Clc02G06890 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G06890
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Heat-shock protein
Location	ClcChr02: 6961076 .. 6962477 (-)
RNA-Seq Expression	Clc02G06890
Synteny	Clc02G06890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACCCTAAAAAACATAAATTAAGAAGTATGGCGATGATGGGCTTACCTAGAAACCTGCTGTTCCTCATTCTTCCACTTGGATTCTTACTGTTTTTGTTTTTCGCTAATCAACAAGCTAACGCTCTGATGCCCTATCGCTCCGTATGGGATCTCATGCAGCCGGGTAATACAGTTTTACCTTATCATTTCTTTTTTCTAAAAAAATGTAATTGGTTTGGTCAATTAAGTATATAAATCTTATTTATAATTAAATTTCTTGTTATGTTATCTATTTTCTACCGTACTTTTCAAATATAAAGGATAATAGTTTTTAGAAATGTTTTTTTTTAAAAAAAAAGTTGGCTAACAATCCATCTATTTTACTTTAAAATAATGTAAATGTAAACCGTAATAAAAAAAATTAAGCCTACATCTAGAATTTGAGATTGTTTTCAAAATGAAAGCAAATTTTGATAATTTTTTTTTTTAAAAAAAGAGGTACTTATTTTTTTTTCTAATTGAGCAATTTAAATGATTACTTGATAAATATGCAAAGATTTTGGTTTTTAATTTTTAGCTTTTGAAACCTTTCAACATCTCTTACCACTTCTAAATCTCTTACCACTTCTAAATTATGTGCCTTATTATCTATTTTTAATAATTTTTAAAAAATTAAATCAAATTTTAAAAACTAAAAAATTGTTTTTAAAAATTTTTCTTCTACAATATTTTGGTTAAGAATACAATTCTTTTAATTTGACCTAACTTTTATAAGGGTTAAAATTGGACTATCAAACTTATGATAGTAGTAAAAATTAAGATGACAAACAATAAAAATTGAATCTAACTTATCTAAATTGATTTTACAATTTGGGTAGTTATTGCAATTTATTTAAAATAAAATTATTATGGAATGAGGGGTTAAATAATGTTTAATATCCGTCTTGTGACAGGTGGCTACACAGAGGACCCATTTCGGATCCTAGAACAGAGTCCACTAAGCGTTCCGAAATCAGCGGTGGACACGCTGGCAGTGGCACGTGCGGATTGGAAGGAGACGAATGAAGAGCACGTGATATGGATGGACATTCCAGGAGTAAAGAGGGAGGATTTGAAGATCGAGGTAGAGGAAAATCGAGTGCTGAGGATCAGTGGAGAGATGAAGGGAGAGGCTGAGGTGGAAGGGGAGAGGTGGCACCGGGCAGAGAGGATGAGTTCCTCGGGCAGGTTCTGGAGGCAATTCAGGCTGCCCGCCAATGCTGACGTGGAAAGGATTAGGGCCCACTTGGAGAATGGGGTTATAAAGGTCATTGTGCCTAAGCTTCCTCAAGAGAAGAAGAGAGAAGCCAAGGTGGTGAAGATTGAGGAAGAGGGAAAAGCGGGAGGGGAGGATCTGAAGCCTACCAAGGCTGAAATGTAA

mRNA sequence

ATGTACCCTAAAAAACATAAATTAAGAAGTATGGCGATGATGGGCTTACCTAGAAACCTGCTGTTCCTCATTCTTCCACTTGGATTCTTACTGTTTTTGTTTTTCGCTAATCAACAAGCTAACGCTCTGATGCCCTATCGCTCCGTATGGGATCTCATGCAGCCGGGTGGCTACACAGAGGACCCATTTCGGATCCTAGAACAGAGTCCACTAAGCGTTCCGAAATCAGCGGTGGACACGCTGGCAGTGGCACGTGCGGATTGGAAGGAGACGAATGAAGAGCACGTGATATGGATGGACATTCCAGGAGTAAAGAGGGAGGATTTGAAGATCGAGGTAGAGGAAAATCGAGTGCTGAGGATCAGTGGAGAGATGAAGGGAGAGGCTGAGGTGGAAGGGGAGAGGTGGCACCGGGCAGAGAGGATGAGTTCCTCGGGCAGGTTCTGGAGGCAATTCAGGCTGCCCGCCAATGCTGACGTGGAAAGGATTAGGGCCCACTTGGAGAATGGGGTTATAAAGGTCATTGTGCCTAAGCTTCCTCAAGAGAAGAAGAGAGAAGCCAAGGTGGTGAAGATTGAGGAAGAGGGAAAAGCGGGAGGGGAGGATCTGAAGCCTACCAAGGCTGAAATGTAA

Coding sequence (CDS)

ATGTACCCTAAAAAACATAAATTAAGAAGTATGGCGATGATGGGCTTACCTAGAAACCTGCTGTTCCTCATTCTTCCACTTGGATTCTTACTGTTTTTGTTTTTCGCTAATCAACAAGCTAACGCTCTGATGCCCTATCGCTCCGTATGGGATCTCATGCAGCCGGGTGGCTACACAGAGGACCCATTTCGGATCCTAGAACAGAGTCCACTAAGCGTTCCGAAATCAGCGGTGGACACGCTGGCAGTGGCACGTGCGGATTGGAAGGAGACGAATGAAGAGCACGTGATATGGATGGACATTCCAGGAGTAAAGAGGGAGGATTTGAAGATCGAGGTAGAGGAAAATCGAGTGCTGAGGATCAGTGGAGAGATGAAGGGAGAGGCTGAGGTGGAAGGGGAGAGGTGGCACCGGGCAGAGAGGATGAGTTCCTCGGGCAGGTTCTGGAGGCAATTCAGGCTGCCCGCCAATGCTGACGTGGAAAGGATTAGGGCCCACTTGGAGAATGGGGTTATAAAGGTCATTGTGCCTAAGCTTCCTCAAGAGAAGAAGAGAGAAGCCAAGGTGGTGAAGATTGAGGAAGAGGGAAAAGCGGGAGGGGAGGATCTGAAGCCTACCAAGGCTGAAATGTAA

Protein sequence

MYPKKHKLRSMAMMGLPRNLLFLILPLGFLLFLFFANQQANALMPYRSVWDLMQPGGYTEDPFRILEQSPLSVPKSAVDTLAVARADWKETNEEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAEVEGERWHRAERMSSSGRFWRQFRLPANADVERIRAHLENGVIKVIVPKLPQEKKREAKVVKIEEEGKAGGEDLKPTKAEM

Homology

[Close]

BLAST of Clc02G06890 vs. NCBI nr
Match: ADU55786.1 (HSP22.9 [Citrullus lanatus])

HSP 1 Score: 389.8 bits (1000), Expect = 1.5e-104
Identity = 198/200 (99.00%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 11  MAMMGLPRNLLFLILPLGFLLFLFFANQQANALMPYRSVWDLMQPGGYTEDPFRILEQSP 70
           MAMMGLPRNLLFLILPLGFLLFLF ANQQANALMPYRSVWDLMQPGGYTEDPFRILEQSP
Sbjct: 1   MAMMGLPRNLLFLILPLGFLLFLFVANQQANALMPYRSVWDLMQPGGYTEDPFRILEQSP 60

Query: 71  LSVPKSAVDTLAVARADWKETNEEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAE 130
           LSVPKSAVDTLAVARADWKETNEEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAE
Sbjct: 61  LSVPKSAVDTLAVARADWKETNEEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAE 120

Query: 131 VEGERWHRAERMSSSGRFWRQFRLPANADVERIRAHLENGVIKVIVPKLPQEKKREAKVV 190
           VEGERWHRAERMSSSGRFWRQFRLPANADVERIRAHLENGV+KVIVPKLPQEKKREAKVV
Sbjct: 121 VEGERWHRAERMSSSGRFWRQFRLPANADVERIRAHLENGVLKVIVPKLPQEKKREAKVV 180

Query: 191 KIEEEGKAGGEDLKPTKAEM 211
           KIEEEGKAGGEDLKPTKAEM
Sbjct: 181 KIEEEGKAGGEDLKPTKAEM 200

[Close]

BLAST of Clc02G06890 vs. NCBI nr
Match: TYK06786.1 (22.0 kDa heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 342.8 bits (878), Expect = 2.1e-90
Identity = 175/200 (87.50%), Postives = 184/200 (92.00%), Query Frame = 0


Query: 11  MAMMGLPRNLLFLILPLGFLLFLFFANQQANALMPYRSVWDLMQPGGYTEDPFRILEQSP 70
           MAMMGLPRN LFLIL L    F F A QQ NALMPYRS+WD+MQPGGY+EDPFRILEQSP
Sbjct: 1   MAMMGLPRNSLFLILGLA---FYFLAAQQVNALMPYRSIWDIMQPGGYSEDPFRILEQSP 60

Query: 71  LSVPKSAVDTLAVARADWKETNEEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAE 130
           LSVPKSAVDTLAVARADWKET +EHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAE
Sbjct: 61  LSVPKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAE 120

Query: 131 VEGERWHRAERMSSSGRFWRQFRLPANADVERIRAHLENGVIKVIVPKLPQEKKREAKVV 190
           VEGERWHRAERMSSSGRFWRQFR+P NAD+E IRAHLENGV+KVIVPKLPQEKK+EAKVV
Sbjct: 121 VEGERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVV 180

Query: 191 KIEEEGKAGGEDLKPTKAEM 211
           KIEE  K+GGEDLK TKAEM
Sbjct: 181 KIEEGAKSGGEDLKATKAEM 197

[Close]

BLAST of Clc02G06890 vs. NCBI nr
Match: XP_008454987.1 (PREDICTED: 22.0 kDa heat shock protein-like [Cucumis melo] >KAA0031333.1 22.0 kDa heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 341.3 bits (874), Expect = 6.0e-90
Identity = 174/200 (87.00%), Postives = 183/200 (91.50%), Query Frame = 0


Query: 11  MAMMGLPRNLLFLILPLGFLLFLFFANQQANALMPYRSVWDLMQPGGYTEDPFRILEQSP 70
           MAMMGLPRN LFLIL L    F F A QQ NALMPYRS+WD+MQPGGY+EDPFRILEQSP
Sbjct: 1   MAMMGLPRNSLFLILGLA---FYFLAAQQVNALMPYRSIWDIMQPGGYSEDPFRILEQSP 60

Query: 71  LSVPKSAVDTLAVARADWKETNEEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAE 130
           LSVPKSAVDTLAVARADWKET +EHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGE E
Sbjct: 61  LSVPKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEGE 120

Query: 131 VEGERWHRAERMSSSGRFWRQFRLPANADVERIRAHLENGVIKVIVPKLPQEKKREAKVV 190
           VEGERWHRAERMSSSGRFWRQFR+P NAD+E IRAHLENGV+KVIVPKLPQEKK+EAKVV
Sbjct: 121 VEGERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVV 180

Query: 191 KIEEEGKAGGEDLKPTKAEM 211
           KIEE  K+GGEDLK TKAEM
Sbjct: 181 KIEEGAKSGGEDLKATKAEM 197

[Close]

BLAST of Clc02G06890 vs. NCBI nr
Match: XP_004136960.1 (22.0 kDa heat shock protein [Cucumis sativus] >KGN43890.1 hypothetical protein Csa_017123 [Cucumis sativus])

HSP 1 Score: 340.1 bits (871), Expect = 1.3e-89
Identity = 173/200 (86.50%), Postives = 183/200 (91.50%), Query Frame = 0


Query: 11  MAMMGLPRNLLFLILPLGFLLFLFFANQQANALMPYRSVWDLMQPGGYTEDPFRILEQSP 70
           MAMMGLPRN LFLIL L    F FFA QQANALMPYRS+WD+MQPGGY+EDPFRILEQSP
Sbjct: 1   MAMMGLPRNSLFLILGLA---FYFFATQQANALMPYRSIWDIMQPGGYSEDPFRILEQSP 60

Query: 71  LSVPKSAVDTLAVARADWKETNEEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAE 130
           LSVPKSAVDTLAVARADWKET  EHVIWMDIPG+KREDLKIEVEENRVLRISGEMKGEAE
Sbjct: 61  LSVPKSAVDTLAVARADWKETETEHVIWMDIPGIKREDLKIEVEENRVLRISGEMKGEAE 120

Query: 131 VEGERWHRAERMSSSGRFWRQFRLPANADVERIRAHLENGVIKVIVPKLPQEKKREAKVV 190
           V GERWHRAERMSSSG+FWRQFRLP NAD+E I+AHLENGV+KVIVPKLPQEKK+EAKVV
Sbjct: 121 VAGERWHRAERMSSSGKFWRQFRLPGNADMEGIKAHLENGVLKVIVPKLPQEKKKEAKVV 180

Query: 191 KIEEEGKAGGEDLKPTKAEM 211
           KIEE  K+GGEDLK TKA M
Sbjct: 181 KIEEGAKSGGEDLKATKAAM 197

[Close]

BLAST of Clc02G06890 vs. NCBI nr
Match: XP_022952789.1 (22.0 kDa heat shock protein-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 296.6 bits (758), Expect = 1.7e-76
Identity = 147/197 (74.62%), Postives = 176/197 (89.34%), Query Frame = 0


Query: 14  MGLPRNLLFLILPLGFLLFLFFANQQANALMPYRSVWDLMQPGGYTEDPFRILEQSPLSV 73
           MGLPR+++ + LPL  LLF+      A+ALMPYRS+WD+MQPGG++EDPFRILEQSPL V
Sbjct: 3   MGLPRSMVCMFLPLAVLLFVTH-QHAAHALMPYRSIWDIMQPGGFSEDPFRILEQSPLGV 62

Query: 74  PKSAVDTLAVARADWKETNEEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAEVEG 133
           P+SAVDT+A+AR DWKET+ EH+IWMDIPGVK+EDLKIEVEEN VLRISGEMKGE+EVEG
Sbjct: 63  PRSAVDTVAIARTDWKETSGEHMIWMDIPGVKKEDLKIEVEENSVLRISGEMKGESEVEG 122

Query: 134 ERWHRAERMSSSGRFWRQFRLPANADVERIRAHLENGVIKVIVPKLPQEKKREAKVVKIE 193
           ERWHRAER SSSGRFWRQFRLP NA++E I+AHLENGV+KV VPKLP+EKK+EAKVVKIE
Sbjct: 123 ERWHRAER-SSSGRFWRQFRLPGNANMEGIKAHLENGVLKVTVPKLPEEKKKEAKVVKIE 182

Query: 194 EEGKAGGEDLKPTKAEM 211
           E   +GGED+KP++A++
Sbjct: 183 EGSMSGGEDVKPSRADV 197

[Close]

BLAST of Clc02G06890 vs. ExPASy Swiss-Prot
Match: P19244 (22.7 kDa class IV heat shock protein OS=Pisum sativum OX=3888 GN=HSP22.7 PE=2 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 6.4e-34
Identity = 77/148 (52.03%), Postives = 104/148 (70.27%), Query Frame = 0


Query: 61  DPFRILEQSPLSVPKSAVD-TLAVARADWKETNEEHVIWMDIPGVKREDLKIEVEENRVL 120
           DPFR+LEQ P  V K     TL+ AR DWKET E HVI +D+PG+K++D+KIEVEENRVL
Sbjct: 51  DPFRVLEQIPYGVEKHEPSITLSHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVL 110

Query: 121 RISGEMKGEAEVEGERWHRAERMSSSGRFWRQFRLPANADVERIRAHLENGVIKVIVPKL 180
           R+SGE K E + +G+ WHR ER  S G+FWRQF+LP N D++ ++A +ENGV+ + + KL
Sbjct: 111 RVSGERKKEEDKKGDHWHRVER--SYGKFWRQFKLPQNVDLDSVKAKMENGVLTLTLHKL 170

Query: 181 PQEKKREAKVVKIEEEGKAGGEDLKPTK 208
             +K +  ++V I E      ED KP+K
Sbjct: 171 SHDKIKGPRMVSIVE------EDDKPSK 190

[Close]

BLAST of Clc02G06890 vs. ExPASy Swiss-Prot
Match: P30236 (22.0 kDa class IV heat shock protein OS=Glycine max OX=3847 GN=HSP22.0 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 4.1e-33
Identity = 84/181 (46.41%), Postives = 111/181 (61.33%), Query Frame = 0


Query: 30  LLFLFFANQQAN-ALMPY--------RSVWDLMQPGGYTEDPFRILEQSPLSVPK-SAVD 89
           L FL     +AN +L+P+          +W    P     DPFR+LE  P  V K  A  
Sbjct: 8   LFFLLLCVAKANGSLLPFMDPPITLLADLWSDRFP-----DPFRVLEHIPFGVDKDEASM 67

Query: 90  TLAVARADWKETNEEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAEVEGERWHRA 149
            ++ AR DWKET E HVI +D+PG+KRE++K+EVEENRVLR+SGE K E E +G+ WHR 
Sbjct: 68  AMSPARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRV 127

Query: 150 ERMSSSGRFWRQFRLPANADVERIRAHLENGVIKVIVPKLPQEKKREAKVVKIEEEGKAG 201
           ER  S G+FWRQFRLP N D++ ++A LENGV+ + + KL   K +  +VV I  E    
Sbjct: 128 ER--SYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTLDKLSPGKIKGPRVVSIAGEDHQQ 181

[Close]

BLAST of Clc02G06890 vs. ExPASy Swiss-Prot
Match: Q38806 (22.0 kDa heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP22.0 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 5.4e-33
Identity = 72/135 (53.33%), Postives = 97/135 (71.85%), Query Frame = 0


Query: 61  DPFRILEQSPLSVPKSAVDTLAVARADWKETNEEHVIWMDIPGVKREDLKIEVEENRVLR 120
           DPF+ILE+ PL + +     L+ AR DWKET E H I +DIPG+K++++KIEVEEN VLR
Sbjct: 48  DPFKILERIPLGLERDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLR 107

Query: 121 ISGEMKGEAEVEGERWHRAERMSSSGRFWRQFRLPANADVERIRAHLENGVIKVIVPKLP 180
           +SGE K E E +G++WHR ER  S G+FWRQF+LP N D+E ++A LENGV+ + + KL 
Sbjct: 108 VSGERKREEEKKGDQWHRVER--SYGKFWRQFKLPDNVDMESVKAKLENGVLTINLTKLS 167

Query: 181 QEKKREAKVVKIEEE 196
            EK +  +VV I  E
Sbjct: 168 PEKVKGPRVVNIAAE 180

[Close]

BLAST of Clc02G06890 vs. ExPASy Swiss-Prot
Match: Q53M11 (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP21.9 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.6e-32
Identity = 86/189 (45.50%), Postives = 118/189 (62.43%), Query Frame = 0


Query: 40  ANALMPYRSVWDLMQPGGYTEDPFRILEQSPL--------SVPKSAVDTLAVARADWKET 99
           A AL+PY         G   +DPFR+LEQSPL        +        +A+AR DWKET
Sbjct: 27  AAALVPYGY-------GYMLDDPFRVLEQSPLRPAGGVAAAAAAGEPAAVALARCDWKET 86

Query: 100 NEEHVIWMDIPGVKREDLKIEVEE-NRVLRISGEMK-------GEAEVEGERWHRAERMS 159
            E HV+ +D+PGV+R D+++EV+E +RVLR+SGE +        E E +G RWHRAER  
Sbjct: 87  PEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVRWHRAER-- 146

Query: 160 SSGRFWRQFRLPANADVERIRAHLENGVIKVIVPKLPQEKKREAKVVKIEEEGKAG--GE 211
           ++GRFWR+FR+P  ADV R+ A L++GV+ V VPK+P  + RE +VV I+  G      E
Sbjct: 147 AAGRFWRRFRMPPGADVGRVAARLDDGVLTVTVPKVPGHRGREPRVVAIDGAGAGDMEAE 206

[Close]

BLAST of Clc02G06890 vs. ExPASy Swiss-Prot
Match: Q7XUW5 (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP23.2 PE=2 SV=2)

HSP 1 Score: 132.5 bits (332), Expect = 5.6e-30
Identity = 72/146 (49.32%), Postives = 97/146 (66.44%), Query Frame = 0


Query: 61  DPFRILEQSPLSVPKSAVDTLAVARADWKETNEEHVIWMDIPGVKREDLKIEVEENRVLR 120
           DPFRILE  P    +  V  L++AR DW+ET + H + +D+PG+++EDL++EVE+NRVLR
Sbjct: 53  DPFRILEHVPFGFDRDDVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLR 112

Query: 121 ISGEMKGEAEVE----GERWHRAERMSSSGRFWRQFRLPANADVERIRAHLENGVIKVIV 180
           ISGE + E   E    G+ WHR ER  S GRFWRQ RLP NAD++ I A L+NGV+ V  
Sbjct: 113 ISGERRREETTEQKGGGDHWHREER--SYGRFWRQLRLPDNADLDSIAASLDNGVLTVRF 172

Query: 181 PKLPQEKKREAKVVKIEEEGKAGGED 203
            KL  ++ +  +VV I     AGG+D
Sbjct: 173 RKLAPDQIKGPRVVGI---ASAGGDD 193

[Close]

BLAST of Clc02G06890 vs. ExPASy TrEMBL
Match: H6TB39 (HSP22.9 OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 7.2e-105
Identity = 198/200 (99.00%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 11  MAMMGLPRNLLFLILPLGFLLFLFFANQQANALMPYRSVWDLMQPGGYTEDPFRILEQSP 70
           MAMMGLPRNLLFLILPLGFLLFLF ANQQANALMPYRSVWDLMQPGGYTEDPFRILEQSP
Sbjct: 1   MAMMGLPRNLLFLILPLGFLLFLFVANQQANALMPYRSVWDLMQPGGYTEDPFRILEQSP 60

Query: 71  LSVPKSAVDTLAVARADWKETNEEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAE 130
           LSVPKSAVDTLAVARADWKETNEEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAE
Sbjct: 61  LSVPKSAVDTLAVARADWKETNEEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAE 120

Query: 131 VEGERWHRAERMSSSGRFWRQFRLPANADVERIRAHLENGVIKVIVPKLPQEKKREAKVV 190
           VEGERWHRAERMSSSGRFWRQFRLPANADVERIRAHLENGV+KVIVPKLPQEKKREAKVV
Sbjct: 121 VEGERWHRAERMSSSGRFWRQFRLPANADVERIRAHLENGVLKVIVPKLPQEKKREAKVV 180

Query: 191 KIEEEGKAGGEDLKPTKAEM 211
           KIEEEGKAGGEDLKPTKAEM
Sbjct: 181 KIEEEGKAGGEDLKPTKAEM 200

[Close]

BLAST of Clc02G06890 vs. ExPASy TrEMBL
Match: A0A5D3C8Y8 (22.0 kDa heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00880 PE=3 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 1.0e-90
Identity = 175/200 (87.50%), Postives = 184/200 (92.00%), Query Frame = 0


Query: 11  MAMMGLPRNLLFLILPLGFLLFLFFANQQANALMPYRSVWDLMQPGGYTEDPFRILEQSP 70
           MAMMGLPRN LFLIL L    F F A QQ NALMPYRS+WD+MQPGGY+EDPFRILEQSP
Sbjct: 1   MAMMGLPRNSLFLILGLA---FYFLAAQQVNALMPYRSIWDIMQPGGYSEDPFRILEQSP 60

Query: 71  LSVPKSAVDTLAVARADWKETNEEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAE 130
           LSVPKSAVDTLAVARADWKET +EHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAE
Sbjct: 61  LSVPKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAE 120

Query: 131 VEGERWHRAERMSSSGRFWRQFRLPANADVERIRAHLENGVIKVIVPKLPQEKKREAKVV 190
           VEGERWHRAERMSSSGRFWRQFR+P NAD+E IRAHLENGV+KVIVPKLPQEKK+EAKVV
Sbjct: 121 VEGERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVV 180

Query: 191 KIEEEGKAGGEDLKPTKAEM 211
           KIEE  K+GGEDLK TKAEM
Sbjct: 181 KIEEGAKSGGEDLKATKAEM 197

[Close]

BLAST of Clc02G06890 vs. ExPASy TrEMBL
Match: A0A5A7SMA0 (22.0 kDa heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G00870 PE=3 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 2.9e-90
Identity = 174/200 (87.00%), Postives = 183/200 (91.50%), Query Frame = 0


Query: 11  MAMMGLPRNLLFLILPLGFLLFLFFANQQANALMPYRSVWDLMQPGGYTEDPFRILEQSP 70
           MAMMGLPRN LFLIL L    F F A QQ NALMPYRS+WD+MQPGGY+EDPFRILEQSP
Sbjct: 1   MAMMGLPRNSLFLILGLA---FYFLAAQQVNALMPYRSIWDIMQPGGYSEDPFRILEQSP 60

Query: 71  LSVPKSAVDTLAVARADWKETNEEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAE 130
           LSVPKSAVDTLAVARADWKET +EHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGE E
Sbjct: 61  LSVPKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEGE 120

Query: 131 VEGERWHRAERMSSSGRFWRQFRLPANADVERIRAHLENGVIKVIVPKLPQEKKREAKVV 190
           VEGERWHRAERMSSSGRFWRQFR+P NAD+E IRAHLENGV+KVIVPKLPQEKK+EAKVV
Sbjct: 121 VEGERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVV 180

Query: 191 KIEEEGKAGGEDLKPTKAEM 211
           KIEE  K+GGEDLK TKAEM
Sbjct: 181 KIEEGAKSGGEDLKATKAEM 197

[Close]

BLAST of Clc02G06890 vs. ExPASy TrEMBL
Match: A0A1S3BZX9 (22.0 kDa heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103495267 PE=3 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 2.9e-90
Identity = 174/200 (87.00%), Postives = 183/200 (91.50%), Query Frame = 0


Query: 11  MAMMGLPRNLLFLILPLGFLLFLFFANQQANALMPYRSVWDLMQPGGYTEDPFRILEQSP 70
           MAMMGLPRN LFLIL L    F F A QQ NALMPYRS+WD+MQPGGY+EDPFRILEQSP
Sbjct: 1   MAMMGLPRNSLFLILGLA---FYFLAAQQVNALMPYRSIWDIMQPGGYSEDPFRILEQSP 60

Query: 71  LSVPKSAVDTLAVARADWKETNEEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAE 130
           LSVPKSAVDTLAVARADWKET +EHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGE E
Sbjct: 61  LSVPKSAVDTLAVARADWKETEKEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEGE 120

Query: 131 VEGERWHRAERMSSSGRFWRQFRLPANADVERIRAHLENGVIKVIVPKLPQEKKREAKVV 190
           VEGERWHRAERMSSSGRFWRQFR+P NAD+E IRAHLENGV+KVIVPKLPQEKK+EAKVV
Sbjct: 121 VEGERWHRAERMSSSGRFWRQFRMPGNADMEGIRAHLENGVLKVIVPKLPQEKKKEAKVV 180

Query: 191 KIEEEGKAGGEDLKPTKAEM 211
           KIEE  K+GGEDLK TKAEM
Sbjct: 181 KIEEGAKSGGEDLKATKAEM 197

[Close]

BLAST of Clc02G06890 vs. ExPASy TrEMBL
Match: A0A0A0K2J0 (Heat-shock protein OS=Cucumis sativus OX=3659 GN=Csa_7G072770 PE=3 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 6.5e-90
Identity = 173/200 (86.50%), Postives = 183/200 (91.50%), Query Frame = 0


Query: 11  MAMMGLPRNLLFLILPLGFLLFLFFANQQANALMPYRSVWDLMQPGGYTEDPFRILEQSP 70
           MAMMGLPRN LFLIL L    F FFA QQANALMPYRS+WD+MQPGGY+EDPFRILEQSP
Sbjct: 1   MAMMGLPRNSLFLILGLA---FYFFATQQANALMPYRSIWDIMQPGGYSEDPFRILEQSP 60

Query: 71  LSVPKSAVDTLAVARADWKETNEEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAE 130
           LSVPKSAVDTLAVARADWKET  EHVIWMDIPG+KREDLKIEVEENRVLRISGEMKGEAE
Sbjct: 61  LSVPKSAVDTLAVARADWKETETEHVIWMDIPGIKREDLKIEVEENRVLRISGEMKGEAE 120

Query: 131 VEGERWHRAERMSSSGRFWRQFRLPANADVERIRAHLENGVIKVIVPKLPQEKKREAKVV 190
           V GERWHRAERMSSSG+FWRQFRLP NAD+E I+AHLENGV+KVIVPKLPQEKK+EAKVV
Sbjct: 121 VAGERWHRAERMSSSGKFWRQFRLPGNADMEGIKAHLENGVLKVIVPKLPQEKKKEAKVV 180

Query: 191 KIEEEGKAGGEDLKPTKAEM 211
           KIEE  K+GGEDLK TKA M
Sbjct: 181 KIEEGAKSGGEDLKATKAAM 197

[Close]

BLAST of Clc02G06890 vs. TAIR 10
Match: AT4G10250.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 142.5 bits (358), Expect = 3.8e-34
Identity = 72/135 (53.33%), Postives = 97/135 (71.85%), Query Frame = 0


Query: 61  DPFRILEQSPLSVPKSAVDTLAVARADWKETNEEHVIWMDIPGVKREDLKIEVEENRVLR 120
           DPF+ILE+ PL + +     L+ AR DWKET E H I +DIPG+K++++KIEVEEN VLR
Sbjct: 48  DPFKILERIPLGLERDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLR 107

Query: 121 ISGEMKGEAEVEGERWHRAERMSSSGRFWRQFRLPANADVERIRAHLENGVIKVIVPKLP 180
           +SGE K E E +G++WHR ER  S G+FWRQF+LP N D+E ++A LENGV+ + + KL 
Sbjct: 108 VSGERKREEEKKGDQWHRVER--SYGKFWRQFKLPDNVDMESVKAKLENGVLTINLTKLS 167

Query: 181 QEKKREAKVVKIEEE 196
            EK +  +VV I  E
Sbjct: 168 PEKVKGPRVVNIAAE 180

[Close]

BLAST of Clc02G06890 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 122.1 bits (305), Expect = 5.4e-28
Identity = 70/161 (43.48%), Postives = 94/161 (58.39%), Query Frame = 0


Query: 34  FFANQQANALMPYR-SVWDLMQPGGYTEDPFR-ILEQSPLSVPKSAVDTLAVARADWKET 93
           FF  ++ N   P+   VW          DPF   L     + P   V     A+ DW+ET
Sbjct: 7   FFGGRRTNVFDPFSLDVW----------DPFEGFLTPGLTNAPAKDVAAFTNAKVDWRET 66

Query: 94  NEEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAEVEGERWHRAERMSSSGRFWRQ 153
            E HV   D+PG+K+E++K+EVE+  +L+ISGE   E E + + WHR ER  SSG+F R+
Sbjct: 67  PEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVER--SSGKFMRR 126

Query: 154 FRLPANADVERIRAHLENGVIKVIVPKLPQEKKREAKVVKI 193
           FRLP NA VE ++A +ENGV+ V VPK+ QE K E K V I
Sbjct: 127 FRLPENAKVEEVKASMENGVLSVTVPKV-QESKPEVKSVDI 154

[Close]

BLAST of Clc02G06890 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 121.3 bits (303), Expect = 9.1e-28
Identity = 70/161 (43.48%), Postives = 102/161 (63.35%), Query Frame = 0


Query: 35  FANQQANALMPY-RSVWDLMQPGGYTEDPFRILEQSPLSVPKSAVDTLAV--ARADWKET 94
           F  +++N   P+ + +WD  + G +T         S L+   +A D  A   AR DWKET
Sbjct: 8   FGGRRSNVFDPFSQDLWDPFE-GFFT-------PSSALANASTARDVAAFTNARVDWKET 67

Query: 95  NEEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAEVEGERWHRAERMSSSGRFWRQ 154
            E HV   D+PG+K+E++K+EVE+  VL+ISGE   E E + ++WHR ER  +SG+F R+
Sbjct: 68  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVER--ASGKFMRR 127

Query: 155 FRLPANADVERIRAHLENGVIKVIVPKLPQEKKREAKVVKI 193
           FRLP NA +E ++A +ENGV+ V+VPK P EKK + K + I
Sbjct: 128 FRLPENAKMEEVKATMENGVLTVVVPKAP-EKKPQVKSIDI 157

[Close]

BLAST of Clc02G06890 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 118.2 bits (295), Expect = 7.7e-27
Identity = 69/160 (43.12%), Postives = 100/160 (62.50%), Query Frame = 0


Query: 34  FFANQQANALMPYR-SVWDLMQPGGYTEDPFRILEQSPLSVPKSAVDTLAVARADWKETN 93
           F  N+++N   P+   VW          DPF+ L  S LS   SA+     AR DW+ET 
Sbjct: 8   FNNNRRSNIFDPFSLDVW----------DPFKELTSSSLSRENSAI---VNARVDWRETP 67

Query: 94  EEHVIWMDIPGVKREDLKIEVEENRVLRISGEMKGEAEVEGERWHRAERMSSSGRFWRQF 153
           E HV   D+PG+K+E++K+E+EE+ VL+ISGE   E E + + WHR ER  SSG+F R+F
Sbjct: 68  EAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVER--SSGQFTRRF 127

Query: 154 RLPANADVERIRAHLENGVIKVIVPKLPQEKKREAKVVKI 193
           RLP N  +++++A +ENGV+ V VPK  + KK + K ++I
Sbjct: 128 RLPENVKMDQVKAAMENGVLTVTVPK-AETKKADVKSIQI 151

[Close]

BLAST of Clc02G06890 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 117.9 bits (294), Expect = 1.0e-26
Identity = 65/134 (48.51%), Postives = 89/134 (66.42%), Query Frame = 0


Query: 61  DPFR-ILEQSPL-SVPKSAVDTLAVARADWKETNEEHVIWMDIPGVKREDLKIEVEENRV 120
           DPF   L  S L + P   V     A+ DW+ET E HV   D+PG+++E++K+EVE+  +
Sbjct: 25  DPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEAHVFKADLPGLRKEEVKVEVEDGNI 84

Query: 121 LRISGEMKGEAEVEGERWHRAERMSSSGRFWRQFRLPANADVERIRAHLENGVIKVIVPK 180
           L+ISGE   E E + ++WHR ER  SSG+F R+FRLP NA +E I+A +ENGV+ V VPK
Sbjct: 85  LQISGERSNENEEKNDKWHRVER--SSGKFTRRFRLPENAKMEEIKASMENGVLSVTVPK 144

Query: 181 LPQEKKREAKVVKI 193
           +P EKK E K + I
Sbjct: 145 VP-EKKPEVKSIDI 155

The following BLAST results are available for this feature:

BLAST of Clc02G06890 vs. NCBI nr


Match Name	E-value	Identity	Description
ADU55786.1	1.5e-104	99.00	HSP22.9 [Citrullus lanatus]	[more]
TYK06786.1	2.1e-90	87.50	22.0 kDa heat shock protein-like [Cucumis melo var. makuwa]	[more]
XP_008454987.1	6.0e-90	87.00	PREDICTED: 22.0 kDa heat shock protein-like [Cucumis melo] >KAA0031333.1 22.0 kD...	[more]
XP_004136960.1	1.3e-89	86.50	22.0 kDa heat shock protein [Cucumis sativus] >KGN43890.1 hypothetical protein C...	[more]
XP_022952789.1	1.7e-76	74.62	22.0 kDa heat shock protein-like isoform X2 [Cucurbita moschata]	[more]

BLAST of Clc02G06890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P19244	6.4e-34	52.03	22.7 kDa class IV heat shock protein OS=Pisum sativum OX=3888 GN=HSP22.7 PE=2 SV...	[more]
P30236	4.1e-33	46.41	22.0 kDa class IV heat shock protein OS=Glycine max OX=3847 GN=HSP22.0 PE=3 SV=1	[more]
Q38806	5.4e-33	53.33	22.0 kDa heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP22.0 PE=2 SV=1	[more]
Q53M11	1.6e-32	45.50	21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP21.9 ...	[more]
Q7XUW5	5.6e-30	49.32	23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP23.2 ...	[more]

BLAST of Clc02G06890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
H6TB39	7.2e-105	99.00	HSP22.9 OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
A0A5D3C8Y8	1.0e-90	87.50	22.0 kDa heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A5A7SMA0	2.9e-90	87.00	22.0 kDa heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3BZX9	2.9e-90	87.00	22.0 kDa heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103495267 PE=3 SV...	[more]
A0A0A0K2J0	6.5e-90	86.50	Heat-shock protein OS=Cucumis sativus OX=3659 GN=Csa_7G072770 PE=3 SV=1	[more]

BLAST of Clc02G06890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10250.1	3.8e-34	53.33	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	5.4e-28	43.48	heat shock protein 17.4	[more]
AT5G59720.1	9.1e-28	43.48	heat shock protein 18.2	[more]
AT2G29500.1	7.7e-27	43.13	HSP20-like chaperones superfamily protein	[more]
AT1G53540.1	1.0e-26	48.51	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 87..192 e-value: 1.5E-24 score: 86.1
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 77..195 score: 25.612413
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 43..193 e-value: 5.4E-35 score: 122.3
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 74..189
None	No IPR available	PANTHER	PTHR11527:SF271	22.0 KDA CLASS IV HEAT SHOCK PROTEIN-LIKE	coord: 29..199
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 85..178 e-value: 1.1069E-41 score: 134.355
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 29..199

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G06890.2	Clc02G06890.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding