Clc02G06275 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G06275
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	ATP synthase subunit a, chloroplastic
Location	ClcChr02: 6045828 .. 6047617 (-)
RNA-Seq Expression	Clc02G06275
Synteny	Clc02G06275

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACAATGTTGGCCATCTTTTCTTAAGCCTCAGGCTGTGTTAAAGTAATCTCCTTAAGGGACTAAGGCCTGTAAAATCAGTTGAAGATGATAAGACCTAATCCGGCTTTCCGTGCGATATCCCCTTGCTAAAGGCCTATCTCTCATCTTTCAGGCAGGTTGAATGGATCATAGAAGGTGCAAGATGTGCTTCCATTCCTTTACCTATTTTTGTGCTTTTAGCAGCTTCCGCACTTATTTACCAATCAGTGCTTGTTTAGCGGGCTTCTGTCATTCTCATTTTAATATGTTGTGTTGTAAGATGTTGTAATAAATAATGATGTAGTTGTAAGATCCTCCTCCTCCTCCCGAAGCTTGGGAATCCGTGTCGAGTACATGGAAGAGTCAGATTGAGAAAGAGAGGGTACTACGAGGGGTCAGAAGTAGCGACGAGTTAATCAAAATCAAAATATCCGTATCCGGAAGTAATCGGTGACTTTCTAGAGCGGACTGGACTGGTACTAAAGAGAAGATAATAGGATTTTGCCTCAATAGGACAGAGTGAAGCGACCCAACAAGCAACGGACTTATCACATAGGTCTGTCAAGGTATTGACCCTCTTCAGAGCCTATGGGAGAAGACTGGGTAAAAGAAGCTTTTAGCCCTTGCTTGTTCAGTGCTATTTCCCGGTCGTCCAATGGTCTTTAGTCGTTATTAAGCCTGGTATGCCTCCGCCCTGTGTCCACAATTCCAGACCTTCAATCCTCGATCATCCCCTGGGCTTAGTTCACATGTTCTTGCTTAGTTCGTATTCCGGGTATGTGGCACCAAAGGGGGCGAAAGGATGGATCACCTGCCGATCTGTGATCAAACAAAACTATACCTAAAGAATGGGATACAGATTGACCAGCACAAAAGCCATCTCTATCAATCTACGCTCATTGATGAGACGGCGACATAGAAAAGAAAGTCTACCGATTGTCCCCCCCCCCCCCCCCTTTTTTCACTTAAAAGTCAAAAAGAGAGAAAAACTTGGGAAGTTTAATAGGGTGGGATCGAGGATGGAATCGAATAGCGAATGCACTTGCAGTTAAGACAGGTCCTGCATCTCCTACCTAATGCAATTGACCGACCCGGCATCTCTTTCGTTCAATAATGCCTTCGCTTCCAGACGCTATTTACCAATAAGAATAGGAAAAAGACACTACTTGAATTGAAGAAGCTCAACCTTGAAAAAGAAAGGTGGTACTTACCCCCTCTCTTGCTAGTTTATATGGAATTTCGGGGCTAAATCCCGATACGAGAAAACTAGGCCTACTGGAAATGGCACTGAGACAGGCGCTTCTTCCGCGAGATTTATCCTTATAGAAAAAGAAAGGTCAAACCGTGATTGACGCTTAGCGTTCGACCAATCATAGACGATAAGGGATCCAATTTGGCACCAAAAACGGGAATCCCGAATGCACACCCATCTTATAGAATTTCTTTCGTCACAGCTTTGAAAGAGGGTTTACAACCAACTTTCCAATCCTTTTACCCATTAACATCTTAGAAGATTTCACAAAACCCTTATCACTTAGTTTTCGACTTTTCGGAAATATATTAGCTGATGAATTAGTAGTTGTTGTTCTTGTTTCTTTAGTACCTTTAGTAGTTCCTAAACCTGTTATGTTCCTTGGATTATTTACAAGTGGTATTCAAGCTCTGATTTTTGCAACTTTAGCTGCAGCTTATATAGGCGAATCCATGGAGGGAAGGGCTAAGCCTCATGCTAGTCTATCTTCACAGTTGAACTCCTGTACGTACTAA

mRNA sequence

ATGTCACAATGTTGGCCATCTTTTCTTAAGCCTCAGGCTGTGTTAAAGCAGGTTGAATGGATCATAGAAGGACAGAGTGAAGCGACCCAACAAGCAACGGACTTATCACATAGGTCTGTCAAGTGCTATTTCCCGGTCGTCCAATGGTCTTTAGTCGTTATTAAGCCTGGTATGCCTCCGCCCTGTGTCCACAATTCCAGACCTTCAATCCTCGATCATCCCCTGGGCTTAGTTCACATGTTCTTGCTTAGTTCGTATTCCGGGCGCTTCTTCCGCGAGATTTATCCTTATAGAAAAAGAAAGGTCAAACCCTTTGAAAGAGGGTTTACAACCAACTTTCCAATCCTTTTACCCATTAACATCTTAGAAGATTTCACAAAACCCTTATCACTTAGTTTTCGACTTTTCGGAAATATATTAGCTGATGAATTAGTAGTTGTTGTTCTTGTTTCTTTAGTACCTTTAGTAGTTCCTAAACCTGTTATGTTCCTTGGATTATTTACAAGTGGTATTCAAGCTCTGATTTTTGCAACTTTAGCTGCAGCTTATATAGGCGAATCCATGGAGGGAAGGGCTAAGCCTCATGCTAGTCTATCTTCACAGTTGAACTCCTGTACGTACTAA

Coding sequence (CDS)

ATGTCACAATGTTGGCCATCTTTTCTTAAGCCTCAGGCTGTGTTAAAGCAGGTTGAATGGATCATAGAAGGACAGAGTGAAGCGACCCAACAAGCAACGGACTTATCACATAGGTCTGTCAAGTGCTATTTCCCGGTCGTCCAATGGTCTTTAGTCGTTATTAAGCCTGGTATGCCTCCGCCCTGTGTCCACAATTCCAGACCTTCAATCCTCGATCATCCCCTGGGCTTAGTTCACATGTTCTTGCTTAGTTCGTATTCCGGGCGCTTCTTCCGCGAGATTTATCCTTATAGAAAAAGAAAGGTCAAACCCTTTGAAAGAGGGTTTACAACCAACTTTCCAATCCTTTTACCCATTAACATCTTAGAAGATTTCACAAAACCCTTATCACTTAGTTTTCGACTTTTCGGAAATATATTAGCTGATGAATTAGTAGTTGTTGTTCTTGTTTCTTTAGTACCTTTAGTAGTTCCTAAACCTGTTATGTTCCTTGGATTATTTACAAGTGGTATTCAAGCTCTGATTTTTGCAACTTTAGCTGCAGCTTATATAGGCGAATCCATGGAGGGAAGGGCTAAGCCTCATGCTAGTCTATCTTCACAGTTGAACTCCTGTACGTACTAA

Protein sequence

MSQCWPSFLKPQAVLKQVEWIIEGQSEATQQATDLSHRSVKCYFPVVQWSLVVIKPGMPPPCVHNSRPSILDHPLGLVHMFLLSSYSGRFFREIYPYRKRKVKPFERGFTTNFPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPKPVMFLGLFTSGIQALIFATLAAAYIGESMEGRAKPHASLSSQLNSCTY

Homology

[Close]

BLAST of Clc02G06275 vs. NCBI nr
Match: YP_009922972.1 (ATP synthase CF0 subunit IV [Beckmannia syzigachne] >QNC66580.1 ATP synthase CF0 subunit IV [Beckmannia syzigachne] >QTJ27082.1 ATP synthase CF0 subunit IV [Beckmannia syzigachne])

HSP 1 Score: 140.2 bits (352), Expect = 2.0e-29
Identity = 80/93 (86.02%), Postives = 84/93 (90.32%), Query Frame = 0


Query: 98  RKRKVKPFERGFTTNFPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVV 157
           RK+ +  FE+ +    PILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVV
Sbjct: 154 RKKGLSYFEK-YIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVV 213

Query: 158 PKPVMFLGLFTSGIQALIFATLAAAYIGESMEG 191
           P PVMFLGLFTSGIQALIFATLAAAYIGESMEG
Sbjct: 214 PIPVMFLGLFTSGIQALIFATLAAAYIGESMEG 245

[Close]

BLAST of Clc02G06275 vs. NCBI nr
Match: YP_009540193.1 (ATPase a subunit [Ricotia aucheri] >AYQ22196.1 ATPase a subunit [Ricotia aucheri])

HSP 1 Score: 139.0 bits (349), Expect = 4.5e-29
Identity = 77/82 (93.90%), Postives = 78/82 (95.12%), Query Frame = 0


Query: 109 FTTNFPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPKPVMFLGLFT 168
           +T   PILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVP PVMFLGLFT
Sbjct: 166 YTQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFT 225

Query: 169 SGIQALIFATLAAAYIGESMEG 191
           SGIQALIFATLAAAYIGESMEG
Sbjct: 226 SGIQALIFATLAAAYIGESMEG 247

[Close]

BLAST of Clc02G06275 vs. NCBI nr
Match: QUT08812.1 (ATP synthase CF0 subunit IV [Sinojackia microcarpa])

HSP 1 Score: 139.0 bits (349), Expect = 4.5e-29
Identity = 77/83 (92.77%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 114 PILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPKPVMFLGLFTSGIQA 173
           PILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVP PVMFLGLFTSGIQA
Sbjct: 169 PILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQA 228

Query: 174 LIFATLAAAYIGESMEGRAKPHA 197
           LIFATLAAAYIGESMEG    H+
Sbjct: 229 LIFATLAAAYIGESMEGHQCMHS 251

[Close]

BLAST of Clc02G06275 vs. NCBI nr
Match: ASD46843.1 (ATP synthase CF0 subunit IV, partial [Triticum timopheevii])

HSP 1 Score: 138.7 bits (348), Expect = 5.9e-29
Identity = 78/92 (84.78%), Postives = 84/92 (91.30%), Query Frame = 0


Query: 99  KRKVKPFERGFTTNFPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVP 158
           K+ ++ FE+ +    PILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLV+P
Sbjct: 109 KKGLRYFEK-YIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVIP 168

Query: 159 KPVMFLGLFTSGIQALIFATLAAAYIGESMEG 191
            PVMFLGLFTSGIQALIFATLAAAYIGESMEG
Sbjct: 169 IPVMFLGLFTSGIQALIFATLAAAYIGESMEG 199

[Close]

BLAST of Clc02G06275 vs. NCBI nr
Match: AEJ10108.1 (ATP synthase CF0 subunit IV [Centrolepis monogyna])

HSP 1 Score: 138.7 bits (348), Expect = 5.9e-29
Identity = 80/92 (86.96%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 99  KRKVKPFERGFTTNFPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVP 158
           KR +  FE+ +    PILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVP
Sbjct: 155 KRGLVYFEK-YIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVP 214

Query: 159 KPVMFLGLFTSGIQALIFATLAAAYIGESMEG 191
            PVMFLGLFTSGIQALIFATLAAAYIGESMEG
Sbjct: 215 IPVMFLGLFTSGIQALIFATLAAAYIGESMEG 245

[Close]

BLAST of Clc02G06275 vs. ExPASy Swiss-Prot
Match: A1EA02 (ATP synthase subunit a, chloroplastic OS=Agrostis stolonifera OX=63632 GN=atpI PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.0e-31
Identity = 79/92 (85.87%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 99  KRKVKPFERGFTTNFPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVP 158
           K+ +  FE+ +    PILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVP
Sbjct: 155 KKGLSYFEK-YIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVP 214

Query: 159 KPVMFLGLFTSGIQALIFATLAAAYIGESMEG 191
            PVMFLGLFTSGIQALIFATLAAAYIGESMEG
Sbjct: 215 IPVMFLGLFTSGIQALIFATLAAAYIGESMEG 245

[Close]

BLAST of Clc02G06275 vs. ExPASy Swiss-Prot
Match: B3TN45 (ATP synthase subunit a, chloroplastic OS=Brachypodium distachyon OX=15368 GN=atpI PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.0e-31
Identity = 79/92 (85.87%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 99  KRKVKPFERGFTTNFPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVP 158
           K+ +  FE+ +    PILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVP
Sbjct: 155 KKGLSYFEK-YIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVP 214

Query: 159 KPVMFLGLFTSGIQALIFATLAAAYIGESMEG 191
            PVMFLGLFTSGIQALIFATLAAAYIGESMEG
Sbjct: 215 IPVMFLGLFTSGIQALIFATLAAAYIGESMEG 245

[Close]

BLAST of Clc02G06275 vs. ExPASy Swiss-Prot
Match: A8Y9G4 (ATP synthase subunit a, chloroplastic OS=Lolium perenne OX=4522 GN=atpI PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.0e-31
Identity = 79/92 (85.87%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 99  KRKVKPFERGFTTNFPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVP 158
           K+ +  FE+ +    PILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVP
Sbjct: 155 KKGLSYFEK-YIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVP 214

Query: 159 KPVMFLGLFTSGIQALIFATLAAAYIGESMEG 191
            PVMFLGLFTSGIQALIFATLAAAYIGESMEG
Sbjct: 215 IPVMFLGLFTSGIQALIFATLAAAYIGESMEG 245

[Close]

BLAST of Clc02G06275 vs. ExPASy Swiss-Prot
Match: P17344 (ATP synthase subunit a, chloroplastic OS=Zea mays OX=4577 GN=atpI PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.0e-31
Identity = 79/92 (85.87%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 99  KRKVKPFERGFTTNFPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVP 158
           K+ +  FE+ +    PILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVP
Sbjct: 155 KKGLSYFEK-YIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVP 214

Query: 159 KPVMFLGLFTSGIQALIFATLAAAYIGESMEG 191
            PVMFLGLFTSGIQALIFATLAAAYIGESMEG
Sbjct: 215 IPVMFLGLFTSGIQALIFATLAAAYIGESMEG 245

[Close]

BLAST of Clc02G06275 vs. ExPASy Swiss-Prot
Match: P0C2Y5 (ATP synthase subunit a, chloroplastic OS=Oryza sativa OX=4530 GN=atpI PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.0e-31
Identity = 79/92 (85.87%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 99  KRKVKPFERGFTTNFPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVP 158
           K+ +  FE+ +    PILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVP
Sbjct: 155 KKGLSYFEK-YIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVP 214

Query: 159 KPVMFLGLFTSGIQALIFATLAAAYIGESMEG 191
            PVMFLGLFTSGIQALIFATLAAAYIGESMEG
Sbjct: 215 IPVMFLGLFTSGIQALIFATLAAAYIGESMEG 245

[Close]

BLAST of Clc02G06275 vs. ExPASy TrEMBL
Match: A0A7G6KH47 (ATP synthase CF0 subunit IV OS=Beckmannia syzigachne OX=368345 GN=atpI PE=3 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 9.7e-30
Identity = 80/93 (86.02%), Postives = 84/93 (90.32%), Query Frame = 0


Query: 98  RKRKVKPFERGFTTNFPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVV 157
           RK+ +  FE+ +    PILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVV
Sbjct: 154 RKKGLSYFEK-YIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVV 213

Query: 158 PKPVMFLGLFTSGIQALIFATLAAAYIGESMEG 191
           P PVMFLGLFTSGIQALIFATLAAAYIGESMEG
Sbjct: 214 PIPVMFLGLFTSGIQALIFATLAAAYIGESMEG 245

[Close]

BLAST of Clc02G06275 vs. ExPASy TrEMBL
Match: A0A3S7WDS6 (ATP synthase subunit a, chloroplastic OS=Ricotia aucheri OX=1822399 GN=atpI PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.2e-29
Identity = 77/82 (93.90%), Postives = 78/82 (95.12%), Query Frame = 0


Query: 109 FTTNFPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPKPVMFLGLFT 168
           +T   PILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVP PVMFLGLFT
Sbjct: 166 YTQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFT 225

Query: 169 SGIQALIFATLAAAYIGESMEG 191
           SGIQALIFATLAAAYIGESMEG
Sbjct: 226 SGIQALIFATLAAAYIGESMEG 247

[Close]

BLAST of Clc02G06275 vs. ExPASy TrEMBL
Match: A0A218M1U3 (ATP synthase subunit a, chloroplastic OS=Triticum zhukovskyi OX=77602 GN=atpI PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 2.8e-29
Identity = 78/92 (84.78%), Postives = 84/92 (91.30%), Query Frame = 0


Query: 99  KRKVKPFERGFTTNFPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVP 158
           K+ ++ FE+ +    PILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLV+P
Sbjct: 155 KKGLRYFEK-YIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVIP 214

Query: 159 KPVMFLGLFTSGIQALIFATLAAAYIGESMEG 191
            PVMFLGLFTSGIQALIFATLAAAYIGESMEG
Sbjct: 215 IPVMFLGLFTSGIQALIFATLAAAYIGESMEG 245

[Close]

BLAST of Clc02G06275 vs. ExPASy TrEMBL
Match: A0A075W0T1 (ATP synthase subunit a, chloroplastic OS=Triticum timopheevii OX=4570 GN=atpI PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 2.8e-29
Identity = 78/92 (84.78%), Postives = 84/92 (91.30%), Query Frame = 0


Query: 99  KRKVKPFERGFTTNFPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVP 158
           K+ ++ FE+ +    PILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLV+P
Sbjct: 155 KKGLRYFEK-YIKPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVIP 214

Query: 159 KPVMFLGLFTSGIQALIFATLAAAYIGESMEG 191
            PVMFLGLFTSGIQALIFATLAAAYIGESMEG
Sbjct: 215 IPVMFLGLFTSGIQALIFATLAAAYIGESMEG 245

[Close]

BLAST of Clc02G06275 vs. ExPASy TrEMBL
Match: A0A023INB5 (ATP synthase CF0 subunit IV OS=Lens culinaris OX=3864 GN=atpI PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 2.8e-29
Identity = 78/91 (85.71%), Postives = 81/91 (89.01%), Query Frame = 0


Query: 100 RKVKPFERGFTTNFPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPK 159
           +K   + R +    PILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVP 
Sbjct: 155 KKGLAYFRKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPI 214

Query: 160 PVMFLGLFTSGIQALIFATLAAAYIGESMEG 191
           PVMFLGLFTSGIQALIFATLAAAYIGESMEG
Sbjct: 215 PVMFLGLFTSGIQALIFATLAAAYIGESMEG 245

[Close]

BLAST of Clc02G06275 vs. TAIR 10
Match: ATCG00150.1 (ATPase, F0 complex, subunit A protein )

HSP 1 Score: 137.9 bits (346), Expect = 9.3e-33
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 114 PILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPKPVMFLGLFTSGIQA 173
           PILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVP PVMFLGLFTSGIQA
Sbjct: 171 PILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQA 230

Query: 174 LIFATLAAAYIGESMEG 191
           LIFATLAAAYIGESMEG
Sbjct: 231 LIFATLAAAYIGESMEG 247

The following BLAST results are available for this feature:

BLAST of Clc02G06275 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009922972.1	2.0e-29	86.02	ATP synthase CF0 subunit IV [Beckmannia syzigachne] >QNC66580.1 ATP synthase CF0...	[more]
YP_009540193.1	4.5e-29	93.90	ATPase a subunit [Ricotia aucheri] >AYQ22196.1 ATPase a subunit [Ricotia aucheri...	[more]
QUT08812.1	4.5e-29	92.77	ATP synthase CF0 subunit IV [Sinojackia microcarpa]	[more]
ASD46843.1	5.9e-29	84.78	ATP synthase CF0 subunit IV, partial [Triticum timopheevii]	[more]
AEJ10108.1	5.9e-29	86.96	ATP synthase CF0 subunit IV [Centrolepis monogyna]	[more]

BLAST of Clc02G06275 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A1EA02	1.0e-31	85.87	ATP synthase subunit a, chloroplastic OS=Agrostis stolonifera OX=63632 GN=atpI P...	[more]
B3TN45	1.0e-31	85.87	ATP synthase subunit a, chloroplastic OS=Brachypodium distachyon OX=15368 GN=atp...	[more]
A8Y9G4	1.0e-31	85.87	ATP synthase subunit a, chloroplastic OS=Lolium perenne OX=4522 GN=atpI PE=3 SV=...	[more]
P17344	1.0e-31	85.87	ATP synthase subunit a, chloroplastic OS=Zea mays OX=4577 GN=atpI PE=3 SV=1	[more]
P0C2Y5	1.0e-31	85.87	ATP synthase subunit a, chloroplastic OS=Oryza sativa OX=4530 GN=atpI PE=3 SV=1	[more]

BLAST of Clc02G06275 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7G6KH47	9.7e-30	86.02	ATP synthase CF0 subunit IV OS=Beckmannia syzigachne OX=368345 GN=atpI PE=3 SV=1	[more]
A0A3S7WDS6	2.2e-29	93.90	ATP synthase subunit a, chloroplastic OS=Ricotia aucheri OX=1822399 GN=atpI PE=3...	[more]
A0A218M1U3	2.8e-29	84.78	ATP synthase subunit a, chloroplastic OS=Triticum zhukovskyi OX=77602 GN=atpI PE...	[more]
A0A075W0T1	2.8e-29	84.78	ATP synthase subunit a, chloroplastic OS=Triticum timopheevii OX=4570 GN=atpI PE...	[more]
A0A023INB5	2.8e-29	85.71	ATP synthase CF0 subunit IV OS=Lens culinaris OX=3864 GN=atpI PE=3 SV=1	[more]

BLAST of Clc02G06275 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00150.1	9.3e-33	98.70	ATPase, F0 complex, subunit A protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000568	ATP synthase, F0 complex, subunit A	PRINTS	PR00123	ATPASEA	coord: 111..126 score: 27.31 coord: 171..186 score: 43.9 coord: 127..149 score: 43.61
IPR000568	ATP synthase, F0 complex, subunit A	PFAM	PF00119	ATP-synt_A	coord: 110..184 e-value: 2.8E-20 score: 73.1
IPR035908	ATP synthase, F0 complex, subunit A superfamily	GENE3D	1.20.120.220	ATP synthase, F0 complex, subunit A	coord: 66..190 e-value: 1.4E-24 score: 89.1
IPR035908	ATP synthase, F0 complex, subunit A superfamily	SUPERFAMILY	81336	F1F0 ATP synthase subunit A	coord: 80..185
IPR045082	ATP synthase, F0 complex, subunit A, bacterial/chloroplast	PANTHER	PTHR42823	ATP SYNTHASE SUBUNIT A, CHLOROPLASTIC	coord: 106..190
IPR023011	ATP synthase, F0 complex, subunit A, active site	PROSITE	PS00449	ATPASE_A	coord: 130..139
None	No IPR available	CDD	cd00310	ATP-synt_Fo_a_6	coord: 114..185 e-value: 6.40347E-16 score: 69.7356

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G06275.1	Clc02G06275.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism
molecular_function	GO:0015078	proton transmembrane transporter activity