Clc02G02400 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc02G02400
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	fasciclin-like arabinogalactan protein 6
Location	ClcChr02: 2201888 .. 2204170 (+)
RNA-Seq Expression	Clc02G02400
Synteny	Clc02G02400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAGTTTGAAGAGAGGGACCAAGTGATCAATTTTAGCCTTAAAAAAAAAAAGAAAAAAAAAGAAAAAGAAGAAGAAAAGAACTTTTGGGTAAATGTATATTGAGATTTGAAAGAGGCATAACGCCGTAGACTTTTGGCCATTATTCTATAATTCCATTCTATCTTTTCCCGTCAAGCTCTGAGTTGTCGCCATTAAATCCAGCTCATTTCCAACCAATCCCACTTCCAACTCCCTCTTCGCTTTATATAAATTACCCACTAATTAATCTCCTCCTCCGTCACTGATCTACTCCTCCGCCATGGCCTCCGCCGCTCTTCTCCTCCTCCTTCTCCTCCCCTTTGCTCTCTTCTCTGAAACTCTTGCCCAAACTCCGGCCCCCCCTGGCCCAACTCCGGCAGGGCCAATCAACATAACCGGCATTCTAGCCCAAGGCGGCCAATTCGGCACCTTCATCCGTTTGCTGAATGAAAGCAGATTAATCACTCAGCTTGAGAATCAGCTCAACAATTCTCAGGGAGAGGGACTCACCATTATTGCTCCCACTGATAATGGCTTCAACGCCCTTAAATCCGGCGCCCTCAACAACCTTGACGACCAGCAGAAAAGCCAGCTCCTCCTCTACCATGTCTTGCCTAAGGTACACTTAATTATTAATATTAAAAATTTATGATGGTTATCTACCTAATAATTAAGATCCTACTAGTTTACTTCACACCTAAATGTTATAGAGTCATGCGGTTATTCCGTGAGATTAGTAGTTGAAATGCACATAAACTAGTCCAGACACTCTCGGATATTTCAAAAAAGAAGAAATATTAACCCTAAAAGTTTTATCCATTGCAATTACCCTTTATTTTTTATATGATTGGAGGAAGTTACAAAAAGATGGATATTCAAGTATTACTCTATTTTCATCCACATGTGTGTATACCTATCCGTTCAATAGATATACGCAAGATAAAACAAATGTCTTTAAAATTGAACAATAATTCTCTATTGATTTAGTGGAAATTTTACTCAAGTTTTTTTTTTTTTTTTAAATGCTAAATTACAAAAATTGTCTCTAAATATTACTTTTTATTTTAAAAATAAATACTGTATTTTAACAAAAGTTGCAATATTAGTTTTTGACTTTTTATATAGACACATCAAAGCATAAATTCATTCATTTAGACAAAGTTAGAATTTCGAAACATTTTGTGACAATAACTTAAAACCAATATTGAGACTTAAGTATCATTACATTATTACACGTCACTATCCTAAATCATTTTAGGTCTCAAATATTCATCATCTACTAATATTTTTAACCATTTGTATTCTAATTGTAATTTAGTCAAAGAAAAGTTTAGTATACTATTACAATTTTTAAAAGAATATGAATATTTTTTTAATTGAGACTTTTTTTTTTTAGATAGGAGAGATGTTTTTTTATTTTCCCCTCTTTATCTAAAGTATTATTCCATGTGATTCTTAATTAATTTATTTAAAAAAATGGTTTTGAAATGCTTAATTTATTTATTTTAGTTATTACCATCCACCACATTTTTCATGCAATTGAAAGTTACGGTATTCAAATTTAAAACTTTGGTTTTTGAATTTTGATGGCAGTTCTACACCGTGACGGATCTGCAGACCGTCAGCAACCCCGTGAGGACTCAGGCCGGAGACTGGGGGCTGAACTTTACCGGCCAACCGAATTCGAACCAAGTCAACGTTTCCACCGGCGTCGTCACCGTACCGATCAACAACAAGCTCAGAGAGCAACGTCCATTGTGTGTTTTAGTAGTAGACCAAGTTTTGTTGCCTGAGGCTCTTTTTGGCAACCACACCGCCGCACCACCCCCGAAAGCTCCAGCTCCGGGGACCGATAAGCCCCCAGCCGACGGCGAAACTCCGTCAAAATCCGACGCCGCAAACCCACCGACGAATGATAAGGGTGCGGCTGTGAGAAACGGCGTCGGATTGGGATTGGTTTTGAGTTTTGGTTTGATTGCCATTAGTTTTCTTTCTTAAGATCATATATGAGTTTGAGTTTGAGGAAAAGCGTTTGTTCTTTGTGTGCTTTTTCTTCTCATATATGCTTTGATTTTTTTTTTTTTTTTCCCTTGTAATTTTTCCTACCATTCTCTTAAATTGCATTATTTCTTTTCATTATTACATGCATATAAATTTTAAATAATCCTTCTTCATTTTTCTCTTTATTAGTCTCAAACTTATTACAACGTGAACCATTCGTTGATAAGACATATTGCCAAAATATCAATATCTAAACATGTGG

mRNA sequence

CTAAGTTTGAAGAGAGGGACCAAGTGATCAATTTTAGCCTTAAAAAAAAAAAGAAAAAAAAAGAAAAAGAAGAAGAAAAGAACTTTTGGGTAAATGTATATTGAGATTTGAAAGAGGCATAACGCCGTAGACTTTTGGCCATTATTCTATAATTCCATTCTATCTTTTCCCGTCAAGCTCTGAGTTGTCGCCATTAAATCCAGCTCATTTCCAACCAATCCCACTTCCAACTCCCTCTTCGCTTTATATAAATTACCCACTAATTAATCTCCTCCTCCGTCACTGATCTACTCCTCCGCCATGGCCTCCGCCGCTCTTCTCCTCCTCCTTCTCCTCCCCTTTGCTCTCTTCTCTGAAACTCTTGCCCAAACTCCGGCCCCCCCTGGCCCAACTCCGGCAGGGCCAATCAACATAACCGGCATTCTAGCCCAAGGCGGCCAATTCGGCACCTTCATCCGTTTGCTGAATGAAAGCAGATTAATCACTCAGCTTGAGAATCAGCTCAACAATTCTCAGGGAGAGGGACTCACCATTATTGCTCCCACTGATAATGGCTTCAACGCCCTTAAATCCGGCGCCCTCAACAACCTTGACGACCAGCAGAAAAGCCAGCTCCTCCTCTACCATGTCTTGCCTAAGTTCTACACCGTGACGGATCTGCAGACCGTCAGCAACCCCGTGAGGACTCAGGCCGGAGACTGGGGGCTGAACTTTACCGGCCAACCGAATTCGAACCAAGTCAACGTTTCCACCGGCGTCGTCACCGTACCGATCAACAACAAGCTCAGAGAGCAACGTCCATTGTGTGTTTTAGTAGTAGACCAAGTTTTGTTGCCTGAGGCTCTTTTTGGCAACCACACCGCCGCACCACCCCCGAAAGCTCCAGCTCCGGGGACCGATAAGCCCCCAGCCGACGGCGAAACTCCGTCAAAATCCGACGCCGCAAACCCACCGACGAATGATAAGGGTGCGGCTGTGAGAAACGGCGTCGGATTGGGATTGGTTTTGAGTTTTGGTTTGATTGCCATTAGTTTTCTTTCTTAAGATCATATATGAGTTTGAGTTTGAGGAAAAGCGTTTGTTCTTTGTGTGCTTTTTCTTCTCATATATGCTTTGATTTTTTTTTTTTTTTTCCCTTGTAATTTTTCCTACCATTCTCTTAAATTGCATTATTTCTTTTCATTATTACATGCATATAAATTTTAAATAATCCTTCTTCATTTTTCTCTTTATTAGTCTCAAACTTATTACAACGTGAACCATTCGTTGATAAGACATATTGCCAAAATATCAATATCTAAACATGTGG

Coding sequence (CDS)

ATGGCCTCCGCCGCTCTTCTCCTCCTCCTTCTCCTCCCCTTTGCTCTCTTCTCTGAAACTCTTGCCCAAACTCCGGCCCCCCCTGGCCCAACTCCGGCAGGGCCAATCAACATAACCGGCATTCTAGCCCAAGGCGGCCAATTCGGCACCTTCATCCGTTTGCTGAATGAAAGCAGATTAATCACTCAGCTTGAGAATCAGCTCAACAATTCTCAGGGAGAGGGACTCACCATTATTGCTCCCACTGATAATGGCTTCAACGCCCTTAAATCCGGCGCCCTCAACAACCTTGACGACCAGCAGAAAAGCCAGCTCCTCCTCTACCATGTCTTGCCTAAGTTCTACACCGTGACGGATCTGCAGACCGTCAGCAACCCCGTGAGGACTCAGGCCGGAGACTGGGGGCTGAACTTTACCGGCCAACCGAATTCGAACCAAGTCAACGTTTCCACCGGCGTCGTCACCGTACCGATCAACAACAAGCTCAGAGAGCAACGTCCATTGTGTGTTTTAGTAGTAGACCAAGTTTTGTTGCCTGAGGCTCTTTTTGGCAACCACACCGCCGCACCACCCCCGAAAGCTCCAGCTCCGGGGACCGATAAGCCCCCAGCCGACGGCGAAACTCCGTCAAAATCCGACGCCGCAAACCCACCGACGAATGATAAGGGTGCGGCTGTGAGAAACGGCGTCGGATTGGGATTGGTTTTGAGTTTTGGTTTGATTGCCATTAGTTTTCTTTCTTAA

Protein sequence

MASAALLLLLLLPFALFSETLAQTPAPPGPTPAGPINITGILAQGGQFGTFIRLLNESRLITQLENQLNNSQGEGLTIIAPTDNGFNALKSGALNNLDDQQKSQLLLYHVLPKFYTVTDLQTVSNPVRTQAGDWGLNFTGQPNSNQVNVSTGVVTVPINNKLREQRPLCVLVVDQVLLPEALFGNHTAAPPPKAPAPGTDKPPADGETPSKSDAANPPTNDKGAAVRNGVGLGLVLSFGLIAISFLS

Homology

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BLAST of Clc02G02400 vs. NCBI nr
Match: XP_038887446.1 (fasciclin-like arabinogalactan protein 13 [Benincasa hispida])

HSP 1 Score: 416.0 bits (1068), Expect = 2.3e-112
Identity = 219/247 (88.66%), Postives = 226/247 (91.50%), Query Frame = 0


Query: 1   MASAALLLLLLLPFALFSETLAQTPAPPGPTPAGPINITGILAQGGQFGTFIRLLNESRL 60
           MASAALLLLLLLPFALFSETLAQTPAPP  +P GPINITGILAQGGQF TFIRLLNESRL
Sbjct: 1   MASAALLLLLLLPFALFSETLAQTPAPPARSPPGPINITGILAQGGQFNTFIRLLNESRL 60

Query: 61  ITQLENQLNNSQGEGLTIIAPTDNGFNALKSGALNNLDDQQKSQLLLYHVLPKFYTVTDL 120
           I QL+NQLNNSQGEGLTI+APTDNGFNALKSGALN LDDQQKSQLLLYHVLPKFYT+T+L
Sbjct: 61  IIQLDNQLNNSQGEGLTILAPTDNGFNALKSGALNGLDDQQKSQLLLYHVLPKFYTLTEL 120

Query: 121 QTVSNPVRTQAGDWGLNFTGQPNSNQVNVSTGVVTVPINNKLREQRPLCVLVVDQVLLPE 180
           QTVSNPVRTQAGDWGLNFTGQ NSNQVNVSTG+VTVPINNKLREQ PL V VV+QVL PE
Sbjct: 121 QTVSNPVRTQAGDWGLNFTGQANSNQVNVSTGIVTVPINNKLREQSPLSVFVVEQVLSPE 180

Query: 181 ALFGNHTAAPPPKAPAPGTDKPPADGETPSKSDAANPPTNDKGAAVRNGVGLGLVLSFGL 240
            LFGNHTAAPPPKA AP  DK P DGETP KSDAANPPTNDKGAAVRN VGLGLVLSFGL
Sbjct: 181 ELFGNHTAAPPPKASAPEADKSPVDGETPPKSDAANPPTNDKGAAVRNSVGLGLVLSFGL 240

Query: 241 IAISFLS 248
           I IS LS
Sbjct: 241 IVISVLS 247

[Close]

BLAST of Clc02G02400 vs. NCBI nr
Match: XP_008455488.1 (PREDICTED: fasciclin-like arabinogalactan protein 6 [Cucumis melo])

HSP 1 Score: 414.5 bits (1064), Expect = 6.6e-112
Identity = 213/247 (86.23%), Postives = 228/247 (92.31%), Query Frame = 0


Query: 1   MASAALLLLLLLPFALFSETLAQTPAPPGPTPAGPINITGILAQGGQFGTFIRLLNESRL 60
           MAS ALLLLLLLPFALFS+TLAQTPA P P+P GPIN+TGIL+QGGQF TFIRLLN+SRL
Sbjct: 1   MASPALLLLLLLPFALFSQTLAQTPAAPAPSPPGPINLTGILSQGGQFSTFIRLLNQSRL 60

Query: 61  ITQLENQLNNSQGEGLTIIAPTDNGFNALKSGALNNLDDQQKSQLLLYHVLPKFYTVTDL 120
           I QL+NQLNNSQGEGLTI+APTDNGFNAL+SGALN+LDDQQKSQLLLYHVLPKFYT+T+L
Sbjct: 61  IIQLDNQLNNSQGEGLTILAPTDNGFNALESGALNSLDDQQKSQLLLYHVLPKFYTLTEL 120

Query: 121 QTVSNPVRTQAGDWGLNFTGQPNSNQVNVSTGVVTVPINNKLREQRPLCVLVVDQVLLPE 180
           QT+SNPVRTQAGDWGLNFTGQ NSNQVNVSTGVVTVPINNKLREQ PL V VVD+VLLPE
Sbjct: 121 QTISNPVRTQAGDWGLNFTGQANSNQVNVSTGVVTVPINNKLREQSPLSVFVVDKVLLPE 180

Query: 181 ALFGNHTAAPPPKAPAPGTDKPPADGETPSKSDAANPPTNDKGAAVRNGVGLGLVLSFGL 240
           ALFGNHTAAPPPKAPAPG DK P DGETP KSDAA PP NDKGAA RNGVGLGL+LSFGL
Sbjct: 181 ALFGNHTAAPPPKAPAPGADKAPVDGETPPKSDAAKPPANDKGAAARNGVGLGLILSFGL 240

Query: 241 IAISFLS 248
           I IS +S
Sbjct: 241 IVISVVS 247

[Close]

BLAST of Clc02G02400 vs. NCBI nr
Match: XP_004144519.1 (fasciclin-like arabinogalactan protein 13 [Cucumis sativus] >KGN43478.1 hypothetical protein Csa_020563 [Cucumis sativus])

HSP 1 Score: 392.9 bits (1008), Expect = 2.1e-105
Identity = 204/247 (82.59%), Postives = 222/247 (89.88%), Query Frame = 0


Query: 1   MASAALLLLLLLPFALFSETLAQTPAPPGPTPAGPINITGILAQGGQFGTFIRLLNESRL 60
           MASAA LLLLLLPFALF +TLAQTPA PGP+P GPIN+TGIL++GGQF TFIRLLNESRL
Sbjct: 1   MASAA-LLLLLLPFALFCQTLAQTPAAPGPSPPGPINLTGILSEGGQFSTFIRLLNESRL 60

Query: 61  ITQLENQLNNSQGEGLTIIAPTDNGFNALKSGALNNLDDQQKSQLLLYHVLPKFYTVTDL 120
           ITQL+NQLNNSQG GLTI+APTDNGFN+L+ GALN LDDQQKSQLLLYHVLPKFYT+ +L
Sbjct: 61  ITQLDNQLNNSQGGGLTILAPTDNGFNSLRPGALNALDDQQKSQLLLYHVLPKFYTLIEL 120

Query: 121 QTVSNPVRTQAGDWGLNFTGQPNSNQVNVSTGVVTVPINNKLREQRPLCVLVVDQVLLPE 180
           QTVSNPVRTQAGDWGLNFTGQ NSNQVNVSTG++T PINNKLREQ PL + VVDQVLLP+
Sbjct: 121 QTVSNPVRTQAGDWGLNFTGQANSNQVNVSTGIITAPINNKLREQSPLSIFVVDQVLLPD 180

Query: 181 ALFGNHTAAPPPKAPAPGTDKPPADGETPSKSDAANPPTNDKGAAVRNGVGLGLVLSFGL 240
           ALFGNHTAA PPKAPAPGTDK P DGETP KSDAA PP NDK A  +NGVGLGL+LSFGL
Sbjct: 181 ALFGNHTAA-PPKAPAPGTDKAPVDGETPPKSDAAKPPANDKSAVTKNGVGLGLILSFGL 240

Query: 241 IAISFLS 248
           I IS +S
Sbjct: 241 IVISVVS 245

[Close]

BLAST of Clc02G02400 vs. NCBI nr
Match: KAA0059126.1 (fasciclin-like arabinogalactan protein 6 [Cucumis melo var. makuwa] >TYK21631.1 fasciclin-like arabinogalactan protein 6 [Cucumis melo var. makuwa])

HSP 1 Score: 349.7 bits (896), Expect = 2.0e-92
Identity = 176/203 (86.70%), Postives = 188/203 (92.61%), Query Frame = 0


Query: 45  GGQFGTFIRLLNESRLITQLENQLNNSQGEGLTIIAPTDNGFNALKSGALNNLDDQQKSQ 104
           GGQF TFIRLLN+SRLI QL+NQLNNSQGEGLTI+APTDNGFNAL+SGALN+LDDQQKSQ
Sbjct: 7   GGQFSTFIRLLNQSRLIIQLDNQLNNSQGEGLTILAPTDNGFNALESGALNSLDDQQKSQ 66

Query: 105 LLLYHVLPKFYTVTDLQTVSNPVRTQAGDWGLNFTGQPNSNQVNVSTGVVTVPINNKLRE 164
           LLLYHVLPKFYT+T+LQT+SNPVRTQAGDWGLNFTGQ NSNQVNVSTGVVTVPINNKLRE
Sbjct: 67  LLLYHVLPKFYTLTELQTISNPVRTQAGDWGLNFTGQANSNQVNVSTGVVTVPINNKLRE 126

Query: 165 QRPLCVLVVDQVLLPEALFGNHTAAPPPKAPAPGTDKPPADGETPSKSDAANPPTNDKGA 224
           Q PL V VVD+VLLPEALFGNHTAAPPPKAPAPG DK P DGETP KSDAA PP NDKGA
Sbjct: 127 QSPLSVFVVDKVLLPEALFGNHTAAPPPKAPAPGADKAPVDGETPPKSDAAKPPANDKGA 186

Query: 225 AVRNGVGLGLVLSFGLIAISFLS 248
           A RNGVGLGL++SFGLI IS +S
Sbjct: 187 AARNGVGLGLIMSFGLIVISVVS 209

[Close]

BLAST of Clc02G02400 vs. NCBI nr
Match: XP_022930821.1 (fasciclin-like arabinogalactan protein 13 [Cucurbita moschata] >KAG6589141.1 Fasciclin-like arabinogalactan protein 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 336.7 bits (862), Expect = 1.7e-88
Identity = 183/248 (73.79%), Postives = 208/248 (83.87%), Query Frame = 0


Query: 1   MASAALLLLLLLPFALFS-ETLAQTPAPPGPTPAGPINITGILAQGGQFGTFIRLLNESR 60
           MAS ALLLLLLLPF LFS  TLAQTPA P P+  GP+NITGIL +GGQF TFIRLLNE++
Sbjct: 1   MASTALLLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK 60

Query: 61  LITQLENQLNNSQGEGLTIIAPTDNGFNALKSGALNNLDDQQKSQLLLYHVLPKFYTVTD 120
           + TQL+NQLNN+  +G+TI+APTDN FN+LK GALN L+DQ+K+QLLLYHVL KFYT+TD
Sbjct: 61  INTQLDNQLNNTP-QGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTD 120

Query: 121 LQTVSNPVRTQAGDWGLNFTGQPNSNQVNVSTGVVTVPINNKLREQRPLCVLVVDQVLLP 180
           LQTVSNPVRT AGDWGLNFTGQ  +NQVNVSTGVV V +NNKLREQ PL +  V+QVLLP
Sbjct: 121 LQTVSNPVRTLAGDWGLNFTGQ--ANQVNVSTGVVMVAVNNKLREQSPLSIYAVEQVLLP 180

Query: 181 EALFGNHTAAPPPKAPAPGTDKPPADGETPSKSDAANPPTNDKGAAVRNGVGLGLVLSFG 240
           EALFG+H AAPPPKA  P ++K PADGETP KSDAA+ P + K AA RNGVGLGLVL FG
Sbjct: 181 EALFGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFG 240

Query: 241 LIAISFLS 248
           LIA S LS
Sbjct: 241 LIAFSVLS 245

[Close]

BLAST of Clc02G02400 vs. ExPASy Swiss-Prot
Match: Q9FFH6 (Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana OX=3702 GN=FLA13 PE=1 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 6.7e-51
Identity = 129/255 (50.59%), Postives = 158/255 (61.96%), Query Frame = 0


Query: 1   MASAALLLLLLLPFALFSETLAQTPAPPGPTPAGPINITGILAQGGQFGTFIRLLNESRL 60
           MA+  LLLLLL    L +E  AQ  A P P PAGPINIT IL +GGQF T IRLLN    
Sbjct: 1   MATTPLLLLLLTAVFLSTEITAQR-AAPAPGPAGPINITAILEKGGQFVTLIRLLN---- 60

Query: 61  ITQLENQLN---NSQGEGLTIIAPTDNGFNALKSGALNNLDDQQKSQLLLYHVLPKFYTV 120
            TQ+ NQ+N   NS  EG+T++APTDN F  LK G LN L    + +L+LYHV PKFYT+
Sbjct: 61  TTQIGNQINIQINSSSEGMTVLAPTDNAFQNLKPGTLNKLSPDDQVKLILYHVSPKFYTL 120

Query: 121 TDLQTVSNPVRTQA------GDWGLNFTGQPNSNQVNVSTGVVTVPINNKLREQRPLCVL 180
            DL +VSNPVRTQA      G +GLNFTGQ   NQVNVSTGVV   ++  LR++RPL V 
Sbjct: 121 EDLLSVSNPVRTQASGRDVGGVYGLNFTGQ--GNQVNVSTGVVETRLSTSLRQERPLAVY 180

Query: 181 VVDQVLLPEALFGNHTAAPPPKAPAPGTDKPPADGETPSKSDAANPPTNDKGAAVRNGVG 240
           VVD VLLPE +FG    +  P AP P +  P    ++ S   AA P  ++K  +     G
Sbjct: 181 VVDMVLLPEEMFGERKIS--PMAPPPKSKSPDVSDDSESSKKAAAPSESEKSGSGEMNTG 240

Query: 241 LGLVLSFGLIAISFL 247
           LGL L   ++ + FL
Sbjct: 241 LGLGLGLVVLCLKFL 246

[Close]

BLAST of Clc02G02400 vs. ExPASy Swiss-Prot
Match: Q9ZWA8 (Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=FLA9 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 7.0e-48
Identity = 125/256 (48.83%), Postives = 158/256 (61.72%), Query Frame = 0


Query: 1   MASAALLL--LLLLPFALFSETLAQTPAPPGPTPAGPINITGILAQGGQFGTFIRLLNES 60
           MA+  L L  LLL+   L +      PA P P PAGPIN+T IL +GGQF TFI LLN  
Sbjct: 1   MATTRLTLAPLLLIAAVLLATKATAQPAAPAPEPAGPINLTAILEKGGQFTTFIHLLN-- 60

Query: 61  RLITQLENQLN---NSQGEGLTIIAPTDNGFNALKSGALNNLDDQQKSQLLLYHVLPKFY 120
             ITQ+ +Q+N   NS  EG+T+ APTDN F  LK G LN L    + +L+LYHV PK+Y
Sbjct: 61  --ITQVGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQLSPDDQVKLILYHVSPKYY 120

Query: 121 TVTDLQTVSNPVRTQA-----GDWGLNFTGQPNSNQVNVSTGVVTVPINNKLREQRPLCV 180
           ++ DL +VSNPVRTQA     G +GLNFTGQ  +NQ+NVSTG V   I+N LR+QRPL V
Sbjct: 121 SMDDLLSVSNPVRTQASGRDNGVYGLNFTGQ--TNQINVSTGYVETRISNSLRQQRPLAV 180

Query: 181 LVVDQVLLPEALFGNHTAAPPPKAPAPGTDKPPADGETPSKSDAANPPTNDKGAAVRNGV 240
            VVD VLLP  +FG H  +  P APAP +       ++ S   AA+P  +DK  +    V
Sbjct: 181 YVVDMVLLPGEMFGEHKLS--PIAPAPKSKSGGVTDDSGSTKKAASP--SDKSGSGEKKV 240

Query: 241 GLGLVLSFGLIAISFL 247
           GLG  L   ++ + FL
Sbjct: 241 GLGFGLGLIVLCLKFL 246

[Close]

BLAST of Clc02G02400 vs. ExPASy Swiss-Prot
Match: Q9SIL7 (Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana OX=3702 GN=FLA6 PE=2 SV=2)

HSP 1 Score: 189.5 bits (480), Expect = 4.5e-47
Identity = 122/252 (48.41%), Postives = 158/252 (62.70%), Query Frame = 0


Query: 1   MASAALLLLLLLPFALFSETLAQTPAPPGP-TPAGPINITGILAQGGQFGTFIRLLNESR 60
           M+S+    ++LL F      +   P  P P T   PIN+T IL  G QF T I+LLN ++
Sbjct: 1   MSSSLFSYVVLLIFLFTIPYIQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLLNTTQ 60

Query: 61  LITQLENQLNNSQGEGLTIIAPTDNGFNALKSGALNNLDDQQKSQLLLYHVLPKFYTVTD 120
           +  Q+  QLN+S  +G+TI APTDN FN LK G LN+L  QQ+ QL+LYH++PK+Y+++D
Sbjct: 61  VGFQVSVQLNSSD-QGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSD 120

Query: 121 LQTVSNPVRTQA-----GDWGLNFTGQPNSNQVNVSTGVVTVPINNKLREQRPLCVLVVD 180
           L   SNPVRTQA     G +GLNFTGQ  SNQVNVSTGVV   INN LR+Q PL V VVD
Sbjct: 121 LLLASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVD 180

Query: 181 QVLLPEALFGNHTAAPPPKAPAPGTDKPPADGETPSKSDAANPPTNDKGAAVRNGVGLGL 240
            VLLPE LFG  T   P  APAP +    +D ++P    AA+      G++V+    LG+
Sbjct: 181 SVLLPEELFGTKTT--PTGAPAPKSSTSSSDADSP----AADDEHKSAGSSVKR-TSLGI 240

Query: 241 VLSFGLIAISFL 247
           V+SF L   S +
Sbjct: 241 VVSFALFCCSVI 244

[Close]

BLAST of Clc02G02400 vs. ExPASy Swiss-Prot
Match: Q8LEJ6 (Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana OX=3702 GN=FLA11 PE=2 SV=2)

HSP 1 Score: 170.2 bits (430), Expect = 2.8e-41
Identity = 105/230 (45.65%), Postives = 135/230 (58.70%), Query Frame = 0


Query: 10  LLLPFALFSETLAQTPAPPGPTPAGPINITGILAQGGQFGTFIRLLNESRLITQLENQLN 69
           L + F + + T  Q PA   P P+GP NIT IL + GQF  FIRLL  ++   Q+  QLN
Sbjct: 12  LFIFFLVIATTYGQAPA---PGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLN 71

Query: 70  NSQGEGLTIIAPTDNGFNALKSGALNNLDDQQKSQLLLYHVLPKFYTVTDLQTVSNPVRT 129
           +S   GLT+ APTDN FN+LKSG LN+L DQQK QL+ +HVLP   T+   QTVSNP+RT
Sbjct: 72  SSSSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRT 131

Query: 130 QAGD-----WGLNFTGQPNSNQVNVSTGVVTVPINNKLREQRPLCVLVVDQVLLPEALFG 189
           QAGD     + LN T   + NQVN++TGVV+  + N +   + L V  VDQVLLP A+FG
Sbjct: 132 QAGDGQNGKFPLNITS--SGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFG 191

Query: 190 NHTAAPPPKAPAPGTDKPPADGETPSKSDAANPPTNDKGAAVRNGVGLGL 235
           +  A     APAP      + G      D  +  + D   A R G G G+
Sbjct: 192 SSVA----PAPAPEKGGSVSKGSASGGDDGGD--STDSSDAERTGFGFGI 230

[Close]

BLAST of Clc02G02400 vs. ExPASy Swiss-Prot
Match: Q8LEE9 (Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana OX=3702 GN=FLA12 PE=2 SV=2)

HSP 1 Score: 137.9 bits (346), Expect = 1.6e-31
Identity = 95/243 (39.09%), Postives = 137/243 (56.38%), Query Frame = 0


Query: 6   LLLLLLLPFALFSETLAQTPAPPGPTPAGPINITGILAQGGQFGTFIRLLNESRLITQLE 65
           LLLL   P  L   + A  PAPPGPT     N+T IL + GQF  FIRLL  + +  QL 
Sbjct: 13  LLLLTTTPGILSQPSPAVAPAPPGPT-----NVTKILEKAGQFTVFIRLLKSTGVANQLY 72

Query: 66  NQLNNSQGEGLTIIAPTDNGFNALKSGALNNLDDQQKSQLLLYHVLPKFYTVTDLQTVSN 125
            QLNNS   G+TI AP+D+ F  LK+G LN+L D+Q+ +L+ +HV+P + + ++ QT+SN
Sbjct: 73  GQLNNSD-NGITIFAPSDSSFTGLKAGTLNSLTDEQQVELIQFHVIPSYVSSSNFQTISN 132

Query: 126 PVRTQAGD-----WGLNFTGQPNSNQVNVSTGVVTVPINNKLREQRPLCVLVVDQVLLPE 185
           P+RTQAGD     + LN T   + N VN+++GV    ++  +     L V  VD+VLLP+
Sbjct: 133 PLRTQAGDSADGHFPLNVT--TSGNTVNITSGVTNTTVSGNVYSDGQLAVYQVDKVLLPQ 192

Query: 186 ALFGNHTAAPPPKAPAPGTDKPPADGETPSKSDAANPPTNDKGAAVRNGVGLGLVLSFGL 244
            +F      PP  APAP   K     +    S   +P   D   A+RN   +   +SF +
Sbjct: 193 QVF---DPRPPAPAPAPSVSKSKKKKDDSDSSSDDSPA--DASFALRNVGSVCDAVSFCV 242

[Close]

BLAST of Clc02G02400 vs. ExPASy TrEMBL
Match: A0A1S3C1R5 (fasciclin-like arabinogalactan protein 6 OS=Cucumis melo OX=3656 GN=LOC103495639 PE=3 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 3.2e-112
Identity = 213/247 (86.23%), Postives = 228/247 (92.31%), Query Frame = 0


Query: 1   MASAALLLLLLLPFALFSETLAQTPAPPGPTPAGPINITGILAQGGQFGTFIRLLNESRL 60
           MAS ALLLLLLLPFALFS+TLAQTPA P P+P GPIN+TGIL+QGGQF TFIRLLN+SRL
Sbjct: 1   MASPALLLLLLLPFALFSQTLAQTPAAPAPSPPGPINLTGILSQGGQFSTFIRLLNQSRL 60

Query: 61  ITQLENQLNNSQGEGLTIIAPTDNGFNALKSGALNNLDDQQKSQLLLYHVLPKFYTVTDL 120
           I QL+NQLNNSQGEGLTI+APTDNGFNAL+SGALN+LDDQQKSQLLLYHVLPKFYT+T+L
Sbjct: 61  IIQLDNQLNNSQGEGLTILAPTDNGFNALESGALNSLDDQQKSQLLLYHVLPKFYTLTEL 120

Query: 121 QTVSNPVRTQAGDWGLNFTGQPNSNQVNVSTGVVTVPINNKLREQRPLCVLVVDQVLLPE 180
           QT+SNPVRTQAGDWGLNFTGQ NSNQVNVSTGVVTVPINNKLREQ PL V VVD+VLLPE
Sbjct: 121 QTISNPVRTQAGDWGLNFTGQANSNQVNVSTGVVTVPINNKLREQSPLSVFVVDKVLLPE 180

Query: 181 ALFGNHTAAPPPKAPAPGTDKPPADGETPSKSDAANPPTNDKGAAVRNGVGLGLVLSFGL 240
           ALFGNHTAAPPPKAPAPG DK P DGETP KSDAA PP NDKGAA RNGVGLGL+LSFGL
Sbjct: 181 ALFGNHTAAPPPKAPAPGADKAPVDGETPPKSDAAKPPANDKGAAARNGVGLGLILSFGL 240

Query: 241 IAISFLS 248
           I IS +S
Sbjct: 241 IVISVVS 247

[Close]

BLAST of Clc02G02400 vs. ExPASy TrEMBL
Match: A0A0A0K1Z9 (FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G039260 PE=3 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 1.0e-105
Identity = 204/247 (82.59%), Postives = 222/247 (89.88%), Query Frame = 0


Query: 1   MASAALLLLLLLPFALFSETLAQTPAPPGPTPAGPINITGILAQGGQFGTFIRLLNESRL 60
           MASAA LLLLLLPFALF +TLAQTPA PGP+P GPIN+TGIL++GGQF TFIRLLNESRL
Sbjct: 1   MASAA-LLLLLLPFALFCQTLAQTPAAPGPSPPGPINLTGILSEGGQFSTFIRLLNESRL 60

Query: 61  ITQLENQLNNSQGEGLTIIAPTDNGFNALKSGALNNLDDQQKSQLLLYHVLPKFYTVTDL 120
           ITQL+NQLNNSQG GLTI+APTDNGFN+L+ GALN LDDQQKSQLLLYHVLPKFYT+ +L
Sbjct: 61  ITQLDNQLNNSQGGGLTILAPTDNGFNSLRPGALNALDDQQKSQLLLYHVLPKFYTLIEL 120

Query: 121 QTVSNPVRTQAGDWGLNFTGQPNSNQVNVSTGVVTVPINNKLREQRPLCVLVVDQVLLPE 180
           QTVSNPVRTQAGDWGLNFTGQ NSNQVNVSTG++T PINNKLREQ PL + VVDQVLLP+
Sbjct: 121 QTVSNPVRTQAGDWGLNFTGQANSNQVNVSTGIITAPINNKLREQSPLSIFVVDQVLLPD 180

Query: 181 ALFGNHTAAPPPKAPAPGTDKPPADGETPSKSDAANPPTNDKGAAVRNGVGLGLVLSFGL 240
           ALFGNHTAA PPKAPAPGTDK P DGETP KSDAA PP NDK A  +NGVGLGL+LSFGL
Sbjct: 181 ALFGNHTAA-PPKAPAPGTDKAPVDGETPPKSDAAKPPANDKSAVTKNGVGLGLILSFGL 240

Query: 241 IAISFLS 248
           I IS +S
Sbjct: 241 IVISVVS 245

[Close]

BLAST of Clc02G02400 vs. ExPASy TrEMBL
Match: A0A5A7UY52 (Fasciclin-like arabinogalactan protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold150G00300 PE=3 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 9.7e-93
Identity = 176/203 (86.70%), Postives = 188/203 (92.61%), Query Frame = 0


Query: 45  GGQFGTFIRLLNESRLITQLENQLNNSQGEGLTIIAPTDNGFNALKSGALNNLDDQQKSQ 104
           GGQF TFIRLLN+SRLI QL+NQLNNSQGEGLTI+APTDNGFNAL+SGALN+LDDQQKSQ
Sbjct: 7   GGQFSTFIRLLNQSRLIIQLDNQLNNSQGEGLTILAPTDNGFNALESGALNSLDDQQKSQ 66

Query: 105 LLLYHVLPKFYTVTDLQTVSNPVRTQAGDWGLNFTGQPNSNQVNVSTGVVTVPINNKLRE 164
           LLLYHVLPKFYT+T+LQT+SNPVRTQAGDWGLNFTGQ NSNQVNVSTGVVTVPINNKLRE
Sbjct: 67  LLLYHVLPKFYTLTELQTISNPVRTQAGDWGLNFTGQANSNQVNVSTGVVTVPINNKLRE 126

Query: 165 QRPLCVLVVDQVLLPEALFGNHTAAPPPKAPAPGTDKPPADGETPSKSDAANPPTNDKGA 224
           Q PL V VVD+VLLPEALFGNHTAAPPPKAPAPG DK P DGETP KSDAA PP NDKGA
Sbjct: 127 QSPLSVFVVDKVLLPEALFGNHTAAPPPKAPAPGADKAPVDGETPPKSDAAKPPANDKGA 186

Query: 225 AVRNGVGLGLVLSFGLIAISFLS 248
           A RNGVGLGL++SFGLI IS +S
Sbjct: 187 AARNGVGLGLIMSFGLIVISVVS 209

[Close]

BLAST of Clc02G02400 vs. ExPASy TrEMBL
Match: A0A6J1ES00 (fasciclin-like arabinogalactan protein 13 OS=Cucurbita moschata OX=3662 GN=LOC111437189 PE=3 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 8.5e-89
Identity = 183/248 (73.79%), Postives = 208/248 (83.87%), Query Frame = 0


Query: 1   MASAALLLLLLLPFALFS-ETLAQTPAPPGPTPAGPINITGILAQGGQFGTFIRLLNESR 60
           MAS ALLLLLLLPF LFS  TLAQTPA P P+  GP+NITGIL +GGQF TFIRLLNE++
Sbjct: 1   MASTALLLLLLLPFLLFSVTTLAQTPAAPAPSSPGPLNITGILEKGGQFTTFIRLLNETK 60

Query: 61  LITQLENQLNNSQGEGLTIIAPTDNGFNALKSGALNNLDDQQKSQLLLYHVLPKFYTVTD 120
           + TQL+NQLNN+  +G+TI+APTDN FN+LK GALN L+DQ+K+QLLLYHVL KFYT+TD
Sbjct: 61  INTQLDNQLNNTP-QGMTILAPTDNAFNSLKPGALNGLNDQEKTQLLLYHVLTKFYTLTD 120

Query: 121 LQTVSNPVRTQAGDWGLNFTGQPNSNQVNVSTGVVTVPINNKLREQRPLCVLVVDQVLLP 180
           LQTVSNPVRT AGDWGLNFTGQ  +NQVNVSTGVV V +NNKLREQ PL +  V+QVLLP
Sbjct: 121 LQTVSNPVRTLAGDWGLNFTGQ--ANQVNVSTGVVMVAVNNKLREQSPLSIYAVEQVLLP 180

Query: 181 EALFGNHTAAPPPKAPAPGTDKPPADGETPSKSDAANPPTNDKGAAVRNGVGLGLVLSFG 240
           EALFG+H AAPPPKA  P ++K PADGETP KSDAA+ P + K AA RNGVGLGLVL FG
Sbjct: 181 EALFGDHPAAPPPKASGPASEKSPADGETPPKSDAAHSPADHKDAAPRNGVGLGLVLGFG 240

Query: 241 LIAISFLS 248
           LIA S LS
Sbjct: 241 LIAFSVLS 245

[Close]

BLAST of Clc02G02400 vs. ExPASy TrEMBL
Match: A0A6J1C293 (fasciclin-like arabinogalactan protein 13 OS=Momordica charantia OX=3673 GN=LOC111007613 PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 7.2e-88
Identity = 187/250 (74.80%), Postives = 202/250 (80.80%), Query Frame = 0


Query: 1   MASAALLLLLLLP-FALFSETLAQTPAP--PGPTPAGPINITGILAQGGQFGTFIRLLNE 60
           MASAA  +LLLLP F LFS+T    P+P  P P+PAGPINIT +LAQGGQF T IRLLNE
Sbjct: 1   MASAAATVLLLLPLFLLFSQTTVAQPSPAAPAPSPAGPINITAVLAQGGQFTTLIRLLNE 60

Query: 61  SRLITQLENQLNNSQGEGLTIIAPTDNGFNALKSGALNNLDDQQKSQLLLYHVLPKFYTV 120
           S+LITQLENQLNN+  +G+TI+APTDN FN LK GALN L+DQQK+QLLLYHVL +FYT 
Sbjct: 61  SKLITQLENQLNNTP-QGMTILAPTDNAFNNLKPGALNGLNDQQKTQLLLYHVLTQFYTS 120

Query: 121 TDLQTVSNPVRTQAGDWGLNFTGQPNSNQVNVSTGVVTVPINNKLREQRPLCVLVVDQVL 180
           T+L TVSNPVRT AGDWGLNFTGQ   NQVNVSTGVVTVPINNKLREQ PL V  VDQVL
Sbjct: 121 TELLTVSNPVRTLAGDWGLNFTGQ--GNQVNVSTGVVTVPINNKLREQSPLSVFEVDQVL 180

Query: 181 LPEALFGNHTAAPPPKAPAPGTDKPPADGETPSKSDAANPPTNDKGAAVRNGVGLGLVLS 240
           LPEALFGN TAAP PKAPAPG DK PADGE   KSDAA PP+ DKGAAVRNGVGLG V  
Sbjct: 181 LPEALFGNKTAAPAPKAPAPGADKAPADGEPQPKSDAAKPPSGDKGAAVRNGVGLGFVSG 240

Query: 241 FGLIAISFLS 248
           F  I IS  S
Sbjct: 241 FVFIVISVFS 247

[Close]

BLAST of Clc02G02400 vs. TAIR 10
Match: AT5G44130.1 (FASCICLIN-like arabinogalactan protein 13 precursor )

HSP 1 Score: 202.2 bits (513), Expect = 4.8e-52
Identity = 129/255 (50.59%), Postives = 158/255 (61.96%), Query Frame = 0


Query: 1   MASAALLLLLLLPFALFSETLAQTPAPPGPTPAGPINITGILAQGGQFGTFIRLLNESRL 60
           MA+  LLLLLL    L +E  AQ  A P P PAGPINIT IL +GGQF T IRLLN    
Sbjct: 1   MATTPLLLLLLTAVFLSTEITAQR-AAPAPGPAGPINITAILEKGGQFVTLIRLLN---- 60

Query: 61  ITQLENQLN---NSQGEGLTIIAPTDNGFNALKSGALNNLDDQQKSQLLLYHVLPKFYTV 120
            TQ+ NQ+N   NS  EG+T++APTDN F  LK G LN L    + +L+LYHV PKFYT+
Sbjct: 61  TTQIGNQINIQINSSSEGMTVLAPTDNAFQNLKPGTLNKLSPDDQVKLILYHVSPKFYTL 120

Query: 121 TDLQTVSNPVRTQA------GDWGLNFTGQPNSNQVNVSTGVVTVPINNKLREQRPLCVL 180
            DL +VSNPVRTQA      G +GLNFTGQ   NQVNVSTGVV   ++  LR++RPL V 
Sbjct: 121 EDLLSVSNPVRTQASGRDVGGVYGLNFTGQ--GNQVNVSTGVVETRLSTSLRQERPLAVY 180

Query: 181 VVDQVLLPEALFGNHTAAPPPKAPAPGTDKPPADGETPSKSDAANPPTNDKGAAVRNGVG 240
           VVD VLLPE +FG    +  P AP P +  P    ++ S   AA P  ++K  +     G
Sbjct: 181 VVDMVLLPEEMFGERKIS--PMAPPPKSKSPDVSDDSESSKKAAAPSESEKSGSGEMNTG 240

Query: 241 LGLVLSFGLIAISFL 247
           LGL L   ++ + FL
Sbjct: 241 LGLGLGLVVLCLKFL 246

[Close]

BLAST of Clc02G02400 vs. TAIR 10
Match: AT1G03870.1 (FASCICLIN-like arabinoogalactan 9 )

HSP 1 Score: 192.2 bits (487), Expect = 5.0e-49
Identity = 125/256 (48.83%), Postives = 158/256 (61.72%), Query Frame = 0


Query: 1   MASAALLL--LLLLPFALFSETLAQTPAPPGPTPAGPINITGILAQGGQFGTFIRLLNES 60
           MA+  L L  LLL+   L +      PA P P PAGPIN+T IL +GGQF TFI LLN  
Sbjct: 1   MATTRLTLAPLLLIAAVLLATKATAQPAAPAPEPAGPINLTAILEKGGQFTTFIHLLN-- 60

Query: 61  RLITQLENQLN---NSQGEGLTIIAPTDNGFNALKSGALNNLDDQQKSQLLLYHVLPKFY 120
             ITQ+ +Q+N   NS  EG+T+ APTDN F  LK G LN L    + +L+LYHV PK+Y
Sbjct: 61  --ITQVGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQLSPDDQVKLILYHVSPKYY 120

Query: 121 TVTDLQTVSNPVRTQA-----GDWGLNFTGQPNSNQVNVSTGVVTVPINNKLREQRPLCV 180
           ++ DL +VSNPVRTQA     G +GLNFTGQ  +NQ+NVSTG V   I+N LR+QRPL V
Sbjct: 121 SMDDLLSVSNPVRTQASGRDNGVYGLNFTGQ--TNQINVSTGYVETRISNSLRQQRPLAV 180

Query: 181 LVVDQVLLPEALFGNHTAAPPPKAPAPGTDKPPADGETPSKSDAANPPTNDKGAAVRNGV 240
            VVD VLLP  +FG H  +  P APAP +       ++ S   AA+P  +DK  +    V
Sbjct: 181 YVVDMVLLPGEMFGEHKLS--PIAPAPKSKSGGVTDDSGSTKKAASP--SDKSGSGEKKV 240

Query: 241 GLGLVLSFGLIAISFL 247
           GLG  L   ++ + FL
Sbjct: 241 GLGFGLGLIVLCLKFL 246

[Close]

BLAST of Clc02G02400 vs. TAIR 10
Match: AT2G20520.1 (FASCICLIN-like arabinogalactan 6 )

HSP 1 Score: 189.5 bits (480), Expect = 3.2e-48
Identity = 122/252 (48.41%), Postives = 158/252 (62.70%), Query Frame = 0


Query: 1   MASAALLLLLLLPFALFSETLAQTPAPPGP-TPAGPINITGILAQGGQFGTFIRLLNESR 60
           M+S+    ++LL F      +   P  P P T   PIN+T IL  G QF T I+LLN ++
Sbjct: 1   MSSSLFSYVVLLIFLFTIPYIQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLLNTTQ 60

Query: 61  LITQLENQLNNSQGEGLTIIAPTDNGFNALKSGALNNLDDQQKSQLLLYHVLPKFYTVTD 120
           +  Q+  QLN+S  +G+TI APTDN FN LK G LN+L  QQ+ QL+LYH++PK+Y+++D
Sbjct: 61  VGFQVSVQLNSSD-QGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSD 120

Query: 121 LQTVSNPVRTQA-----GDWGLNFTGQPNSNQVNVSTGVVTVPINNKLREQRPLCVLVVD 180
           L   SNPVRTQA     G +GLNFTGQ  SNQVNVSTGVV   INN LR+Q PL V VVD
Sbjct: 121 LLLASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVD 180

Query: 181 QVLLPEALFGNHTAAPPPKAPAPGTDKPPADGETPSKSDAANPPTNDKGAAVRNGVGLGL 240
            VLLPE LFG  T   P  APAP +    +D ++P    AA+      G++V+    LG+
Sbjct: 181 SVLLPEELFGTKTT--PTGAPAPKSSTSSSDADSP----AADDEHKSAGSSVKR-TSLGI 240

Query: 241 VLSFGLIAISFL 247
           V+SF L   S +
Sbjct: 241 VVSFALFCCSVI 244

[Close]

BLAST of Clc02G02400 vs. TAIR 10
Match: AT5G03170.1 (FASCICLIN-like arabinogalactan-protein 11 )

HSP 1 Score: 170.2 bits (430), Expect = 2.0e-42
Identity = 105/230 (45.65%), Postives = 135/230 (58.70%), Query Frame = 0


Query: 10  LLLPFALFSETLAQTPAPPGPTPAGPINITGILAQGGQFGTFIRLLNESRLITQLENQLN 69
           L + F + + T  Q PA   P P+GP NIT IL + GQF  FIRLL  ++   Q+  QLN
Sbjct: 12  LFIFFLVIATTYGQAPA---PGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLN 71

Query: 70  NSQGEGLTIIAPTDNGFNALKSGALNNLDDQQKSQLLLYHVLPKFYTVTDLQTVSNPVRT 129
           +S   GLT+ APTDN FN+LKSG LN+L DQQK QL+ +HVLP   T+   QTVSNP+RT
Sbjct: 72  SSSSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRT 131

Query: 130 QAGD-----WGLNFTGQPNSNQVNVSTGVVTVPINNKLREQRPLCVLVVDQVLLPEALFG 189
           QAGD     + LN T   + NQVN++TGVV+  + N +   + L V  VDQVLLP A+FG
Sbjct: 132 QAGDGQNGKFPLNITS--SGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFG 191

Query: 190 NHTAAPPPKAPAPGTDKPPADGETPSKSDAANPPTNDKGAAVRNGVGLGL 235
           +  A     APAP      + G      D  +  + D   A R G G G+
Sbjct: 192 SSVA----PAPAPEKGGSVSKGSASGGDDGGD--STDSSDAERTGFGFGI 230

[Close]

BLAST of Clc02G02400 vs. TAIR 10
Match: AT5G60490.1 (FASCICLIN-like arabinogalactan-protein 12 )

HSP 1 Score: 137.9 bits (346), Expect = 1.1e-32
Identity = 95/243 (39.09%), Postives = 137/243 (56.38%), Query Frame = 0


Query: 6   LLLLLLLPFALFSETLAQTPAPPGPTPAGPINITGILAQGGQFGTFIRLLNESRLITQLE 65
           LLLL   P  L   + A  PAPPGPT     N+T IL + GQF  FIRLL  + +  QL 
Sbjct: 13  LLLLTTTPGILSQPSPAVAPAPPGPT-----NVTKILEKAGQFTVFIRLLKSTGVANQLY 72

Query: 66  NQLNNSQGEGLTIIAPTDNGFNALKSGALNNLDDQQKSQLLLYHVLPKFYTVTDLQTVSN 125
            QLNNS   G+TI AP+D+ F  LK+G LN+L D+Q+ +L+ +HV+P + + ++ QT+SN
Sbjct: 73  GQLNNSD-NGITIFAPSDSSFTGLKAGTLNSLTDEQQVELIQFHVIPSYVSSSNFQTISN 132

Query: 126 PVRTQAGD-----WGLNFTGQPNSNQVNVSTGVVTVPINNKLREQRPLCVLVVDQVLLPE 185
           P+RTQAGD     + LN T   + N VN+++GV    ++  +     L V  VD+VLLP+
Sbjct: 133 PLRTQAGDSADGHFPLNVT--TSGNTVNITSGVTNTTVSGNVYSDGQLAVYQVDKVLLPQ 192

Query: 186 ALFGNHTAAPPPKAPAPGTDKPPADGETPSKSDAANPPTNDKGAAVRNGVGLGLVLSFGL 244
            +F      PP  APAP   K     +    S   +P   D   A+RN   +   +SF +
Sbjct: 193 QVF---DPRPPAPAPAPSVSKSKKKKDDSDSSSDDSPA--DASFALRNVGSVCDAVSFCV 242

The following BLAST results are available for this feature:

BLAST of Clc02G02400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887446.1	2.3e-112	88.66	fasciclin-like arabinogalactan protein 13 [Benincasa hispida]	[more]
XP_008455488.1	6.6e-112	86.23	PREDICTED: fasciclin-like arabinogalactan protein 6 [Cucumis melo]	[more]
XP_004144519.1	2.1e-105	82.59	fasciclin-like arabinogalactan protein 13 [Cucumis sativus] >KGN43478.1 hypothet...	[more]
KAA0059126.1	2.0e-92	86.70	fasciclin-like arabinogalactan protein 6 [Cucumis melo var. makuwa] >TYK21631.1 ...	[more]
XP_022930821.1	1.7e-88	73.79	fasciclin-like arabinogalactan protein 13 [Cucurbita moschata] >KAG6589141.1 Fas...	[more]

BLAST of Clc02G02400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFH6	6.7e-51	50.59	Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]
Q9ZWA8	7.0e-48	48.83	Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=FLA9...	[more]
Q9SIL7	4.5e-47	48.41	Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana OX=3702 GN=FLA6...	[more]
Q8LEJ6	2.8e-41	45.65	Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]
Q8LEE9	1.6e-31	39.09	Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]

BLAST of Clc02G02400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C1R5	3.2e-112	86.23	fasciclin-like arabinogalactan protein 6 OS=Cucumis melo OX=3656 GN=LOC103495639...	[more]
A0A0A0K1Z9	1.0e-105	82.59	FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G039260 PE=3 S...	[more]
A0A5A7UY52	9.7e-93	86.70	Fasciclin-like arabinogalactan protein 6 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A6J1ES00	8.5e-89	73.79	fasciclin-like arabinogalactan protein 13 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1C293	7.2e-88	74.80	fasciclin-like arabinogalactan protein 13 OS=Momordica charantia OX=3673 GN=LOC1...	[more]

BLAST of Clc02G02400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G44130.1	4.8e-52	50.59	FASCICLIN-like arabinogalactan protein 13 precursor	[more]
AT1G03870.1	5.0e-49	48.83	FASCICLIN-like arabinoogalactan 9	[more]
AT2G20520.1	3.2e-48	48.41	FASCICLIN-like arabinogalactan 6	[more]
AT5G03170.1	2.0e-42	45.65	FASCICLIN-like arabinogalactan-protein 11	[more]
AT5G60490.1	1.1e-32	39.09	FASCICLIN-like arabinogalactan-protein 12	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 54..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..223
None	No IPR available	PANTHER	PTHR32077:SF54	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 6	coord: 5..246
IPR000782	FAS1 domain	SMART	SM00554	fasc_3	coord: 77..180 e-value: 3.5E-19 score: 79.7
IPR000782	FAS1 domain	PFAM	PF02469	Fasciclin	coord: 47..179 e-value: 4.7E-19 score: 68.9
IPR000782	FAS1 domain	PROSITE	PS50213	FAS1	coord: 35..177 score: 16.832211
IPR036378	FAS1 domain superfamily	GENE3D	2.30.180.10	FAS1 domain	coord: 18..180 e-value: 9.8E-18 score: 66.8
IPR036378	FAS1 domain superfamily	SUPERFAMILY	82153	FAS1 domain	coord: 28..180
IPR045003	Fasciclin-like arabinogalactan protein, group A	PANTHER	PTHR32077	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN	coord: 5..246

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc02G02400.1	Clc02G02400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009834	plant-type secondary cell wall biogenesis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane