Clc02G07030 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G07030
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Caspase-6 protein
Location	ClcChr02: 7097362 .. 7099433 (+)
RNA-Seq Expression	Clc02G07030
Synteny	Clc02G07030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAGAAACTAAAACCCTCGCAAAGCCCCAACACAACACCGATAGCATCCTCACAACAATCACAGCGTAGAATCTGAGAAGACGATGGCTTGGCGCTCTGGATCGCTCTCTCGGACGCTAATCTCCACTGTCCGCTCTTCATCTTCCCGGTTAACTTCATCGGCTCCTCAACTCCGCCCGCCGCCGCTCACTGGTCCTCGCCGCCTGCCGGGCCACCATTTCTCTGCTGCTTCCAGGTTCCCTCCCTCAAAACCCTCTAACATTACTCTGTTGTGTTGCGAAATTGAAAATGATAGCCGTTAGTGTTTTCACTTAGTGCCTAGTTGTTCCGTTACCTTTTTTCGTGGTTGATTCATACTTAACTGGATGGGAATTCTGCTTGACAACGTTTTTGCAGATTTGAAATCTCGAGAAAATTTTGTTGTTTTGTAGTTTAATTGTCTGATAAGAAATGGGAGAGAATTTATCAGAGCAAAGATATATTAGATATTTGGATGGTTCTTGATTATAGATATGTTGTCCTGCTTTCTTGCCGTTACTTGTAGAATGTAGATGAAAAGGAAGTGACCTCTTCTATTCTATTTCCTCCACTATGACCACGGAATATGTTATTGACTCAAACCAGTTGGCATATTGTTAGGGAGAGTGTGTCCTCTATATATCTCAATAATGGTATATGATATTGTCCACTTTAGACAAAATTTTCATAGTTTTGTTTTTGGTTTCACCCAAAATATCTCATACCTATAGTTGTACTCACTTATATACCCATGATTATCTCTTGTCTAGCAATGTAGAACTTCGGTCGTATTTTCACCACATGATTTTTGGATAAGAAGAAATTGGGATCAAATTCTTTGATGTAGAAAGTTATTTTTGGTAAAATTTTAAGTTTGTTACTTGAACTTTTAAGGTTGTGTCGTGCTTAAACTGTTAGTCTTGTATTTGATAGATTGCTAAACTTTAAAAAAAGTCTTATAAATTTTTTTAATTTTGAATTATGTACTTAATAGATCTTTGATCTTCCAATTTTATGCTTAATAGACTCTGAGTTATGAAACCTTTTTTACAAACCTCAATGACTCATTGACACAAAATTCAAAATTTAGAACTTTTTAAACATTATTTATAATTAGACACAACATCATTGAAGTTCCAAAACTTATTAGATTAGATACCACACTTCAAACCTATTAGACAAACCATTATGTTCTTGGCTGTATTCCATATTGACATCTTTCTTTCTTTGTCATATATGATATGCATCTTTCCAATTTATTCCTATGAAGAAAATATAGTTCCCCTATTCTCGAGGTAAAATTAATAATGGGAATTTTTGGGTCATCCGTTTGATAATATAATTTATATGTAATTCTGTGTTTCTTCTTTCGTTTACCGGTTTGTTATTTATTTCATACTCTAGGAGCTTGGGAGAACTGGGATGCGTACAATCATTTTTGCCAATTTACAGCATGACAGCGGCTTCCTGCCTGACATCCCACCTCACTGTTAATGTTAGGGCTTTTTGCGAGCTGTCTCATGGTACCTTCTGCCGTACTTGTCAAGATCGCTAGTGGTCGCTTTGTGAGTCTTGCTTGTTCTAGGACACACTATATGCACAGTATCGTAAATTTTCTCTCTCTGATTGTTATTGTTATTACTTGTCAGCGGCCTAGATCCTAGGGATGCATTTCAGTGGTTAAGATTGCACAACAATGGTTTCTATTTATGGAATGAAATGTAAAAGTAGTCAAGAACACTAAGCCTAGGTGATTAGCTTCTCCCACACTTAGCATTTGAGTTTGGTTGATAAGATCTTGAGAAGGATTTGGGATTGAACTGATGAGCGGGAGTGGGGAAGATGGACGGTGCTCAAGGACAGTCACTCATCCTGGGCTGGAGATTGATACAATATTGTACGGGTTTTTTTTGTCCTCTTGTGCTTTGGATTTTATTAATATATTGGATCCTAGTATTTTCCAACTTGTATGGAGACTGGGAACCAGGAAATCTAGTAGCTTGATCCTTGATGGCGTTTGGCAGAAAAGTTGCAGTGCTAGTGTTAATTTATAG

mRNA sequence

CGAGAAACTAAAACCCTCGCAAAGCCCCAACACAACACCGATAGCATCCTCACAACAATCACAGCGTAGAATCTGAGAAGACGATGGCTTGGCGCTCTGGATCGCTCTCTCGGACGCTAATCTCCACTGTCCGCTCTTCATCTTCCCGGTTAACTTCATCGGCTCCTCAACTCCGCCCGCCGCCGCTCACTGGTCCTCGCCGCCTGCCGGGCCACCATTTCTCTGCTGCTTCCAGGAGCTTGGGAGAACTGGGATGCGTACAATCATTTTTGCCAATTTACAGCATGACAGCGGCTTCCTGCCTGACATCCCACCTCACTGTTAATGTTAGGGCTTTTTGCGAGCTGTCTCATGGATTTGGGATTGAACTGATGAGCGGGAGTGGGGAAGATGGACGGTGCTCAAGGACAGTCACTCATCCTGGGCTGGAGATTGATACAATATTGTACGGGTTTTTTTTGTCCTCTTGTGCTTTGGATTTTATTAATATATTGGATCCTAGTATTTTCCAACTTGTATGGAGACTGGGAACCAGGAAATCTAGTAGCTTGATCCTTGATGGCGTTTGGCAGAAAAGTTGCAGTGCTAGTGTTAATTTATAG

Coding sequence (CDS)

ATGGCTTGGCGCTCTGGATCGCTCTCTCGGACGCTAATCTCCACTGTCCGCTCTTCATCTTCCCGGTTAACTTCATCGGCTCCTCAACTCCGCCCGCCGCCGCTCACTGGTCCTCGCCGCCTGCCGGGCCACCATTTCTCTGCTGCTTCCAGGAGCTTGGGAGAACTGGGATGCGTACAATCATTTTTGCCAATTTACAGCATGACAGCGGCTTCCTGCCTGACATCCCACCTCACTGTTAATGTTAGGGCTTTTTGCGAGCTGTCTCATGGATTTGGGATTGAACTGATGAGCGGGAGTGGGGAAGATGGACGGTGCTCAAGGACAGTCACTCATCCTGGGCTGGAGATTGATACAATATTGTACGGGTTTTTTTTGTCCTCTTGTGCTTTGGATTTTATTAATATATTGGATCCTAGTATTTTCCAACTTGTATGGAGACTGGGAACCAGGAAATCTAGTAGCTTGATCCTTGATGGCGTTTGGCAGAAAAGTTGCAGTGCTAGTGTTAATTTATAG

Protein sequence

MAWRSGSLSRTLISTVRSSSSRLTSSAPQLRPPPLTGPRRLPGHHFSAASRSLGELGCVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGFGIELMSGSGEDGRCSRTVTHPGLEIDTILYGFFLSSCALDFINILDPSIFQLVWRLGTRKSSSLILDGVWQKSCSASVNL

Homology

[Close]

BLAST of Clc02G07030 vs. NCBI nr
Match: XP_038888392.1 (uncharacterized protein LOC120078240 isoform X2 [Benincasa hispida])

HSP 1 Score: 167.9 bits (424), Expect = 7.5e-38
Identity = 84/91 (92.31%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 1  MAWRSGSLSRTLISTVRSSSSRLTSSAPQLRPPPLTGPRRLPGHHFSAASRSLGELGCVQ 60
          MAWRSGS+SRTL+STVRSSSSR++SS PQLRPPPLT PRRLPG HFSAASRSLGELGCVQ
Sbjct: 1  MAWRSGSVSRTLMSTVRSSSSRVSSSVPQLRPPPLTAPRRLPGRHFSAASRSLGELGCVQ 60

Query: 61 SFLPIYSMTAASCLTSHLTVNVRAFCELSHG 92
          SFLPIYSMTAASCLTSHLTVNVRAFCELSHG
Sbjct: 61 SFLPIYSMTAASCLTSHLTVNVRAFCELSHG 91

[Close]

BLAST of Clc02G07030 vs. NCBI nr
Match: XP_038888391.1 (uncharacterized protein LOC120078240 isoform X1 [Benincasa hispida])

HSP 1 Score: 167.9 bits (424), Expect = 7.5e-38
Identity = 84/91 (92.31%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 1  MAWRSGSLSRTLISTVRSSSSRLTSSAPQLRPPPLTGPRRLPGHHFSAASRSLGELGCVQ 60
          MAWRSGS+SRTL+STVRSSSSR++SS PQLRPPPLT PRRLPG HFSAASRSLGELGCVQ
Sbjct: 1  MAWRSGSVSRTLMSTVRSSSSRVSSSVPQLRPPPLTAPRRLPGRHFSAASRSLGELGCVQ 60

Query: 61 SFLPIYSMTAASCLTSHLTVNVRAFCELSHG 92
          SFLPIYSMTAASCLTSHLTVNVRAFCELSHG
Sbjct: 61 SFLPIYSMTAASCLTSHLTVNVRAFCELSHG 91

[Close]

BLAST of Clc02G07030 vs. NCBI nr
Match: XP_022148806.1 (uncharacterized protein LOC111017370 isoform X1 [Momordica charantia] >XP_022148807.1 uncharacterized protein LOC111017370 isoform X1 [Momordica charantia])

HSP 1 Score: 167.5 bits (423), Expect = 9.8e-38
Identity = 84/91 (92.31%), Postives = 87/91 (95.60%), Query Frame = 0


Query: 1  MAWRSGSLSRTLISTVRSSSSRLTSSAPQLRPPPLTGPRRLPGHHFSAASRSLGELGCVQ 60
          MAWRSGSLSRTLISTVRSSSSRLT S PQLRPPP+T PRRLPG HFSAASRSLGELGC+Q
Sbjct: 1  MAWRSGSLSRTLISTVRSSSSRLTPSVPQLRPPPVTAPRRLPGRHFSAASRSLGELGCLQ 60

Query: 61 SFLPIYSMTAASCLTSHLTVNVRAFCELSHG 92
          SFLPIYSMTAA+CLTSHLTVNVRAFCELSHG
Sbjct: 61 SFLPIYSMTAATCLTSHLTVNVRAFCELSHG 91

[Close]

BLAST of Clc02G07030 vs. NCBI nr
Match: XP_022148809.1 (uncharacterized protein LOC111017370 isoform X2 [Momordica charantia])

HSP 1 Score: 167.5 bits (423), Expect = 9.8e-38
Identity = 84/91 (92.31%), Postives = 87/91 (95.60%), Query Frame = 0


Query: 1  MAWRSGSLSRTLISTVRSSSSRLTSSAPQLRPPPLTGPRRLPGHHFSAASRSLGELGCVQ 60
          MAWRSGSLSRTLISTVRSSSSRLT S PQLRPPP+T PRRLPG HFSAASRSLGELGC+Q
Sbjct: 1  MAWRSGSLSRTLISTVRSSSSRLTPSVPQLRPPPVTAPRRLPGRHFSAASRSLGELGCLQ 60

Query: 61 SFLPIYSMTAASCLTSHLTVNVRAFCELSHG 92
          SFLPIYSMTAA+CLTSHLTVNVRAFCELSHG
Sbjct: 61 SFLPIYSMTAATCLTSHLTVNVRAFCELSHG 91

[Close]

BLAST of Clc02G07030 vs. NCBI nr
Match: XP_008455007.1 (PREDICTED: uncharacterized protein LOC103495285 isoform X1 [Cucumis melo])

HSP 1 Score: 165.6 bits (418), Expect = 3.7e-37
Identity = 86/91 (94.51%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 1  MAWRSGSLSRTLISTVRSSSSRLTSSAPQLRPPPLTGPRRLPGHHFSAASRSLGELGCVQ 60
          MAWRSGSLSRTL+STVRSSSSRL+SSAPQLR PPLT PRRLPG HFSAASRSLGELGCVQ
Sbjct: 1  MAWRSGSLSRTLVSTVRSSSSRLSSSAPQLR-PPLTAPRRLPGRHFSAASRSLGELGCVQ 60

Query: 61 SFLPIYSMTAASCLTSHLTVNVRAFCELSHG 92
          SFLPIYSMTAASCLTSHLTVNVRAFCELSHG
Sbjct: 61 SFLPIYSMTAASCLTSHLTVNVRAFCELSHG 90

[Close]

BLAST of Clc02G07030 vs. ExPASy TrEMBL
Match: A0A6J1D623 (uncharacterized protein LOC111017370 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017370 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 4.7e-38
Identity = 84/91 (92.31%), Postives = 87/91 (95.60%), Query Frame = 0


Query: 1  MAWRSGSLSRTLISTVRSSSSRLTSSAPQLRPPPLTGPRRLPGHHFSAASRSLGELGCVQ 60
          MAWRSGSLSRTLISTVRSSSSRLT S PQLRPPP+T PRRLPG HFSAASRSLGELGC+Q
Sbjct: 1  MAWRSGSLSRTLISTVRSSSSRLTPSVPQLRPPPVTAPRRLPGRHFSAASRSLGELGCLQ 60

Query: 61 SFLPIYSMTAASCLTSHLTVNVRAFCELSHG 92
          SFLPIYSMTAA+CLTSHLTVNVRAFCELSHG
Sbjct: 61 SFLPIYSMTAATCLTSHLTVNVRAFCELSHG 91

[Close]

BLAST of Clc02G07030 vs. ExPASy TrEMBL
Match: A0A6J1D533 (uncharacterized protein LOC111017370 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111017370 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 4.7e-38
Identity = 84/91 (92.31%), Postives = 87/91 (95.60%), Query Frame = 0


Query: 1  MAWRSGSLSRTLISTVRSSSSRLTSSAPQLRPPPLTGPRRLPGHHFSAASRSLGELGCVQ 60
          MAWRSGSLSRTLISTVRSSSSRLT S PQLRPPP+T PRRLPG HFSAASRSLGELGC+Q
Sbjct: 1  MAWRSGSLSRTLISTVRSSSSRLTPSVPQLRPPPVTAPRRLPGRHFSAASRSLGELGCLQ 60

Query: 61 SFLPIYSMTAASCLTSHLTVNVRAFCELSHG 92
          SFLPIYSMTAA+CLTSHLTVNVRAFCELSHG
Sbjct: 61 SFLPIYSMTAATCLTSHLTVNVRAFCELSHG 91

[Close]

BLAST of Clc02G07030 vs. ExPASy TrEMBL
Match: A0A1S3BZZ8 (uncharacterized protein LOC103495285 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495285 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.8e-37
Identity = 86/91 (94.51%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 1  MAWRSGSLSRTLISTVRSSSSRLTSSAPQLRPPPLTGPRRLPGHHFSAASRSLGELGCVQ 60
          MAWRSGSLSRTL+STVRSSSSRL+SSAPQLR PPLT PRRLPG HFSAASRSLGELGCVQ
Sbjct: 1  MAWRSGSLSRTLVSTVRSSSSRLSSSAPQLR-PPLTAPRRLPGRHFSAASRSLGELGCVQ 60

Query: 61 SFLPIYSMTAASCLTSHLTVNVRAFCELSHG 92
          SFLPIYSMTAASCLTSHLTVNVRAFCELSHG
Sbjct: 61 SFLPIYSMTAASCLTSHLTVNVRAFCELSHG 90

[Close]

BLAST of Clc02G07030 vs. ExPASy TrEMBL
Match: A0A1S3BZV8 (uncharacterized protein LOC103495285 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495285 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.8e-37
Identity = 86/91 (94.51%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 1  MAWRSGSLSRTLISTVRSSSSRLTSSAPQLRPPPLTGPRRLPGHHFSAASRSLGELGCVQ 60
          MAWRSGSLSRTL+STVRSSSSRL+SSAPQLR PPLT PRRLPG HFSAASRSLGELGCVQ
Sbjct: 1  MAWRSGSLSRTLVSTVRSSSSRLSSSAPQLR-PPLTAPRRLPGRHFSAASRSLGELGCVQ 60

Query: 61 SFLPIYSMTAASCLTSHLTVNVRAFCELSHG 92
          SFLPIYSMTAASCLTSHLTVNVRAFCELSHG
Sbjct: 61 SFLPIYSMTAASCLTSHLTVNVRAFCELSHG 90

[Close]

BLAST of Clc02G07030 vs. ExPASy TrEMBL
Match: A0A6J1EI96 (uncharacterized protein LOC111434477 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434477 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 5.2e-37
Identity = 82/91 (90.11%), Postives = 86/91 (94.51%), Query Frame = 0


Query: 1  MAWRSGSLSRTLISTVRSSSSRLTSSAPQLRPPPLTGPRRLPGHHFSAASRSLGELGCVQ 60
          MAWRSGSLSRTL+STVRSSSSRLT SAPQLRPPP+T PRRLP  HFSA SRSLGELGCVQ
Sbjct: 1  MAWRSGSLSRTLMSTVRSSSSRLTPSAPQLRPPPVTAPRRLPARHFSAPSRSLGELGCVQ 60

Query: 61 SFLPIYSMTAASCLTSHLTVNVRAFCELSHG 92
          SFLPIYS+TAASCLTSHLT+NVRAFCELSHG
Sbjct: 61 SFLPIYSVTAASCLTSHLTINVRAFCELSHG 91

[Close]

BLAST of Clc02G07030 vs. TAIR 10
Match: AT2G15000.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.1); Has 70 Blast hits to 70 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 89.7 bits (221), Expect = 2.4e-18
Identity = 55/96 (57.29%), Postives = 69/96 (71.88%), Query Frame = 0


Query: 1  MAWR-SGSLSRTLIS-TVRSSSSRL-TSSAPQLRPPPLTGPRRLPGHHFSAASRSLGELG 60
          MAWR +GS +R+ +S T RS S R  T++ P+LRPP  + P R     FS+ SR+LG LG
Sbjct: 1  MAWRNAGSAARSFVSATARSPSLRSPTTALPRLRPPQSSLPSR--RFTFSSPSRNLGALG 60

Query: 61 CVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGFG 94
          C QSFLP+YS+ A S LTSHL VN+RAFCELS+G G
Sbjct: 61 CTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNGIG 94

[Close]

BLAST of Clc02G07030 vs. TAIR 10
Match: AT2G15000.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.1); Has 70 Blast hits to 70 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 89.7 bits (221), Expect = 2.4e-18
Identity = 55/96 (57.29%), Postives = 69/96 (71.88%), Query Frame = 0


Query: 1  MAWR-SGSLSRTLIS-TVRSSSSRL-TSSAPQLRPPPLTGPRRLPGHHFSAASRSLGELG 60
          MAWR +GS +R+ +S T RS S R  T++ P+LRPP  + P R     FS+ SR+LG LG
Sbjct: 1  MAWRNAGSAARSFVSATARSPSLRSPTTALPRLRPPQSSLPSR--RFTFSSPSRNLGALG 60

Query: 61 CVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHGFG 94
          C QSFLP+YS+ A S LTSHL VN+RAFCELS+G G
Sbjct: 61 CTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNGIG 94

[Close]

BLAST of Clc02G07030 vs. TAIR 10
Match: AT2G15000.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.2); Has 70 Blast hits to 70 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 87.4 bits (215), Expect = 1.2e-17
Identity = 54/94 (57.45%), Postives = 68/94 (72.34%), Query Frame = 0


Query: 1  MAWR-SGSLSRTLIS-TVRSSSSRL-TSSAPQLRPPPLTGPRRLPGHHFSAASRSLGELG 60
          MAWR +GS +R+ +S T RS S R  T++ P+LRPP  + P R     FS+ SR+LG LG
Sbjct: 1  MAWRNAGSAARSFVSATARSPSLRSPTTALPRLRPPQSSLPSR--RFTFSSPSRNLGALG 60

Query: 61 CVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHG 92
          C QSFLP+YS+ A S LTSHL VN+RAFCELS+G
Sbjct: 61 CTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNG 92

[Close]

BLAST of Clc02G07030 vs. TAIR 10
Match: AT2G15000.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.2); Has 80 Blast hits to 80 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 87.4 bits (215), Expect = 1.2e-17
Identity = 54/94 (57.45%), Postives = 68/94 (72.34%), Query Frame = 0


Query: 1  MAWR-SGSLSRTLIS-TVRSSSSRL-TSSAPQLRPPPLTGPRRLPGHHFSAASRSLGELG 60
          MAWR +GS +R+ +S T RS S R  T++ P+LRPP  + P R     FS+ SR+LG LG
Sbjct: 1  MAWRNAGSAARSFVSATARSPSLRSPTTALPRLRPPQSSLPSR--RFTFSSPSRNLGALG 60

Query: 61 CVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHG 92
          C QSFLP+YS+ A S LTSHL VN+RAFCELS+G
Sbjct: 61 CTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNG 92

[Close]

BLAST of Clc02G07030 vs. TAIR 10
Match: AT2G15000.5 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.2); Has 80 Blast hits to 80 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 87.4 bits (215), Expect = 1.2e-17
Identity = 54/94 (57.45%), Postives = 68/94 (72.34%), Query Frame = 0


Query: 1  MAWR-SGSLSRTLIS-TVRSSSSRL-TSSAPQLRPPPLTGPRRLPGHHFSAASRSLGELG 60
          MAWR +GS +R+ +S T RS S R  T++ P+LRPP  + P R     FS+ SR+LG LG
Sbjct: 1  MAWRNAGSAARSFVSATARSPSLRSPTTALPRLRPPQSSLPSR--RFTFSSPSRNLGALG 60

Query: 61 CVQSFLPIYSMTAASCLTSHLTVNVRAFCELSHG 92
          C QSFLP+YS+ A S LTSHL VN+RAFCELS+G
Sbjct: 61 CTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNG 92

The following BLAST results are available for this feature:

BLAST of Clc02G07030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888392.1	7.5e-38	92.31	uncharacterized protein LOC120078240 isoform X2 [Benincasa hispida]	[more]
XP_038888391.1	7.5e-38	92.31	uncharacterized protein LOC120078240 isoform X1 [Benincasa hispida]	[more]
XP_022148806.1	9.8e-38	92.31	uncharacterized protein LOC111017370 isoform X1 [Momordica charantia] >XP_022148...	[more]
XP_022148809.1	9.8e-38	92.31	uncharacterized protein LOC111017370 isoform X2 [Momordica charantia]	[more]
XP_008455007.1	3.7e-37	94.51	PREDICTED: uncharacterized protein LOC103495285 isoform X1 [Cucumis melo]	[more]

BLAST of Clc02G07030 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc02G07030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D623	4.7e-38	92.31	uncharacterized protein LOC111017370 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1D533	4.7e-38	92.31	uncharacterized protein LOC111017370 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A1S3BZZ8	1.8e-37	94.51	uncharacterized protein LOC103495285 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BZV8	1.8e-37	94.51	uncharacterized protein LOC103495285 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1EI96	5.2e-37	90.11	uncharacterized protein LOC111434477 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Clc02G07030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15000.2	2.4e-18	57.29	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G15000.3	2.4e-18	57.29	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G15000.1	1.2e-17	57.45	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G15000.4	1.2e-17	57.45	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G15000.5	1.2e-17	57.45	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..41
None	No IPR available	PANTHER	PTHR33156:SF26	OS12G0592200 PROTEIN	coord: 1..93
IPR043459	NFD6/NOXY2-like	PANTHER	PTHR33156	OS02G0230000 PROTEIN	coord: 1..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G07030.2	Clc02G07030.2	mRNA