Clc02G02470 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G02470
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	DDB1- and CUL4-associated factor 13
Location	ClcChr02: 2265893 .. 2270590 (+)
RNA-Seq Expression	Clc02G02470
Synteny	Clc02G02470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGTAAATTTGGCCTATCGGTGCAGGGTTTAACTTCTTCTTCAACATCTTCTCTCCCTCCCTAGGGTTTTACTCAACAATGAAGGTCAAGGTGATATCCCGCTCCACAGATGAATTCACTCGAGAACGAAGCCAAGATCTCCAGGTGATTAACCGGCGTGGTTTTTTGTTTATTTATTTATTATTATTATTATTATTATTATTATTATTTTTTATTGAATTTCTCTCTTGCTTCAAGAATTAACGTTGTATTGCTTCCATTAGAGGGTTTTTCGGAACTTCGACCCCAGTCTCCGTACGCAAGAGAAGGCGGTTGAGTATGTCCGTGCTCTTAATGCCGCGAAATTGGATAAGGTAATGTTTTGGTTTGAAACTATTGTTTCAGGCTGCTGAGTCGATGGGAAATTTCGAAAAATTAGTGAAAATTCTTATGTCTTCCATGTTTTAGATGTTCGCAAAACCATTTATAGGAGCAATGGATGGGCATTTGGACGCCGTTTCATGTATGGCAAAGAATCCTAATCACTTGAAAGGGATATTTTCCGGTTCGATGGATGGAGGTAATTTACTCAATGCTTCAGCTGCTGGGTTAAAATTGTTAGTTTTTTCTTCTTCAGTATTTCTTCCTCTGTTTTTTGTGAAGTGGACAGCAGTTAGGTAGGGAGTTTTTGGAAAATTTACTCCTTTGTGTGTAGGTGTGTTTAATTCTTGTTGCATTCGAACTATGATATTAATTTGTCATGCATTATAGTTGTTTTATATCTCCATCAGTAATTGATTTTTATGTCTACAGATATTCGCCTGTGGGATATTGCAAACAGGTAAATTGATGTCTTCCAACAACCTTTCGATCTATGCAGTATTGTTTTCGTACTGGTCAAATGCTTGACACGAACTATGCTGCAATTAAAAGTCCACAAATAAATGCTAACCCACATACATTATAGGAGAACCATTTGTCAGTTTCCTGGACATCAAGGTGCTGTTCGAGGCTTGACTGCATCTACGGATGGACGCATCTTGATATCATGTGGGACAGATTGCACGTAAGGCACCATTTTATAGATATACTATTCTATGCATTGTAGAATGTTAAGACTTATAAATTTCTACTTGGGACTAATTTTTCCTTGTTTGTTGTTTTTAGTGTCAGGCTATGGAATGTCCCAGTTCCCACTCTGAATTCATATGAGACTTCAAATAATTCCTCAGAGGTTTGTCCTTGAATTACCTGTGTGTTGTAATGCCTGAATTATCTGTATTATTCCCAACTAACCTTTTGAAAACCATGCATTCAGCCTCTGGCAGTTTATGTCTGGAAGAATGCTTTCTGGTAAGATACTAATTTTAGACAATGGTATATCCCTTTCTTTTGATTCTTCTTTTTAAAGTTCTCTTTGGATTCTGAGCCCTTAGTTCCTGATTTATAGGGCTGTTGATCATCAGTGGGATGGAAATCTTTTTGCTACAGCTGGTGCACAATTAGATATCTGGGATCACAACAGGTATTCATCACCATTCATTTCACTCAGCACTTTCTTTTCCTTATTATATATTGAAGATATTATTATTATTATTATTTTTTTTTTGTAGGTCTCAACCAGTGAGCAGTTATGAGTGGGGAACAGACTCAGTTATATCTGTCCGTTTTAATCCTGGAGAACCCAATGTCCTGGCAACATCAGCTAGGTATGCATGACCTCGGGTGCTAGTTTACTTGCTAATGGTCCATGCATACCAATTTGAGTATAGCTTGTTGGATAAGGCTCCAACTGTATCTCAAAGGTTGATGGGTGGATCTTTGAACCTTGCAATTTGAACTAAAACCAAAAAATAATGGTCGATGCATGTTATGCATTTTTCAGTTGTACAAAATTTGAGTTAAGGATGACTCCAGTTTTGTGGTGATTAGATATATGTAATTCATCTTCGTATATGAAGTAGTGTGGATTTGAACTAGCTCTATCAAATAAATAAATGAATGAATGAAAAGGACGGATATGGAACTAGTAATGGTATTTAATCCAGTAGAGTTTTTGCTGATCACTTCATTTTCAACTTCATATGATGGGAGTATTTTTAACCCTCTATGATGTGTTTTTTCCTTGTTTTGTAGTGATCGAAGTATTGCATTGTATGATTTGCGCATGTCATCCCCAGCAAGGAAAATAATTATGAGGGTATGATTGTGGCAGTGAGTCAAAAGAGTTCCTTATTTGAAATGTTTTATTTTGTTTCATGTATTCTTATGGGTATCTTTCTTATGACAGACAAAGACAAATTCTATTTGTTGGAATCCAAGGGAGCCAATGAACTTCACTGCTGTAAGCACACGAATGGAACTTTCAGATTTCATATTTCTTGACGTTGTCTTAAGCTTTTTGGCTTATATTGCTTTTATCATAATGCAGTCAACATGATAATCAAATACTTCGTTGTTCTAATTTGTATAAGAGTTTAGAATTAGAATCCTCATTAAATTTTATAAGTAATCTAACTATTTATGTTCTCCTCATTCTTCTAACCATCTAGTATTTTGCAATTGTTCTTTGTTCCCTTCAGAATGATTCCTCGTACTTTATGCTTTGCAGGCAAATGAAGACTGCAACTGTTATAGTTATGATTCTAGGAAACTCGATGAGGCGAAATGTGTGCACAGAGATCATGTCTCTGCAGTGTATGAAATAAACTTATGATTTTGGTTTATAGGAAGTAAATAGTGCCACTCCTTATCTTCAATCTTTAGTAAAACTTGTGAAGATTCATCTCTTTCTTTTCAGTATGGATATTGATTTTTCACCAAGTGGTCGAGAATTTGTTACTGGCTCATATGATAGAACAGTGAGTTCTAACCCCAGGTTATGTTCAGCATTTTGTATCTTGTTTTTTCGAGATATGTTCTGAATTTATCATGTAATTAATTTTGCAGATAAGAATCTTTCCGTATAATGGGGGTCACAGCCGTGAGATTTATCATACCAAAAGAATGCAAAGGTTTGCTTTATTATTCTAGCCTTTGATCCATGTTCATCATTTGTTTAGTTTCAGTACATTTCAAGTGATTAGTGAATGCTCAAATGCGAATAGTGACTGTTTCTTTTTTGCTGATGTTACTGCCGCCTTTTGGGTTTTTGTAGGGTTTTCTGCGTCAGGTTCAGCTGTGATGCAAGTTATGTGATATCAGGGAGTGATGACACCAACCTTCGGCTTTGGAAGGCCAAGGCATCTGAACAATTAGGAGTTGTAAGAATCCTCTCTCTCTCTTTATTTTTGCTATGTAGTGCACTTGTTCGATCTGGATACTTAATATGTTAATGTTTATATCCCTTTTTTAAATTTACAAATTCTCTTTTGATAGCATAAACTTCCTTGGTATATATTCCAAAATATAATTCTTTTCTATTTTCAGAACTCTTTGATCAACTTTATTTTGTACAAGCTTACATGAAAATTACAAGGCCTAGTTAGGTGGGTAATGATGCTAGTCTAAAGTGATAGTATTTAATAGTTCCTGTCGGTGTAATGGTTAATATTTGTAAGAACAGTTGATTGGAGCCTTTGTATTAACGGGCTTTAATTTATGATAGGAAAGCTATTAGGAAGTAATTAGAGTATTAAGTGCATATCAGCAAGTCGTTAAGGAGTTTGTTAGGGAGGCTTGGTTATAGTGGATGGGGAAGGAGAAAGCGGAGCAATATTTTGATGAGTAATTAAGTGCTTTTGAGTGATATCAAGATTGGGAGGGTTTGGATGTTTATCTTGTTGTTTGGTTACTTTTATCTTTCAATTCATTTGGGATCTATCAATTTGCTTCTAAATTAATGTTTGCTGCAGCTTCTTCCGAGGGAGAAAAGAAAGCATGAATATCAAGAGGCTGTTAAGAATCGTTATAAACACCTTCCTGAGGTTAAGCGTATTGTGAGGTTAGTCTTGTGTCCGACTTTAATGTTCCGCCAGTCTGCATCTTATAATTTCATGACGCCAAGTTGGGATATGTGTGTGTATATACACCACACGGATTTAATTAGTTTCGCTTTTACTATTGGAAAGACATTCCTCATCTCCCTCTCTTGCCATTTGGTGCTTATTATAAGTGCCATTTCCTATACCGTAACAAGAAGGAAAAGTATTGGAAAGGGATTTTTAAACTTCGATGTCTGGGTTTGTCACTGCAGGCATAGACATTTACCGAAACCAATATTCAAAGCCGCTGCACTCCGGCGCACTATTATGGATGCCGAGAGAAGGAAGGAAGAGAGGAGGAAAGCTCACAGTGCTCCTGGGAGCATTTCAACTGTACCACTCCGTAGGAGAAGAATTATCAAAGAAGTTGAGTAAACTAACTTCGAAACAAGAGGATGAAAGAGAGACTTTGAGGATGTTATGTTCAACTCCTGGGATGTTCCCGGCTGCTGCTTAAAACACTTTGAGGCACCAATAGCTCTGGATATCTTTCATAGATCCCATCTCATGACTACTCGACTCACAATTGAGTTGAACGAGGAAGAATCAAAATTTTGCGGTGTTGTACAAATTCTTGATTGTCGAGATAAATTTGTTAAAGCTTATGATATTTTAGTTCAAATGTTCTTTAACTATTTATGGGTCAGTTTCAAATTCTTAAAGATCAATACAAATCAGCACATTGTGTTATTGTGTAACATTTTAGTAAAAATGATATCAGAGCAACTTTTAATTA

mRNA sequence

TCGTAAATTTGGCCTATCGGTGCAGGGTTTAACTTCTTCTTCAACATCTTCTCTCCCTCCCTAGGGTTTTACTCAACAATGAAGGTCAAGGTGATATCCCGCTCCACAGATGAATTCACTCGAGAACGAAGCCAAGATCTCCAGAGGGTTTTTCGGAACTTCGACCCCAGTCTCCGTACGCAAGAGAAGGCGGTTGAGTATGTCCGTGCTCTTAATGCCGCGAAATTGGATAAGATGTTCGCAAAACCATTTATAGGAGCAATGGATGGGCATTTGGACGCCGTTTCATGTATGGCAAAGAATCCTAATCACTTGAAAGGGATATTTTCCGGTTCGATGGATGGAGATATTCGCCTGTGGGATATTGCAAACAGGAGAACCATTTGTCAGTTTCCTGGACATCAAGGTGCTGTTCGAGGCTTGACTGCATCTACGGATGGACGCATCTTGATATCATGTGGGACAGATTGCACGCTATGGAATGTCCCAGTTCCCACTCTGAATTCATATGAGACTTCAAATAATTCCTCAGAGCCTCTGGCAGTTTATGTCTGGAAGAATGCTTTCTGGGCTGTTGATCATCAGTGGGATGGAAATCTTTTTGCTACAGCTGGTGCACAATTAGATATCTGGGATCACAACAGGTCTCAACCAGTGAGCAGTTATGAGTGGGGAACAGACTCAGTTATATCTGTCCGTTTTAATCCTGGAGAACCCAATGTCCTGGCAACATCAGCTAGTGATCGAAGTATTGCATTGTATGATTTGCGCATGTCATCCCCAGCAAGGAAAATAATTATGAGGACAAAGACAAATTCTATTTGTTGGAATCCAAGGGAGCCAATGAACTTCACTGCTGCAAATGAAGACTGCAACTGTTATAGTTATGATTCTAGGAAACTCGATGAGGCGAAATGTGTGCACAGAGATCATGTCTCTGCAGTTATGGATATTGATTTTTCACCAAGTGGTCGAGAATTTGTTACTGGCTCATATGATAGAACAATAAGAATCTTTCCGTATAATGGGGGTCACAGCCGTGAGATTTATCATACCAAAAGAATGCAAAGGGTTTTCTGCGTCAGGTTCAGCTGTGATGCAAGTTATGTGATATCAGGGAGTGATGACACCAACCTTCGGCTTTGGAAGGCCAAGGCATCTGAACAATTAGGAGTTCTTCTTCCGAGGGAGAAAAGAAAGCATGAATATCAAGAGGCTGTTAAGAATCGTTATAAACACCTTCCTGAGGTTAAGCGTATTGTGAGGTTAGTCTTGTGTCCGACTTTAATGTTCCGCCAGTCTGCATCTTATAATTTCATGACGCCAAGCATAGACATTTACCGAAACCAATATTCAAAGCCGCTGCACTCCGGCGCACTATTATGGATGCCGAGAGAAGGAAGGAAGAGAGGAGGAAAGCTCACAGTGCTCCTGGGAGCATTTCAACTGTACCACTCCGTAGGAGAAGAATTATCAAAGAAGTTGAGTAAACTAACTTCGAAACAAGAGGATGAAAGAGAGACTTTGAGGATGTTATGTTCAACTCCTGGGATGTTCCCGGCTGCTGCTTAAAACACTTTGAGGCACCAATAGCTCTGGATATCTTTCATAGATCCCATCTCATGACTACTCGACTCACAATTGAGTTGAACGAGGAAGAATCAAAATTTTGCGGTGTTGTACAAATTCTTGATTGTCGAGATAAATTTGTTAAAGCTTATGATATTTTAGTTCAAATGTTCTTTAACTATTTATGGGTCAGTTTCAAATTCTTAAAGATCAATACAAATCAGCACATTGTGTTATTGTGTAACATTTTAGTAAAAATGATATCAGAGCAACTTTTAATTA

Coding sequence (CDS)

ATGAAGGTCAAGGTGATATCCCGCTCCACAGATGAATTCACTCGAGAACGAAGCCAAGATCTCCAGAGGGTTTTTCGGAACTTCGACCCCAGTCTCCGTACGCAAGAGAAGGCGGTTGAGTATGTCCGTGCTCTTAATGCCGCGAAATTGGATAAGATGTTCGCAAAACCATTTATAGGAGCAATGGATGGGCATTTGGACGCCGTTTCATGTATGGCAAAGAATCCTAATCACTTGAAAGGGATATTTTCCGGTTCGATGGATGGAGATATTCGCCTGTGGGATATTGCAAACAGGAGAACCATTTGTCAGTTTCCTGGACATCAAGGTGCTGTTCGAGGCTTGACTGCATCTACGGATGGACGCATCTTGATATCATGTGGGACAGATTGCACGCTATGGAATGTCCCAGTTCCCACTCTGAATTCATATGAGACTTCAAATAATTCCTCAGAGCCTCTGGCAGTTTATGTCTGGAAGAATGCTTTCTGGGCTGTTGATCATCAGTGGGATGGAAATCTTTTTGCTACAGCTGGTGCACAATTAGATATCTGGGATCACAACAGGTCTCAACCAGTGAGCAGTTATGAGTGGGGAACAGACTCAGTTATATCTGTCCGTTTTAATCCTGGAGAACCCAATGTCCTGGCAACATCAGCTAGTGATCGAAGTATTGCATTGTATGATTTGCGCATGTCATCCCCAGCAAGGAAAATAATTATGAGGACAAAGACAAATTCTATTTGTTGGAATCCAAGGGAGCCAATGAACTTCACTGCTGCAAATGAAGACTGCAACTGTTATAGTTATGATTCTAGGAAACTCGATGAGGCGAAATGTGTGCACAGAGATCATGTCTCTGCAGTTATGGATATTGATTTTTCACCAAGTGGTCGAGAATTTGTTACTGGCTCATATGATAGAACAATAAGAATCTTTCCGTATAATGGGGGTCACAGCCGTGAGATTTATCATACCAAAAGAATGCAAAGGGTTTTCTGCGTCAGGTTCAGCTGTGATGCAAGTTATGTGATATCAGGGAGTGATGACACCAACCTTCGGCTTTGGAAGGCCAAGGCATCTGAACAATTAGGAGTTCTTCTTCCGAGGGAGAAAAGAAAGCATGAATATCAAGAGGCTGTTAAGAATCGTTATAAACACCTTCCTGAGGTTAAGCGTATTGTGAGGTTAGTCTTGTGTCCGACTTTAATGTTCCGCCAGTCTGCATCTTATAATTTCATGACGCCAAGCATAGACATTTACCGAAACCAATATTCAAAGCCGCTGCACTCCGGCGCACTATTATGGATGCCGAGAGAAGGAAGGAAGAGAGGAGGAAAGCTCACAGTGCTCCTGGGAGCATTTCAACTGTACCACTCCGTAGGAGAAGAATTATCAAAGAAGTTGAGTAAACTAACTTCGAAACAAGAGGATGAAAGAGAGACTTTGAGGATGTTATGTTCAACTCCTGGGATGTTCCCGGCTGCTGCTTAA

Protein sequence

MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRTQEKAVEYVRALNAAKLDKMFAKPFIGAMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTICQFPGHQGAVRGLTASTDGRILISCGTDCTLWNVPVPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATAGAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARKIIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSGREFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKAKASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRLVLCPTLMFRQSASYNFMTPSIDIYRNQYSKPLHSGALLWMPREGRKRGGKLTVLLGAFQLYHSVGEELSKKLSKLTSKQEDERETLRMLCSTPGMFPAAA

Homology

[Close]

BLAST of Clc02G02470 vs. NCBI nr
Match: XP_038887278.1 (DDB1- and CUL4-associated factor 13 [Benincasa hispida])

HSP 1 Score: 815.5 bits (2105), Expect = 2.6e-232
Identity = 394/411 (95.86%), Postives = 401/411 (97.57%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRTQEKAVEYVRALNAAKLDKMFAKPFIG 60
           MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRTQEKAVEYVRALNAAKLDKMFAKPFIG
Sbjct: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRTQEKAVEYVRALNAAKLDKMFAKPFIG 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTICQFPGHQGAVRGLTASTD 120
           AMDGH+DAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTICQFPGHQGAVRGLTASTD
Sbjct: 61  AMDGHMDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTICQFPGHQGAVRGLTASTD 120

Query: 121 GRILISCGTDCT--LWNVPVPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180
           GRILISCGTDCT  LWNVP+PTLNSYETS NSSEPLAVYVWKNAFWA+DHQWDGNLFATA
Sbjct: 121 GRILISCGTDCTVRLWNVPIPTLNSYETSTNSSEPLAVYVWKNAFWAIDHQWDGNLFATA 180

Query: 181 GAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARK 240
           GAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARK
Sbjct: 181 GAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARK 240

Query: 241 IIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG 300
           +IMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG
Sbjct: 241 VIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG 300

Query: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360
           REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA
Sbjct: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360

Query: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRLVLCPTLMFRQSA 410
           KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVR    P  +F+ +A
Sbjct: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAA 411

[Close]

BLAST of Clc02G02470 vs. NCBI nr
Match: XP_004144522.1 (DDB1- and CUL4-associated factor 13 [Cucumis sativus] >KGN43468.1 hypothetical protein Csa_020569 [Cucumis sativus])

HSP 1 Score: 809.3 bits (2089), Expect = 1.9e-230
Identity = 391/411 (95.13%), Postives = 400/411 (97.32%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRTQEKAVEYVRALNAAKLDKMFAKPFIG 60
           MKVKVISRSTDEFTRERS DLQRVFRNFDPSLRTQEKAVEYVRA+NAAKLDKMFAKPFIG
Sbjct: 1   MKVKVISRSTDEFTRERSHDLQRVFRNFDPSLRTQEKAVEYVRAVNAAKLDKMFAKPFIG 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTICQFPGHQGAVRGLTASTD 120
           AMDGH+D+VSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRT+ QFPGHQGAVRGLTASTD
Sbjct: 61  AMDGHMDSVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVYQFPGHQGAVRGLTASTD 120

Query: 121 GRILISCGTDCT--LWNVPVPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180
           GRILISCGTDCT  LWNVPVPTLNSYETSNNSSEPLAVYVWKNAFWA+DHQWDGNLFATA
Sbjct: 121 GRILISCGTDCTVRLWNVPVPTLNSYETSNNSSEPLAVYVWKNAFWAIDHQWDGNLFATA 180

Query: 181 GAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARK 240
           GAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARK
Sbjct: 181 GAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARK 240

Query: 241 IIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG 300
           +IMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG
Sbjct: 241 VIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG 300

Query: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360
           REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA
Sbjct: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360

Query: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRLVLCPTLMFRQSA 410
           KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVR    P  +F+ +A
Sbjct: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAA 411

[Close]

BLAST of Clc02G02470 vs. NCBI nr
Match: XP_023554471.1 (DDB1- and CUL4-associated factor 13-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 808.5 bits (2087), Expect = 3.2e-230
Identity = 389/411 (94.65%), Postives = 399/411 (97.08%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRTQEKAVEYVRALNAAKLDKMFAKPFIG 60
           MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRTQEKAVEYVRALNAAK+D+MFAKPFIG
Sbjct: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRTQEKAVEYVRALNAAKMDRMFAKPFIG 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTICQFPGHQGAVRGLTASTD 120
           AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRT+CQFPGHQGAVRGLTAS D
Sbjct: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTASAD 120

Query: 121 GRILISCGTDCT--LWNVPVPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180
           GRIL+SCGTDCT  LWNVP+PTLNSYET NNSSEPLAVYVWKNAFWAVDHQWDGNLFATA
Sbjct: 121 GRILVSCGTDCTVRLWNVPIPTLNSYETLNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180

Query: 181 GAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARK 240
           GAQLDIWDHNRSQPVSS+EWGTDSVISVRFNPGEPN+LATSASDRSIALYDLRMSSPARK
Sbjct: 181 GAQLDIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNILATSASDRSIALYDLRMSSPARK 240

Query: 241 IIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG 300
           IIMRTK NSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG
Sbjct: 241 IIMRTKANSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG 300

Query: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360
           REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA
Sbjct: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360

Query: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRLVLCPTLMFRQSA 410
           KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVR    P  +F+ +A
Sbjct: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAA 411

[Close]

BLAST of Clc02G02470 vs. NCBI nr
Match: XP_022969085.1 (DDB1- and CUL4-associated factor 13-like [Cucurbita maxima])

HSP 1 Score: 808.1 bits (2086), Expect = 4.1e-230
Identity = 388/411 (94.40%), Postives = 399/411 (97.08%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRTQEKAVEYVRALNAAKLDKMFAKPFIG 60
           MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRTQEKAVEYVRALNAAK+D+MFAKPFIG
Sbjct: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRTQEKAVEYVRALNAAKMDRMFAKPFIG 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTICQFPGHQGAVRGLTASTD 120
           AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRT+CQFPGHQGAVRGLTAS D
Sbjct: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTASAD 120

Query: 121 GRILISCGTDCT--LWNVPVPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180
           GRIL+SCGTDCT  LWN+P+PTLNSY TSNNSSEPLAVY WKNAFWAVDHQWDGNLFATA
Sbjct: 121 GRILVSCGTDCTVRLWNIPIPTLNSYVTSNNSSEPLAVYAWKNAFWAVDHQWDGNLFATA 180

Query: 181 GAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARK 240
           GAQLDIWDHNRSQPVSS+EWGTDSVISVRFNPGEPN+LATSASDRSIALYDLRMSSPARK
Sbjct: 181 GAQLDIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNILATSASDRSIALYDLRMSSPARK 240

Query: 241 IIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG 300
           IIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG
Sbjct: 241 IIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG 300

Query: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360
           REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA
Sbjct: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360

Query: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRLVLCPTLMFRQSA 410
           KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVR    P  +F+ +A
Sbjct: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAA 411

[Close]

BLAST of Clc02G02470 vs. NCBI nr
Match: TYK21623.1 (DDB1- and CUL4-associated factor 13 [Cucumis melo var. makuwa])

HSP 1 Score: 805.8 bits (2080), Expect = 2.0e-229
Identity = 390/411 (94.89%), Postives = 398/411 (96.84%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRTQEKAVEYVRALNAAKLDKMFAKPFIG 60
           MKVKVISRSTDEFTRERS DLQRVFRNFDPSLR QEKAVEYVRA+NAAKLDKMFAKPFIG
Sbjct: 1   MKVKVISRSTDEFTRERSHDLQRVFRNFDPSLRPQEKAVEYVRAVNAAKLDKMFAKPFIG 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTICQFPGHQGAVRGLTASTD 120
           AMDGH+DAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRT+CQFPGHQGAVRGLTASTD
Sbjct: 61  AMDGHMDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTASTD 120

Query: 121 GRILISCGTDCT--LWNVPVPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180
           GRILISCGTDCT  LWNVP PTLNSYETSNN+SEPLAVYVWKNAFWAVDHQWDGNLFATA
Sbjct: 121 GRILISCGTDCTVRLWNVPFPTLNSYETSNNASEPLAVYVWKNAFWAVDHQWDGNLFATA 180

Query: 181 GAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARK 240
           GAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARK
Sbjct: 181 GAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARK 240

Query: 241 IIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG 300
           +IMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG
Sbjct: 241 VIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG 300

Query: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360
           REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFS DASYVISGSDDTNLRLWKA
Sbjct: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSSDASYVISGSDDTNLRLWKA 360

Query: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRLVLCPTLMFRQSA 410
           KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVR    P  +F+ +A
Sbjct: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAA 411

[Close]

BLAST of Clc02G02470 vs. ExPASy Swiss-Prot
Match: Q5ZLK1 (DDB1- and CUL4-associated factor 13 OS=Gallus gallus OX=9031 GN=DCAF13 PE=2 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 2.2e-117
Identity = 202/433 (46.65%), Postives = 288/433 (66.51%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRTQEKAVEYVRALNAAKLDKMFAKPFIG 60
           M+VKV+SR+ D++ RE   DLQRV RN+DP+L   E A EYVRALNA KL+++FAKPF+ 
Sbjct: 1   MRVKVLSRNPDDYVRETKLDLQRVPRNYDPALHPFEVAREYVRALNATKLERVFAKPFLS 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTICQFPGHQGAVRGLTASTD 120
           ++DGH D V+CMAK+P  L  + SG+ DG++R+W++  R+ I     H+G VRG+ A   
Sbjct: 61  SLDGHRDGVNCMAKHPKSLSTVLSGACDGEVRIWNLTKRQCIRALQAHEGFVRGMCARFC 120

Query: 121 GRILISCGTDCTL--WNVPVPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180
           G    + G D T+  W +  P     E      EP+   + K  +  +DH W   +FAT 
Sbjct: 121 GTSFFTVGDDKTVKQWKMESPGYGEEE------EPIHTILGKTVYTGIDHHWKDAVFATC 180

Query: 181 GAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARK 240
           G Q+DIWD  R+ P+ S  WG DS+ SV+FNP E  +L + ASDR+I LYD+R S+P +K
Sbjct: 181 GQQVDIWDEQRTSPMCSLTWGFDSISSVKFNPIETYLLGSCASDRNIVLYDMRQSTPLKK 240

Query: 241 IIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG 300
           +I+  +TN++CWNP E   FTAANED N Y++D R L     VH DHVSAV+D+D+SP+G
Sbjct: 241 VILNMRTNTLCWNPMEAFIFTAANEDYNLYTFDMRFLTSPVMVHMDHVSAVLDVDYSPTG 300

Query: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360
           +EFV+ S+D+++RIFP + GHSRE+YHTKRMQ V  V+++ D+ Y++ GSD+ N+RLWKA
Sbjct: 301 KEFVSASFDKSVRIFPVDKGHSREVYHTKRMQHVITVKWTSDSRYILCGSDEMNIRLWKA 360

Query: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRLVLCPTLMFRQSASYNFMTPS- 420
            ASE+LGVL PREK    Y + +K +++H P++KRI R    P  ++ Q      M  + 
Sbjct: 361 NASEKLGVLAPREKAAMNYNQKLKEKFQHHPQIKRIARHRHLPKSIYCQIKEQRIMREAR 420

Query: 421 --IDIYRNQYSKP 429
              ++ R ++SKP
Sbjct: 421 RRKELNRRKHSKP 427

[Close]

BLAST of Clc02G02470 vs. ExPASy Swiss-Prot
Match: Q6PAC3 (DDB1- and CUL4-associated factor 13 OS=Mus musculus OX=10090 GN=Dcaf13 PE=2 SV=2)

HSP 1 Score: 420.6 bits (1080), Expect = 2.4e-116
Identity = 200/433 (46.19%), Postives = 286/433 (66.05%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRTQEKAVEYVRALNAAKLDKMFAKPFIG 60
           MKVK++SR+ D + RE   D+QRV RN+DP+L   E   EYVRALNA KL+++FAKPF+ 
Sbjct: 1   MKVKMLSRNPDNYVRETKLDIQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLA 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTICQFPGHQGAVRGLTASTD 120
           ++DGH D V+C+AK+P  L  + SG+ DG++++W++  R+ I     H+G VRG+     
Sbjct: 61  SLDGHRDGVNCLAKHPKSLASVLSGACDGEVKIWNLTKRKCIRTIQAHEGFVRGMCTRFC 120

Query: 121 GRILISCGTDCTL--WNVPVPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180
           G    + G D T+  W +  P     E      EPL   + K  +  +DH W   +FAT 
Sbjct: 121 GTSFFTVGDDKTVKQWKMDGPGYGEEE------EPLYTVLGKTVYTGIDHHWKDPVFATC 180

Query: 181 GAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARK 240
           G Q+DIWD  R+ PV S  WG DS+ SV+FNP E  +L + ASDR+I LYD+R ++P +K
Sbjct: 181 GQQVDIWDEQRTSPVCSMNWGFDSISSVKFNPVETFLLGSCASDRNIVLYDMRQATPLKK 240

Query: 241 IIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG 300
           +I+  +TN+ICWNP E  NFTAANED N Y++D R LD    VH DHVSAV+D+D+SP+G
Sbjct: 241 VILEMRTNTICWNPMEAFNFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTG 300

Query: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360
           +EFV+ S+D++IRIFP +   SRE+YHTKRMQ V CV+++ D+ Y++ GSD+ N+RLWKA
Sbjct: 301 KEFVSASFDKSIRIFPVDKSRSREVYHTKRMQHVMCVKWTSDSKYIMCGSDEMNIRLWKA 360

Query: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRLVLCPTLMFRQSASYNFMTPS- 420
            ASE+LGVL  REK  ++Y + +K ++++ P VKRI R    P  ++ Q      M  + 
Sbjct: 361 NASEKLGVLTSREKAANDYNQKLKEKFQYHPHVKRIARHRHLPKSIYSQIQEQRVMKEAR 420

Query: 421 --IDIYRNQYSKP 429
              ++ R ++SKP
Sbjct: 421 RRKEMNRRKHSKP 427

[Close]

BLAST of Clc02G02470 vs. ExPASy Swiss-Prot
Match: Q7ZYQ6 (DDB1- and CUL4-associated factor 13 OS=Xenopus laevis OX=8355 GN=dcaf13 PE=2 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 1.2e-115
Identity = 202/433 (46.65%), Postives = 280/433 (64.67%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRTQEKAVEYVRALNAAKLDKMFAKPFIG 60
           MKVKV+ R+ D++ RE  +DLQRV RN+DP+L   E + EY RALNA KL+++FAKPFI 
Sbjct: 1   MKVKVLCRNPDDYVRETKRDLQRVPRNYDPALHPFEVSREYTRALNATKLERVFAKPFIA 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTICQFPGHQGAVRGLTASTD 120
           ++DGH D V+C+AK+P  L  + SG+ DG++++W++  R        H G VRGL     
Sbjct: 61  SLDGHRDGVNCIAKHPKSLSTVLSGACDGEVKIWNLTKRECSRTIQAHDGFVRGLCVRFC 120

Query: 121 GRILISCGTDCTL--WNVPVPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180
           G    + G D T+  W +  P            EP+   + K  F  +DH     +FAT 
Sbjct: 121 GTSFFTVGDDKTVKQWAMESPGY------GEKVEPMRTILGKTVFTGIDHHVKDAVFATC 180

Query: 181 GAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARK 240
           G Q+DIWD  RS P+ SY WG DS+ SVRFNP E ++L++  +DRSI LYD R  +P +K
Sbjct: 181 GQQVDIWDEQRSAPMRSYAWGVDSISSVRFNPVETHILSSCGTDRSIVLYDKRKPTPLKK 240

Query: 241 IIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG 300
           II+  +TN++CWNP E   FTAANE+ N Y+YD R +D    VH DHVSAV+D+D+SP+G
Sbjct: 241 IILEMRTNALCWNPMEAFIFTAANENFNLYTYDMRYMDSPVKVHMDHVSAVLDVDYSPTG 300

Query: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360
           +E V+ S+D++IRIFP   GHSRE+YHTKRMQ V CVR+S D  YV+ GSD+ N+R+WKA
Sbjct: 301 KELVSASFDKSIRIFPVQSGHSREVYHTKRMQHVTCVRWSADNKYVLCGSDEMNIRIWKA 360

Query: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRLVLCPTLMFRQSASYNFMTPS- 420
            ASE+LGVL PRE+    Y + +K +++H P++KRI R    P  ++ Q      M  + 
Sbjct: 361 NASEKLGVLSPRERAAQNYNQKLKEKFQHHPQIKRIARHRHLPRSIYSQIKEQQIMREAR 420

Query: 421 --IDIYRNQYSKP 429
              D+ R ++SKP
Sbjct: 421 RKKDVNRRKHSKP 427

[Close]

BLAST of Clc02G02470 vs. ExPASy Swiss-Prot
Match: Q6NVS5 (DDB1- and CUL4-associated factor 13 OS=Xenopus tropicalis OX=8364 GN=dcaf13 PE=2 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 1.2e-115
Identity = 200/433 (46.19%), Postives = 281/433 (64.90%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRTQEKAVEYVRALNAAKLDKMFAKPFIG 60
           MKVKV+ R+ D++ RE  +DLQRV RN+DP+L   E   EY RALNA KL+++FAKPFI 
Sbjct: 1   MKVKVLCRNPDDYVRETKRDLQRVPRNYDPALHPFEVPREYTRALNATKLERVFAKPFIA 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTICQFPGHQGAVRGLTASTD 120
           ++DGH D V+C+AK+P  L  + SG+ DG++++W++  R        H G VRGL     
Sbjct: 61  SLDGHRDGVNCIAKHPKSLSTVLSGACDGEVKIWNLTKRECSRTIQAHDGFVRGLCVRFC 120

Query: 121 GRILISCGTDCTL--WNVPVPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180
           G    + G D T+  W++  P            EP+   + K  F  +DH  +  +FAT 
Sbjct: 121 GTSFFTVGDDKTVKQWSMESPGY------GEKVEPIRTILGKTVFTGIDHHMNDAIFATC 180

Query: 181 GAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARK 240
           G Q+DIWD  RS P+ SY WG DS+ S++FNP E ++L++  +DRSI LYD R  +P +K
Sbjct: 181 GQQVDIWDEQRSAPMRSYAWGVDSISSIKFNPIETHILSSCGTDRSIVLYDKRKPTPLKK 240

Query: 241 IIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG 300
           II+  +TN++CWNP E   FTAANE+ N Y+YD R +D    VH DHVSAV+D+D+SP+G
Sbjct: 241 IILEMRTNTLCWNPMEAFIFTAANENFNLYTYDMRYMDGPVKVHMDHVSAVLDVDYSPTG 300

Query: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360
           +EFV+ S+D++IRIFP   GHSRE+YHTKRMQ V CVR+S D  YV+ GSD+ N+R+WKA
Sbjct: 301 KEFVSASFDKSIRIFPVQSGHSREVYHTKRMQHVTCVRWSADNKYVLCGSDEMNIRIWKA 360

Query: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRLVLCPTLMFRQSASYNFMTPS- 420
            ASE+LG+L PRE+    Y + +K ++ H P++KRI R    P  ++ Q      M  + 
Sbjct: 361 NASEKLGLLSPRERAAQNYNQKLKEKFHHHPQIKRIARHRHLPRSIYSQIKEQQIMREAR 420

Query: 421 --IDIYRNQYSKP 429
              D+ R ++SKP
Sbjct: 421 RKKDVNRRKHSKP 427

[Close]

BLAST of Clc02G02470 vs. ExPASy Swiss-Prot
Match: Q9NV06 (DDB1- and CUL4-associated factor 13 OS=Homo sapiens OX=9606 GN=DCAF13 PE=1 SV=2)

HSP 1 Score: 416.8 bits (1070), Expect = 3.5e-115
Identity = 199/433 (45.96%), Postives = 283/433 (65.36%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRTQEKAVEYVRALNAAKLDKMFAKPFIG 60
           MKVK++SR+ D + RE   DLQRV RN+DP+L   E   EY+RALNA KL+++FAKPF+ 
Sbjct: 1   MKVKMLSRNPDNYVRETKLDLQRVPRNYDPALHPFEVPREYIRALNATKLERVFAKPFLA 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTICQFPGHQGAVRGLTASTD 120
           ++DGH D V+C+AK+P  L  + SG+ DG++R+W++  R  I     H+G VRG+     
Sbjct: 61  SLDGHRDGVNCLAKHPEKLATVLSGACDGEVRIWNLTQRNCIRTIQAHEGFVRGICTRFC 120

Query: 121 GRILISCGTDCTL--WNVPVPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180
           G    + G D T+  W +  P     E      EPL   + K  +  +DH W   +FAT 
Sbjct: 121 GTSFFTVGDDKTVKQWKMDGPGYGDEE------EPLHTILGKTVYTGIDHHWKEAVFATC 180

Query: 181 GAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARK 240
           G Q+DIWD  R+ P+ S  WG DS+ SV+FNP E  +L + ASDR+I LYD+R ++P +K
Sbjct: 181 GQQVDIWDEQRTNPICSMTWGFDSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKK 240

Query: 241 IIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG 300
           +I+  +TN+ICWNP E   FTAANED N Y++D R LD    VH DHVSAV+D+D+SP+G
Sbjct: 241 VILDMRTNTICWNPMEAFIFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTG 300

Query: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360
           +EFV+ S+D++IRIFP +   SRE+YHTKRMQ V CV+++ D+ Y++ GSD+ N+RLWKA
Sbjct: 301 KEFVSASFDKSIRIFPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWKA 360

Query: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRLVLCPTLMFRQSASYNFMTPS- 420
            ASE+LGVL  REK   +Y + +K +++H P +KRI R    P  ++ Q      M  + 
Sbjct: 361 NASEKLGVLTSREKAAKDYNQKLKEKFQHYPHIKRIARHRHLPKSIYSQIQEQRIMKEAR 420

Query: 421 --IDIYRNQYSKP 429
              ++ R ++SKP
Sbjct: 421 RRKEVNRIKHSKP 427

[Close]

BLAST of Clc02G02470 vs. ExPASy TrEMBL
Match: A0A0A0K1Y9 (DDB1- and CUL4-associated factor 13 OS=Cucumis sativus OX=3659 GN=Csa_7G038680 PE=3 SV=1)

HSP 1 Score: 809.3 bits (2089), Expect = 9.0e-231
Identity = 391/411 (95.13%), Postives = 400/411 (97.32%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRTQEKAVEYVRALNAAKLDKMFAKPFIG 60
           MKVKVISRSTDEFTRERS DLQRVFRNFDPSLRTQEKAVEYVRA+NAAKLDKMFAKPFIG
Sbjct: 1   MKVKVISRSTDEFTRERSHDLQRVFRNFDPSLRTQEKAVEYVRAVNAAKLDKMFAKPFIG 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTICQFPGHQGAVRGLTASTD 120
           AMDGH+D+VSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRT+ QFPGHQGAVRGLTASTD
Sbjct: 61  AMDGHMDSVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVYQFPGHQGAVRGLTASTD 120

Query: 121 GRILISCGTDCT--LWNVPVPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180
           GRILISCGTDCT  LWNVPVPTLNSYETSNNSSEPLAVYVWKNAFWA+DHQWDGNLFATA
Sbjct: 121 GRILISCGTDCTVRLWNVPVPTLNSYETSNNSSEPLAVYVWKNAFWAIDHQWDGNLFATA 180

Query: 181 GAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARK 240
           GAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARK
Sbjct: 181 GAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARK 240

Query: 241 IIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG 300
           +IMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG
Sbjct: 241 VIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG 300

Query: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360
           REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA
Sbjct: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360

Query: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRLVLCPTLMFRQSA 410
           KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVR    P  +F+ +A
Sbjct: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAA 411

[Close]

BLAST of Clc02G02470 vs. ExPASy TrEMBL
Match: A0A6J1HYZ0 (DDB1- and CUL4-associated factor 13 OS=Cucurbita maxima OX=3661 GN=LOC111468188 PE=3 SV=1)

HSP 1 Score: 808.1 bits (2086), Expect = 2.0e-230
Identity = 388/411 (94.40%), Postives = 399/411 (97.08%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRTQEKAVEYVRALNAAKLDKMFAKPFIG 60
           MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRTQEKAVEYVRALNAAK+D+MFAKPFIG
Sbjct: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRTQEKAVEYVRALNAAKMDRMFAKPFIG 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTICQFPGHQGAVRGLTASTD 120
           AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRT+CQFPGHQGAVRGLTAS D
Sbjct: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTASAD 120

Query: 121 GRILISCGTDCT--LWNVPVPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180
           GRIL+SCGTDCT  LWN+P+PTLNSY TSNNSSEPLAVY WKNAFWAVDHQWDGNLFATA
Sbjct: 121 GRILVSCGTDCTVRLWNIPIPTLNSYVTSNNSSEPLAVYAWKNAFWAVDHQWDGNLFATA 180

Query: 181 GAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARK 240
           GAQLDIWDHNRSQPVSS+EWGTDSVISVRFNPGEPN+LATSASDRSIALYDLRMSSPARK
Sbjct: 181 GAQLDIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNILATSASDRSIALYDLRMSSPARK 240

Query: 241 IIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG 300
           IIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG
Sbjct: 241 IIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG 300

Query: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360
           REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA
Sbjct: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360

Query: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRLVLCPTLMFRQSA 410
           KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVR    P  +F+ +A
Sbjct: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAA 411

[Close]

BLAST of Clc02G02470 vs. ExPASy TrEMBL
Match: A0A5D3DDM7 (DDB1- and CUL4-associated factor 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold150G00210 PE=3 SV=1)

HSP 1 Score: 805.8 bits (2080), Expect = 9.9e-230
Identity = 390/411 (94.89%), Postives = 398/411 (96.84%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRTQEKAVEYVRALNAAKLDKMFAKPFIG 60
           MKVKVISRSTDEFTRERS DLQRVFRNFDPSLR QEKAVEYVRA+NAAKLDKMFAKPFIG
Sbjct: 1   MKVKVISRSTDEFTRERSHDLQRVFRNFDPSLRPQEKAVEYVRAVNAAKLDKMFAKPFIG 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTICQFPGHQGAVRGLTASTD 120
           AMDGH+DAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRT+CQFPGHQGAVRGLTASTD
Sbjct: 61  AMDGHMDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTASTD 120

Query: 121 GRILISCGTDCT--LWNVPVPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180
           GRILISCGTDCT  LWNVP PTLNSYETSNN+SEPLAVYVWKNAFWAVDHQWDGNLFATA
Sbjct: 121 GRILISCGTDCTVRLWNVPFPTLNSYETSNNASEPLAVYVWKNAFWAVDHQWDGNLFATA 180

Query: 181 GAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARK 240
           GAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARK
Sbjct: 181 GAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARK 240

Query: 241 IIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG 300
           +IMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG
Sbjct: 241 VIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG 300

Query: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360
           REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFS DASYVISGSDDTNLRLWKA
Sbjct: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSSDASYVISGSDDTNLRLWKA 360

Query: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRLVLCPTLMFRQSA 410
           KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVR    P  +F+ +A
Sbjct: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAA 411

[Close]

BLAST of Clc02G02470 vs. ExPASy TrEMBL
Match: A0A1S3C170 (DDB1- and CUL4-associated factor 13 OS=Cucumis melo OX=3656 GN=LOC103495648 PE=3 SV=1)

HSP 1 Score: 805.8 bits (2080), Expect = 9.9e-230
Identity = 390/411 (94.89%), Postives = 398/411 (96.84%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRTQEKAVEYVRALNAAKLDKMFAKPFIG 60
           MKVKVISRSTDEFTRERS DLQRVFRNFDPSLR QEKAVEYVRA+NAAKLDKMFAKPFIG
Sbjct: 1   MKVKVISRSTDEFTRERSHDLQRVFRNFDPSLRPQEKAVEYVRAVNAAKLDKMFAKPFIG 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTICQFPGHQGAVRGLTASTD 120
           AMDGH+DAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRT+CQFPGHQGAVRGLTASTD
Sbjct: 61  AMDGHMDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTASTD 120

Query: 121 GRILISCGTDCT--LWNVPVPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180
           GRILISCGTDCT  LWNVP PTLNSYETSNN+SEPLAVYVWKNAFWAVDHQWDGNLFATA
Sbjct: 121 GRILISCGTDCTVRLWNVPFPTLNSYETSNNASEPLAVYVWKNAFWAVDHQWDGNLFATA 180

Query: 181 GAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARK 240
           GAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARK
Sbjct: 181 GAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARK 240

Query: 241 IIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG 300
           +IMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG
Sbjct: 241 VIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG 300

Query: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360
           REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFS DASYVISGSDDTNLRLWKA
Sbjct: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSSDASYVISGSDDTNLRLWKA 360

Query: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRLVLCPTLMFRQSA 410
           KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVR    P  +F+ +A
Sbjct: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAA 411

[Close]

BLAST of Clc02G02470 vs. ExPASy TrEMBL
Match: A0A6J1JKI5 (DDB1- and CUL4-associated factor 13 OS=Cucurbita maxima OX=3661 GN=LOC111486015 PE=3 SV=1)

HSP 1 Score: 803.5 bits (2074), Expect = 4.9e-229
Identity = 385/411 (93.67%), Postives = 400/411 (97.32%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRTQEKAVEYVRALNAAKLDKMFAKPFIG 60
           MKVKVISRSTDEFTRERSQDLQRVFRNFDP+LRTQEKAVEYVRA+NAAKLD+MFAKPFIG
Sbjct: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRTQEKAVEYVRAINAAKLDRMFAKPFIG 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTICQFPGHQGAVRGLTASTD 120
           AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRT+CQFPGHQGAVRGLT+S+D
Sbjct: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTSSSD 120

Query: 121 GRILISCGTDCT--LWNVPVPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180
           GRILISCGTDCT  LWN+P+PTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA
Sbjct: 121 GRILISCGTDCTVRLWNIPIPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA 180

Query: 181 GAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPARK 240
           GAQL+IWDHNRSQPVSS+EWGTDSVISVRFNPGEPNVLATSASDRSI LYDLRMSSP RK
Sbjct: 181 GAQLNIWDHNRSQPVSSFEWGTDSVISVRFNPGEPNVLATSASDRSITLYDLRMSSPVRK 240

Query: 241 IIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPSG 300
           IIM+TKTNSICWNPREPMNFTAANEDCNCYSYDSR+LDEAKCVHRDHVSAVMDIDFSPSG
Sbjct: 241 IIMQTKTNSICWNPREPMNFTAANEDCNCYSYDSRRLDEAKCVHRDHVSAVMDIDFSPSG 300

Query: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360
           REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA
Sbjct: 301 REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA 360

Query: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRLVLCPTLMFRQSA 410
           KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVR    P  +F+ +A
Sbjct: 361 KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAA 411

[Close]

BLAST of Clc02G02470 vs. TAIR 10
Match: AT4G28450.1 (nucleotide binding;protein binding )

HSP 1 Score: 694.5 bits (1791), Expect = 6.2e-200
Identity = 329/399 (82.46%), Postives = 366/399 (91.73%), Query Frame = 0


Query: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPSLRTQEKAVEYVRALNAAKLDKMFAKPFIG 60
           MK+K +SRS DE+TRERSQDLQRVF NFDPSLR  EKAVEY RAL AAKL+K+FA+PF+G
Sbjct: 1   MKIKTLSRSVDEYTRERSQDLQRVFHNFDPSLRPMEKAVEYQRALTAAKLEKIFARPFVG 60

Query: 61  AMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTICQFPGHQGAVRGLTASTD 120
           AMDGH D VSCMAKNPN+LKGIFS SMDGDIRLWDI++RRT+CQFPGHQGAVRGLTASTD
Sbjct: 61  AMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTD 120

Query: 121 GRILISCGTDCT--LWNVPVPTL-NSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFAT 180
           G +L+SCGTDCT  LWNVP P+L +S  +S N  EP A YVWKNAFWAVDHQ++G+LFAT
Sbjct: 121 GNVLVSCGTDCTVRLWNVPRPSLEDSSISSENFIEPSATYVWKNAFWAVDHQFEGDLFAT 180

Query: 181 AGAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPAR 240
           AGAQLDIW+HNRSQPV S++WGTDSVISVRFNPGEPN+LATSASDRSI +YDLR+SS AR
Sbjct: 181 AGAQLDIWNHNRSQPVQSFQWGTDSVISVRFNPGEPNLLATSASDRSITIYDLRLSSAAR 240

Query: 241 KIIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSPS 300
           KIIM TKTNSI WNP EPMN TAANED +CYS+D RKLDEAKCVH+DHVSAVMDIDFSP+
Sbjct: 241 KIIMMTKTNSIAWNPMEPMNLTAANEDGSCYSFDGRKLDEAKCVHKDHVSAVMDIDFSPT 300

Query: 301 GREFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWK 360
           GREFVTGSYDR++RIFPYNGGHSREIYHTKRMQRVFCV++SCDA+YVISGSDDTNLRLWK
Sbjct: 301 GREFVTGSYDRSVRIFPYNGGHSREIYHTKRMQRVFCVKYSCDATYVISGSDDTNLRLWK 360

Query: 361 AKASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVR 397
           AKASEQLGV+LPRE++KHEY EAVKNRYKHL EVKRIVR
Sbjct: 361 AKASEQLGVILPREQKKHEYNEAVKNRYKHLSEVKRIVR 399

[Close]

BLAST of Clc02G02470 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 70.1 bits (170), Expect = 5.7e-12
Identity = 57/263 (21.67%), Postives = 115/263 (43.73%), Query Frame = 0


Query: 108 HQGAVRGLTASTDGRILISCGTDCTLWNVPVPTLNSYETSNNSSEPLAVYV-WKNAFWAV 167
           H  AV  +  S+DGR+L S   D T+    + T+N     +  +EP+  +   +N    V
Sbjct: 23  HNRAVSSVKFSSDGRLLASASADKTIRTYTINTIN-----DPIAEPVQEFTGHENGISDV 82

Query: 168 DHQWDGNLFATAG--AQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRS 227
               D     +A     L +WD      + +    T+    V FNP + N++ + + D +
Sbjct: 83  AFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNP-QSNMIVSGSFDET 142

Query: 228 IALYDLRMSSPARKIIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRD 287
           + ++D+      + +   +   +     R+     +++ D  C  +DS      K +  D
Sbjct: 143 VRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDD 202

Query: 288 HVSAVMDIDFSPSGREFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCV--RFS-CDA 347
               V  + FSP+G+  + G+ D T+R++  +     + Y T  +   +C+   FS  + 
Sbjct: 203 ENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTY-TGHVNAQYCISSAFSVTNG 262

Query: 348 SYVISGSDDTNLRLWKAKASEQL 365
             ++SGS+D  + +W+  + + L
Sbjct: 263 KRIVSGSEDNCVHMWELNSKKLL 278

[Close]

BLAST of Clc02G02470 vs. TAIR 10
Match: AT4G02730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 9.8e-12
Identity = 52/204 (25.49%), Postives = 101/204 (49.51%), Query Frame = 0


Query: 171 DGNLFATAGAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDL 230
           + N    AG   ++  +   + + + E  T ++  V+F+  + N+LA+++ D+++ L+  
Sbjct: 14  NANSTGNAGTSGNVPIYKPYRHLKTLEGHTAAISCVKFS-NDGNLLASASVDKTMILW-- 73

Query: 231 RMSSPARKIIMRTKTNS-----ICWNPREPMNFT-AANEDCNCYSYDSRKLDEAKCVHRD 290
             S+    +I R + +S     + W+     ++T +A++DC    +D+R   E   V R 
Sbjct: 74  --SATNYSLIHRYEGHSSGISDLAWS--SDSHYTCSASDDCTLRIWDARSPYECLKVLRG 133

Query: 291 HVSAVMDIDFSPSGREFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYV 350
           H + V  ++F+P     V+GS+D TIRI+    G    +     M  +  V F+ D S +
Sbjct: 134 HTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMP-ISSVHFNRDGSLI 193

Query: 351 ISGSDDTNLRLWKAKASEQLGVLL 369
           +S S D + ++W AK    L  L+
Sbjct: 194 VSASHDGSCKIWDAKEGTCLKTLI 209

[Close]

BLAST of Clc02G02470 vs. TAIR 10
Match: AT3G15610.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 63.5 bits (153), Expect = 5.4e-10
Identity = 67/276 (24.28%), Postives = 107/276 (38.77%), Query Frame = 0


Query: 58  FIGAMDGHLDAVSCMAKNPNHLKGIFSGSMDGDIRLWDIANRRTICQFPGHQGAVRGLTA 117
           +IG  +GH  AV     + N L+   S S D   +LWD      +  F  H+  VR    
Sbjct: 53  WIGTFEGHKGAVWSSCLDNNALRAA-SASADFSAKLWDALTGDVLHSFE-HKHIVRACAF 112

Query: 118 STDGRILISCGTDCTLWNVPVPTLNSYETS-NNSSEPLAVYVWKNAFWAVDHQWDGNLFA 177
           S D + LI+ G +  L    +  L++  T  + S   +    W +     D     +   
Sbjct: 113 SQDTKYLITGGFEKILRVFDLNRLDAPPTEIDKSPGSIRTLTWLHG----DQTILSSCTD 172

Query: 178 TAGAQLDIWDHNRSQPVSSYEWGTDSVISVRFNPGEPNVLATSASDRSIALYDLRMSSPA 237
             G +L  WD    + V + E  T S ++      +     T+A   ++  +D       
Sbjct: 173 IGGVRL--WDVRSGKIVQTLE--TKSPVT-SAEVSQDGRYITTADGSTVKFWDANHFGLV 232

Query: 238 RKIIMRTKTNSICWNPREPMNFTAANEDCNCYSYDSRKLDEAKCVHRDHVSAVMDIDFSP 297
           +   M     S    P+    F A  ED     +D     E  C ++ H   V  + F+P
Sbjct: 233 KSYDMPCNIESASLEPKSGNKFVAGGEDMWVRLFDFHTGKEIGC-NKGHHGPVHCVRFAP 292

Query: 298 SGREFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRV 333
           +G  + +GS D TIRI+     +  EI  +K  Q V
Sbjct: 293 TGESYASGSEDGTIRIWQTGPVNPEEISESKPKQSV 316

[Close]

BLAST of Clc02G02470 vs. TAIR 10
Match: AT1G10580.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 57.0 bits (136), Expect = 5.0e-08
Identity = 60/279 (21.51%), Postives = 107/279 (38.35%), Query Frame = 0


Query: 99  RRTICQFPGHQGAVRGLT-ASTDGRILISCGTDC--TLWNVPVPTLNSYETSNNSSEPLA 158
           +R +  + GH   V  +      G +L+S G DC   +W+V            NS + + 
Sbjct: 272 KRLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDV-----------YNSGKCMR 331

Query: 159 VYV-WKNAFWAVDHQWDGNLFATAGAQLDI--WDHNRSQPVSSYEWGTDSVISVRFNPGE 218
            Y+    A   +    DG+ F TAG   +I  WD    Q +S++  G    + V+ NP +
Sbjct: 332 TYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYV-VKLNPDD 391

Query: 219 --PNVLATSASDRSIALYDLRMSSPARKIIMRTKTNSICWNPREPMNFTAANEDCNCYSY 278
              N+L    SD+ I  +D+      ++        +          F  +++D +   +
Sbjct: 392 DKQNILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW 451

Query: 279 DSRKLDEAKCVHRDHVSAVMDIDFSPSGREFVTGSYDRTIRIFPYNGGHSREIYHTKRMQ 338
           +       K +   H+ ++  I   P+G      S D  I I+      +RE +   + +
Sbjct: 452 EFGIPVVIKYISEPHMHSMPSISVHPNGNWLAAQSLDNQILIY-----STRERFQLNKKK 511

Query: 339 R---------VFCVRFSCDASYVISGSDDTNLRLWKAKA 361
           R            V FS D  +V+SG  +     W  K+
Sbjct: 512 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS 533

The following BLAST results are available for this feature:

BLAST of Clc02G02470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887278.1	2.6e-232	95.86	DDB1- and CUL4-associated factor 13 [Benincasa hispida]	[more]
XP_004144522.1	1.9e-230	95.13	DDB1- and CUL4-associated factor 13 [Cucumis sativus] >KGN43468.1 hypothetical p...	[more]
XP_023554471.1	3.2e-230	94.65	DDB1- and CUL4-associated factor 13-like [Cucurbita pepo subsp. pepo]	[more]
XP_022969085.1	4.1e-230	94.40	DDB1- and CUL4-associated factor 13-like [Cucurbita maxima]	[more]
TYK21623.1	2.0e-229	94.89	DDB1- and CUL4-associated factor 13 [Cucumis melo var. makuwa]	[more]

BLAST of Clc02G02470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5ZLK1	2.2e-117	46.65	DDB1- and CUL4-associated factor 13 OS=Gallus gallus OX=9031 GN=DCAF13 PE=2 SV=1	[more]
Q6PAC3	2.4e-116	46.19	DDB1- and CUL4-associated factor 13 OS=Mus musculus OX=10090 GN=Dcaf13 PE=2 SV=2	[more]
Q7ZYQ6	1.2e-115	46.65	DDB1- and CUL4-associated factor 13 OS=Xenopus laevis OX=8355 GN=dcaf13 PE=2 SV=...	[more]
Q6NVS5	1.2e-115	46.19	DDB1- and CUL4-associated factor 13 OS=Xenopus tropicalis OX=8364 GN=dcaf13 PE=2...	[more]
Q9NV06	3.5e-115	45.96	DDB1- and CUL4-associated factor 13 OS=Homo sapiens OX=9606 GN=DCAF13 PE=1 SV=2	[more]

BLAST of Clc02G02470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K1Y9	9.0e-231	95.13	DDB1- and CUL4-associated factor 13 OS=Cucumis sativus OX=3659 GN=Csa_7G038680 P...	[more]
A0A6J1HYZ0	2.0e-230	94.40	DDB1- and CUL4-associated factor 13 OS=Cucurbita maxima OX=3661 GN=LOC111468188 ...	[more]
A0A5D3DDM7	9.9e-230	94.89	DDB1- and CUL4-associated factor 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3C170	9.9e-230	94.89	DDB1- and CUL4-associated factor 13 OS=Cucumis melo OX=3656 GN=LOC103495648 PE=3...	[more]
A0A6J1JKI5	4.9e-229	93.67	DDB1- and CUL4-associated factor 13 OS=Cucurbita maxima OX=3661 GN=LOC111486015 ...	[more]

BLAST of Clc02G02470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28450.1	6.2e-200	82.46	nucleotide binding;protein binding	[more]
AT3G49660.1	5.7e-12	21.67	Transducin/WD40 repeat-like superfamily protein	[more]
AT4G02730.1	9.8e-12	25.49	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G15610.1	5.4e-10	24.28	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G10580.1	5.0e-08	21.51	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 344..358 score: 33.62 coord: 82..96 score: 40.18 coord: 216..230 score: 28.49
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 275..314 e-value: 2.1E-5 score: 33.9 coord: 316..357 e-value: 0.0011 score: 28.2 coord: 150..186 e-value: 130.0 score: 3.7 coord: 55..95 e-value: 4.9E-5 score: 32.7 coord: 98..135 e-value: 5.6E-4 score: 29.2 coord: 232..271 e-value: 390.0 score: 0.6 coord: 189..229 e-value: 5.3E-4 score: 29.3
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 102..133 e-value: 0.07 score: 14.0 coord: 280..313 e-value: 1.0E-4 score: 23.0 coord: 325..357 e-value: 1.3E-4 score: 22.6 coord: 62..95 e-value: 0.0014 score: 19.4
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 62..104 score: 12.780889
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 325..366 score: 10.675542
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 282..313 score: 11.009724
IPR007287	Sof1-like protein	PFAM	PF04158	Sof1	coord: 358..414 e-value: 8.2E-14 score: 51.6
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 239..376 e-value: 9.2E-23 score: 83.1
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 140..238 e-value: 2.0E-10 score: 42.3
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 46..139 e-value: 2.3E-18 score: 68.5
None	No IPR available	PANTHER	PTHR22851	U3 SMALL NUCLEOLAR RNA U3 SNORNA ASSOCIATED PROTEIN	coord: 1..408
None	No IPR available	PANTHER	PTHR22851:SF2	NUCLEOTIDE BINDING	coord: 1..408
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 282..313 score: 9.230148
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 62..96 score: 10.15287
None	No IPR available	CDD	cd00200	WD40	coord: 59..357 e-value: 6.83713E-42 score: 149.408
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 82..96
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 55..357

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G02470.2	Clc02G02470.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0080008	Cul4-RING E3 ubiquitin ligase complex
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0032040	small-subunit processome
molecular_function	GO:0005515	protein binding