR-NESIANENLAKGWLN-LSLGGNFQPSNGIDSDSQPLMNNPNNSNA 73
           T+    S  T  +R  E+ +N++L+K   N +SL      +   D+ S     NP     
Sbjct: 2   TESDDASRETPASRGGEASSNQDLSKPESNHVSLDLKLNDTFNDDTKSTKCEANP----- 61

Query: 74  KMFSCNFCMRKFYSSQALGGHQNAHKRERGAARRYQFQRIMAMMGLPPLMNNAANLMVRS 133
           ++FSCN+C RKFYSSQALGGHQNAHKRER  A+R      M      P    ++     S
Sbjct: 62  RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYTSS-----S 121

Query: 134 LCVRPHSLLLQRPNRESHGHGGSAATVARFDSAATATSAVAC--SSEDDLMDITWPGSFR 193
           L ++ HS LL       H        V+RF       + V      +D   D  WPGSFR
Sbjct: 122 LGMQAHSGLLH------HTLSQPQPLVSRFHHQGYFGNTVPLFFDYDDGGSDFFWPGSFR 175

Query: 194 LNTQQMEPPM 200
              ++ E P+
Sbjct: 182 QVVEEAEAPV 175

BLAST of Clc02G07040 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 9.1e-12
Identity = 39/85 (45.88%), Postives = 49/85 (57.65%), Query Frame = 0

Query: 61  PLMNNPNNSNAKMFSCNFCMRKFYSSQALGGHQNAHKRERGAARRYQFQRIMAMMGLP-- 120
           P  N   ++  K+FSCN+C R FYSSQALGGHQNAHKRER  A+R Q     A  G P  
Sbjct: 91  PSFNGSTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMASAAAFGHPYG 150

Query: 121 ----PLMNNAANLMVRSLCVRPHSL 140
               P     +N   R+L ++ HS+
Sbjct: 151 FAPVPFHGQYSN---RTLGIQAHSM 172

BLAST of Clc02G07040 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 )

HSP 1 Score: 65.5 bits (158), Expect = 5.9e-11
Identity = 39/90 (43.33%), Postives = 51/90 (56.67%), Query Frame = 0

Query: 55  IDSDSQPLMNNPNNSNAKMFSCNFCMRKFYSSQALGGHQNAHKRERGAARRYQFQRIMAM 114
           ID  +  +  +  ++  K+FSCN+C R FYSSQALGGHQNAHKRER  A+R Q     A 
Sbjct: 42  IDDTTSIVNESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASAS 101

Query: 115 -----MGLPPLMNNAANLMVRSLCVRPHSL 140
                 G  PL  +      RSL ++ HS+
Sbjct: 102 AFGHPYGFSPLPFHGQYNNHRSLGIQAHSI 131

BLAST of Clc02G07040 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 63.5 bits (153), Expect = 2.2e-10
Identity = 37/76 (48.68%), Postives = 50/76 (65.79%), Query Frame = 0

Query: 43  LSLGGNFQPSNGIDSDSQPLMNNPNNSNAKMFSCNFCMRKFYSSQALGGHQNAHKRERGA 102
           L+L  +F+ S+   S  Q        ++ ++FSCN+C RKFYSSQALGGHQNAHKRER  
Sbjct: 39  LNLIDSFKTSSSSTSHHQ--HQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTL 98

Query: 103 ARRYQFQRIMAMMGLP 119
           A+R Q+ + M +  LP
Sbjct: 99  AKRGQYYK-MTLSSLP 111

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6571937.13.0e-8179.26Zinc finger protein 7, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022952416.18.6e-8178.18zinc finger protein 4-like [Cucurbita moschata] >XP_022952417.1 zinc finger prot... [more]
XP_022972416.12.5e-8077.73zinc finger protein 4-like [Cucurbita maxima] >XP_022972417.1 zinc finger protei... [more]
KAG7011625.11.2e-7979.34Zinc finger protein 7 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_023553849.14.0e-7877.63zinc finger protein 4-like [Cucurbita pepo subsp. pepo] >XP_023553850.1 zinc fin... [more]
Match NameE-valueIdentityDescription
Q392633.6e-1333.33Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2[more]
Q392661.3e-1034.21Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1[more]
Q392628.3e-1043.33Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1[more]
Q424853.1e-0948.68Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1[more]
Q9FFX45.4e-0943.84Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1GK614.2e-8178.18zinc finger protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111455111 PE=4 SV... [more]
A0A6J1I5X11.2e-8077.73zinc finger protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111470983 PE=4 SV=1[more]
A0A5A7SMP78.2e-6974.42Zinc finger protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... [more]
A0A1S3C0M28.2e-6974.42zinc finger protein 4-like OS=Cucumis melo OX=3656 GN=LOC103495286 PE=4 SV=1[more]
A0A0A0K2Z61.2e-6771.76C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G071620 P... [more]
Match NameE-valueIdentityDescription
AT1G66140.12.5e-1433.33zinc finger protein 4 [more]
AT1G24625.19.1e-1234.21zinc finger protein 7 [more]
AT5G10970.19.1e-1245.88C2H2 and C2HC zinc fingers superfamily protein [more]
AT5G25160.15.9e-1143.33zinc finger protein 3 [more]
AT1G80730.12.2e-1048.68zinc-finger protein 1 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 52..115
e-value: 7.1E-7
score: 31.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..29
NoneNo IPR availablePANTHERPTHR47593:SF8ZINC FINGER PROTEIN 4-LIKEcoord: 3..207
NoneNo IPR availablePANTHERPTHR47593ZINC FINGER PROTEIN 4-LIKEcoord: 3..207
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 76..96
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 74..101
score: 10.844938
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 71..100

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc02G07040.2Clc02G07040.2mRNA