Clc02G02830 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G02830
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	FAS1 domain-containing protein
Location	ClcChr02: 2500784 .. 2501377 (+)
RNA-Seq Expression	Clc02G02830
Synteny	Clc02G02830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCCTGGTTTTTTGTTTTTCTCTTCTTAGTTGCAAAAGCTCAGGCTACAACGATTAACCAAACCGACTTGCAAGTGGCCATGGATGAGATGAGATTGAAATCTTACCATGGCTTTGTCATACTACTCAAGATCTTAAACAGCTCCCATAAAACCTTGCAAAACTCAGATATAACCTTCTTCATGCCCACTGATCAGGAACTTTCTCAAGCTGCAATCTCCCCGGACGGACTAGAAGATTTTGTTCTAAGCCATTCTATCCCCACAGCCTTACTGCTCAACAATCTTTTACACTTCCCAAATGGCAGCCTGGTTCCAACAAGCATCCCAAACAGAATGATCAGCATAACCAACTGCAGAAAGATGGGTGTGTGTGTGAACAATGCACGAATCGTCACCCCGAACGTGTGCTTAACCTCAACCATAAGATGTCATGGTATAAGCACAAGTATTACATATGACAAAACTTCCTTTTCAGATACTTTACCAGCCAAGCAGAGTTCAGCTGAAACTATAGTTCAAAGGAATGAAAAGAAAGGAGCAAAATCTTTACAGTCTGCAGCAATGAAGAAGAACCGTCCACTGCACTGA

mRNA sequence

ATGGCTCCCTGGTTTTTTGTTTTTCTCTTCTTAGTTGCAAAAGCTCAGGCTACAACGATTAACCAAACCGACTTGCAAGTGGCCATGGATGAGATGAGATTGAAATCTTACCATGGCTTTGTCATACTACTCAAGATCTTAAACAGCTCCCATAAAACCTTGCAAAACTCAGATATAACCTTCTTCATGCCCACTGATCAGGAACTTTCTCAAGCTGCAATCTCCCCGGACGGACTAGAAGATTTTGTTCTAAGCCATTCTATCCCCACAGCCTTACTGCTCAACAATCTTTTACACTTCCCAAATGGCAGCCTGGTTCCAACAAGCATCCCAAACAGAATGATCAGCATAACCAACTGCAGAAAGATGGGTGTGTGTGTGAACAATGCACGAATCGTCACCCCGAACGTGTGCTTAACCTCAACCATAAGATGTCATGGTATAAGCACAAGTATTACATATGACAAAACTTCCTTTTCAGATACTTTACCAGCCAAGCAGAGTTCAGCTGAAACTATAGTTCAAAGGAATGAAAAGAAAGGAGCAAAATCTTTACAGTCTGCAGCAATGAAGAAGAACCGTCCACTGCACTGA

Coding sequence (CDS)

ATGGCTCCCTGGTTTTTTGTTTTTCTCTTCTTAGTTGCAAAAGCTCAGGCTACAACGATTAACCAAACCGACTTGCAAGTGGCCATGGATGAGATGAGATTGAAATCTTACCATGGCTTTGTCATACTACTCAAGATCTTAAACAGCTCCCATAAAACCTTGCAAAACTCAGATATAACCTTCTTCATGCCCACTGATCAGGAACTTTCTCAAGCTGCAATCTCCCCGGACGGACTAGAAGATTTTGTTCTAAGCCATTCTATCCCCACAGCCTTACTGCTCAACAATCTTTTACACTTCCCAAATGGCAGCCTGGTTCCAACAAGCATCCCAAACAGAATGATCAGCATAACCAACTGCAGAAAGATGGGTGTGTGTGTGAACAATGCACGAATCGTCACCCCGAACGTGTGCTTAACCTCAACCATAAGATGTCATGGTATAAGCACAAGTATTACATATGACAAAACTTCCTTTTCAGATACTTTACCAGCCAAGCAGAGTTCAGCTGAAACTATAGTTCAAAGGAATGAAAAGAAAGGAGCAAAATCTTTACAGTCTGCAGCAATGAAGAAGAACCGTCCACTGCACTGA

Protein sequence

MAPWFFVFLFLVAKAQATTINQTDLQVAMDEMRLKSYHGFVILLKILNSSHKTLQNSDITFFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHFPNGSLVPTSIPNRMISITNCRKMGVCVNNARIVTPNVCLTSTIRCHGISTSITYDKTSFSDTLPAKQSSAETIVQRNEKKGAKSLQSAAMKKNRPLH

Homology

[Close]

BLAST of Clc02G02830 vs. NCBI nr
Match: XP_038887869.1 (uncharacterized protein LOC120077861 [Benincasa hispida])

HSP 1 Score: 362.1 bits (928), Expect = 3.1e-96
Identity = 186/197 (94.42%), Postives = 191/197 (96.95%), Query Frame = 0


Query: 1   MAPWFFVFLFLVAKAQATTINQTDLQVAMDEMRLKSYHGFVILLKILNSSHKTLQNSDIT 60
           MAPWFFV LFLVAKAQATTINQTDLQVAMDEMRLKSYHGFVILL ILNSSHKTLQNSDIT
Sbjct: 1   MAPWFFVLLFLVAKAQATTINQTDLQVAMDEMRLKSYHGFVILLNILNSSHKTLQNSDIT 60

Query: 61  FFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHFPNGSLVPTSIPNRMISITNC 120
           FFMP DQELS AAISPDGLEDFVLSHS+PTALLLNNLLHFPNGSLVP+SIPNRMISITNC
Sbjct: 61  FFMPNDQELSLAAISPDGLEDFVLSHSVPTALLLNNLLHFPNGSLVPSSIPNRMISITNC 120

Query: 121 RKMGVCVNNARIVTPNVCLTSTIRCHGISTSITYDKTSFSDTLPAKQSSAETIVQRNEKK 180
           RKMGVCVNNARIVTPNVCLTS+IRCHGIS++ITYDKTS SDTLPAKQSSAETIVQRNEKK
Sbjct: 121 RKMGVCVNNARIVTPNVCLTSSIRCHGISSTITYDKTSISDTLPAKQSSAETIVQRNEKK 180

Query: 181 GAKSLQSAAMKKNRPLH 198
            AKSLQSAAMKKNRPLH
Sbjct: 181 AAKSLQSAAMKKNRPLH 197

[Close]

BLAST of Clc02G02830 vs. NCBI nr
Match: XP_004149424.1 (uncharacterized protein LOC101220860 [Cucumis sativus])

HSP 1 Score: 333.6 bits (854), Expect = 1.2e-87
Identity = 172/197 (87.31%), Postives = 182/197 (92.39%), Query Frame = 0


Query: 1   MAPWFFVFLFLVAKAQATTINQTDLQVAMDEMRLKSYHGFVILLKILNSSHKTLQNSDIT 60
           MAPWFFV LFLVAKA AT  NQ DLQ AMDEMRLKSYHGF ILLKILNS+ KTLQNS+IT
Sbjct: 1   MAPWFFVLLFLVAKAHATMTNQIDLQAAMDEMRLKSYHGFAILLKILNSTTKTLQNSNIT 60

Query: 61  FFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHFPNGSLVPTSIPNRMISITNC 120
           FFMPTDQELSQA ISPD LE+FVLSHSIPTALLLNNLLHFPNG+LVP+SIPNRMI ITNC
Sbjct: 61  FFMPTDQELSQADISPDRLEEFVLSHSIPTALLLNNLLHFPNGTLVPSSIPNRMIRITNC 120

Query: 121 RKMGVCVNNARIVTPNVCLTSTIRCHGISTSITYDKTSFSDTLPAKQSSAETIVQRNEKK 180
           RKMGVC+NNARI+TPNVCLTS+IRCHGIST+I+YDKTSFSDTLPAKQSSAE IVQRNE K
Sbjct: 121 RKMGVCLNNARIITPNVCLTSSIRCHGISTAISYDKTSFSDTLPAKQSSAEIIVQRNEIK 180

Query: 181 GAKSLQSAAMKKNRPLH 198
           GAKSLQS AMKKNR LH
Sbjct: 181 GAKSLQSGAMKKNRSLH 197

[Close]

BLAST of Clc02G02830 vs. NCBI nr
Match: XP_008461950.1 (PREDICTED: uncharacterized protein LOC107990279 [Cucumis melo] >KAA0048757.1 fasciclin-like arabinogalactan protein 19 [Cucumis melo var. makuwa] >TYK31576.1 fasciclin-like arabinogalactan protein 19 [Cucumis melo var. makuwa])

HSP 1 Score: 318.2 bits (814), Expect = 5.1e-83
Identity = 165/198 (83.33%), Postives = 179/198 (90.40%), Query Frame = 0


Query: 1   MAPWFFVFLFLVAKAQATTINQTDLQVAMDEMRLKSYHGFVILLKILNSSHKTLQNSDIT 60
           MAPWFFV LFL+ KA AT  NQ DLQ AMD+MRLKSYHGF ILLKILNS+ KTLQNS+IT
Sbjct: 1   MAPWFFVLLFLMTKAHATMTNQIDLQAAMDQMRLKSYHGFTILLKILNSTTKTLQNSNIT 60

Query: 61  FFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHFPNGSLVPTSIPNRMISITNC 120
           FFMPTDQELSQA ISP+ L+DFVLSHSIPTALLLNNLLHFPNGSLVP+SIPNRMI ITNC
Sbjct: 61  FFMPTDQELSQADISPNRLKDFVLSHSIPTALLLNNLLHFPNGSLVPSSIPNRMIRITNC 120

Query: 121 RKMGVCVNNARIVTPNVCLTSTIRCHGISTSITYDKTS-FSDTLPAKQSSAETIVQRNEK 180
           RKMGVCVNNARI+TPNVCLTS+IRCHGIS++I+YDKTS FSDTLPAKQSSA+ IVQRNE 
Sbjct: 121 RKMGVCVNNARIITPNVCLTSSIRCHGISSAISYDKTSAFSDTLPAKQSSADIIVQRNEM 180

Query: 181 KGAKSLQSAAMKKNRPLH 198
            GAKS +S AMKKNR LH
Sbjct: 181 NGAKSSESGAMKKNRSLH 198

[Close]

BLAST of Clc02G02830 vs. NCBI nr
Match: TYK19330.1 (FAS1 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 316.2 bits (809), Expect = 1.9e-82
Identity = 167/197 (84.77%), Postives = 177/197 (89.85%), Query Frame = 0


Query: 1   MAPWFFVFLFLVAKAQATTINQTDLQVAMDEMRLKSYHGFVILLKILNSSHKTLQNSDIT 60
           M P FFV L LVAKAQA   NQTDLQ AMDEMRLKSYHGFVILLKILN+S+KTLQNSDIT
Sbjct: 1   MTPSFFVLLLLVAKAQAIMANQTDLQAAMDEMRLKSYHGFVILLKILNNSNKTLQNSDIT 60

Query: 61  FFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHFPNGSLVPTSIPNRMISITNC 120
           FFMPTDQELSQA IS D LE+FVLSHSIPT+LLLNNLLHFPNGSLVP+SIPNRMI IT  
Sbjct: 61  FFMPTDQELSQADISLDQLEEFVLSHSIPTSLLLNNLLHFPNGSLVPSSIPNRMIKITKS 120

Query: 121 RKMGVCVNNARIVTPNVCLTSTIRCHGISTSITYDKTSFSDTLPAKQSSAETIVQRNEKK 180
           RKMGVCVN ARIVTPNVCLTS+IRCHGIST+I+YDKTSFS+TLPAKQ+ AETIVQRNEKK
Sbjct: 121 RKMGVCVNEARIVTPNVCLTSSIRCHGISTAISYDKTSFSETLPAKQNLAETIVQRNEKK 180

Query: 181 GAKSLQSAAMKKNRPLH 198
           GAKSL SA  KKNR LH
Sbjct: 181 GAKSLPSATTKKNRSLH 197

[Close]

BLAST of Clc02G02830 vs. NCBI nr
Match: XP_022989473.1 (uncharacterized protein LOC111486521 [Cucurbita maxima])

HSP 1 Score: 315.5 bits (807), Expect = 3.3e-82
Identity = 164/197 (83.25%), Postives = 176/197 (89.34%), Query Frame = 0


Query: 1   MAPWFFVFLFLVAKAQATTINQTDLQVAMDEMRLKSYHGFVILLKILNSSHKTLQNSDIT 60
           MA WFFV LFLV  A+ATT NQTDL+ AMD+MR+KSYHGFVILLKILNSSHK L NSDIT
Sbjct: 1   MASWFFVLLFLVGNARATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDIT 60

Query: 61  FFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHFPNGSLVPTSIPNRMISITNC 120
           FFMP DQELS+AAISPD +E+FVLSHSIPT L+LNNLLHFPNGSLVP+SIPNRMISITNC
Sbjct: 61  FFMPADQELSRAAISPDRIEEFVLSHSIPTRLVLNNLLHFPNGSLVPSSIPNRMISITNC 120

Query: 121 RKMGVCVNNARIVTPNVCLTSTIRCHGISTSITYDKTSFSDTLPAKQSSAETIVQRNEKK 180
           RKMGVC+NNA+IVTPNVCL S IRCHGIST+I YD TSFSD    KQSSAETIVQRNEKK
Sbjct: 121 RKMGVCMNNAQIVTPNVCLNSAIRCHGISTTIAYDNTSFSD---IKQSSAETIVQRNEKK 180

Query: 181 GAKSLQSAAMKKNRPLH 198
           GAKSLQ AAMKKNR LH
Sbjct: 181 GAKSLQYAAMKKNRLLH 194

[Close]

BLAST of Clc02G02830 vs. ExPASy TrEMBL
Match: A0A0A0K7Q8 (FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G272100 PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 5.7e-88
Identity = 172/197 (87.31%), Postives = 182/197 (92.39%), Query Frame = 0


Query: 1   MAPWFFVFLFLVAKAQATTINQTDLQVAMDEMRLKSYHGFVILLKILNSSHKTLQNSDIT 60
           MAPWFFV LFLVAKA AT  NQ DLQ AMDEMRLKSYHGF ILLKILNS+ KTLQNS+IT
Sbjct: 1   MAPWFFVLLFLVAKAHATMTNQIDLQAAMDEMRLKSYHGFAILLKILNSTTKTLQNSNIT 60

Query: 61  FFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHFPNGSLVPTSIPNRMISITNC 120
           FFMPTDQELSQA ISPD LE+FVLSHSIPTALLLNNLLHFPNG+LVP+SIPNRMI ITNC
Sbjct: 61  FFMPTDQELSQADISPDRLEEFVLSHSIPTALLLNNLLHFPNGTLVPSSIPNRMIRITNC 120

Query: 121 RKMGVCVNNARIVTPNVCLTSTIRCHGISTSITYDKTSFSDTLPAKQSSAETIVQRNEKK 180
           RKMGVC+NNARI+TPNVCLTS+IRCHGIST+I+YDKTSFSDTLPAKQSSAE IVQRNE K
Sbjct: 121 RKMGVCLNNARIITPNVCLTSSIRCHGISTAISYDKTSFSDTLPAKQSSAEIIVQRNEIK 180

Query: 181 GAKSLQSAAMKKNRPLH 198
           GAKSLQS AMKKNR LH
Sbjct: 181 GAKSLQSGAMKKNRSLH 197

[Close]

BLAST of Clc02G02830 vs. ExPASy TrEMBL
Match: A0A5D3E7C1 (Fasciclin-like arabinogalactan protein 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold172G00700 PE=3 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.5e-83
Identity = 165/198 (83.33%), Postives = 179/198 (90.40%), Query Frame = 0


Query: 1   MAPWFFVFLFLVAKAQATTINQTDLQVAMDEMRLKSYHGFVILLKILNSSHKTLQNSDIT 60
           MAPWFFV LFL+ KA AT  NQ DLQ AMD+MRLKSYHGF ILLKILNS+ KTLQNS+IT
Sbjct: 1   MAPWFFVLLFLMTKAHATMTNQIDLQAAMDQMRLKSYHGFTILLKILNSTTKTLQNSNIT 60

Query: 61  FFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHFPNGSLVPTSIPNRMISITNC 120
           FFMPTDQELSQA ISP+ L+DFVLSHSIPTALLLNNLLHFPNGSLVP+SIPNRMI ITNC
Sbjct: 61  FFMPTDQELSQADISPNRLKDFVLSHSIPTALLLNNLLHFPNGSLVPSSIPNRMIRITNC 120

Query: 121 RKMGVCVNNARIVTPNVCLTSTIRCHGISTSITYDKTS-FSDTLPAKQSSAETIVQRNEK 180
           RKMGVCVNNARI+TPNVCLTS+IRCHGIS++I+YDKTS FSDTLPAKQSSA+ IVQRNE 
Sbjct: 121 RKMGVCVNNARIITPNVCLTSSIRCHGISSAISYDKTSAFSDTLPAKQSSADIIVQRNEM 180

Query: 181 KGAKSLQSAAMKKNRPLH 198
            GAKS +S AMKKNR LH
Sbjct: 181 NGAKSSESGAMKKNRSLH 198

[Close]

BLAST of Clc02G02830 vs. ExPASy TrEMBL
Match: A0A1S3CGC4 (uncharacterized protein LOC107990279 OS=Cucumis melo OX=3656 GN=LOC107990279 PE=3 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.5e-83
Identity = 165/198 (83.33%), Postives = 179/198 (90.40%), Query Frame = 0


Query: 1   MAPWFFVFLFLVAKAQATTINQTDLQVAMDEMRLKSYHGFVILLKILNSSHKTLQNSDIT 60
           MAPWFFV LFL+ KA AT  NQ DLQ AMD+MRLKSYHGF ILLKILNS+ KTLQNS+IT
Sbjct: 1   MAPWFFVLLFLMTKAHATMTNQIDLQAAMDQMRLKSYHGFTILLKILNSTTKTLQNSNIT 60

Query: 61  FFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHFPNGSLVPTSIPNRMISITNC 120
           FFMPTDQELSQA ISP+ L+DFVLSHSIPTALLLNNLLHFPNGSLVP+SIPNRMI ITNC
Sbjct: 61  FFMPTDQELSQADISPNRLKDFVLSHSIPTALLLNNLLHFPNGSLVPSSIPNRMIRITNC 120

Query: 121 RKMGVCVNNARIVTPNVCLTSTIRCHGISTSITYDKTS-FSDTLPAKQSSAETIVQRNEK 180
           RKMGVCVNNARI+TPNVCLTS+IRCHGIS++I+YDKTS FSDTLPAKQSSA+ IVQRNE 
Sbjct: 121 RKMGVCVNNARIITPNVCLTSSIRCHGISSAISYDKTSAFSDTLPAKQSSADIIVQRNEM 180

Query: 181 KGAKSLQSAAMKKNRPLH 198
            GAKS +S AMKKNR LH
Sbjct: 181 NGAKSSESGAMKKNRSLH 198

[Close]

BLAST of Clc02G02830 vs. ExPASy TrEMBL
Match: A0A5D3D7B0 (FAS1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold295G00510 PE=3 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 9.4e-83
Identity = 167/197 (84.77%), Postives = 177/197 (89.85%), Query Frame = 0


Query: 1   MAPWFFVFLFLVAKAQATTINQTDLQVAMDEMRLKSYHGFVILLKILNSSHKTLQNSDIT 60
           M P FFV L LVAKAQA   NQTDLQ AMDEMRLKSYHGFVILLKILN+S+KTLQNSDIT
Sbjct: 1   MTPSFFVLLLLVAKAQAIMANQTDLQAAMDEMRLKSYHGFVILLKILNNSNKTLQNSDIT 60

Query: 61  FFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHFPNGSLVPTSIPNRMISITNC 120
           FFMPTDQELSQA IS D LE+FVLSHSIPT+LLLNNLLHFPNGSLVP+SIPNRMI IT  
Sbjct: 61  FFMPTDQELSQADISLDQLEEFVLSHSIPTSLLLNNLLHFPNGSLVPSSIPNRMIKITKS 120

Query: 121 RKMGVCVNNARIVTPNVCLTSTIRCHGISTSITYDKTSFSDTLPAKQSSAETIVQRNEKK 180
           RKMGVCVN ARIVTPNVCLTS+IRCHGIST+I+YDKTSFS+TLPAKQ+ AETIVQRNEKK
Sbjct: 121 RKMGVCVNEARIVTPNVCLTSSIRCHGISTAISYDKTSFSETLPAKQNLAETIVQRNEKK 180

Query: 181 GAKSLQSAAMKKNRPLH 198
           GAKSL SA  KKNR LH
Sbjct: 181 GAKSLPSATTKKNRSLH 197

[Close]

BLAST of Clc02G02830 vs. ExPASy TrEMBL
Match: A0A0A0K6H7 (FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G033340 PE=3 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 9.4e-83
Identity = 166/197 (84.26%), Postives = 174/197 (88.32%), Query Frame = 0


Query: 1   MAPWFFVFLFLVAKAQATTINQTDLQVAMDEMRLKSYHGFVILLKILNSSHKTLQNSDIT 60
           M PWFFV LFLVAKAQAT  NQTDLQ AMDEMRLKSYHGFVILLKILN+S+KTLQNSDIT
Sbjct: 1   MTPWFFVLLFLVAKAQATMTNQTDLQAAMDEMRLKSYHGFVILLKILNNSNKTLQNSDIT 60

Query: 61  FFMPTDQELSQAAISPDGLEDFVLSHSIPTALLLNNLLHFPNGSLVPTSIPNRMISITNC 120
           FFMPTDQELSQA IS D LE+FVL HSIPT LLLNNL HFPNGSLVP+SIPNRMI IT  
Sbjct: 61  FFMPTDQELSQADISLDQLEEFVLRHSIPTTLLLNNLSHFPNGSLVPSSIPNRMIKITKS 120

Query: 121 RKMGVCVNNARIVTPNVCLTSTIRCHGISTSITYDKTSFSDTLPAKQSSAETIVQRNEKK 180
           R MGVCVN+A IVTPNVCLTS+IRCHGIST+I+YDK SFSDTLPAKQS AE IVQRNEKK
Sbjct: 121 RMMGVCVNDALIVTPNVCLTSSIRCHGISTAISYDKNSFSDTLPAKQSLAEPIVQRNEKK 180

Query: 181 GAKSLQSAAMKKNRPLH 198
           GAKSL S  MKKNR LH
Sbjct: 181 GAKSLPSTTMKKNRSLH 197

[Close]

BLAST of Clc02G02830 vs. TAIR 10
Match: AT5G26730.1 (Fasciclin-like arabinogalactan family protein )

HSP 1 Score: 147.9 bits (372), Expect = 8.6e-36
Identity = 75/140 (53.57%), Postives = 102/140 (72.86%), Query Frame = 0


Query: 21  NQTDLQVAMDEMRLKSYHGFVILLKILNSSHKTLQNSDITFFMPTDQELSQAAISPDGLE 80
           NQTDL  AM +MR +SY+GFVILL+ LN ++   +N+DITF MP+D ++S A I+P+ LE
Sbjct: 114 NQTDLISAMTDMRRQSYNGFVILLRFLNDTN-YFRNTDITFLMPSDNDISHADITPESLE 173

Query: 81  DFVLSHSIPTALLLNNLLHFPNGSLVPTSIPNRMISITNCRKMGVCVNNARIVTPNVCLT 140
            F+L H+IP  L++N++LHFPN +LVP S  +RM +IT     G+ VNNARIVTPNVC  
Sbjct: 174 TFILKHTIPAWLMINHMLHFPNRTLVPCSFSDRMFTITKSGGSGIYVNNARIVTPNVCQN 233

Query: 141 STIRCHGISTSITYDKTSFS 161
           S I CHGIS  I++++   S
Sbjct: 234 SRISCHGISDVISFNQNYVS 252

[Close]

BLAST of Clc02G02830 vs. TAIR 10
Match: AT5G16920.1 (Fasciclin-like arabinogalactan family protein )

HSP 1 Score: 94.4 bits (233), Expect = 1.1e-19
Identity = 51/144 (35.42%), Postives = 87/144 (60.42%), Query Frame = 0


Query: 21  NQTDLQVAMDEMRLKSYHGFVILLKILNSSHKTLQNSDITFFMPTDQELSQAAI--SPDG 80
           N  +L +A++EM   +Y  FV+L+ +L S +     +++TF MP D+ LS + I    D 
Sbjct: 32  NNHELSIAIEEMEKANYFSFVMLINMLPSVNPRFL-ANVTFLMPKDKTLSTSNIINQQDS 91

Query: 81  LEDFVLSHSIPTALLLNNLLHFPNGSLVPTSIPNRMISITNCRKMGVCVNNARIVTPNVC 140
           + +F+L HSIP++LL  +L   PNGS+VP+S+P+  + I+N  +    +NN +I++ N+C
Sbjct: 92  VTEFLLRHSIPSSLLFEHLNLIPNGSIVPSSLPHYTLEISNGGRSNYFLNNVKIISRNIC 151

Query: 141 LTSTIRCHGISTSITYDKTSFSDT 163
              +I+CHGI   +    T   D+
Sbjct: 152 SLGSIKCHGIDGILQSPSTVDDDS 174

The following BLAST results are available for this feature:

BLAST of Clc02G02830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887869.1	3.1e-96	94.42	uncharacterized protein LOC120077861 [Benincasa hispida]	[more]
XP_004149424.1	1.2e-87	87.31	uncharacterized protein LOC101220860 [Cucumis sativus]	[more]
XP_008461950.1	5.1e-83	83.33	PREDICTED: uncharacterized protein LOC107990279 [Cucumis melo] >KAA0048757.1 fas...	[more]
TYK19330.1	1.9e-82	84.77	FAS1 domain-containing protein [Cucumis melo var. makuwa]	[more]
XP_022989473.1	3.3e-82	83.25	uncharacterized protein LOC111486521 [Cucurbita maxima]	[more]

BLAST of Clc02G02830 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc02G02830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7Q8	5.7e-88	87.31	FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G272100 PE=3 S...	[more]
A0A5D3E7C1	2.5e-83	83.33	Fasciclin-like arabinogalactan protein 19 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3CGC4	2.5e-83	83.33	uncharacterized protein LOC107990279 OS=Cucumis melo OX=3656 GN=LOC107990279 PE=...	[more]
A0A5D3D7B0	9.4e-83	84.77	FAS1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A0A0K6H7	9.4e-83	84.26	FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G033340 PE=3 S...	[more]

BLAST of Clc02G02830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26730.1	8.6e-36	53.57	Fasciclin-like arabinogalactan family protein	[more]
AT5G16920.1	1.1e-19	35.42	Fasciclin-like arabinogalactan family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000782	FAS1 domain	SMART	SM00554	fasc_3	coord: 60..155 e-value: 2.9E-4 score: 30.2
IPR000782	FAS1 domain	PFAM	PF02469	Fasciclin	coord: 48..141 e-value: 1.3E-4 score: 22.2
IPR036378	FAS1 domain superfamily	GENE3D	2.30.180.10	FAS1 domain	coord: 12..153 e-value: 4.0E-8 score: 35.6
IPR036378	FAS1 domain superfamily	SUPERFAMILY	82153	FAS1 domain	coord: 40..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..197
None	No IPR available	PANTHER	PTHR36069:SF4	FASCICLIN-LIKE ARABINOGALACTAN FAMILY PROTEIN	coord: 1..180
None	No IPR available	PANTHER	PTHR36069	EXPRESSED PROTEIN-RELATED	coord: 1..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G02830.2	Clc02G02830.2	mRNA