Clc02G06243 (gene) Watermelon (cordophanus) v2

Overview
NameClc02G06243
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description40S ribosomal protein S7
LocationClcChr02: 5976834 .. 5978168 (-)
RNA-Seq ExpressionClc02G06243
SyntenyClc02G06243
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACATCAACAGGAAGTGCATGAGAATCTCTAGCTTCCCGTAAATTTGCTACGTCCTTCTGATAACTACGATTGGCTTTCTGCAGAATTGAGAGAAAAATTGGATTAAACACACTTTTTTTATATCCATGAGTGTCCGAGCCAACTTACACGCACCTCGACTAATCTCATAGAACAACCCGCCTGACCCTACAAAATTTGGGTGCCAAGGAAACTCGTAGGATATTAAATCCTAGGTAGGTGACCACCATGGACTGAACCCATGACCTCTTAGCCCCTTTATCAAGGTCATACCCCCCTTATTTACCACTAGGCCAACCCATGATGGTTTCATGGATTAAGCACACTATTCTTCTTGCTCATACACGATGAACATATTGAGGCCACACACTTAGAGGACTCTGCGTGAACTTAAAAATTTGGCACTTATCCCTGTTATTTAAAGTTTCAGCAACTTCAATTCTCTTCTTTACCATTGTTAAAAGTATCCATATCACAATCCCATTAAAACAAACTCCTTAAATAAGAAAGTCGCCAGAGATTGGCATACTCGTTATGTGGACAACCATGCTTAGAAAGGATCCTTTTTTGTTTTTCTGGATAAGATACTCAAAAGAATCCTTACTCTAGAAAGAAAAATCAACCGTGAGAAATTATTTATAGTAGGACATTACTATCTATTCTTACTAGGCATGTACAAGTACATCAGACTCAAGAACCCACATTATATACTCAAGACTCAAGTGTAATAATCAACATACAACAATTAGATTTTAAGAACTCCTGTTAGGGAAACTACACGAAATTAACAGGTCAAATTCAAAGCAGAAACTACATTCATCTTGCACAATTCACTAATAAGCTAACCTTTGTTAAGCTAAAGATTAAGGATTCATGTAAACAGCTTGGTTCCTTTGCAGTACTGATGCGAAGCAAGCAGATAATTTAACTTTATGTCTTTAACCAATCTCTAACTACAATAAAGTTGACATGAGAATTCATAACTTTTAGTACATTAAGGCTTACTTTAATACTTCTGAATTGAACCAAGCCCCCAAGATTTGAAAGTTAAAACAGACACATACTACTATATTTCTTTTTTGATGAAAAGATGCATACTACTATACTTAGTCATCAACAAAGATATTCTTTTGCCTGCAGAGATTGTGGGGAAACAAACCAGATACAGGGTTGACGGATCAAAAAACGAGAAGGTTTTCTTGGAACCAAAGGAGTGGAACAACACCGAGTACAAGTTGGAGAGTTTCGCTGCAGTTTGCAGGAAGCTTTGTGGCAAAGATGTTGCCTTTGAGTTCCCAGTAACTGAGGCATAA

mRNA sequence

ATGAACATCAACAGGAAGTGCATGAGAATCTCTAGCTTCCCGTACAAGTACATCAGACTCAAGAACCCACATTATATACTCAAGACTCAAGTTACTGATGCGAAGCAAGCAGATAATTTAACTTTATTCATCAACAAAGATATTCTTTTGCCTGCAGAGATTGTGGGGAAACAAACCAGATACAGGGTTGACGGATCAAAAAACGAGAAGGTTTTCTTGGAACCAAAGGAGTGGAACAACACCGAGTACAAGTTGGAGAGTTTCGCTGCAGTTTGCAGGAAGCTTTGTGGCAAAGATGTTGCCTTTGAGTTCCCAGTAACTGAGGCATAA

Coding sequence (CDS)

ATGAACATCAACAGGAAGTGCATGAGAATCTCTAGCTTCCCGTACAAGTACATCAGACTCAAGAACCCACATTATATACTCAAGACTCAAGTTACTGATGCGAAGCAAGCAGATAATTTAACTTTATTCATCAACAAAGATATTCTTTTGCCTGCAGAGATTGTGGGGAAACAAACCAGATACAGGGTTGACGGATCAAAAAACGAGAAGGTTTTCTTGGAACCAAAGGAGTGGAACAACACCGAGTACAAGTTGGAGAGTTTCGCTGCAGTTTGCAGGAAGCTTTGTGGCAAAGATGTTGCCTTTGAGTTCCCAGTAACTGAGGCATAA

Protein sequence

MNINRKCMRISSFPYKYIRLKNPHYILKTQVTDAKQADNLTLFINKDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFPVTEA
Homology
[Close]
BLAST of Clc02G06243 vs. NCBI nr
Match: XP_022924227.1 (40S ribosomal protein S7-like [Cucurbita moschata] >XP_022924228.1 40S ribosomal protein S7-like [Cucurbita moschata] >XP_023001195.1 40S ribosomal protein S7-like [Cucurbita maxima] >XP_023519010.1 40S ribosomal protein S7-like [Cucurbita pepo subsp. pepo] >XP_023519011.1 40S ribosomal protein S7-like [Cucurbita pepo subsp. pepo] >KAG7019942.1 40S ribosomal protein S7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 110.9 bits (276), Expect = 6.9e-21
Identity = 54/64 (84.38%), Postives = 59/64 (92.19%), Query Frame = 0 

Query: 46  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFP 105
           +DI+LPAEIVGK+TRYRVDGSK  KVFL+PKE NNTEYKLESFAAV RKL GKDVAFEFP
Sbjct: 128 EDIVLPAEIVGKRTRYRVDGSKIMKVFLDPKEQNNTEYKLESFAAVYRKLSGKDVAFEFP 187

Query: 106 VTEA 110
           +TEA
Sbjct: 188 ITEA 191

[Close]
BLAST of Clc02G06243 vs. NCBI nr
Match: KAG6584357.1 (40S ribosomal protein S7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 110.9 bits (276), Expect = 6.9e-21
Identity = 54/64 (84.38%), Postives = 59/64 (92.19%), Query Frame = 0 

Query: 46  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFP 105
           +DI+LPAEIVGK+TRYRVDGSK  KVFL+PKE NNTEYKLESFAAV RKL GKDVAFEFP
Sbjct: 420 EDIVLPAEIVGKRTRYRVDGSKIMKVFLDPKEQNNTEYKLESFAAVYRKLSGKDVAFEFP 479

Query: 106 VTEA 110
           +TEA
Sbjct: 480 ITEA 483

[Close]
BLAST of Clc02G06243 vs. NCBI nr
Match: XP_008458552.1 (PREDICTED: 40S ribosomal protein S7 [Cucumis melo] >XP_008458626.1 PREDICTED: 40S ribosomal protein S7 [Cucumis melo] >XP_038893522.1 40S ribosomal protein S7-like [Benincasa hispida] >TYJ98994.1 40S ribosomal protein S7 [Cucumis melo var. makuwa])

HSP 1 Score: 110.5 bits (275), Expect = 9.0e-21
Identity = 54/64 (84.38%), Postives = 59/64 (92.19%), Query Frame = 0 

Query: 46  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFP 105
           +DI+LPAEIVGK+TRYRVDGSK  KVFL+PKE NNTEYKLESFAAV RKL GKDVAFEFP
Sbjct: 128 EDIVLPAEIVGKRTRYRVDGSKIMKVFLDPKERNNTEYKLESFAAVYRKLSGKDVAFEFP 187

Query: 106 VTEA 110
           +TEA
Sbjct: 188 ITEA 191

[Close]
BLAST of Clc02G06243 vs. NCBI nr
Match: XP_004137478.1 (40S ribosomal protein S7 [Cucumis sativus] >KGN64124.1 hypothetical protein Csa_014367 [Cucumis sativus])

HSP 1 Score: 110.5 bits (275), Expect = 9.0e-21
Identity = 54/64 (84.38%), Postives = 59/64 (92.19%), Query Frame = 0 

Query: 46  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFP 105
           +DI+LPAEIVGK+TRYRVDGSK  KVFL+PKE NNTEYKLESFAAV RKL GKDVAFEFP
Sbjct: 128 EDIVLPAEIVGKRTRYRVDGSKIMKVFLDPKERNNTEYKLESFAAVYRKLSGKDVAFEFP 187

Query: 106 VTEA 110
           +TEA
Sbjct: 188 ITEA 191

[Close]
BLAST of Clc02G06243 vs. NCBI nr
Match: XP_021598517.1 (40S ribosomal protein S7-like [Manihot esculenta] >OAY24423.1 hypothetical protein MANES_17G014900v8 [Manihot esculenta])

HSP 1 Score: 107.8 bits (268), Expect = 5.8e-20
Identity = 52/64 (81.25%), Postives = 58/64 (90.62%), Query Frame = 0 

Query: 46  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFP 105
           +DI+LPAEIVGK+TRYR+DGSK  KVFL+PKE NNTEYKLE+FAAV RKL GKDV FEFP
Sbjct: 128 EDIVLPAEIVGKRTRYRIDGSKIMKVFLDPKERNNTEYKLETFAAVYRKLSGKDVVFEFP 187

Query: 106 VTEA 110
           VTEA
Sbjct: 188 VTEA 191

[Close]
BLAST of Clc02G06243 vs. ExPASy Swiss-Prot
Match: Q9C514 (40S ribosomal protein S7-1 OS=Arabidopsis thaliana OX=3702 GN=RPS7A PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.2e-21
Identity = 52/81 (64.20%), Postives = 64/81 (79.01%), Query Frame = 0 

Query: 34  AKQADNLTL-----FINKDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESF 93
           AK+  N TL      I  D++LPAEIVGK+TRYR+DG+K  KVFL+PKE NNTEYK+E+F
Sbjct: 111 AKRPRNRTLTSVHEAILDDVVLPAEIVGKRTRYRLDGTKIMKVFLDPKERNNTEYKVEAF 170

Query: 94  AAVCRKLCGKDVAFEFPVTEA 110
           +AV +KL GKDV FEFP+TEA
Sbjct: 171 SAVYKKLTGKDVVFEFPITEA 191

[Close]
BLAST of Clc02G06243 vs. ExPASy Swiss-Prot
Match: Q949H0 (40S ribosomal protein S7 OS=Hordeum vulgare OX=4513 GN=RPS7 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.3e-19
Identity = 43/65 (66.15%), Postives = 56/65 (86.15%), Query Frame = 0 

Query: 44  INKDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFE 103
           I +D++ PAEIVGK+ RYR+DG+K  K++L+PKE NNTEYKLE+F+AV R+LCGKDV FE
Sbjct: 125 ILEDVVYPAEIVGKRVRYRLDGAKVIKIYLDPKERNNTEYKLETFSAVYRRLCGKDVVFE 184

Query: 104 FPVTE 109
           +PV E
Sbjct: 185 YPVAE 189

[Close]
BLAST of Clc02G06243 vs. ExPASy Swiss-Prot
Match: Q9XET4 (40S ribosomal protein S7 OS=Secale cereale OX=4550 GN=RPS7 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.1e-18
Identity = 41/63 (65.08%), Postives = 53/63 (84.13%), Query Frame = 0 

Query: 46  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFP 105
           +D++ PAEIVGK+ RYR+DGSK  K+FL+P E NNTEYKL++F AV R+LCGKDV +E+P
Sbjct: 128 EDVVYPAEIVGKRVRYRLDGSKIIKIFLDPMERNNTEYKLDTFTAVYRRLCGKDVVYEYP 187

Query: 106 VTE 109
           V E
Sbjct: 188 VAE 190

[Close]
BLAST of Clc02G06243 vs. ExPASy Swiss-Prot
Match: Q8LJU5 (40S ribosomal protein S7 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS7 PE=2 SV=2)

HSP 1 Score: 93.2 bits (230), Expect = 1.9e-18
Identity = 40/65 (61.54%), Postives = 55/65 (84.62%), Query Frame = 0 

Query: 44  INKDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFE 103
           I +D++ PAEIVGK+ RY +DG K  K+FL+PKE NNTEYKL++F++V R+LCGKDV F+
Sbjct: 126 ILEDVVYPAEIVGKRVRYHLDGRKIMKIFLDPKERNNTEYKLDTFSSVYRRLCGKDVVFD 185

Query: 104 FPVTE 109
           +P+TE
Sbjct: 186 YPMTE 190

[Close]
BLAST of Clc02G06243 vs. ExPASy Swiss-Prot
Match: Q9XH45 (40S ribosomal protein S7 OS=Brassica oleracea OX=3712 GN=RPS7 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.5e-18
Identity = 43/63 (68.25%), Postives = 51/63 (80.95%), Query Frame = 0 

Query: 46  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFP 105
           +D+  PAEIVGK+TRYRVDG+K  KV+LEPKE NNTEYKLE+   V RKL GKDV FE+P
Sbjct: 128 EDVAYPAEIVGKRTRYRVDGTKIMKVYLEPKERNNTEYKLETMVGVYRKLTGKDVVFEYP 187

Query: 106 VTE 109
           V +
Sbjct: 188 VAD 190

[Close]
BLAST of Clc02G06243 vs. ExPASy TrEMBL
Match: A0A6J1E8B6 (40S ribosomal protein S7 OS=Cucurbita moschata OX=3662 GN=LOC111431738 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.3e-21
Identity = 54/64 (84.38%), Postives = 59/64 (92.19%), Query Frame = 0 

Query: 46  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFP 105
           +DI+LPAEIVGK+TRYRVDGSK  KVFL+PKE NNTEYKLESFAAV RKL GKDVAFEFP
Sbjct: 128 EDIVLPAEIVGKRTRYRVDGSKIMKVFLDPKEQNNTEYKLESFAAVYRKLSGKDVAFEFP 187

Query: 106 VTEA 110
           +TEA
Sbjct: 188 ITEA 191

[Close]
BLAST of Clc02G06243 vs. ExPASy TrEMBL
Match: A0A6J1KKI9 (40S ribosomal protein S7 OS=Cucurbita maxima OX=3661 GN=LOC111495404 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.3e-21
Identity = 54/64 (84.38%), Postives = 59/64 (92.19%), Query Frame = 0 

Query: 46  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFP 105
           +DI+LPAEIVGK+TRYRVDGSK  KVFL+PKE NNTEYKLESFAAV RKL GKDVAFEFP
Sbjct: 128 EDIVLPAEIVGKRTRYRVDGSKIMKVFLDPKEQNNTEYKLESFAAVYRKLSGKDVAFEFP 187

Query: 106 VTEA 110
           +TEA
Sbjct: 188 ITEA 191

[Close]
BLAST of Clc02G06243 vs. ExPASy TrEMBL
Match: A0A1S3C8E2 (40S ribosomal protein S7 OS=Cucumis melo OX=3656 GN=LOC103497898 PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 4.4e-21
Identity = 54/64 (84.38%), Postives = 59/64 (92.19%), Query Frame = 0 

Query: 46  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFP 105
           +DI+LPAEIVGK+TRYRVDGSK  KVFL+PKE NNTEYKLESFAAV RKL GKDVAFEFP
Sbjct: 128 EDIVLPAEIVGKRTRYRVDGSKIMKVFLDPKERNNTEYKLESFAAVYRKLSGKDVAFEFP 187

Query: 106 VTEA 110
           +TEA
Sbjct: 188 ITEA 191

[Close]
BLAST of Clc02G06243 vs. ExPASy TrEMBL
Match: A0A5D3BIV5 (40S ribosomal protein S7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001980 PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 4.4e-21
Identity = 54/64 (84.38%), Postives = 59/64 (92.19%), Query Frame = 0 

Query: 46  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFP 105
           +DI+LPAEIVGK+TRYRVDGSK  KVFL+PKE NNTEYKLESFAAV RKL GKDVAFEFP
Sbjct: 128 EDIVLPAEIVGKRTRYRVDGSKIMKVFLDPKERNNTEYKLESFAAVYRKLSGKDVAFEFP 187

Query: 106 VTEA 110
           +TEA
Sbjct: 188 ITEA 191

[Close]
BLAST of Clc02G06243 vs. ExPASy TrEMBL
Match: A0A0A0LSZ7 (40S ribosomal protein S7 OS=Cucumis sativus OX=3659 GN=Csa_1G042360 PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 4.4e-21
Identity = 54/64 (84.38%), Postives = 59/64 (92.19%), Query Frame = 0 

Query: 46  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFP 105
           +DI+LPAEIVGK+TRYRVDGSK  KVFL+PKE NNTEYKLESFAAV RKL GKDVAFEFP
Sbjct: 128 EDIVLPAEIVGKRTRYRVDGSKIMKVFLDPKERNNTEYKLESFAAVYRKLSGKDVAFEFP 187

Query: 106 VTEA 110
           +TEA
Sbjct: 188 ITEA 191

[Close]
BLAST of Clc02G06243 vs. TAIR 10
Match: AT1G48830.1 (Ribosomal protein S7e family protein )

HSP 1 Score: 102.4 bits (254), Expect = 2.3e-22
Identity = 52/81 (64.20%), Postives = 64/81 (79.01%), Query Frame = 0 

Query: 34  AKQADNLTL-----FINKDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESF 93
           AK+  N TL      I  D++LPAEIVGK+TRYR+DG+K  KVFL+PKE NNTEYK+E+F
Sbjct: 111 AKRPRNRTLTSVHEAILDDVVLPAEIVGKRTRYRLDGTKIMKVFLDPKERNNTEYKVEAF 170

Query: 94  AAVCRKLCGKDVAFEFPVTEA 110
           +AV +KL GKDV FEFP+TEA
Sbjct: 171 SAVYKKLTGKDVVFEFPITEA 191

[Close]
BLAST of Clc02G06243 vs. TAIR 10
Match: AT1G48830.2 (Ribosomal protein S7e family protein )

HSP 1 Score: 102.4 bits (254), Expect = 2.3e-22
Identity = 52/81 (64.20%), Postives = 64/81 (79.01%), Query Frame = 0 

Query: 34  AKQADNLTL-----FINKDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESF 93
           AK+  N TL      I  D++LPAEIVGK+TRYR+DG+K  KVFL+PKE NNTEYK+E+F
Sbjct: 111 AKRPRNRTLTSVHEAILDDVVLPAEIVGKRTRYRLDGTKIMKVFLDPKERNNTEYKVEAF 170

Query: 94  AAVCRKLCGKDVAFEFPVTEA 110
           +AV +KL GKDV FEFP+TEA
Sbjct: 171 SAVYKKLTGKDVVFEFPITEA 191

[Close]
BLAST of Clc02G06243 vs. TAIR 10
Match: AT5G16130.1 (Ribosomal protein S7e family protein )

HSP 1 Score: 89.0 bits (219), Expect = 2.6e-18
Identity = 42/61 (68.85%), Postives = 49/61 (80.33%), Query Frame = 0 

Query: 46  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFP 105
           +D+  PAEIVGK+TRYR+DGSK  KVFL+ KE NNTEYKLE+   V RKL GKDV FE+P
Sbjct: 128 EDVAFPAEIVGKRTRYRLDGSKIMKVFLDAKEKNNTEYKLETMVGVYRKLTGKDVVFEYP 187

Query: 106 V 107
           V
Sbjct: 188 V 188

[Close]
BLAST of Clc02G06243 vs. TAIR 10
Match: AT3G02560.1 (Ribosomal protein S7e family protein )

HSP 1 Score: 85.9 bits (211), Expect = 2.2e-17
Identity = 41/64 (64.06%), Postives = 50/64 (78.12%), Query Frame = 0 

Query: 46  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFP 105
           +D+  PAEIVGK+TRYR+DG+K  KVFL+ K  N+TEYKLE+   V RKL GKDV FE+P
Sbjct: 128 EDVAYPAEIVGKRTRYRLDGTKIMKVFLDSKLKNDTEYKLETMVGVYRKLTGKDVVFEYP 187

Query: 106 VTEA 110
           V EA
Sbjct: 188 VIEA 191

[Close]
BLAST of Clc02G06243 vs. TAIR 10
Match: AT3G02560.2 (Ribosomal protein S7e family protein )

HSP 1 Score: 85.9 bits (211), Expect = 2.2e-17
Identity = 41/64 (64.06%), Postives = 50/64 (78.12%), Query Frame = 0 

Query: 46  KDILLPAEIVGKQTRYRVDGSKNEKVFLEPKEWNNTEYKLESFAAVCRKLCGKDVAFEFP 105
           +D+  PAEIVGK+TRYR+DG+K  KVFL+ K  N+TEYKLE+   V RKL GKDV FE+P
Sbjct: 128 EDVAYPAEIVGKRTRYRLDGTKIMKVFLDSKLKNDTEYKLETMVGVYRKLTGKDVVFEYP 187

Query: 106 VTEA 110
           V EA
Sbjct: 188 VIEA 191

The following BLAST results are available for this feature:
BLAST of Clc02G06243 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022924227.16.9e-2184.3840S ribosomal protein S7-like [Cucurbita moschata] >XP_022924228.1 40S ribosomal... [more]
KAG6584357.16.9e-2184.3840S ribosomal protein S7, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_008458552.19.0e-2184.38PREDICTED: 40S ribosomal protein S7 [Cucumis melo] >XP_008458626.1 PREDICTED: 40... [more]
XP_004137478.19.0e-2184.3840S ribosomal protein S7 [Cucumis sativus] >KGN64124.1 hypothetical protein Csa_... [more]
XP_021598517.15.8e-2081.2540S ribosomal protein S7-like [Manihot esculenta] >OAY24423.1 hypothetical prote... [more]
BLAST of Clc02G06243 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9C5143.2e-2164.2040S ribosomal protein S7-1 OS=Arabidopsis thaliana OX=3702 GN=RPS7A PE=2 SV=1[more]
Q949H01.3e-1966.1540S ribosomal protein S7 OS=Hordeum vulgare OX=4513 GN=RPS7 PE=2 SV=1[more]
Q9XET41.1e-1865.0840S ribosomal protein S7 OS=Secale cereale OX=4550 GN=RPS7 PE=2 SV=1[more]
Q8LJU51.9e-1861.5440S ribosomal protein S7 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS7 PE=2 S... [more]
Q9XH452.5e-1868.2540S ribosomal protein S7 OS=Brassica oleracea OX=3712 GN=RPS7 PE=2 SV=1[more]
BLAST of Clc02G06243 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1E8B63.3e-2184.3840S ribosomal protein S7 OS=Cucurbita moschata OX=3662 GN=LOC111431738 PE=3 SV=1[more]
A0A6J1KKI93.3e-2184.3840S ribosomal protein S7 OS=Cucurbita maxima OX=3661 GN=LOC111495404 PE=3 SV=1[more]
A0A1S3C8E24.4e-2184.3840S ribosomal protein S7 OS=Cucumis melo OX=3656 GN=LOC103497898 PE=3 SV=1[more]
A0A5D3BIV54.4e-2184.3840S ribosomal protein S7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A0A0LSZ74.4e-2184.3840S ribosomal protein S7 OS=Cucumis sativus OX=3659 GN=Csa_1G042360 PE=3 SV=1[more]
BLAST of Clc02G06243 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G48830.12.3e-2264.20Ribosomal protein S7e family protein [more]
AT1G48830.22.3e-2264.20Ribosomal protein S7e family protein [more]
AT5G16130.12.6e-1868.85Ribosomal protein S7e family protein [more]
AT3G02560.12.2e-1764.06Ribosomal protein S7e family protein [more]
AT3G02560.22.2e-1764.06Ribosomal protein S7e family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000554Ribosomal protein S7ePFAMPF01251Ribosomal_S7ecoord: 45..105
e-value: 2.2E-21
score: 76.5
IPR000554Ribosomal protein S7ePANTHERPTHR1127840S RIBOSOMAL PROTEIN S7coord: 44..109
NoneNo IPR availablePANTHERPTHR11278:SF1940S RIBOSOMAL PROTEIN S7coord: 44..109

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc02G06243.1Clc02G06243.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042274 ribosomal small subunit biogenesis
biological_process GO:0006364 rRNA processing
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0032040 small-subunit processome
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome