Clc02G04680 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G04680
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Peptidyl-prolyl cis-trans isomerase
Location	ClcChr02: 4076343 .. 4077666 (-)
RNA-Seq Expression	Clc02G04680
Synteny	Clc02G04680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTGATCCAACGGAGGATATCGAGTTTCCATAGATACACTCGAAGCTTGACCGCTATATAATATGATTGCCCCACCGAACCCTAAATTCATATCAGTCTTCTTCGATAAGAAATTTCGGAACTCAGAGAAACAAACAACAATGCCAAACCCTAGAGTTTTCTTCGACATGACAATCGGCGGCCAACCAGCCGGCCGGATCGTGATGGAGCTGTACGCCGATGTCACTCCCCGCACGGCCGAGAACTTCCGTGCACTCTGCACTGGTGAGAAAGGAGTCGGTAGGAGCGGCAAACCCCTTCATTACAAGGGATCATCGTTCCACCGTGTGATCCCTAATTTCATGTGCCAGGGAGGCGATTTCACAGCCGGAAATGGTACAGGAGGTGAATCGATCTACGGCGCTAAGTTCGCCGACGAGAACTTCATCAAGAAGCACACCGGACCTGGTATTCTATCCATGGCGAATGCTGGACCTGGAACCAACGGATCTCAGTTCTTCATTTGTACCGCTAAGACCGAGTGGCTCGATGGAAAGCACGTCGTGTTCGGTCAAGTCGTCGAAGGCATGGATGTGGTAAAGGCCATCGAGAAAGTCGGGTCGAGCTCTGGAAGGACCTCGAGACCGGTTGTTGTTTCTGATTGTGGCCAGCTCTCTTAGATTGGTGGATGCTAGCTCTACCGCCGTCATCTGCTCCGGCGAAATCGTATCTATGATCATTTCCTATTTGCGTGTGTTGTTTTAACTTGCTGCGAATATGGGTCTTTGTGAGTCTCCTATTTAGGACTATGGGTCATGGGTTTGTGCTACTTCTTGAGATTATGTGCAGCTGCCCTTTTACCTTTCTGTTAAATGGCGGTTTTGCGGTGGTTTTTCCTAGACATAATTGGTTGTTCAAACCGAGGACCTTCAATAATATGGCTGTCTTTAACTCATTCCTCTTTTCACCTTTTTGCATTTGCATAATCATCAATTTGATTTGGGATTTTACCATGAATTTTCATCATTCTGACTGTTAGAGACTTGAATCGTTATCCCATTTCCCCAAAATTGGATAGGATGAAGGATTTTAGTATATCTGTTGATCTGATTTTGTGGAATGAGTATTTGTTCATATTGTTTATTGATGGTTTGGCACTAGATTTTGCTCTGGGTGCACTGACTGTAGTCAATGAAGATATGATTCTTTATTGAGATTTCTTTGTTTATATTATTGTGATTGCTTTTGGAAAGGAAAGCTTGTTTTGGAAAATAAAGTTTTGAGATTGGCCATGGCTAACTATATTTGTTTGAATTTGATGATGCCGTGGAAAAGCCGGTGGTGG

mRNA sequence

CCTGATCCAACGGAGGATATCGAGTTTCCATAGATACACTCGAAGCTTGACCGCTATATAATATGATTGCCCCACCGAACCCTAAATTCATATCAGTCTTCTTCGATAAGAAATTTCGGAACTCAGAGAAACAAACAACAATGCCAAACCCTAGAGTTTTCTTCGACATGACAATCGGCGGCCAACCAGCCGGCCGGATCGTGATGGAGCTGTACGCCGATGTCACTCCCCGCACGGCCGAGAACTTCCGTGCACTCTGCACTGGTGAGAAAGGAGTCGGTAGGAGCGGCAAACCCCTTCATTACAAGGGATCATCGTTCCACCGTGTGATCCCTAATTTCATGTGCCAGGGAGGCGATTTCACAGCCGGAAATGGTACAGGAGGTGAATCGATCTACGGCGCTAAGTTCGCCGACGAGAACTTCATCAAGAAGCACACCGGACCTGGTATTCTATCCATGGCGAATGCTGGACCTGGAACCAACGGATCTCAGTTCTTCATTTGTACCGCTAAGACCGAGTGGCTCGATGGAAAGCACGTCGTGTTCGGTCAAGTCGTCGAAGGCATGGATGTGGTAAAGGCCATCGAGAAAGTCGGGTCGAGCTCTGGAAGGACCTCGAGACCGGTTGTTGTTTCTGATTGTGGCCAGCTCTCTTAGATTGGTGGATGCTAGCTCTACCGCCGTCATCTGCTCCGGCGAAATCGTATCTATGATCATTTCCTATTTGCGTGTGTTGTTTTAACTTGCTGCGAATATGGGTCTTTGTGAGTCTCCTATTTAGGACTATGGGTCATGGGTTTGTGCTACTTCTTGAGATTATGTGCAGCTGCCCTTTTACCTTTCTGTTAAATGGCGGTTTTGCGGTGGTTTTTCCTAGACATAATTGGTTGTTCAAACCGAGGACCTTCAATAATATGGCTGTCTTTAACTCATTCCTCTTTTCACCTTTTTGCATTTGCATAATCATCAATTTGATTTGGGATTTTACCATGAATTTTCATCATTCTGACTGTTAGAGACTTGAATCGTTATCCCATTTCCCCAAAATTGGATAGGATGAAGGATTTTAGTATATCTGTTGATCTGATTTTGTGGAATGAGTATTTGTTCATATTGTTTATTGATGGTTTGGCACTAGATTTTGCTCTGGGTGCACTGACTGTAGTCAATGAAGATATGATTCTTTATTGAGATTTCTTTGTTTATATTATTGTGATTGCTTTTGGAAAGGAAAGCTTGTTTTGGAAAATAAAGTTTTGAGATTGGCCATGGCTAACTATATTTGTTTGAATTTGATGATGCCGTGGAAAAGCCGGTGGTGG

Coding sequence (CDS)

ATGATTGCCCCACCGAACCCTAAATTCATATCAGTCTTCTTCGATAAGAAATTTCGGAACTCAGAGAAACAAACAACAATGCCAAACCCTAGAGTTTTCTTCGACATGACAATCGGCGGCCAACCAGCCGGCCGGATCGTGATGGAGCTGTACGCCGATGTCACTCCCCGCACGGCCGAGAACTTCCGTGCACTCTGCACTGGTGAGAAAGGAGTCGGTAGGAGCGGCAAACCCCTTCATTACAAGGGATCATCGTTCCACCGTGTGATCCCTAATTTCATGTGCCAGGGAGGCGATTTCACAGCCGGAAATGGTACAGGAGGTGAATCGATCTACGGCGCTAAGTTCGCCGACGAGAACTTCATCAAGAAGCACACCGGACCTGGTATTCTATCCATGGCGAATGCTGGACCTGGAACCAACGGATCTCAGTTCTTCATTTGTACCGCTAAGACCGAGTGGCTCGATGGAAAGCACGTCGTGTTCGGTCAAGTCGTCGAAGGCATGGATGTGGTAAAGGCCATCGAGAAAGTCGGGTCGAGCTCTGGAAGGACCTCGAGACCGGTTGTTGTTTCTGATTGTGGCCAGCTCTCTTAG

Protein sequence

MIAPPNPKFISVFFDKKFRNSEKQTTMPNPRVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFFICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTSRPVVVSDCGQLS

Homology

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BLAST of Clc02G04680 vs. NCBI nr
Match: XP_008447986.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase [Cucumis melo] >KAA0049729.1 peptidyl-prolyl cis-trans isomerase [Cucumis melo var. makuwa] >TYK12146.1 peptidyl-prolyl cis-trans isomerase [Cucumis melo var. makuwa])

HSP 1 Score: 350.9 bits (899), Expect = 7.2e-93
Identity = 164/172 (95.35%), Postives = 171/172 (99.42%), Query Frame = 0


Query: 27  MPNPRVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 86
           MPNP+VFFDM+IGG PAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF
Sbjct: 1   MPNPKVFFDMSIGGAPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 60

Query: 87  HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 146
           HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF
Sbjct: 61  HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 120

Query: 147 ICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTSRPVVVSDCGQLS 199
           ICTAKT+WLDGKHVVFGQVVEGMDVVKA+EKVGSSSGRTS+PVV++DCGQLS
Sbjct: 121 ICTAKTDWLDGKHVVFGQVVEGMDVVKAVEKVGSSSGRTSKPVVIADCGQLS 172

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BLAST of Clc02G04680 vs. NCBI nr
Match: XP_038888644.1 (peptidyl-prolyl cis-trans isomerase [Benincasa hispida])

HSP 1 Score: 349.7 bits (896), Expect = 1.6e-92
Identity = 163/172 (94.77%), Postives = 171/172 (99.42%), Query Frame = 0


Query: 27  MPNPRVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 86
           MPNPRVFFDMT+GGQPAGRIVMEL+ADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF
Sbjct: 1   MPNPRVFFDMTVGGQPAGRIVMELFADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 60

Query: 87  HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 146
           HRVIP+FMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF
Sbjct: 61  HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 120

Query: 147 ICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTSRPVVVSDCGQLS 199
           ICTAKTEWLDGKHVVFGQV+EGMDVVKA+EKVGSSSGRTS+ VV++DCGQLS
Sbjct: 121 ICTAKTEWLDGKHVVFGQVIEGMDVVKAVEKVGSSSGRTSKAVVIADCGQLS 172

[Close]

BLAST of Clc02G04680 vs. NCBI nr
Match: KAG4979361.1 (hypothetical protein JHK85_033319 [Glycine max])

HSP 1 Score: 349.7 bits (896), Expect = 1.6e-92
Identity = 164/173 (94.80%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 26   TMPNPRVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSS 85
            TMPNP+VFFDMTIGGQPAGRIVMELYADVTP TAENFRALCTGEKG GRSGKPLHYKGSS
Sbjct: 1999 TMPNPKVFFDMTIGGQPAGRIVMELYADVTPSTAENFRALCTGEKGAGRSGKPLHYKGSS 2058

Query: 86   FHRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQF 145
            FHRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENF+KKHTGPGILSMANAGPGTNGSQF
Sbjct: 2059 FHRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFVKKHTGPGILSMANAGPGTNGSQF 2118

Query: 146  FICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTSRPVVVSDCGQLS 199
            FICT KTEWLDGKHVVFGQVVEGMDVVK IEKVGSSSGRT++PVVV+DCGQLS
Sbjct: 2119 FICTTKTEWLDGKHVVFGQVVEGMDVVKEIEKVGSSSGRTAKPVVVADCGQLS 2171

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BLAST of Clc02G04680 vs. NCBI nr
Match: KAG5139172.1 (hypothetical protein JHK84_032940 [Glycine max])

HSP 1 Score: 349.7 bits (896), Expect = 1.6e-92
Identity = 164/173 (94.80%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 26   TMPNPRVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSS 85
            TMPNP+VFFDMTIGGQPAGRIVMELYADVTP TAENFRALCTGEKG GRSGKPLHYKGSS
Sbjct: 1947 TMPNPKVFFDMTIGGQPAGRIVMELYADVTPSTAENFRALCTGEKGAGRSGKPLHYKGSS 2006

Query: 86   FHRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQF 145
            FHRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENF+KKHTGPGILSMANAGPGTNGSQF
Sbjct: 2007 FHRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFVKKHTGPGILSMANAGPGTNGSQF 2066

Query: 146  FICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTSRPVVVSDCGQLS 199
            FICT KTEWLDGKHVVFGQVVEGMDVVK IEKVGSSSGRT++PVVV+DCGQLS
Sbjct: 2067 FICTTKTEWLDGKHVVFGQVVEGMDVVKEIEKVGSSSGRTAKPVVVADCGQLS 2119

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BLAST of Clc02G04680 vs. NCBI nr
Match: KAG4985011.1 (hypothetical protein JHK86_032702 [Glycine max])

HSP 1 Score: 349.4 bits (895), Expect = 2.1e-92
Identity = 164/173 (94.80%), Postives = 169/173 (97.69%), Query Frame = 0


Query: 26   TMPNPRVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSS 85
            TMPNP+VFFDMTIGGQPAGRIVMELYADVTP TAENFRALCTGEKG GRSGKPLHYKGSS
Sbjct: 1890 TMPNPKVFFDMTIGGQPAGRIVMELYADVTPSTAENFRALCTGEKGAGRSGKPLHYKGSS 1949

Query: 86   FHRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQF 145
            FHRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENF+KKHTGPGILSMANAGPGTNGSQF
Sbjct: 1950 FHRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFLKKHTGPGILSMANAGPGTNGSQF 2009

Query: 146  FICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTSRPVVVSDCGQLS 199
            FICT KTEWLDGKHVVFGQVVEGMDVVK IEKVGSSSGRT++PVVV+DCGQLS
Sbjct: 2010 FICTTKTEWLDGKHVVFGQVVEGMDVVKEIEKVGSSSGRTAKPVVVADCGQLS 2062

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BLAST of Clc02G04680 vs. ExPASy Swiss-Prot
Match: Q39613 (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus OX=4058 GN=PCKR1 PE=1 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 2.8e-92
Identity = 160/172 (93.02%), Postives = 165/172 (95.93%), Query Frame = 0


Query: 27  MPNPRVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 86
           MPNPRVFFDM++GGQPAGRIVMEL+AD TPRTAENFRALCTGEKG GRSGKPLHYK SSF
Sbjct: 1   MPNPRVFFDMSVGGQPAGRIVMELFADTTPRTAENFRALCTGEKGTGRSGKPLHYKDSSF 60

Query: 87  HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 146
           HRVIP FMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGP TNGSQFF
Sbjct: 61  HRVIPGFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPNTNGSQFF 120

Query: 147 ICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTSRPVVVSDCGQLS 199
           ICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRT++ VVV DCGQLS
Sbjct: 121 ICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTAKKVVVEDCGQLS 172

[Close]

BLAST of Clc02G04680 vs. ExPASy Swiss-Prot
Match: Q8W171 (Peptidyl-prolyl cis-trans isomerase 1 OS=Glycine max OX=3847 GN=Cyp1 PE=2 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 1.4e-91
Identity = 157/172 (91.28%), Postives = 167/172 (97.09%), Query Frame = 0


Query: 27  MPNPRVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 86
           MPNP+VFFDMTIGGQ AGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF
Sbjct: 1   MPNPKVFFDMTIGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 60

Query: 87  HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 146
           HRVIP+FMCQGGDFTAGNGTGGESIYGAKFADENF+KKHTGPGILSMANAGPGTNGSQFF
Sbjct: 61  HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKKHTGPGILSMANAGPGTNGSQFF 120

Query: 147 ICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTSRPVVVSDCGQLS 199
           ICT KTEWLDGKHVVFGQV+EG++VVK IEKVGS SGRTS+PVV+++CGQ S
Sbjct: 121 ICTEKTEWLDGKHVVFGQVIEGLNVVKDIEKVGSGSGRTSKPVVIANCGQPS 172

[Close]

BLAST of Clc02G04680 vs. ExPASy Swiss-Prot
Match: O49886 (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus OX=3873 PE=2 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 4.2e-88
Identity = 151/172 (87.79%), Postives = 161/172 (93.60%), Query Frame = 0


Query: 27  MPNPRVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 86
           M NP+VFFDM I G PAGRIVMELYAD TPRTAENFRALCTGEKGVGRSGKPLHYKGS+F
Sbjct: 1   MSNPKVFFDMAIAGNPAGRIVMELYADTTPRTAENFRALCTGEKGVGRSGKPLHYKGSTF 60

Query: 87  HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 146
           HRVIPNFMCQGGDFTAGNGTG ESIYGAKFADENFIK+HTGPGILSMANAG GTNGSQFF
Sbjct: 61  HRVIPNFMCQGGDFTAGNGTGAESIYGAKFADENFIKRHTGPGILSMANAGAGTNGSQFF 120

Query: 147 ICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTSRPVVVSDCGQLS 199
           ICT KTEWLDGKHVVFG+V+EGM+VV+ IEKVGS SG+TSRPV ++DCGQLS
Sbjct: 121 ICTEKTEWLDGKHVVFGKVIEGMNVVRDIEKVGSGSGKTSRPVTIADCGQLS 172

[Close]

BLAST of Clc02G04680 vs. ExPASy Swiss-Prot
Match: P21568 (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum OX=4081 GN=CYP PE=2 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.2e-87
Identity = 148/171 (86.55%), Postives = 161/171 (94.15%), Query Frame = 0


Query: 27  MPNPRVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 86
           M NP+VFFD+TIGG PAGR+VMEL+AD TP+TAENFRALCTGEKGVG+ GKPLHYKGS+F
Sbjct: 1   MANPKVFFDLTIGGAPAGRVVMELFADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTF 60

Query: 87  HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 146
           HRVIP FMCQGGDFTAGNGTGGESIYGAKF DENF+KKHTGPGILSMANAGPGTNGSQFF
Sbjct: 61  HRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDENFVKKHTGPGILSMANAGPGTNGSQFF 120

Query: 147 ICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTSRPVVVSDCGQL 198
           ICTAKTEWL+GKHVVFGQVVEGMDV+K  E VGSSSGR S+PVV++DCGQL
Sbjct: 121 ICTAKTEWLNGKHVVFGQVVEGMDVIKKAEAVGSSSGRCSKPVVIADCGQL 171

[Close]

BLAST of Clc02G04680 vs. ExPASy Swiss-Prot
Match: Q9SKQ0 (Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana OX=3702 GN=CYP19-2 PE=2 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 3.4e-85
Identity = 144/170 (84.71%), Postives = 160/170 (94.12%), Query Frame = 0


Query: 29  NPRVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR 88
           +P+VFFDMTIGG PAG+IVMELY D TP+TAENFRALCTGEKGVGRSGKPLH+KGSSFHR
Sbjct: 4   HPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHR 63

Query: 89  VIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFFIC 148
           VIPNFMCQGGDFT GNGTGGESIYGAKF DENF +KHTGPGILSMANAG  TNGSQFFIC
Sbjct: 64  VIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFIC 123

Query: 149 TAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTSRPVVVSDCGQLS 199
           T KT+WLDGKHVVFGQVVEG+DVVKAIEK+GSSSG+ ++PVV++DCG++S
Sbjct: 124 TVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTKPVVIADCGEIS 173

[Close]

BLAST of Clc02G04680 vs. ExPASy TrEMBL
Match: A0A5A7U8B9 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00830 PE=3 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 3.5e-93
Identity = 164/172 (95.35%), Postives = 171/172 (99.42%), Query Frame = 0


Query: 27  MPNPRVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 86
           MPNP+VFFDM+IGG PAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF
Sbjct: 1   MPNPKVFFDMSIGGAPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 60

Query: 87  HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 146
           HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF
Sbjct: 61  HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 120

Query: 147 ICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTSRPVVVSDCGQLS 199
           ICTAKT+WLDGKHVVFGQVVEGMDVVKA+EKVGSSSGRTS+PVV++DCGQLS
Sbjct: 121 ICTAKTDWLDGKHVVFGQVVEGMDVVKAVEKVGSSSGRTSKPVVIADCGQLS 172

[Close]

BLAST of Clc02G04680 vs. ExPASy TrEMBL
Match: A0A1S3BJB0 (Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103490307 PE=3 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 3.5e-93
Identity = 164/172 (95.35%), Postives = 171/172 (99.42%), Query Frame = 0


Query: 27  MPNPRVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 86
           MPNP+VFFDM+IGG PAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF
Sbjct: 1   MPNPKVFFDMSIGGAPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 60

Query: 87  HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 146
           HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF
Sbjct: 61  HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 120

Query: 147 ICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTSRPVVVSDCGQLS 199
           ICTAKT+WLDGKHVVFGQVVEGMDVVKA+EKVGSSSGRTS+PVV++DCGQLS
Sbjct: 121 ICTAKTDWLDGKHVVFGQVVEGMDVVKAVEKVGSSSGRTSKPVVIADCGQLS 172

[Close]

BLAST of Clc02G04680 vs. ExPASy TrEMBL
Match: A0A7J9KRA2 (Peptidyl-prolyl cis-trans isomerase OS=Gossypium schwendimanii OX=34291 GN=Goshw_010288 PE=3 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.7e-92
Identity = 165/170 (97.06%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 29  NPRVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR 88
           NPRVFFDMTIGGQPAGRIVMEL+AD TPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR
Sbjct: 4   NPRVFFDMTIGGQPAGRIVMELFADCTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR 63

Query: 89  VIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFFIC 148
           VIPNFMCQGGDFTAGNGTGGESIYG+KFADENFIKKHTGPGILSMANAGPGTNGSQFFIC
Sbjct: 64  VIPNFMCQGGDFTAGNGTGGESIYGSKFADENFIKKHTGPGILSMANAGPGTNGSQFFIC 123

Query: 149 TAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTSRPVVVSDCGQLS 199
           TAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTS+PVVV+DCGQLS
Sbjct: 124 TAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTSKPVVVADCGQLS 173

[Close]

BLAST of Clc02G04680 vs. ExPASy TrEMBL
Match: A0A7J8R2J3 (Peptidyl-prolyl cis-trans isomerase OS=Gossypium davidsonii OX=34287 GN=Godav_019884 PE=3 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.7e-92
Identity = 165/170 (97.06%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 29  NPRVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR 88
           NPRVFFDMTIGGQPAGRIVMEL+AD TPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR
Sbjct: 4   NPRVFFDMTIGGQPAGRIVMELFADCTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR 63

Query: 89  VIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFFIC 148
           VIPNFMCQGGDFTAGNGTGGESIYG+KFADENFIKKHTGPGILSMANAGPGTNGSQFFIC
Sbjct: 64  VIPNFMCQGGDFTAGNGTGGESIYGSKFADENFIKKHTGPGILSMANAGPGTNGSQFFIC 123

Query: 149 TAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTSRPVVVSDCGQLS 199
           TAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTS+PVVV+DCGQLS
Sbjct: 124 TAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTSKPVVVADCGQLS 173

[Close]

BLAST of Clc02G04680 vs. ExPASy TrEMBL
Match: A0A7J8LFB9 (Peptidyl-prolyl cis-trans isomerase OS=Gossypium lobatum OX=34289 GN=Golob_021926 PE=3 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.7e-92
Identity = 165/170 (97.06%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 29  NPRVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR 88
           NPRVFFDMTIGGQPAGRIVMEL+AD TPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR
Sbjct: 4   NPRVFFDMTIGGQPAGRIVMELFADCTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR 63

Query: 89  VIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFFIC 148
           VIPNFMCQGGDFTAGNGTGGESIYG+KFADENFIKKHTGPGILSMANAGPGTNGSQFFIC
Sbjct: 64  VIPNFMCQGGDFTAGNGTGGESIYGSKFADENFIKKHTGPGILSMANAGPGTNGSQFFIC 123

Query: 149 TAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTSRPVVVSDCGQLS 199
           TAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTS+PVVV+DCGQLS
Sbjct: 124 TAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTSKPVVVADCGQLS 173

[Close]

BLAST of Clc02G04680 vs. TAIR 10
Match: AT2G21130.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein )

HSP 1 Score: 315.8 bits (808), Expect = 2.4e-86
Identity = 144/170 (84.71%), Postives = 160/170 (94.12%), Query Frame = 0


Query: 29  NPRVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR 88
           +P+VFFDMTIGG PAG+IVMELY D TP+TAENFRALCTGEKGVGRSGKPLH+KGSSFHR
Sbjct: 4   HPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHR 63

Query: 89  VIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFFIC 148
           VIPNFMCQGGDFT GNGTGGESIYGAKF DENF +KHTGPGILSMANAG  TNGSQFFIC
Sbjct: 64  VIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFIC 123

Query: 149 TAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTSRPVVVSDCGQLS 199
           T KT+WLDGKHVVFGQVVEG+DVVKAIEK+GSSSG+ ++PVV++DCG++S
Sbjct: 124 TVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTKPVVIADCGEIS 173

[Close]

BLAST of Clc02G04680 vs. TAIR 10
Match: AT4G38740.1 (rotamase CYP 1 )

HSP 1 Score: 314.7 bits (805), Expect = 5.3e-86
Identity = 147/172 (85.47%), Postives = 159/172 (92.44%), Query Frame = 0


Query: 27  MPNPRVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 86
           M  P+V+FDMTI GQPAGRIVMELY D TPRTAENFRALCTGEKGVG +GKPLH+KGS F
Sbjct: 1   MAFPKVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKF 60

Query: 87  HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 146
           HRVIPNFMCQGGDFTAGNGTGGESIYG+KF DENF +KHTGPGILSMANAG  TNGSQFF
Sbjct: 61  HRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFF 120

Query: 147 ICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTSRPVVVSDCGQLS 199
           ICT KT+WLDGKHVVFGQVVEG+DVVKAIEKVGSSSG+ ++PVVV+DCGQLS
Sbjct: 121 ICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSGKPTKPVVVADCGQLS 172

[Close]

BLAST of Clc02G04680 vs. TAIR 10
Match: AT2G16600.1 (rotamase CYP 3 )

HSP 1 Score: 314.3 bits (804), Expect = 6.9e-86
Identity = 143/170 (84.12%), Postives = 158/170 (92.94%), Query Frame = 0


Query: 29  NPRVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSFHR 88
           NP+V+FDMT+GG+ AGRIVMELYAD TP TAENFRALCTGE+G+G+ GKPLHYKGSSFHR
Sbjct: 4   NPKVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHR 63

Query: 89  VIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFFIC 148
           VIP FMCQGGDFTAGNGTGGESIYG+KF DENFIKKHTGPGILSMANAG  TNGSQFFIC
Sbjct: 64  VIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFIC 123

Query: 149 TAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTSRPVVVSDCGQLS 199
           T KT WLDGKHVVFGQVVEG++VV+ IEKVGS SGRTS+PVV++DCGQ+S
Sbjct: 124 TEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGRTSKPVVIADCGQIS 173

[Close]

BLAST of Clc02G04680 vs. TAIR 10
Match: AT4G34870.1 (rotamase cyclophilin 5 )

HSP 1 Score: 301.2 bits (770), Expect = 6.1e-82
Identity = 140/172 (81.40%), Postives = 153/172 (88.95%), Query Frame = 0


Query: 27  MPNPRVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 86
           M NPRVFFDM++ G P GRI MEL+AD TP TAENFRALCTGEKG+G+ GKPLH+KGS F
Sbjct: 1   MSNPRVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIF 60

Query: 87  HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 146
           HRVIP FMCQGGDFTA NGTGGESIYGAKF DENFIKKHTG GILSMAN+GP TNGSQFF
Sbjct: 61  HRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFF 120

Query: 147 ICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTSRPVVVSDCGQLS 199
           ICT KT WLDGKHVVFGQVV+G+DVVKAIEKVGS SG+TS+ V ++DCGQLS
Sbjct: 121 ICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGKTSKVVTITDCGQLS 172

[Close]

BLAST of Clc02G04680 vs. TAIR 10
Match: AT3G56070.1 (rotamase cyclophilin 2 )

HSP 1 Score: 283.1 bits (723), Expect = 1.7e-76
Identity = 129/171 (75.44%), Postives = 146/171 (85.38%), Query Frame = 0


Query: 27  MPNPRVFFDMTIGGQPAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 86
           M NP+VFFD+ IG   AGR+VMEL+ADVTPRTA NFRALCTGE G+G++GK LHYKGS+F
Sbjct: 1   MANPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAF 60

Query: 87  HRVIPNFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPGTNGSQFF 146
           HR+IP FMCQGGDFT GNGTGGESIYG+KF DENF  KHTGPGILSMAN+GP TNGSQFF
Sbjct: 61  HRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFF 120

Query: 147 ICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTSRPVVVSDCGQL 198
           ICT KT WLDGKHVVFG+VV+G +VVKA+E VGS  G  S  VV+ DCG+L
Sbjct: 121 ICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGNPSERVVIEDCGEL 171

The following BLAST results are available for this feature:

BLAST of Clc02G04680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447986.1	7.2e-93	95.35	PREDICTED: peptidyl-prolyl cis-trans isomerase [Cucumis melo] >KAA0049729.1 pept...	[more]
XP_038888644.1	1.6e-92	94.77	peptidyl-prolyl cis-trans isomerase [Benincasa hispida]	[more]
KAG4979361.1	1.6e-92	94.80	hypothetical protein JHK85_033319 [Glycine max]	[more]
KAG5139172.1	1.6e-92	94.80	hypothetical protein JHK84_032940 [Glycine max]	[more]
KAG4985011.1	2.1e-92	94.80	hypothetical protein JHK86_032702 [Glycine max]	[more]

BLAST of Clc02G04680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39613	2.8e-92	93.02	Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus OX=4058 GN=PCKR1 PE=1...	[more]
Q8W171	1.4e-91	91.28	Peptidyl-prolyl cis-trans isomerase 1 OS=Glycine max OX=3847 GN=Cyp1 PE=2 SV=1	[more]
O49886	4.2e-88	87.79	Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus OX=3873 PE=2 SV=1	[more]
P21568	1.2e-87	86.55	Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum OX=4081 GN=CYP PE=2 ...	[more]
Q9SKQ0	3.4e-85	84.71	Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]

BLAST of Clc02G04680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U8B9	3.5e-93	95.35	Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3BJB0	3.5e-93	95.35	Peptidyl-prolyl cis-trans isomerase OS=Cucumis melo OX=3656 GN=LOC103490307 PE=3...	[more]
A0A7J9KRA2	1.7e-92	97.06	Peptidyl-prolyl cis-trans isomerase OS=Gossypium schwendimanii OX=34291 GN=Goshw...	[more]
A0A7J8R2J3	1.7e-92	97.06	Peptidyl-prolyl cis-trans isomerase OS=Gossypium davidsonii OX=34287 GN=Godav_01...	[more]
A0A7J8LFB9	1.7e-92	97.06	Peptidyl-prolyl cis-trans isomerase OS=Gossypium lobatum OX=34289 GN=Golob_02192...	[more]

BLAST of Clc02G04680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21130.1	2.4e-86	84.71	Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein	[more]
AT4G38740.1	5.3e-86	85.47	rotamase CYP 1	[more]
AT2G16600.1	6.9e-86	84.12	rotamase CYP 3	[more]
AT4G34870.1	6.1e-82	81.40	rotamase cyclophilin 5	[more]
AT3G56070.1	1.7e-76	75.44	rotamase cyclophilin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PRINTS	PR00153	CSAPPISMRASE	coord: 144..156 score: 69.29 coord: 157..172 score: 72.77 coord: 129..144 score: 81.15 coord: 86..98 score: 81.69 coord: 50..65 score: 62.55
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00160	Pro_isomerase	coord: 34..195 e-value: 1.1E-49 score: 168.7
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PROSITE	PS50072	CSA_PPIASE_2	coord: 33..196 score: 46.428383
IPR029000	Cyclophilin-like domain superfamily	GENE3D	2.40.100.10		coord: 17..198 e-value: 2.6E-87 score: 293.9
IPR029000	Cyclophilin-like domain superfamily	SUPERFAMILY	50891	Cyclophilin-like	coord: 25..197
IPR024936	Cyclophilin-type peptidyl-prolyl cis-trans isomerase	PIRSF	PIRSF001467	Peptidylpro_ismrse	coord: 18..198 e-value: 2.7E-81 score: 269.3
None	No IPR available	PANTHER	PTHR11071:SF439	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 27..198
None	No IPR available	PANTHER	PTHR11071	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 27..198
None	No IPR available	CDD	cd01926	cyclophilin_ABH_like	coord: 30..195 e-value: 2.49841E-121 score: 338.462
IPR020892	Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site	PROSITE	PS00170	CSA_PPIASE_1	coord: 81..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G04680.1	Clc02G04680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0016018	cyclosporin A binding
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity