Clc02G04780 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G04780
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Auxin responsive SAUR protein
Location	ClcChr02: 4148744 .. 4151614 (-)
RNA-Seq Expression	Clc02G04780
Synteny	Clc02G04780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAAGTGGTAGGTCACCAATTTGCTGCATTATCGTACAGAATGCCAATCAATATGAAGATAATGACTCAGAAGACAAAGCCATGTGGCTTCCTTCCAAAGCTTTCATCTTCACTCACTAAAACTAGTTAATTTCTTTGATGTATAATATATTTCTTGCTTCCCCCACCTTATCACTGCAAACTATGAAGCACAGACATAGATACAAATATATGATATGAATATGATAAGATATGGCAAGAAAGATACGTTTCTTTAAAAAACAAAAAATAAAAATGTAGGATATAAGTAAATTTAACATAAAGATATTAAATGTAATCCAAATCCACCAAAAATAAAATCAAGTGAATGACAATAGTACAAAATTCAATACAAAAGGCAACACTAGAGATATTAAAGTACAATAGTCAAGAATGCAATAGAAAAGGTTGGTGATGCACTAGACTGATAAGAGAAGAAGATTGAAGGGAGACGTATGAAGATAAACGAAGAACTTCTTCGTTGACTTGTTGAAGATATTCAAGTGGGTTATATTTTGCAGGACTTTGTGGAGACTCAAACGTGAAGATGAAGATTAGATAATTCTAGAGTTTGGTCTTTTATTTTTATTTTTATTTTTTTCTTTTAGTTTTAAATTGGGGCAGTGAGCTTTTTAAATAAGCTACTTAGTTTTAGGTTGGAAAAGTTTAGATGAATTACTCATCTTTTTTCGTTTCTTTTTTTTAAAGTCCAGTGTACACACATATCCGATATTAAAAAAAGAAACAAATACACCAAATTGCGTGTCAAATACGTATCTGGGAGTATCGGTATCTAATACAGATTCTTTTCCTCAAATGAAGTATTTGGCATCATAGACCGCAAAAACCTTCTTGTTCAATGGATCTTTTTCACCTCTAATACTAATCCTTCAGCATCAAACTACCATTAGTCTAGCAAATCAGATTGTCATTTGATTTATAAAATGGAATTAGGGTTAATCATTGTCAACCGGGACCTTGGTTATCCAAAAGTTATAGTCTACTTTTCTTGGAATCGACTCGTGGACTTAGTGTCTGGCCTTCTCTAACATCATGTATTTCATTTTCTTCCAACTTTTTGAGGTGGAAAGTAGACAGCCGTTGGGATGATGTATTTAGGGATAAGATTTGATAACCACAAAGAATATTCAAATGGATTTGCTAATCCTATAGTAAGATTCTCATTTTCTCAATCATGAACTGCCTAACCAAACCAACAGAGAATTGAAGCTCGCAATCCCTCCCTAATCCCAACCGACTTCAATCCATCCAGTAGAAATTTAGATCATGATATTGGACTTCACAGATTCAAATGGACTAAGCATCCATTCCAGTACTTGACACTGTAAGGTCATACGGAACTTGTAAATGCCTTAATAATTAGAAGTTATGAGTTGGAGCTAATAGATTATACTTCAAAAAGTTCTAAAAGTTTGCGTGGAGAGATAGCGATGCCATTGAATAGGCAACCTGGTTGAATTGGACATTGTCCTATCTCTAAAAAATGTTAGTTAAGAAGATATTTTAGCACTTAGTTCGTCGTAATTTCCACTTTGCTTCTGATAAATCCACGTAATGTGTACTCCGCTCAAAAAAATCCACAAAGCACCAGAGACGCGTGGACACCAGCATTTATTATATGTCCTGGAAGCATAAATTCTTGATGAAGTATATGAAAATTCATTACCAAAGCATTTAGTAGCTGAGTTCACAGTGTTGCAAAAAGGGAAGGGCCATTAAATTGATTGAAAGAACAAAATTTCACACTGAAGCGTCAAACACTAGCAAAAAGGTTTGATATATAATAATGAGTACTGAACTATTCATGACTCTTCATGGAGATACTGTCTGCAGATGCATAATTTAGTTGAAAGCAAGAAGAAAATTAACAAGTTGAGTCACTGTTTTCTTCAAACTGAGGGACCCTTAAGTCAACCAAATGAACCCACAGAGGCTGGTTGGCTAGTTGGCAAAGGGGATAAAGAAGAAAAACAAAAACAAACCCAAAAAAGCAAGCAACTAAAGAAGCAGTCCAAGTTCAGTGCTTAAGCAAGTAATCTAAAAATGGAACTTAAATATTTTCTTTAATTGAAAACATACTACATGTTGCTAAGAACATGCCCAGCATCAATTAATTTAGTGCTTTATTTGATTAGAGACTCAAGGTTTCACAAGTTGTCCTTCCTTTTTCTTTTTCTTTTTTTTTTTTCTATTTTTCCTAAACACATACACATTTGTGCAAGCAAATGGTGGGGCATAATGTTTTGCACTAAACAAGGCAAACCATGTGAGATATTGCCAATTTCTTCACCTGCTATGTTTCCCCCCCCCCCCCCCCCCCCCCTTCTCATTACTTTTCTACTTATCCATAATTGACAAAAATTCTACATATATATGTGTGTGTGTATATATAAACACACCCACAAACAACACTCACTCACTCACTCAAACCACATAAACAAGTACACCACATCAGGTCCTATCAAATCCAGTTCAAAAGGCAATTCAAAAACAGGGGATCGTTCTTGTTCTAAAGCATACAGAGATGGGAATCCATTTGACAGGAATAGCAAATGCAAAGCAAAAGTTACAGAGAACTTTTTCGGCGAAATACGGGATTGGATCGGCGGTTACGAATGTTCCTAAAGGCCATTTTGCAGTGTACGTAGGAGAAACACAGAAGAAAAGGTTTGTAATTCCAATATGGTACCTGAATCATCCATTGTTTAAGGATTTGCTGAACCTTGCGGAAGAAGAATTTGGATTCGATCATCCAATGGGTGGCCTCACGATTCCTTGCAGCGAAGATTACTTCATCAGCTTAACTTCAGCTCTAAATTGTTCATAA

mRNA sequence

ATGAAGAAAGTCCTATCAAATCCAGTTCAAAAGGCAATTCAAAAACAGGGGATCGTTCTTGTTCTAAAGCATACAGAGATGGGAATCCATTTGACAGGAATAGCAAATGCAAAGCAAAAGTTACAGAGAACTTTTTCGGCGAAATACGGGATTGGATCGGCGGTTACGAATGTTCCTAAAGGCCATTTTGCAGTGTACGTAGGAGAAACACAGAAGAAAAGGTTTGTAATTCCAATATGGTACCTGAATCATCCATTGTTTAAGGATTTGCTGAACCTTGCGGAAGAAGAATTTGGATTCGATCATCCAATGGGTGGCCTCACGATTCCTTGCAGCGAAGATTACTTCATCAGCTTAACTTCAGCTCTAAATTGTTCATAA

Coding sequence (CDS)

ATGAAGAAAGTCCTATCAAATCCAGTTCAAAAGGCAATTCAAAAACAGGGGATCGTTCTTGTTCTAAAGCATACAGAGATGGGAATCCATTTGACAGGAATAGCAAATGCAAAGCAAAAGTTACAGAGAACTTTTTCGGCGAAATACGGGATTGGATCGGCGGTTACGAATGTTCCTAAAGGCCATTTTGCAGTGTACGTAGGAGAAACACAGAAGAAAAGGTTTGTAATTCCAATATGGTACCTGAATCATCCATTGTTTAAGGATTTGCTGAACCTTGCGGAAGAAGAATTTGGATTCGATCATCCAATGGGTGGCCTCACGATTCCTTGCAGCGAAGATTACTTCATCAGCTTAACTTCAGCTCTAAATTGTTCATAA

Protein sequence

MKKVLSNPVQKAIQKQGIVLVLKHTEMGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALNCS

Homology

[Close]

BLAST of Clc02G04780 vs. NCBI nr
Match: KAG6572092.1 (Indole-3-acetic acid-induced protein ARG7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 208.4 bits (529), Expect = 3.7e-50
Identity = 103/123 (83.74%), Postives = 106/123 (86.18%), Query Frame = 0


Query: 4   VLSNPVQKAIQKQGIVLVLKHTEMGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHF 63
           VL     K   K G +L    TEMGIHLTGIANAKQKLQRT S KYGIGSAVTNVPKGHF
Sbjct: 54  VLDTVSSKGSSKTGPLLSSNPTEMGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHF 113

Query: 64  AVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSAL 123
           AVYVGET+KKRFVIPI YLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTS+L
Sbjct: 114 AVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSL 173

Query: 124 NCS 127
           NCS
Sbjct: 174 NCS 176

[Close]

BLAST of Clc02G04780 vs. NCBI nr
Match: XP_038887902.1 (auxin-induced protein 15A-like [Benincasa hispida])

HSP 1 Score: 207.6 bits (527), Expect = 6.2e-50
Identity = 100/102 (98.04%), Postives = 100/102 (98.04%), Query Frame = 0


Query: 27  MGIHLTGIANAKQKLQRTFSAKYGIGSAV--TNVPKGHFAVYVGETQKKRFVIPIWYLNH 86
           MGIHLTGIANAKQKLQRTFSAKYGIGSAV  TNVPKGHFAVYVGETQKKRFVIPIWYLNH
Sbjct: 1   MGIHLTGIANAKQKLQRTFSAKYGIGSAVTTTNVPKGHFAVYVGETQKKRFVIPIWYLNH 60

Query: 87  PLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALNCS 127
           PLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALNCS
Sbjct: 61  PLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALNCS 102

[Close]

BLAST of Clc02G04780 vs. NCBI nr
Match: XP_022952478.1 (auxin-induced protein 15A-like [Cucurbita moschata])

HSP 1 Score: 206.5 bits (524), Expect = 1.4e-49
Identity = 101/116 (87.07%), Postives = 104/116 (89.66%), Query Frame = 0


Query: 11  KAIQKQGIVLVLKHTEMGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGET 70
           K   K G +L    TEMGIHLTGIANAKQKLQRT S KYGIGSAVTNVPKGHFAVYVGET
Sbjct: 45  KGNSKTGPLLSSNPTEMGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGET 104

Query: 71  QKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALNCS 127
           +KKRFVIPI YLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTS+LNCS
Sbjct: 105 RKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLNCS 160

[Close]

BLAST of Clc02G04780 vs. NCBI nr
Match: XP_022969514.1 (auxin-induced protein 15A-like [Cucurbita maxima])

HSP 1 Score: 206.5 bits (524), Expect = 1.4e-49
Identity = 101/116 (87.07%), Postives = 104/116 (89.66%), Query Frame = 0


Query: 11  KAIQKQGIVLVLKHTEMGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGET 70
           K   K G +L    TEMGIHLTGIANAKQKLQRT S KYGIGSAVTNVPKGHFAVYVGET
Sbjct: 45  KGNSKTGPLLSSNPTEMGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGET 104

Query: 71  QKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALNCS 127
           +KKRFVIPI YLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTS+LNCS
Sbjct: 105 RKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLNCS 160

[Close]

BLAST of Clc02G04780 vs. NCBI nr
Match: XP_011658585.1 (auxin-responsive protein SAUR21 [Cucumis sativus] >KGN43218.1 hypothetical protein Csa_020268 [Cucumis sativus])

HSP 1 Score: 204.5 bits (519), Expect = 5.3e-49
Identity = 97/102 (95.10%), Postives = 99/102 (97.06%), Query Frame = 0


Query: 27  MGIHLTGIANAKQKLQRTFSAKYGIGSAVT--NVPKGHFAVYVGETQKKRFVIPIWYLNH 86
           MGIHLTGIANAKQKLQRTFS KYGIGSAVT  NVPKGHFAVYVGETQKKRFV+PIWYLNH
Sbjct: 1   MGIHLTGIANAKQKLQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFVVPIWYLNH 60

Query: 87  PLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALNCS 127
           PLFKDLLNLAEEEFGFDHPMGGLTIPC+EDYFISLTSALNCS
Sbjct: 61  PLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFISLTSALNCS 102

[Close]

BLAST of Clc02G04780 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 6.1e-24
Identity = 57/98 (58.16%), Postives = 69/98 (70.41%), Query Frame = 0


Query: 27  MGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPL 86
           MG  L GI       ++T SA+    S V + PKG+ AVYVGE   KRFVIP+ +LN PL
Sbjct: 1   MGFRLPGI-------RKTLSARNEASSKVLDAPKGYLAVYVGENM-KRFVIPVSHLNQPL 60

Query: 87  FKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALN 125
           F+DLL+ AEEEFG+DHPMGGLTIPCSED F  +TS L+
Sbjct: 61  FQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQHITSCLS 90

[Close]

BLAST of Clc02G04780 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.4e-22
Identity = 50/82 (60.98%), Postives = 62/82 (75.61%), Query Frame = 0


Query: 42  QRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFD 101
           ++  S   G GSA    PKG  AVYVGE+QKKR+++P+ YLN P F+ LL+ +EEEFGFD
Sbjct: 11  KKILSRSTGAGSA---APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFD 70

Query: 102 HPMGGLTIPCSEDYFISLTSAL 124
           HPMGGLTIPC ED FI++TS L
Sbjct: 71  HPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Clc02G04780 vs. ExPASy Swiss-Prot
Match: Q9FJF6 (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 4.4e-22
Identity = 47/72 (65.28%), Postives = 60/72 (83.33%), Query Frame = 0


Query: 53  SAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCS 112
           +AV+  PKG  AVYVGE+QKKR+++P+ YLN P F+ LL+ +EEEFGFDHPMGGLTIPC 
Sbjct: 19  AAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCP 78

Query: 113 EDYFISLTSALN 125
           ED FI++TS L+
Sbjct: 79  EDTFINVTSRLH 90

[Close]

BLAST of Clc02G04780 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 7.5e-22
Identity = 53/98 (54.08%), Postives = 66/98 (67.35%), Query Frame = 0


Query: 27  MGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPL 86
           MG  L GI       ++T  A     S    VPKG+  VYVG+ + +RF+IP+ YLN P 
Sbjct: 1   MGFRLPGI-------RKTSIAANQASSKSVEVPKGYLVVYVGD-KMRRFLIPVSYLNQPS 60

Query: 87  FKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALN 125
           F+DLLN AEEEFG+DHPMGGLTIPC ED F+++TS LN
Sbjct: 61  FQDLLNQAEEEFGYDHPMGGLTIPCKEDEFLTVTSHLN 90

[Close]

BLAST of Clc02G04780 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 7.5e-22
Identity = 55/98 (56.12%), Postives = 63/98 (64.29%), Query Frame = 0


Query: 27  MGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPL 86
           MG  L GI  A               S   + PKG+ AVYVGE + KRFVIP+ YLN P 
Sbjct: 1   MGFRLPGIRKA---------------SKAADAPKGYLAVYVGE-KLKRFVIPVSYLNQPS 60

Query: 87  FKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALN 125
           F+DLL+ AEEEFG+DHPMGGLTIPCSED F  +TS LN
Sbjct: 61  FQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQCITSCLN 82

[Close]

BLAST of Clc02G04780 vs. ExPASy TrEMBL
Match: A0A6J1I2U1 (auxin-induced protein 15A-like OS=Cucurbita maxima OX=3661 GN=LOC111468489 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 6.7e-50
Identity = 101/116 (87.07%), Postives = 104/116 (89.66%), Query Frame = 0


Query: 11  KAIQKQGIVLVLKHTEMGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGET 70
           K   K G +L    TEMGIHLTGIANAKQKLQRT S KYGIGSAVTNVPKGHFAVYVGET
Sbjct: 45  KGNSKTGPLLSSNPTEMGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGET 104

Query: 71  QKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALNCS 127
           +KKRFVIPI YLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTS+LNCS
Sbjct: 105 RKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLNCS 160

[Close]

BLAST of Clc02G04780 vs. ExPASy TrEMBL
Match: A0A6J1GKP6 (auxin-induced protein 15A-like OS=Cucurbita moschata OX=3662 GN=LOC111455153 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 6.7e-50
Identity = 101/116 (87.07%), Postives = 104/116 (89.66%), Query Frame = 0


Query: 11  KAIQKQGIVLVLKHTEMGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGET 70
           K   K G +L    TEMGIHLTGIANAKQKLQRT S KYGIGSAVTNVPKGHFAVYVGET
Sbjct: 45  KGNSKTGPLLSSNPTEMGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGET 104

Query: 71  QKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALNCS 127
           +KKRFVIPI YLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTS+LNCS
Sbjct: 105 RKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLNCS 160

[Close]

BLAST of Clc02G04780 vs. ExPASy TrEMBL
Match: A0A0A0K174 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009140 PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.6e-49
Identity = 97/102 (95.10%), Postives = 99/102 (97.06%), Query Frame = 0


Query: 27  MGIHLTGIANAKQKLQRTFSAKYGIGSAVT--NVPKGHFAVYVGETQKKRFVIPIWYLNH 86
           MGIHLTGIANAKQKLQRTFS KYGIGSAVT  NVPKGHFAVYVGETQKKRFV+PIWYLNH
Sbjct: 1   MGIHLTGIANAKQKLQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFVVPIWYLNH 60

Query: 87  PLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALNCS 127
           PLFKDLLNLAEEEFGFDHPMGGLTIPC+EDYFISLTSALNCS
Sbjct: 61  PLFKDLLNLAEEEFGFDHPMGGLTIPCTEDYFISLTSALNCS 102

[Close]

BLAST of Clc02G04780 vs. ExPASy TrEMBL
Match: A0A5D3CL70 (Auxin-induced protein 15A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001000 PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 9.7e-49
Identity = 97/102 (95.10%), Postives = 98/102 (96.08%), Query Frame = 0


Query: 27  MGIHLTGIANAKQKLQRTFSAKYGIGSAVT--NVPKGHFAVYVGETQKKRFVIPIWYLNH 86
           MGIHLTGIANAKQKLQRTFS KYGIGSAVT  NVPKGHFAVYVGETQKKRFVIPIWYLNH
Sbjct: 1   MGIHLTGIANAKQKLQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFVIPIWYLNH 60

Query: 87  PLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALNCS 127
           PLFKDLLNLAEEEFGFDHP GGLTIPC+EDYFISLTSALNCS
Sbjct: 61  PLFKDLLNLAEEEFGFDHPTGGLTIPCTEDYFISLTSALNCS 102

[Close]

BLAST of Clc02G04780 vs. ExPASy TrEMBL
Match: A0A1S3BIQ8 (auxin-induced protein 15A OS=Cucumis melo OX=3656 GN=LOC103490316 PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 9.7e-49
Identity = 97/102 (95.10%), Postives = 98/102 (96.08%), Query Frame = 0


Query: 27  MGIHLTGIANAKQKLQRTFSAKYGIGSAVT--NVPKGHFAVYVGETQKKRFVIPIWYLNH 86
           MGIHLTGIANAKQKLQRTFS KYGIGSAVT  NVPKGHFAVYVGETQKKRFVIPIWYLNH
Sbjct: 1   MGIHLTGIANAKQKLQRTFSGKYGIGSAVTTNNVPKGHFAVYVGETQKKRFVIPIWYLNH 60

Query: 87  PLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALNCS 127
           PLFKDLLNLAEEEFGFDHP GGLTIPC+EDYFISLTSALNCS
Sbjct: 61  PLFKDLLNLAEEEFGFDHPTGGLTIPCTEDYFISLTSALNCS 102

[Close]

BLAST of Clc02G04780 vs. TAIR 10
Match: AT4G34770.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 142.5 bits (358), Expect = 2.3e-34
Identity = 72/104 (69.23%), Postives = 81/104 (77.88%), Query Frame = 0


Query: 27  MGIHLTGIANAKQKLQRTFSAKYG---IGSAVTNVPKGHFAVYVGET-QKKRFVIPIWYL 86
           MGI L G++ AKQKLQR+ SA+       S   NVPKGH AVYVGET  +KRFVIPI YL
Sbjct: 1   MGIQLIGLSQAKQKLQRSLSARIASLLATSGTNNVPKGHVAVYVGETYHRKRFVIPISYL 60

Query: 87  NHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALNCS 127
           NHPLF+ LLNLAEEEFGFDHPMGGLTIPC+EDYF +L S L+ S
Sbjct: 61  NHPLFQGLLNLAEEEFGFDHPMGGLTIPCTEDYFTALASILSGS 104

[Close]

BLAST of Clc02G04780 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.4 bits (272), Expect = 2.2e-24
Identity = 51/91 (56.04%), Postives = 64/91 (70.33%), Query Frame = 0


Query: 34  IANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNL 93
           + ++KQ L++         S+  +VPKG+ AVYVGE   KRFV+P+ YL+ P F+DLL  
Sbjct: 9   LQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQPSFQDLLRK 68

Query: 94  AEEEFGFDHPMGGLTIPCSEDYFISLTSALN 125
           AEEEFGFDHPMGGLTIPCSE+ FI L S  N
Sbjct: 69  AEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]

BLAST of Clc02G04780 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 107.5 bits (267), Expect = 8.2e-24
Identity = 53/101 (52.48%), Postives = 69/101 (68.32%), Query Frame = 0


Query: 27  MGIHLTGIANAKQKLQRTFSAKYGIGSAVTNVPKGHFAVYVGE-TQKKRFVIPIWYLNHP 86
           M I ++ +  + ++L ++ S      S    +PKGH AVYVGE  QK+RFV+P+ YL+HP
Sbjct: 1   MAIRISRVLQSSKQLLKSLSH----SSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHP 60

Query: 87  LFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSALNCS 127
            F+ LL  AEEEFGFDHPMGGLTIPC+E  FI L S L+ S
Sbjct: 61  CFQKLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of Clc02G04780 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 105.9 bits (263), Expect = 2.4e-23
Identity = 50/82 (60.98%), Postives = 62/82 (75.61%), Query Frame = 0


Query: 42  QRTFSAKYGIGSAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFD 101
           ++  S   G GSA    PKG  AVYVGE+QKKR+++P+ YLN P F+ LL+ +EEEFGFD
Sbjct: 11  KKILSRSTGAGSA---APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFD 70

Query: 102 HPMGGLTIPCSEDYFISLTSAL 124
           HPMGGLTIPC ED FI++TS L
Sbjct: 71  HPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of Clc02G04780 vs. TAIR 10
Match: AT5G18060.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 105.5 bits (262), Expect = 3.1e-23
Identity = 47/72 (65.28%), Postives = 60/72 (83.33%), Query Frame = 0


Query: 53  SAVTNVPKGHFAVYVGETQKKRFVIPIWYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCS 112
           +AV+  PKG  AVYVGE+QKKR+++P+ YLN P F+ LL+ +EEEFGFDHPMGGLTIPC 
Sbjct: 19  AAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCP 78

Query: 113 EDYFISLTSALN 125
           ED FI++TS L+
Sbjct: 79  EDTFINVTSRLH 90

The following BLAST results are available for this feature:

BLAST of Clc02G04780 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6572092.1	3.7e-50	83.74	Indole-3-acetic acid-induced protein ARG7, partial [Cucurbita argyrosperma subsp...	[more]
XP_038887902.1	6.2e-50	98.04	auxin-induced protein 15A-like [Benincasa hispida]	[more]
XP_022952478.1	1.4e-49	87.07	auxin-induced protein 15A-like [Cucurbita moschata]	[more]
XP_022969514.1	1.4e-49	87.07	auxin-induced protein 15A-like [Cucurbita maxima]	[more]
XP_011658585.1	5.3e-49	95.10	auxin-responsive protein SAUR21 [Cucumis sativus] >KGN43218.1 hypothetical prote...	[more]

BLAST of Clc02G04780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P32295	6.1e-24	58.16	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ...	[more]
Q9FK62	3.4e-22	60.98	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJF6	4.4e-22	65.28	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 S...	[more]
P33080	7.5e-22	54.08	Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33081	7.5e-22	56.12	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of Clc02G04780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I2U1	6.7e-50	87.07	auxin-induced protein 15A-like OS=Cucurbita maxima OX=3661 GN=LOC111468489 PE=3 ...	[more]
A0A6J1GKP6	6.7e-50	87.07	auxin-induced protein 15A-like OS=Cucurbita moschata OX=3662 GN=LOC111455153 PE=...	[more]
A0A0A0K174	2.6e-49	95.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009140 PE=3 SV=1	[more]
A0A5D3CL70	9.7e-49	95.10	Auxin-induced protein 15A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3BIQ8	9.7e-49	95.10	auxin-induced protein 15A OS=Cucumis melo OX=3656 GN=LOC103490316 PE=3 SV=1	[more]

BLAST of Clc02G04780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34770.1	2.3e-34	69.23	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	2.2e-24	56.04	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	8.2e-24	52.48	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	2.4e-23	60.98	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	3.1e-23	65.28	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 44..122 e-value: 1.2E-25 score: 89.5
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 29..126
None	No IPR available	PANTHER	PTHR31929:SF91	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY	coord: 29..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G04780.2	Clc02G04780.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin