Clc02G04890 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G04890
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	auxin-induced protein 15A-like
Location	ClcChr02: 4193439 .. 4196088 (+)
RNA-Seq Expression	Clc02G04890
Synteny	Clc02G04890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACTTGATTCAGGTGAGGCTAATACTCATAAATCTACCACAATTTTAAGTGGGATCAATGTAGGGTTGTTCACCAAGTATATGGAGATGAGATTGGACACCTTCCCATGAGAACCATGTTAGTCATGATAAGTCAAGAAAACAGAACTATGAGCTATCCATAAATGACTCTAATATACTTCTACGATTTTTCCTTAAGTTTTATTTGGAAGTGGGGTCCCTTTTAGGATGTCCATTCTAGAGTGGTTGTGGAAAATTTGTATACCAACATGTACAGTCGCAATCGCTACCAAGTCGCTATTAATCAGTTTGAGAACACACCCATGTGATGATTCTGGACATGTGTTTCTACTGTTCATCCAACAATGGCACCCACATTAGCTTAGCCACATTTTGCAAACTCTTCACAATTGACTGGACATCTATATACACATATATCATCCATGGAAGGAAATCTTCTTTTTCGAAGTTTCAATCTTCTTATAGAAGTATTCAAGATCAAGAGAGACAAATACCAATATCAGACTACCTCATGTCATGCAGATTCTTCATTCTTCATTGAGTCCTCGAAATGCTACTGAGTCTTCTTCATTATCGAAATGTTCCAAAAGGGTATATTCCAGTGATCAGTCTATGTTGGAGAGACACAAAAGAAGCAACATGAAATACCAATATCTTACTTGAATGAGCCAGAATTGCATGAGTTGCTCAGCCATGCTGAGGAAGACTTTGAATTCGATGATCCCATGGGAGGCCCTACAATTCTCTGCAGAGAAAATGTATTTACCGCACTAGCCTCTCGCTTATCAGAGAGAACTAAAATCTGTGGCACATTTCCTTCCTTCTTGATGGGAATTGAGTGATATTGAAAATGCCTATTCCACCTTTGGAAGATACACCCAGAAGGTGATTCCAAATCTGTTCACTCCTCTAGGTAAAAAAGCTATTAGGCAAATGGCTCCTGAGGCTGCTTCCAAGACCAAGTGTTATTCTCAAGCTTGGGAAAGAGCTCTCAAGTGCTATATAGTTCCCACAAAAGCCTGCAAGTAAATGTCTTATCTCATACTGATCAGTGCATGAAAGAAGTAGAATATTCATAATTGAAAGGCACAACAGTTATTGAAACCCCTTACATATGAACTGTTCAAAGCATTCATTGAATGAGAATGAAAGTTGTTAGTTTCTAGTGCTAACAAAATGGATCTATTCATTCTTCTTTTTCTCCTAATTTGTTTTCACTATTTTTCTCTTTTGTTGATCCCACAAAAATATCTTGCTGCCATATGTTTAAGATCCTGCTTGAGATTCGTGAAAAAAGGATCAAGGAGTATCATAAACAAATAAGCACATTCTCCATTTTATATGAATATACATACTTGTAATGACTCATTGAAGCAATACAAGCCAAAAGCTTTTGTTCAAACAGAATAAAAATATATCCCTGTGAATTCCATTAAGAACAAGTACTTCTTGTTTGGGTAGATGACTAAAGCATCTTCCTTCTACAATAACTCCTTCCCATGTTGTGCTCTCCAAAGAGCAACTCTTCTCAAAAGGATATGTTTCTTTTACTTCAAAATGGGGTTGGTATTTCAACGAGAAATCATTAAACAATTTGTATGAATGTTGATTTGTATAAACAGTTGGACGACAAGATTCCCTTGTGGCATAAAGGTTTTTATTATTTATTCTATTGGTTGCACAAAAATGTATAACAGTCTGTATCAACAAACTCAAAACTCAAAATCTTAAGTTGATAGTTTATGGCATATTTTTTAATACATTCTTAACATTAATAATCCAATGTTGGTTTGTAACTCATTGGGGAGGGTTTAATATTTTTTACAGTTCTTGGCAAACAGTTAACACTAACAACCAACAAATTTTATTAGCTGGAATCTTCCCCATTGAAGTAAAATGTTATAGACAAAGCTATTAAATGCAACTAAAATTTTGTTACACCAGAAGAACAACAAGGGCTTGAATGCCTCTGATATGTCCATTATCCTATTAAAATTTTGGAGATTTTTTTAACTCACTTTCCAGTTGTTATTTGGAGACAAAAGTAGGCCATGATGTTTCTGCATAAGCTATATAGAATGACCATATATCACATGTATTTGAAATTGTCATAGTGGGTAGGAAGAAACACCCATGTGATAAGTCATAAGCCAATGTCTCTTTAGCATTGAATCTCATCTTCCTTCCTTATCTCTATTTTTCATTAACCTAAGCCTCTCATCTATATAAAGGTTATGCCATTTGGGTTCACAGCCAACAAGAGTCTTTCCATATTCCAATTCTCAAAAGAAATTTTCGAGTTCTTTTTTGGAGCATATTTGTAACATGGGTTTCCGTTTGCTAGAATTGTTACTGCTAAGCCAAGCCTTCAGCGATCTTCATCAACAGGGAATGGAGCATCTCCAAAGGCTATCAATGTACCAAAGGGATACTTTACAGTTTATGTTGGTGAGGTACAAAAGAAGCGTTTTGTCATCCCACTATCATACTTGAACCAGCCGTCTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATAATCATCCAATGGGTGCCATCACAATTCCTTGCAGTGAAAACTATTTCCTTGATCTCACTCGGAGTTGGAATGATTCATGA

mRNA sequence

ATGCACTTGATTCAGGATGTCCATTCTAGAGTGGTTGTGGAAAATTTGTATACCAACATGTACAGTCGCAATCGCTACCAAGTCGCTATTAATCAACTACCTCATGTCATGCAGATTCTTCATTCTTCATTGAGTCCTCGAAATGCTACTGAGTCTTCTTCATTATCGAAATGTTCCAAAAGGAATTGCATGAGTTGCTCAGCCATGCTGAGGAAGACTTTGAATTCGATGATCCCATGGGAGGCCCTACAATTCTCTGCAGAGAAAATTTGTTATTTGGAGACAAAATGGGTAGGAAGAAACACCCATGTGATAAGTCATAAGCCAATAATTGTTACTGCTAAGCCAAGCCTTCAGCGATCTTCATCAACAGGGAATGGAGCATCTCCAAAGGCTATCAATGTACCAAAGGGATACTTTACAGTTTATGTTGGTGAGGTACAAAAGAAGCGTTTTGTCATCCCACTATCATACTTGAACCAGCCGTCTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATAATCATCCAATGGGTGCCATCACAATTCCTTGCAGTGAAAACTATTTCCTTGATCTCACTCGGAGTTGGAATGATTCATGA

Coding sequence (CDS)

ATGCACTTGATTCAGGATGTCCATTCTAGAGTGGTTGTGGAAAATTTGTATACCAACATGTACAGTCGCAATCGCTACCAAGTCGCTATTAATCAACTACCTCATGTCATGCAGATTCTTCATTCTTCATTGAGTCCTCGAAATGCTACTGAGTCTTCTTCATTATCGAAATGTTCCAAAAGGAATTGCATGAGTTGCTCAGCCATGCTGAGGAAGACTTTGAATTCGATGATCCCATGGGAGGCCCTACAATTCTCTGCAGAGAAAATTTGTTATTTGGAGACAAAATGGGTAGGAAGAAACACCCATGTGATAAGTCATAAGCCAATAATTGTTACTGCTAAGCCAAGCCTTCAGCGATCTTCATCAACAGGGAATGGAGCATCTCCAAAGGCTATCAATGTACCAAAGGGATACTTTACAGTTTATGTTGGTGAGGTACAAAAGAAGCGTTTTGTCATCCCACTATCATACTTGAACCAGCCGTCTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATAATCATCCAATGGGTGCCATCACAATTCCTTGCAGTGAAAACTATTTCCTTGATCTCACTCGGAGTTGGAATGATTCATGA

Protein sequence

MHLIQDVHSRVVVENLYTNMYSRNRYQVAINQLPHVMQILHSSLSPRNATESSSLSKCSKRNCMSCSAMLRKTLNSMIPWEALQFSAEKICYLETKWVGRNTHVISHKPIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS

Homology

[Close]

BLAST of Clc02G04890 vs. NCBI nr
Match: XP_038887255.1 (auxin-induced protein X10A-like [Benincasa hispida])

HSP 1 Score: 175.3 bits (443), Expect = 5.5e-40
Identity = 84/97 (86.60%), Postives = 89/97 (91.75%), Query Frame = 0


Query: 107 HKPIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQD 166
           H P IVTAK SLQRSSSTGNGASPKA++VPKGYF VYVG VQKKRFVIPL+YLNQPSFQD
Sbjct: 4   HLPRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFAVYVGGVQKKRFVIPLAYLNQPSFQD 63

Query: 167 LLSQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS 204
           LL QAEEEFGYNHPMG ITIPC+E+YFLDLTRS NDS
Sbjct: 64  LLCQAEEEFGYNHPMGGITIPCNEDYFLDLTRSLNDS 100

[Close]

BLAST of Clc02G04890 vs. NCBI nr
Match: XP_011658575.1 (auxin-induced protein 15A [Cucumis sativus] >XP_011658577.2 auxin-induced protein 15A [Cucumis sativus])

HSP 1 Score: 174.9 bits (442), Expect = 7.2e-40
Identity = 84/95 (88.42%), Postives = 88/95 (92.63%), Query Frame = 0


Query: 109 PIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLL 168
           P IVTAK SLQRSSSTGNGASPKA++VPKGYF VY+GE QKKRFVIPLSYLNQPSFQDLL
Sbjct: 6   PRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFAVYIGEEQKKRFVIPLSYLNQPSFQDLL 65

Query: 169 SQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS 204
           SQAEEEFGYNHPMG ITIPC+E YFLDLTRS NDS
Sbjct: 66  SQAEEEFGYNHPMGGITIPCNEAYFLDLTRSLNDS 100

[Close]

BLAST of Clc02G04890 vs. NCBI nr
Match: XP_038887900.1 (auxin-induced protein X10A-like [Benincasa hispida])

HSP 1 Score: 174.1 bits (440), Expect = 1.2e-39
Identity = 85/95 (89.47%), Postives = 88/95 (92.63%), Query Frame = 0


Query: 109 PIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLL 168
           P IVTAK SLQRSSSTGNGASPKA++VPKGYFTVYVGE QKKRFVIPLSYLNQPSFQDLL
Sbjct: 45  PRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQPSFQDLL 104

Query: 169 SQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS 204
           SQAEEEFGYNHPMG ITIPC E+ FLDLTRS NDS
Sbjct: 105 SQAEEEFGYNHPMGGITIPCREDEFLDLTRSLNDS 139

[Close]

BLAST of Clc02G04890 vs. NCBI nr
Match: XP_022952257.1 (auxin-induced protein 15A-like [Cucurbita moschata])

HSP 1 Score: 173.7 bits (439), Expect = 1.6e-39
Identity = 84/95 (88.42%), Postives = 88/95 (92.63%), Query Frame = 0


Query: 109 PIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLL 168
           P IV+ K SLQRSSSTGNGASPKA++VPKGYFTVYVGE QKKRFVIPLSYLNQPSFQDLL
Sbjct: 6   PRIVSTKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPSFQDLL 65

Query: 169 SQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS 204
           SQAEEEFGYNHPMG ITIPCSE+ FLDLTRS NDS
Sbjct: 66  SQAEEEFGYNHPMGGITIPCSEDNFLDLTRSLNDS 100

[Close]

BLAST of Clc02G04890 vs. NCBI nr
Match: XP_038887256.1 (auxin-induced protein X10A-like [Benincasa hispida])

HSP 1 Score: 173.7 bits (439), Expect = 1.6e-39
Identity = 84/95 (88.42%), Postives = 88/95 (92.63%), Query Frame = 0


Query: 109 PIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLL 168
           P I+TAK SLQRSSSTGNGASPKA++VPKGYFTVYVG VQKKRF I LSYLNQPSFQDLL
Sbjct: 6   PRIITAKKSLQRSSSTGNGASPKAVDVPKGYFTVYVGGVQKKRFFIQLSYLNQPSFQDLL 65

Query: 169 SQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS 204
           SQAEEEFGYNHPMG ITIPCSE+YFLDLTRS NDS
Sbjct: 66  SQAEEEFGYNHPMGGITIPCSEDYFLDLTRSLNDS 100

[Close]

BLAST of Clc02G04890 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.3e-25
Identity = 53/87 (60.92%), Postives = 69/87 (79.31%), Query Frame = 0


Query: 116 PSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEF 175
           P ++++S   N AS K++ VPKGY  VYVG+ + +RF+IP+SYLNQPSFQDLL+QAEEEF
Sbjct: 6   PGIRKTSIAANQASSKSVEVPKGYLVVYVGD-KMRRFLIPVSYLNQPSFQDLLNQAEEEF 65

Query: 176 GYNHPMGAITIPCSENYFLDLTRSWND 203
           GY+HPMG +TIPC E+ FL +T   ND
Sbjct: 66  GYDHPMGGLTIPCKEDEFLTVTSHLND 91

[Close]

BLAST of Clc02G04890 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 5.8e-24
Identity = 53/86 (61.63%), Postives = 68/86 (79.07%), Query Frame = 0


Query: 116 PSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEF 175
           P ++++S + N AS KA++V KGY  VYVGE + +RFVIP+SYLN+PSFQDLLSQAEEEF
Sbjct: 6   PGIRKASFSANQASSKAVDVEKGYLAVYVGE-KMRRFVIPVSYLNKPSFQDLLSQAEEEF 65

Query: 176 GYNHPMGAITIPCSENYFLDLTRSWN 202
           GY+HP G +TIPCSE+ F  +T   N
Sbjct: 66  GYHHPNGGLTIPCSEDVFQHITSFLN 90

[Close]

BLAST of Clc02G04890 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.7e-23
Identity = 52/82 (63.41%), Postives = 64/82 (78.05%), Query Frame = 0


Query: 116 PSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEF 175
           P ++++ S  N AS K ++ PKGY  VYVGE   KRFVIP+S+LNQP FQDLLSQAEEEF
Sbjct: 6   PGIRKTLSARNEASSKVLDAPKGYLAVYVGE-NMKRFVIPVSHLNQPLFQDLLSQAEEEF 65

Query: 176 GYNHPMGAITIPCSENYFLDLT 198
           GY+HPMG +TIPCSE+ F  +T
Sbjct: 66  GYDHPMGGLTIPCSEDLFQHIT 86

[Close]

BLAST of Clc02G04890 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.4e-22
Identity = 51/71 (71.83%), Postives = 58/71 (81.69%), Query Frame = 0


Query: 131 KAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYNHPMGAITIPCSE 190
           KA + PKGY  VYVGE + KRFVIP+SYLNQPSFQDLLSQAEEEFGY+HPMG +TIPCSE
Sbjct: 13  KAADAPKGYLAVYVGE-KLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSE 72

Query: 191 NYFLDLTRSWN 202
           + F  +T   N
Sbjct: 73  DVFQCITSCLN 82

[Close]

BLAST of Clc02G04890 vs. ExPASy Swiss-Prot
Match: P33079 (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 5.4e-22
Identity = 49/85 (57.65%), Postives = 66/85 (77.65%), Query Frame = 0


Query: 118 LQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGY 177
           ++R+S     A+ K ++VPKGY  VYVG+ + +RF IP+SYLN+PSFQ+LLSQAEEEFGY
Sbjct: 9   VRRTSFYTTQAASKRVDVPKGYAAVYVGD-KMRRFTIPVSYLNEPSFQELLSQAEEEFGY 68

Query: 178 NHPMGAITIPCSENYFLDLTRSWND 203
           +HPMG +TIPC E  FL++T   N+
Sbjct: 69  DHPMGGLTIPCKEEEFLNVTAHLNE 92

[Close]

BLAST of Clc02G04890 vs. ExPASy TrEMBL
Match: A0A0A0K4J0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008980 PE=3 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 3.5e-40
Identity = 84/95 (88.42%), Postives = 88/95 (92.63%), Query Frame = 0


Query: 109 PIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLL 168
           P IVTAK SLQRSSSTGNGASPKA++VPKGYF VY+GE QKKRFVIPLSYLNQPSFQDLL
Sbjct: 6   PRIVTAKQSLQRSSSTGNGASPKAVDVPKGYFAVYIGEEQKKRFVIPLSYLNQPSFQDLL 65

Query: 169 SQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS 204
           SQAEEEFGYNHPMG ITIPC+E YFLDLTRS NDS
Sbjct: 66  SQAEEEFGYNHPMGGITIPCNEAYFLDLTRSLNDS 100

[Close]

BLAST of Clc02G04890 vs. ExPASy TrEMBL
Match: A0A6J1GJW5 (auxin-induced protein 15A-like OS=Cucurbita moschata OX=3662 GN=LOC111454987 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 7.8e-40
Identity = 84/95 (88.42%), Postives = 88/95 (92.63%), Query Frame = 0


Query: 109 PIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLL 168
           P IV+ K SLQRSSSTGNGASPKA++VPKGYFTVYVGE QKKRFVIPLSYLNQPSFQDLL
Sbjct: 6   PRIVSTKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPSFQDLL 65

Query: 169 SQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS 204
           SQAEEEFGYNHPMG ITIPCSE+ FLDLTRS NDS
Sbjct: 66  SQAEEEFGYNHPMGGITIPCSEDNFLDLTRSLNDS 100

[Close]

BLAST of Clc02G04890 vs. ExPASy TrEMBL
Match: A0A6J1GL91 (auxin-induced protein X10A-like OS=Cucurbita moschata OX=3662 GN=LOC111454985 PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.0e-39
Identity = 84/95 (88.42%), Postives = 88/95 (92.63%), Query Frame = 0


Query: 109 PIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLL 168
           P IV+ K SLQRSSSTGNGASPKA++VPKGYFTVYVGE QKKRFVIPLSYLNQPSFQDLL
Sbjct: 6   PRIVSTKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPSFQDLL 65

Query: 169 SQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS 204
           SQAEEEFGYNHPMG ITIPCSE+ FLDLTRS NDS
Sbjct: 66  SQAEEEFGYNHPMGGITIPCSEDDFLDLTRSLNDS 100

[Close]

BLAST of Clc02G04890 vs. ExPASy TrEMBL
Match: A0A5A7U7Y6 (Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001220 PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 5.1e-39
Identity = 82/95 (86.32%), Postives = 87/95 (91.58%), Query Frame = 0


Query: 109 PIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLL 168
           P IVTAK SLQRSSSTGNGASPKAI+VPKGYF VY+GE QKKRFVIPLSYLNQPSFQDLL
Sbjct: 6   PRIVTAKQSLQRSSSTGNGASPKAIDVPKGYFAVYIGEEQKKRFVIPLSYLNQPSFQDLL 65

Query: 169 SQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS 204
           SQAEE+FGYNHPMG ITIPCSE+YFLD+T   NDS
Sbjct: 66  SQAEEKFGYNHPMGGITIPCSEDYFLDVTERLNDS 100

[Close]

BLAST of Clc02G04890 vs. ExPASy TrEMBL
Match: A0A6J1HWI6 (auxin-induced protein X10A-like OS=Cucurbita maxima OX=3661 GN=LOC111468493 PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 5.1e-39
Identity = 83/95 (87.37%), Postives = 87/95 (91.58%), Query Frame = 0


Query: 109 PIIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLL 168
           P IV+ K SLQRSSSTGNGASPKA++VPKGYFTVYVGE QKKRFVIPLSYLNQPSFQDLL
Sbjct: 6   PRIVSTKQSLQRSSSTGNGASPKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPSFQDLL 65

Query: 169 SQAEEEFGYNHPMGAITIPCSENYFLDLTRSWNDS 204
           SQAEEEFGYNHPMG ITIPCSE  FLDLTR+ NDS
Sbjct: 66  SQAEEEFGYNHPMGGITIPCSEYDFLDLTRNLNDS 100

[Close]

BLAST of Clc02G04890 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 113.6 bits (283), Expect = 1.8e-25
Identity = 49/92 (53.26%), Postives = 70/92 (76.09%), Query Frame = 0


Query: 110 IIVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLS 169
           ++ ++K  L+++    + +S  +++VPKGY  VYVGE   KRFV+P+SYL+QPSFQDLL 
Sbjct: 8   VLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQPSFQDLLR 67

Query: 170 QAEEEFGYNHPMGAITIPCSENYFLDLTRSWN 202
           +AEEEFG++HPMG +TIPCSE  F+DL   +N
Sbjct: 68  KAEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]

BLAST of Clc02G04890 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-22
Identity = 48/87 (55.17%), Postives = 66/87 (75.86%), Query Frame = 0


Query: 111 IVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQ 170
           ++ AK  L RS+  G+ A       PKG+  VYVGE QKKR+++P+SYLNQPSFQ LLS+
Sbjct: 7   LLGAKKILSRSTGAGSAA-------PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSK 66

Query: 171 AEEEFGYNHPMGAITIPCSENYFLDLT 198
           +EEEFG++HPMG +TIPC E+ F+++T
Sbjct: 67  SEEEFGFDHPMGGLTIPCPEDTFINVT 86

[Close]

BLAST of Clc02G04890 vs. TAIR 10
Match: AT5G18010.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 102.8 bits (255), Expect = 3.3e-22
Identity = 48/87 (55.17%), Postives = 66/87 (75.86%), Query Frame = 0


Query: 111 IVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQ 170
           ++ AK  L RS++ G+ A       PKG+  VYVGE QKKR+++PLSYL+QPSFQ LLS+
Sbjct: 7   LLGAKKILSRSTAAGSAA-------PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSK 66

Query: 171 AEEEFGYNHPMGAITIPCSENYFLDLT 198
           +EEEFG+ HPMG +TIPC E+ F+++T
Sbjct: 67  SEEEFGFAHPMGGLTIPCPEDTFINVT 86

[Close]

BLAST of Clc02G04890 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 102.8 bits (255), Expect = 3.3e-22
Identity = 47/87 (54.02%), Postives = 66/87 (75.86%), Query Frame = 0


Query: 111 IVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQ 170
           ++ AK  L RS++  + A       PKG+  VYVGE QKKR+++P+SYLNQPSFQ LLS+
Sbjct: 7   LLGAKKILSRSTTAASAA-------PKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSK 66

Query: 171 AEEEFGYNHPMGAITIPCSENYFLDLT 198
           +EEEFG++HPMG +TIPC E+ F+++T
Sbjct: 67  SEEEFGFDHPMGGLTIPCPEDTFINVT 86

[Close]

BLAST of Clc02G04890 vs. TAIR 10
Match: AT5G18050.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 101.3 bits (251), Expect = 9.5e-22
Identity = 47/87 (54.02%), Postives = 66/87 (75.86%), Query Frame = 0


Query: 111 IVTAKPSLQRSSSTGNGASPKAINVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQ 170
           ++ AK  L RS++  + A       PKG+  VYVGE QKKR+++PLSYLNQPSFQ LLS+
Sbjct: 7   LLGAKKILSRSTAAVSAA-------PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSK 66

Query: 171 AEEEFGYNHPMGAITIPCSENYFLDLT 198
           +E+EFG++HPMG +TIPC E+ F+++T
Sbjct: 67  SEDEFGFDHPMGGLTIPCHEDTFINVT 86

The following BLAST results are available for this feature:

BLAST of Clc02G04890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887255.1	5.5e-40	86.60	auxin-induced protein X10A-like [Benincasa hispida]	[more]
XP_011658575.1	7.2e-40	88.42	auxin-induced protein 15A [Cucumis sativus] >XP_011658577.2 auxin-induced protei...	[more]
XP_038887900.1	1.2e-39	89.47	auxin-induced protein X10A-like [Benincasa hispida]	[more]
XP_022952257.1	1.6e-39	88.42	auxin-induced protein 15A-like [Cucurbita moschata]	[more]
XP_038887256.1	1.6e-39	88.42	auxin-induced protein X10A-like [Benincasa hispida]	[more]

BLAST of Clc02G04890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P33080	2.3e-25	60.92	Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33083	5.8e-24	61.63	Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1	[more]
P32295	1.7e-23	63.41	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ...	[more]
P33081	2.4e-22	71.83	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33079	5.4e-22	57.65	Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of Clc02G04890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4J0	3.5e-40	88.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008980 PE=3 SV=1	[more]
A0A6J1GJW5	7.8e-40	88.42	auxin-induced protein 15A-like OS=Cucurbita moschata OX=3662 GN=LOC111454987 PE=...	[more]
A0A6J1GL91	1.0e-39	88.42	auxin-induced protein X10A-like OS=Cucurbita moschata OX=3662 GN=LOC111454985 PE...	[more]
A0A5A7U7Y6	5.1e-39	86.32	Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1HWI6	5.1e-39	87.37	auxin-induced protein X10A-like OS=Cucurbita maxima OX=3661 GN=LOC111468493 PE=3...	[more]

BLAST of Clc02G04890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38840.1	1.8e-25	53.26	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	1.1e-22	55.17	SAUR-like auxin-responsive protein family	[more]
AT5G18010.1	3.3e-22	55.17	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	3.3e-22	54.02	SAUR-like auxin-responsive protein family	[more]
AT5G18050.1	9.5e-22	54.02	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 123..197 e-value: 3.9E-23 score: 81.4
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 114..199
None	No IPR available	PANTHER	PTHR31929:SF69	SUBFAMILY NOT NAMED	coord: 114..199

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G04890.2	Clc02G04890.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin